TCONS_00003953 (transcript) - C. hemisphaerica

Overview
NameTCONS_00003953
Unique NameTCONS_00003953
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2792

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00003953 ID=TCONS_00003953|Name=TCONS_00003953|organism=Clytia hemisphaerica|type=transcript|length=2792bp
caaaggaaatttttgactttttctcacTTTAGAAATGATAATTAAcgtca
taaaaaaagtttttcgtcaaaagttatgattaatccttaaaaacagtgtt
ttccagtgttttttcagccagaaacagctgttttgtccagtttttgcgct
ttcggaagctcaatatctcgagttaggtactgaaatcacctatacttgca
atatatcactaatcttaattttttgaaagctttccaaaaatatacaacag
gtctccgttttctcaagctgaaattttcattaatttttcacccaatgatt
tttgcccgagaccgtcgtatttgtccgaaaatcacaccaaagtgtttgaa
acaaaattggcacccaagttattttgattcccctaccccttagctttcca
aaaatgtataacaagtgctttgactaaaaaaatcgagcaacctcaaaaaa
acgaacaaatttccccctactattaccTTAAATGagttgtgtgccaaatt
tcattttaaaaaaacCAACTTATTCAAAATTTAAGGGGTGGTCCAAaacc
ccccctagttctgaacctcCCCTAAAAGCCCATAGGGTTAGGGAAACGTT
TGATAATCAATGAATTATTATATATTATCTTTGATTATTCTATCTTCAAT
CTTTTGAGTTGATGCTCTCATACACAATCAATACtgaattttattgttaa
ttgaGCTGTTGAGCGAAACAtatagtttttttgttttttttgagtAAACA
ATAAATACAATATACATACTATTTATTAACTAGAAATTAGAATAACAATT
CTCATCACGATGAATGAGCAAAGatattttttgaATCCTGAATCAGTTAG
CAAACATTTATTCTGTTCAATTTGTCAAGATGTCTACAATGAACCACAAA
GAGCGCCATGTGGGCATAGCTTTTGCAAAGAGTGCATTTTTCGATGGTTG
AGTCAGAGCAAGACATGCCCAGAAGATAGGAGAACGGTCACAAAGAAAGA
TTTGCATTACGATTTTATCTTGGCGAACATTATAGGGGACCAAATGGTTG
CTTGTCCTTTCCGATCAAGAGGCTGCGTACATGTCGGAAAGCTTGAATTA
CTGGCAACTCATCGAAAGAATTGTACATTCAATCCGATTAATCTACCGGA
CTTCATGAAAGAAGATGCGAAAAATTCCACTGTCAATTCAGCTGgcaATT
GTTCGAATATGAATAGTGATAGCGACGACGATGATGATAAACTACCCACA
CCAGCTAAACCATCATTGAAAATGAGATTGTTTTGTGACGAGAACAAACG
AGAACTATTACGATCAGTTTTCGAAAAGAATTCACCGAAAGACTCCACTT
CTGCGTCATCTTTTTCTTCCAATCGAAATCAATGGTTAGGGAAAAAGCCC
AAGGGCAGTAAAGAAAATAAACGACCAAGAGTGATTACTATAGATGATTC
ATTCTGATTGGTGATTCATTCTGATTATTGATTTTTCGTGGTGAAGTCCT
CTTCATGCATCAGGCTCTCAACAACATTTGCTACTCTCTGGCCTCTATTG
GCGGTGGAAATGTGAAGATCGAACATTGAAAGAGAATGAACCACCCTGGG
TGACCACTATAGATGATTCATTCTGATTGATGATTTTTCGTGGTGAAATC
CTCTTCATGCATCAGGCTCTCAACAACATTTGCTACTCTCTGGCCTCTAT
TGGCGGTGGAAATGTGAAGATCGAACATTGAAAGAGAATGAACCACCCTG
GGTGACCACTATAGATGATTCATTCTGATTGATGATTTTTCGTGGTGAAA
TCCTCTTCATGCATCAGGCTCTCAATTTGCTACTTTCTGGCCTCCATTGC
CTGTGGAAAGAGAAAACCCGTAAGGTAGTAAAGTAAAGGAAACGAATGAT
CAAGAGTGGTCGTTATAAAACCACCTTTGGCCCTGAGGCAATGAATGACC
CAGAATGATCCTTATAAAACCACCATTGGCCATGGGGCAATCAAAGAAAG
ATTATCACTATCTTAACTTATTCTTCGAATCAAAATCAGTTATTGGGGGA
AAGTGGATTAATACAATgagtagaaaataaaataatgataaaCACAGAAC
ATAGACCTGGAAATGAGAACTTAACAACCTGACCGTGATTGGTGATTTAT
TTTGCATTCCTCTGAATGTATTCGGTTATCTTTTGGATTGAGTTgtacac
tcccttctcacagactcggtaggattcttttagccagtggggataaaaat
aacggactgaaactcgatggagatTAATATTCTCATATGTTTTATGaccg
gggatttaaattcttttgttttcaagtcagaaagttCAGTAGGGAtagga
aaaatagtaaatattctgcagcgaggattggtttatttgattattttcag
tggggacaaaaattggaggataatttttcaccggagacgatattttggcc
aatttttccactgGGAAGGGctcctagtgggtctgtgagaagggggttta
GTTTTGATGGGAAAAAAGATTTAACATTGTTGGTATTAGTAAATAATTgg
tatttaaactttttaaatgatTGAACGAAATGATATCACTAACCTTGAAA
GAATATGGACGCCTGTTCGCCTTTATCCTCGTCTTTTTCAAATTGATTAA
CAAAAGTTCGGCTTGATTCTGGTTCATCAGCAATGATTGATATTATACTC
CAATGGTTTTCTAAAATAAACTTGTTTTGTCATGGTTTTTTGACATTCAT
ATTTTTGGTATTCTACGTGAGCAAAGTTTTAAATCGTTGTAT
Run BLAST on NCBI

transcript from alignment at sc0000038:677204..694240-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00003953 ID=TCONS_00003953|Name=TCONS_00003953|organism=Clytia hemisphaerica|type=transcript|length=17037bp|location=Sequence derived from alignment at sc0000038:677204..694240- (Clytia hemisphaerica)
CAAAGGAAATTTTTGACTTTTTCTCACTTTAGAAATGATAATTAACGTCA TAAAAAAAGTTTTTCGTCAAAAGTTATGATTAATCCTTAAAAACAGTGTT TTCCAGTGTTTTTTCAGCCAGAAACAGCTGTTTTGTCCAGTTTTTGCGCT TTCGGAAGCTCAATATCTCGAGTTAGGTACTGAAATCACCTATACTTGCA ATATATCACTAATCTTAATTTTTTGAAAGCTTTCCAAAAATATACAACAG GTCTCCGTTTTCTCAAGCTGAAATTTTCATTAATTTTTCACCCAATGATT TTTGCCCGAGACCGTCGTATTTGTCCGAAAATCACACCAAAGTGTTTGAA ACAAAATTGGCACCCAAGTTATTTTGATTCCCCTACCCCTTAGCTTTCCA AAAATGTATAACAAGTGCTTTGACTAAAAAAATCGAGCAACCTCAAAAAA ACGAACAAATTTCCCCCTACTATTACCTTAAATGAGTTGTGTGCCAAATT TCATTTTAAAAAAACCAACTTATTCAAAATTTAAGGGGTGGTCCAAAACC CCCCCTAGTTCTGAACCTCCCCTAAAAGCCCATAGGGTTAGGGAAACGTT TGATAATCAATGAATTATTATATATTATCTTTGATTATTCTATCTTCAAT CTTTTGAGTTGATGCTCTCATACACAATCAATACTGAATTTTATTGTTAA TTGAGCTGTTGAGCGAAACATATAGTTTTTTTGTTTTTTTTGAGTAAACA ATAAATACAATATACATACTATTTATTAACTAGAAATTAGAATAACAATT CTCATCACGATGAATGAGCAAAGGTAAAGTCCTCCTGGTATTGGGCTCTT CCAGAAAAAAATTGAATTTAGGGGGTGGAGGAGGATATGATTATGACATT TTTTTGGAAATTAACTACCCAGACATTGTGACTTTTGACCCCCCAGACAG CATGTCTAACCCCTCGGACAAGCATTAGTTGACCCCATGGACAGTCAAAA TTACTCTCAAACAGAGCAAAACTAAAAAAGGAAGTTTAACCCCGGACAAG GCAAGTTTTGTAGATTTTTACTACCCCTACTAAATCCTACACCCTCATAT ATACAGACATTTTCTGGAGGAGCCCATTATTTGAATTTTTCTTTCTATAG AACAAAATTAGAATCCTCTAAATCAGAACAGACAATTCTTTTTACACTTT GACTTTTTAAGGATGGTTATATAAATAGGGATAGAGGGTAATGATTATTT CGAACATTTAGCATTTACAGAAAGAAATGACTACTAGGCAATAATGTATT CAGATTTTCCGTGTTTTTCAGCCAGAAACAGCTATTTTGTCCAGTTTTTG CGCTTTTTGAAGCTCAATATCTCGAGTTAGGTACTGAAATCACCTATACT TGCAATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNTGTTTTCTCGAGCTAAAATTTTCATTAATTTTTAACCATATGA TTTTTGCCTGAGACCGTCATATTTGTCCGAAAATCACACCAAAGTGTCCG AAAAAAAATTGGAAACATAGTAATTTCGATTCCCCTACCCCTTAGCTGTG CTTCTAACAAAACAGTCGAGCGATTTTACAAAATGCCCTCTACTATACCA TCGAAAATGAAATATTTGATAAATGTTTTTAATTGAATGATCCTGTATAT TTTTTCAGATATTTTTTGAATCCTGAATCAGTTAGCAAACATTTATTCTG TTCAATTTGTCAAGATGTCTACAATGAACCACAAAGAGCGCCATGTGGGC ATAGCTTTTGCAAAGAGGTATGATAAATCTGATTGATGTTGGGTCCATTA ATTTTAGGGAGTGGTCAGAAAGTATCTACTAGGGTGGGTTTGCAGGGGGG GGTCAAGATCCAGATACCAAACCCAGGGCCGGGGGGTGGTGTCAATTTTT TTTTTCAAATTTCAAAAAGTCAAGTTGGTATTGATACCAAAATGAGGGGG TGGGGTCCCCTTTTTTTGAAAATTAGGGAATCTTTAAGTTGGTATCGATA CCAAAATGAGAGGTTGGGTCCCCCTTTTTTTANNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNGTGGTACATAATATAAGTGATTGATAAGAGG AATGTTCTTTGAATAAAAACATCCACAGATTTTGTTTAGCATCCCTTGTA TGCAGTATCCTATGCATATAACTCCTTGCATTTTTACTGATTGCCAATTT AGGGGGGGGGTCCCCCTTTTTCAGAAAAATCGGGATTTTCAAGTTTGTAT CGATACCAATTTAGGGGGGTGGGTCCCCCCTTTTTCAGAAAATTGGAGTT TTCGAGTTGGTATTGATACCAATTTAGGGGGTGGTGGTGTCTACTACTTT CAAATCTCGAAAAGTCAGGTTTTTGGGCCCTGGGTTGGTATCCTGGACCC TGACCCCCCCCCTGGGGTTTGAGGACATTTTCAAAAATACCAAAAAAATT CACACCCTTCCCTTGATATACTCAAAACAATTTCAAGCCCCTACTAATAT AGGCCACCTCTCAAAACGTATGATTTGAGGTTACAATAATAGCAGCTGCT AGAGGCGTTCTGGCATCCTGGAATCCTCCACCCCCTCCCTAGTAGATACT TTTTAACCACTCCCTTACCATCATCAAAGGGAGACTCAAATATCGATCTG TTTCGATTTTCAATATTTACTACTTTCTGTAAAAAAGTGGACCCAAATAA AACAGTGGTACGATTAAGGAAGTTAATCGATTAATTTGATTTGCATGGAT CTCCATGTTTAAAAAAAGAGACAGTGAAGGCCAAATGCTTAAATTCTCTT CTTTGAAATTCTATGAAATGCAAAAAGGTAAAAAGGTGGCCCACATCAAG CATAGTTAGTTAGCTCTTATTTGCAAAACTTTCTTATGGCTATGGTTCAT GGAAAGAATACATGTGAACGATACGAGTTTATACTAATAATGAAAAAGTA AATCGTGTAATTGAATCGTGTATGAAAAAAAACTAAAAACTTTTTATTTT GCCACTGTTGTTGATGTTCGATCTGTTATCTCGATTTTTCTTGTTTCTTT GTTTTAGTGCATTTTTCGATGGTTGAGTCAGAGCAAGACATGCCCAGAAG ATAGGTATTTACTATTTTCTCCTGGTTCAGAGAAATCTTAGGAAGAGCCT GGAAGAGCGTGAAAATAAAATGTTTCTTGGTTAGATACAGGAACCGTGAG CGTAAGGTTGAAATCTTTAAAAAAATTTAATCAACTCTTTTTTTTATAAG CGTACGGGAAAATCGGGTCGATGCTCAATATGCTTGGGAAAATCTCATTT TCAGCCTTAATTTATGCTTTAAACACATGGATAATCATCAGTGGTTTGGC TCAGTCAGATAGATAACTTTTCACTCAACTGCAACAGCAATTATTTATAT ACTTTTCAGCAAGAGCAGGCAACAGGGACTTTTCCAGAAATGATCTCGTG TTATTATGGTTTTTAATAAAATACTTTGTATGTGAGAAAACAAAGACAGT AAAAACCGCTTTTTAATATTTCTATTATAGGAGAACGGTCACAAAGAAAG ATTTGCATTACGATTTTATCTTGGCGAACATTATAGGGGACCAAATGGTT AGCCATTTTTAGGTTGCTTTTCCGAAAGACACTCTTTTTTCNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNAAAACTAGAGTTGAACAAACTGAATCAAGTCTTAGCAGATCTTAGATC TTTTTTAGTCGTGATAAAATTTTTCTGTACATAACGTTCATCATACAGGC TATGTAACAAAGACTTAAGGCGTGCCTAATACAATGAGTTTTTTTATCTA GTCTAGTTTATCAACTAGCCCGGGGGGGGGCAGTGGGTTTCCCAACTGAC GGTATGTGCGTCGAAAAAATGGCTTTTAGAATCGCACCCTTACAGTGCAG AAAAAAATCGGTGAAATTCATACCCTTTTCAAATTTTAGACTCTTTTAGA GCAAAAAAATCTAGATTTTCGAGCCAAAATTTGCAATTTTTCCTAGATTT GCTGAAATTTCCACCCACCCAGTGCATTTATCAAAAGTCCACCTTTACAG TGCATTTCTGATATTTTGAAAAACATACCCTTAACCGCCGCACATACCGG TCGGTCAATTTGCCTGACTGTCCTCCCCCCGGGTCAACTAGTTTTATGAA CTCGATACATTTTGCCAATTTAGTTCCAGAAACTTTATTTACGTTGTGTT AGAATGAGAAAAACTTGTTTTCATTTTCAGGAGTCTAAAGTGTGGTACAT AATATAAGTGATTGATAAGAGGAATGTTCTTTGANNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNGAAAATCTCATTTTCAGCCTTA ATTTATGCTTTAAACACATGGATAATCATCAGTGGTTTGGCTCAGTCAGA TAGATAACTTTTCACTCAACTGCAACAGCAATTATTTATATACTTTTCAG CAAGAGCAGGCAACAGGGACTTTTCCAGAAATGATCTCGTGTTATTATGG TTTTTAATAAAATACTTTGTATTTGAGAAAACAAAGACAGTAAAAACCGC TTTTTAATATTTCTATTATAGGAGAACGGTCACAAAGAAAGATTTGCATT ACGATTTTATCTTGGCGAACATTATAGGGGACCAAATGGTTAGCCATTTT TAGGTTGCTTTTCCGAAAGACACTCTTTTTTCTTTAAAGCATTCGGAAAA ATCAGATCGAGGCTCAATGTGCTTATTAGGAAAATCTCTTTTTCAGCCTT AATTTATGTTTATTTACTTACTTAGGCTTTGATTTGTTGATTTTCTTTGG GTTCATGAAAATTTCGAATTTTTAAGTCAAAACATTGATTCGGTTCAAAG AATGAAAGTTTTCTTTTTGTGATTTGGCGCTGCAGGTGAAAATCTTTGGT CTAAGAAAGCTCAAACAGCTTTAAAAGTAACCTTAAAAAGGTCAGCGTTT TAGAAAAGCTGCACGATTATTATTTCATTTCAACTTGGAGGTATGCTTGG CATTATGCTTATTTTTTACTGAATTTGAGCCTGAGTATGCTTATAAACGT TATGCTTATAAAAAAAGAGTATACACTTGCCAACCATGGTTTGGGTTTAT GAAAAAACTACCAAACTCTGGGTTGAAAAAACCATGAGGTTAATTGAATT TGATTTGTATTACATAAAAAATTGTATATTGTATTCATTGATGATAATTA ATAAATCGAGGCTATATACAATGAGCAATGAGCAGTGTTTTACAGTACTC GATACATATGGAAGTAAGGAAGAAAAGACACTTTTTTCCGCTACTGTTAG TTTCATGCCACTTTGGTGTCGATCTGCCTGGATTCTTCCTTACTGCTATT GATAAAAATATACTTTTACATTACTACGATGTAGGTTGCTTGTCCTTTCC GATCAAGAGGCTGCGTACATGTCGGAAAGCTTGAATTACTGGCAACTCAT CGAAAGAATTGTACATTCAATCCGATTAATCTACCGGACTTCATGAAAGA AGATGCGAAAAATTCCACTGTCAATTCAGCTGGTATGTACACATTTTATT TTATACAAACTGGGAATGACTTTTGTTGTTTTTTGTTTTTTATCACAACT TTTTTTCACAGCTTTGGTGATATTTTCTACTTTATTGTCATTCGGGCTTG AAGGTCGCCGGGTTATTTAAAAGCGGTACTACCTACTGCTTTCTTCACAA GGATTCAATTCAACTTCTAAGATTACATAATCTCTCAACAAAAAATCCCT TTCAATTTTAACGCTCGTATCAATAGGTAATTGCTTCTTCTTAGCCTCTT CCGTCCAATTAAGGAGACAAATGTTTTTCAAACCACTTGGTATCCATAAA GCAATCCATAGATCTTTTTCATCCGTTGATAAATTACAAGCTGTGTCATA TTCTGCCGTGATCTGACAAAAGGAAGTAACTGCATTTTTCCTATTTTGAG ATAATTGCATAAACGAGGTTGACCTTATTCAAGATCAATGGTATCGTTTT AAGATCAAAACTTTTGCTGATTGTGAAAGACCAAACCCTAGAATAGTATA ATATTTAAAAGGAAGGAGTTAAAAGAAGTTTTAACATCTTGATTTTGGAA AAATCCAGACAAGTTTTACTCTACTCAAGCTCTTTCAAGCTTAAAATTTT AGAGTTACTTCTTTTTGTCAGAAAATAAACTGCAAAATATTGCAAGCAAC TTTAATTTTTCAGGCTATAAAAAGAAGTAAGTGACTTACTTCCTTTTGTC CGAAAATAAAATGAAACTTTAGTCCAAAAAAATTGATAAAAAGAAGTCTT TTACTAGAAATCAACTACTGGAAAACACAAGCTGGACTCTTAGGAGTTGA TTTTTGCAAAAATATGAATTTTCAAAAATTGATGGTTACTTCCTTTTGTC AGATCACGGCAGTTTCATATTTGCACCATTTCTCTCGACTTGTCGCCTTG TTGAAAACTTCAACATCGTTGTATATTTTAACACCTATTCGATCCCTAGC GTATCCATAAAACTTGATATATTTCTCTAAAAATTCACCAGGCTGCATCT TGTCGGACATGCGCACAAGCCTTTGAGACCATGTTATACCGTATATAACA TCACTGTACAGCACCATTATTTTATTCAATCTTTGAAGTAACTGACATTC CTCTTGATTCTCGTTTTTCAATCCTTCAATTACTGCGTGGCAAGATTTAA GCTCTTTCCCATTTTGATCAAGGTCGGCCTGTTTAAATACATACAGAGTA AATTTGTTGTCAAATACACGGTGCTGTGCCAAGAAATTATTTAGCAAACA CAATCTGTCGCAAAATGTTTGGAGGTCACATAGATCCTTCGCCCGGTTTT TAAAATCATGACATAACTGTCTCAATGCACTCGTAAGATCATTCGTTACC GTCTCTTCTACCGTATCCAACTTTTTTGCCACACTATCTAAATCTTTTTT TATCAGTTTCGTGATGGTGCCGTTAATTTCTGCCTTGGTCAATTGTTCAC ATGCCTGGTCAACTCTTAGGTTCTCAGCATCAATTCTTCCACTAAGGGCA AGATTTTCTTTTAACAATACTTTCTTCTCGTTTGTTGCGATAGCTTTCGA TTGAGCATCGATCTTGGTTTTCATAGCAATATTCGTTTTCGTTACGGTTT CAATGTCCTTAGCATTTTGCTTTACTGTCTTCTGTAAGTCAGCAATTTGT TGGCTTTGCGTATCAATCGTATGTTGATACTTGACTCGTTCTTGGCTGAA AAGACTGAGAGACTTTAGGACTAGAATATCATGGGTAGATTTTTCGGATA CCATATGTGTTTGTAGCTCTCTGCGTTTGACCTGAAAAGCCATGAGATTT GTTTGAAGTGCTGGTAGAGAGAATCTTTGTAAAATTGGAAATTTCTCGTC AGTAAAAAGTGGGCAAAGACTCTAGTGAAGTTTAGATGGCTATGATCTAT TAATTACAGTGTGACCATAGAAAAAAGTATATAATATAGAATATAACTCA AAATCCTCAAAACTCCTCAAGTTCGAAGTGATCATTAATTTAGAAGACGA AAACTCGAAAAAAAATCCCATATTGCACTCGGTACCGTGCGATAACTATT GCTTATCCTTCATAAGTCATAATAAGCAGAAATAAACAGTTCCAACAAAT TGGGGATGAGCTAGAGTTTTTACAAGATACTTCACTAATTGGTCATTTAA AGTGATAGAGATGACGCGTTCTTTAGAAAAAGTAATAAGATTCTTTTATT ACATCTTAACGACCAACCAAATCAAATAAGAGCTTGTAAAAACTCCAGCT TGTCCCACAAATTGAATGCTTTAGATATTTTGTATTACTACAATTAAGTT AAATTAAAAGTTAAAAAAAATTGTCATTACCTTAGCGAAACACCCAATTT CAGCAAGGGCATGGTATTATCAAGAAATCGCATTTCATCTCGTGTTCCTG TGTTAATAAATAGGAAGAGTTATGCTTAAGAACTTCATGATCAAGGAGGC CACTCAAGCGGTAAGTCTGATCACGATATCACGCAATTTTTTGTGTTCGA TCACGATCACACAAATTCAGCAAAACATTTTGATAATCATGCATCCCTTT GAAAAAGTCCAAATCACGCATCACGGCTCAAAAATCTTTCAAATCACGAT CACGTTTTGACCTCTGATCACGCAATCACGAAAATAAAAATTCTAAATCG CGTAATAACGCTTGAAAAAAGTCCCTATCACAATTTTTTTCACCAAAACT GTTTGGAGGGCCTCACTAAGCACAGTCAATTCAGGTTAGCATACAATGGA ATTTTTAATATAAACAAATTTGGAAAAATCTCAAAACTAAGCTGCCCCCC CCAGGTTGCAATAGAAACGTCCTAGGTGGGAAATTGAGGTTGCAATAAGA ATGTCTTGGGTGGAAAATTCTCGAAAAATTAATTAGCAGGGGGGGACGGC TATTAGGTACCCTACAGTACTATGGAATAGTTATACCTGATAATCTTGGA TGCAACCGACCCAGTTACAATCTTTCTGTAGACATTTAATTGGAAGTGAT GTTTGAATCATTCTGTCTGTAGATTTGACGTGATATTTCTGTCAAATATG AATCAATTTAAAAGAAGTTGAAATTCTCTTTTAAAAATGAGAATGACCAA TCGAAGTACTTTAGGTGTACAAACTTTCGCGAACAGAAAATTTCGCGAGG TCGAAAAATCGCGAGGTCGAAAAATCGCGAAATTCACGACATTTACTTTC GAGAATTTGAGGAAAAAATATTTTTCGCGAGCATGAACTTTTGCGAATCA TTGGATAAAAATGAGAATTTTTAAACAAAAATTTTCCTTGAATCTGGTAA ACACGGTTATTTACCTTATCGGCCAAAACTTAGTCGGCCCAAATTTTTAG TCTGGCCCTAATTTTAGTCACCAAGCCAAAATTTAGTCACTTAGGGCCGA CTAAGTTTTGGCCGATAAGGTATTTAAAAAAGCGTTAAAGGCTAGAAATA TGCTGAAAATTTTATATTTATTAAGATTTCAAAGTTTTATAGATTTTCAA TTTTTTAAAGAAAATTTCGCGAGCATAAACATTCGCGAATTAGCCTGTTA AGAATTTTCTAAGACATTAACTTTCGCGAAAAAGGCCAAAATTCGCGAAA ATCACGAAAGTTACTGCTCGCGAACGTTTGTACGCCTAAAGTAATCGAAA AATTGAAAAAAACATTGCATTCAGAACAATTTTCACCGCTTTTTGATTTT ACTGATGGGTGTGGTCAGTACCTTTTATAAGCGCTACGAAAAAGCAAACC AAGGGACAGGGTAAAAGCTTGCTTTTTATTTTATTAGAAATAACGACAAG AGAAAAAAACCACAAAATCTTAACACTTAATAGCCCCATCGCTTGACAGT ATAAGGATAAAATTAATGTTTACCTTATTTGGGTCGTATGCGGTTTGGCA GATGCTGCAGTAAAATAATGCTCTTTCTCCTTCCCTGTCTCTATGGTAAC ATAAAAAATACGATCATGTTTAACTCACCTTTTTAGTAAGATAAACACTA AACTCCAATCCCTTTAAACGTGTACTCCAATCCCTTTTGAACGTGTACTC TTTTTTTCTAGCATGTTTGTTGAGAGTACACATTTTTTTAGAGGGAAACG TAGTGAATTTATATACACTGAAGAAAATACAAACTAGCGACTAACCATGA CAATCTGTAACAAAAGCCCAATATACATATTGGAAGAAAAAATGAAAAAA TAAAAAACAAGGAATGCACAAGACACAAAAAGGAAGTACATGTTTTTTTT ATAAGCATACAAAAATCCGAAAACAGGCTCAGAGATGCTTAGGTGGAAAG CTTAATAAGGCTGAAAAATGCTTGAGGGGAGGCTTAAATCCAAAGCATAA ATTCAGAGAAATACTGAAAATCCGTAAAATTCCAGCCAAAAAAAGCCAAA ATCAGGCAGGGGGGGGGCACGCAGTTACTACAAGACAGTATGACACTTAC TACCGTGGTGGTACTGTATTCAGAAGTTATGAAAACAGTTACTACACAGT GTAGTAACTGCTGTTTGGGGGTGGTGCCGAACACTAAAACTAGCACTTTT GGTGTAGTAAGTGCTTATATTTTAATTATTTTTAAAAAAGTTTCAAAATT TTTCACAAAAAATGATTTTTTTTGTGAAAAAATTCTTTGTTAAAAAAAAT ATTTTTGTTATAAATGGACGAAAAAAAAATTGAAATTTTTCTCAGACCCA ACTTTGAAATTATGCTTTCCCTAATTATCATTAAAATGTTCTCAACAGCT GTTAACCAAGTAAATTAAAAGAAAATCTAGCACAAAAATGGCTTTAGGTT GAAAAATAATCACAATTTAGGGTAATTTCGAGCATTTTTTTGATGATATC ACTCAAAAACAGGGGTGGTACATGGAAATCTTTTCTGAAAACAGTTACTA CCAAGGTGTAGTGACTGCAAAGGGTGGTGGTCCTGAAAAAAAGTGTTGAA AAAGCACTTACTACACATCATGTCTTGTAGTAACTGCGTGCCCCCCCCCC CTGAATCAGGAAAAAAACATTTTTCGTAGGCCCAAGTAATGCTTGCCATA TGCTTAAATTTTCCCCATATCTGAGCCTAGATATGCTTATAAGTGCAATG CTTATAAAAAAACACATGTAATAAGCTGAAGACAGAAGCATATCACCAGG CTTTAAACTAAAAACACTGAAGCTTTGCCTAACCATATGCGAAACCTCAG TTTATAAATCTAAATGGATGTCGTACCTTTTAGCTTTTTCTTTTTGTCCC TCTTCATAATGAAACAGACAATCATGGCACATTAAGTGTTCACAAGGTAG TTCTGTTGCCTTCCTCATAATACATAAACATATCGGGCATTCGAACATTT TACGATCAGGGCCATCGACTTCAAATTGAAAACCTGTTGGTGACAATTTC ATCTTTTCAAGACACGTCTGACATTTATTGTTTTCGTCTGTGACAGGTGT CATACAAATTGTACATTTTGGACAGTCTACTACGCATGCTCCCAAAATTT GCTGCTCTTCAGATGCAAATCGTACTTCTTTGCTTGATGCCATTTTAAAA ATCTGCTAAAAGAAACAATGTTACACGTTTTTTTTTTTATAAGGAACCTT AACTTTGCTCTGAGCCTGGAGTTCCTTATTTTTACAGAGAACATCAGCCT CAAAGTTCCTTATCGAGTTCCTTATTTACAAAGCTGCTAAGTTTGGATTC GCAAAATATTTAACTTCTTTATAAGTATAACTTCTTCTCAGCCTGAGCAG TTCCTTAACTATTCCTTATTTTTTGGACCATTTTCAGCCTCGAGTTCTAT ATAAACGTGTTCCTTCTATAAAATAAACGTGTAGCAATAATACACTCCTT TTTATATAAACCATTTTTATAAGAGAAATGAGGCTTCAAGCTTCAGATTT TCAAAAAATAAAAACAGTTTAAGAACAACGTTGAGCTTTGAATGGCTGAA TTAAGGGTTAAAATAGGATATTAAACCTGAAAAACTTAGGTTTTTAAAAT TAGAAAAATTTTAAGCTGAAAGTGCCAAAAATATAAATTTTTTATAAAAT GAGTCCAAAAACCGGTAAATTATTCAAATAATATAACATTTCAAAAGAGT AATGCTAATGCTGTATCAAAACTTTAAACCCTAAAAAATAAATCTATCAT AATAAAACATTTTTGCTTACATCTCCGTAAGTATTAAAAAAACCTCACAT GATGCTGAAACTCTCGTCGCACTCTCCTATAAACTCAATAAACAATATTG ACTTATGATTGCAAAATTATGTGTCTTTGAATCCACTTGATCGATTATTT ATTCAATTCTGAGAATGACAGTTTTATTCATTTTATAAGATTATGAATCC ACGTCCTCAGTATTGTAGCTCTTTTCAACTTTGCAGCAACCCTTTGATTT CATATTTGTTAAATTTAAATCATATCAGATCATATCAGTATCGTAGCTCT TTTCAACTTTGCAGCAACACTTTGATTTCATATTTGTTAAATCCTATGAG TTGAAATTAATTTCAATTTTCCGGAAACACTAAATTTTTTTATTTTCGCC TTATATTATGATTTTTTCCTGACACCTGTGTATTTTTGTCTTGTTGAAGC GACCTATCAGAATTCCAAGATACCATTTATGAACTAGGCAAAACAAAGCT TCAGGATAGACTTACTTATATAATTTGCTCCTTTGTTTAATTCCTGCTAG TTCTGAATTAGTCGTCTAGACTACGCTAGCAATATAAAACAAATCTTTCA ATTAGGCTATTCCATTTAATATCCATACAGGGGGTGAACGAACATTTCCA GCAGGTTATACGACTATTTCCTAGAAGAATTTCTAGTGGGTCCAAGGAAA GTACACGCTTTTTGAAAATTATGAAAATGGCCAAAAAACTAAGAATATGC TAAGAATATCACCATGGAATTTTGCTACTCAAGCTAAGAATGCCATTTTA AGAGCATTTCCAATTATAAATTATCAATTATCCCCAAGTTAGGCCCAAGT TAGACTCACTGCTTTTACAAAAGTGCCATTTTATGCTTGAGACGTATGTA CTAAATGTTAAATCTATTATGAATTAGGATCCTAACCTAAGAATGAGCTG TAAGAATATTTTAGGATGATTTTCCCAAAAACGTTAAGAATATCCATGAT GAAATGGATTTACACCATTCTTATAAAAAAGCGTGTATTTTAAATTGTTC TAAGGGGTAAAATACTGGTTTTAGTTCGTCCACCCTCACTTTAAAGGTAT GACGAAGAATCTATTTGTTATTTTGCTACTTTAGAGAGGTGAACATTTTC ATGAGTTATTTTTGGTTTGAGAAGGCTCGTCCACCCCCTGCTGCCCTCTG TATTGATATTGAATGTAACAGTCTACTTATTAGCAGGAGATATCCTAAAA ACAACCTCTCTTTTTGGTAGGTATGATAATAATCAAGTTTGTAAAGCTCT TTTTTATTTTTTCAGGCAATTGTTCGAATATGAATAGTGATAGCGACGAC GATGATGATAAACTACCCACACCAGCTAAACCATCATTGAAAATGAGATT GTTTTGTGACGAGAACAAACGAGAACTATTACGATCAGTTTTCGAAAAGA ATTCACCGAAAGACTCCACTTCTGCGTCATCTTTTTCTTCCAATCGAAAT CAATGGTTAGGGAAAAAGCCCAAGGGCAGTAAAGAAAATAAACGACCAAG AGTGATTACTATAGATGATTCATTCTGATTGGTGATTCATTCTGATTATT GATTTTTCGTGGTGAAGTCCTCTTCATGCATCAGGCTCTCAACAACATTT GCTACTCTCTGGCCTCTATTGGCGGTGGAAATGTGAAGATCGAACATTGA AAGAGAATGAACCACCCTGGGTGACCACTATAGATGATTCATTCTGATTG ATGATTTTTCGTGGTGAAATCCTCTTCATGCATCAGGCTCTCAACAACCT TCTTCCTCCATTAGCTTTGGAAAAATAGAAAATCAGAAAGTAAAAAGAAA ATAAACGACCTAGAGTGACCACTATAGATGATTCGTTCTGATTGGTGATT CATTCTGATTATTGATTTTTCGTGGTGAAGTCCTCTTCATGCATCAGGCT CTCAACAACATTTGCTACTCTCTGGCCTCTATTGGCGGTGGAAATGTGAA GATCGAACATTGAAAGAGAATGAACCACCCTGGGTGACCACTATAGATGA TTCATTCTGATTGATGATTTTTCGTGGTGAAATCCTCTTCATGCATCAGG CTCTCAACAACCTTCTTCCTCCATTAGCTTTGGAAAAATAGAAAATCAGA AAGTAAAAAGAAAATAAACGACCTAGAGTGACCACTATAGATGATTCGTT CTGATTGGTGATTCATTCTGATTATTGATTTTTCGTGGTGAAGTCCTCTT CATGCATCAGGCTCTCAACAACATTTGCTACTCTCTGGCCTCTATTGGCG GTGGAAATGTGAAGATCGAACATTGAAAGAGAATGAACCACCCTGGGTGA CCACTATAGATGATTCATTCTGATTGATGATTTTTCGTGGTGAAATCCTC TTCATGCATCAGGCTCTCAATTTGCTACTTTCTGGCCTCCATTGCCTGTG GAAAGAGAAAACCCGTAAGGTAGTAAAGTAAAGGAAACGAATGATCAAGA GTGGTCGTTATAAAACCACCTTTGGCCCTGAGGCAATGAATGACCCAGAA TGATCCTTATAAAACCACCATTGGCCATGGGGCAATCAAAGAAAGATTAT CACTATCTTAACTTATTCTTCGAATCAAAATCAGTTATTGGGGGAAAGTG GATTAATACAATGAGTAGAAAATAAAATAATGATAAACACAGAACATAGA CCTGGAAATGAGAACTTAACAACCTGACCGTGATTGGTGATTTATTTTGC ATTCCTCTGAATGTATTCGGTTATCTTTTGGATTGAGTTGTACACTCCCT TCTCACAGACTCGGTAGGATTCTTTTAGCCAGTGGGGATAAAAATAACGG ACTGAAACTCGATGGAGATTAATATTCTCATATGTTTTATGACCGGGGAT TTAAATTCTTTTGTTTTCAAGTCAGAAAGTTCAGTAGGGATAGGAAAAAT AGTAAATATTCTGCAGCGAGGATTGGTTTATTTGATTATTTTCAGTGGGG ACAAAAATTGGAGGATAATTTTTCACCGGAGACGATATTTTGGCCAATTT TTCCACTGGGAAGGGCTCCTAGTGGGTCTGTGAGAAGGGGGTTTAGTTTT GATGGGAAAAAAGATTTAACATTGTTGGTATTAGTAAATAATTGGTATTT AAACTTTTTAAATGATTGAACGAAATGATATCACTAACCTTGAAAGAATA TGGACGCCTGTTCGCCTTTATCCTCGTCTTTTTCAAATTGATTAACAAAA GTTCGGCTTGATTCTGGTTCATCAGCAATGATTGATATTATACTCCAATG GTTTTCTAAAATAAACTTGTTTTGTCATGGTTTTTTGACATTCATATTTT TGGTATTCTACGTGAGCAAAGTTTTAAATCGTTGTAT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_002209XLOC_002209Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00003953-exon-sc0000038-1575043694:693418..694240TCONS_00003953-exon-sc0000038-1575043694:693418..694240Clytia hemisphaericaexon
TCONS_00003953-exon-sc0000038-1575043694:692324..692432TCONS_00003953-exon-sc0000038-1575043694:692324..692432Clytia hemisphaericaexon
TCONS_00003953-exon-sc0000038-1575043694:690587..690633TCONS_00003953-exon-sc0000038-1575043694:690587..690633Clytia hemisphaericaexon
TCONS_00003953-exon-sc0000038-1575043694:690094..690160TCONS_00003953-exon-sc0000038-1575043694:690094..690160Clytia hemisphaericaexon
TCONS_00003953-exon-sc0000038-1575043694:686759..686906TCONS_00003953-exon-sc0000038-1575043694:686759..686906Clytia hemisphaericaexon
TCONS_00003953-exon-sc0000038-1575043694:678805..679275TCONS_00003953-exon-sc0000038-1575043694:678805..679275Clytia hemisphaericaexon
TCONS_00003953-exon-sc0000038-1575043694:677204..678330TCONS_00003953-exon-sc0000038-1575043694:677204..678330Clytia hemisphaericaexon
TCONS_00003953-exon-sc0000038-1510915933:693418..694240TCONS_00003953-exon-sc0000038-1510915933:693418..694240Clytia hemisphaericaexon
TCONS_00003953-exon-sc0000038-1510915933:692324..692432TCONS_00003953-exon-sc0000038-1510915933:692324..692432Clytia hemisphaericaexon
TCONS_00003953-exon-sc0000038-1510915933:690587..690633TCONS_00003953-exon-sc0000038-1510915933:690587..690633Clytia hemisphaericaexon
TCONS_00003953-exon-sc0000038-1510915933:690094..690160TCONS_00003953-exon-sc0000038-1510915933:690094..690160Clytia hemisphaericaexon
TCONS_00003953-exon-sc0000038-1510915933:686759..686906TCONS_00003953-exon-sc0000038-1510915933:686759..686906Clytia hemisphaericaexon
TCONS_00003953-exon-sc0000038-1510915933:678805..679275TCONS_00003953-exon-sc0000038-1510915933:678805..679275Clytia hemisphaericaexon
TCONS_00003953-exon-sc0000038-1510915933:677204..678330TCONS_00003953-exon-sc0000038-1510915933:677204..678330Clytia hemisphaericaexon
TCONS_00003953-exon-sc0000038-1491911889:693418..694240TCONS_00003953-exon-sc0000038-1491911889:693418..694240Clytia hemisphaericaexon
TCONS_00003953-exon-sc0000038-1491911889:692324..692432TCONS_00003953-exon-sc0000038-1491911889:692324..692432Clytia hemisphaericaexon
TCONS_00003953-exon-sc0000038-1491911889:690587..690633TCONS_00003953-exon-sc0000038-1491911889:690587..690633Clytia hemisphaericaexon
TCONS_00003953-exon-sc0000038-1491911889:690094..690160TCONS_00003953-exon-sc0000038-1491911889:690094..690160Clytia hemisphaericaexon
TCONS_00003953-exon-sc0000038-1491911889:686759..686906TCONS_00003953-exon-sc0000038-1491911889:686759..686906Clytia hemisphaericaexon
TCONS_00003953-exon-sc0000038-1491911889:678805..679275TCONS_00003953-exon-sc0000038-1491911889:678805..679275Clytia hemisphaericaexon
TCONS_00003953-exon-sc0000038-1491911889:677204..678330TCONS_00003953-exon-sc0000038-1491911889:677204..678330Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000038supercontigsc0000038:677204..694240 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
1.49596 1.99034 1.14293 1.56398 0.000177114 5.49691e-10 0 0 0 0 0.911813 0 0 0 0 0.0967736 0 0.639492 0 0.691978 1.71083 2.73919 1.27686 1.94454 0 0 2.5043 2.3894 3.03235 3.48763
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00003953 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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