TCONS_00003935 (transcript) - C. hemisphaerica

Overview
NameTCONS_00003935
Unique NameTCONS_00003935
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length3608

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00003935 ID=TCONS_00003935|Name=TCONS_00003935|organism=Clytia hemisphaerica|type=transcript|length=3608bp
CAAAAAGTCCAAAGAGATCACACTGAAAATATCGATCGTCTACAAATTAA
ACTAGAAGAAGCAGAAGGGCacatagaaaatttgaaaagtgtGGAACCGA
TGTtgagaaaagaaattgaaaattctctAGAGGAGCGTCGATTAGCACaa
caaaaaatcgaaaaccTTCAAGCAGAGCTCattgaaaaagagaaagaaat
cgAACACTACAAGTACAAATTGAAAGTCAAGACGGATGATCTTGAACGCG
AACAACATGAGCGGGTGGAAGAGGTCATGATTTTGACGCACGAAATTGAG
AATTTGAAATATATGAAAAATGCTGCTATCTCACAATATGACGAACATGA
AGATTTACTCAAGCAAATGGAAATCATCAAAAAGgaGAACAACAATCTGA
GAACAGCACAAGACGATTTACGTAATCAGATGTTTGAACAGAATACTAAA
ATCGAAATGGAGGTACAAAAATAATATGGTTTTTATTCAGGATACGCACC
CCTGGCAGtgtcttctaacattacgtcacttttaTAACAGCAGCTGATAC
tttaaggtcccgaatagtagggggTCCCTCCCGAATAAAAGGGGGGAccg
aatttttttaaaacctaATAAACGGGCCGAAATCATACTCCaaaaaaacc
ccaaaataaggcAATGATAAGCTGAGaacaggctatttagagcaattcag
cttgtgataactgaaaatattttcaaaaataaataaatgagggGATCCTA
TTAAGAGCGAGAGGGGGGTCCGAAAATCTTTCAGGTTGGGACGTTTATTC
GGGACCTTTACAACAATCGAGAAGAAGTTTTAAGTCAATAGAGTCTCGAT
AACTCAAACCTCTGCAACAACAACAGACAACAAACCCTTAAAAACAATTC
AGAATTCAGAATTTCCTTTTGCTTCTTTGATTTATAACTGCGCGAATGGA
GACGCCGCTGCATTTGAAGTATATAACCTGACTtttcctttccttttttt
ttaagaaaacgcaTACACTTGCGGACGAACTACAAACAGCAGATAAGACG
GACGTATTGGACGCGTTGCGTGCCGAAGAAAATGAGAATCACCGTTTGAA
ACAATACGTTGATCAACTCCTTATATTAATCATGCAGAGTGACCCTATGC
TGCTCGAGAAATAAAAGCAAGCCTAGTTTCTAGTATATGCCAATTATTCA
AAAGCATAGTGTGATATGATCGGTAGAGTGCATCTACGTTTCATGTTGGT
CATTAGCAGATGTGGCACTTGAGACTCGTCCCGCGACATCAATGGTTAAA
GTAGAACtattacaaaaagtcatcatttGGAATGCCGTTGAAGTGGAAGC
TGGAACATTTGATTTCACAATAATCGATTATCTCAATGTTGATTTAAAGG
TTAGCGGGATTCGACATAATGGTTTTACTGGTCATGTGAGCCAGGTTTTC
GCTTATGACGATTGTATCACAGAATGAGAATTAGGGTTAAACAAAATAAA
TGGAATCATGGAATCACCTGATGCAATGTTATTCGTCTATCTGATGGGGA
AACGTTTGGTGCCGTTTGCGAGGGCAGAAATGCTTTTGGAATTAGGAATT
TTTGGGACTTGATTGTTCAGTCATATCATGCGTACTTAGATACTAATGAT
TTCACAACAATTGTATCAATGAGGTATTTTCAGGGGCAAGTTTACACGAG
TTTTCACCTCGAGTGCACATAAGTTCTAACATAACCTCGAGTGTAGAATT
CGGCAACTCAAGTGCGGCAAATTTAATGTTATTCCATCGAGTTTTTTTCC
TATGATTTAGGCgagtttttgaaatcttgacGTTCCATGTACGTACAAAA
TTCACAAGTGCAGAAATTATGGCTTCCAAATTTTTCCACTGTAAATACCT
TACTCTGGGAACTGGAcatttatttcaaaagtttatgtCTTGATACCAGT
TGATACTTGTCTTTGACGTATTGAAAGGGGgtagataatttttttaaaac
agaGAACAAAATTATGAAGAGAATTTTAATTTATTGATTGATAATCGATA
ATCGATATATTTTTATCGTGTTGTACAGTAATTTTTTCGTTGCTTGTATG
TTTTAATCGTATATAAATAATGCATAAATTTTGCTCAGATCTTTTTTACT
AATTGTTTAAAATCATGTTTTTCATACACTTTTGTaacttattttttgtt
ttattgatttttgtaattttaagtTTGTAAATTTTAGCTTGTTTTTGCtt
tattcaatattttcttaGTGTCTTTTATGCATCTaatgtattttagattt
tagatCTGGAAATCTTTTTGGGCATGATTATAATAAGTTTGTCTTGTTCA
TTTCGCATAAAATTTGATGTTGCAAAAAGATGTTTTCCCAGGGTTTCCTG
GTTTGTTTGCATTTTGTGGGCTTCTGCCTACTGTCCAGAAATTTgaacat
aaataaaaaataacatttgAGTATGAAACCTTacctttttataaacaaaa
caatcCTTATCTTGTGTAATCCTCCTATTATGCAATATTAATTTCTTAAT
GAtcctattttattttattacacCGTTAATTTTCACTGTAAATATTAAAA
ATGATTAATTGttataatttgttttgaaattgtttgTTTTGTGACCAAGa
tttataatttgttttttttccaaagtttcaatatacacgtttttttttaa
taaggaacacgtttataaggaacccgaggctgaaaatggttcaaaaaata
aggaattgttaaggaactgctcaggctgagaataagtggatttgaaaata
atgtaccttattgggactaatttgaccaaattttgatctttcaaggggca
aaaagttcaaaatttcctatgtagtaaggaactcgataaggagctttgag
actgaaattctctgtaaaaataaggaactccaggctcagagcaaagttaa
ggttccttataaaaaaaaaaacgtgtacatggTTTGGTTGGACTGTAATA
TTGAAATATCTTGTTTCACTGGGGTTTTACTTCAAGAGGGGTGGGGTATA
GGGGTAGGGATAATTTAGACAAAAAGGGATACATGGGTATCCCAGTGAGC
AGtcttttttcactttcactCCCAGAGGACCTGGCANGGTATCCCAGTGA
GCagtctttttttcacttttactCCCAGAGGACCTGGCTTTCACTATCTT
TACCGTTATTCCCATGGCGTTCTAGATTTAGAATGGTCGActctaatttt
agtcacctcgttaaaatttagtcactaaggaccgactaagttttggccga
taaggtattcgtGTAATTAAGGTACTCTATAGTATCTGCGgcttacctta
tcggggaaaaatgtCGCAGTTCtatttagtcggggtttttttttcgtcgg
gaaaaattttGTCACCTAGAAGAGAGgctttttcgtcactttccccgacc
aaaatctcaaattcgtcacttttccccgaccaaaattttaaatgttcCTG
ACAAAATATAGAGCTTATAAGAAggaattgttattttttatcaaaccatt
GTAGTTTTAACTTGTAGCTTGTTGTGTTTATTAGGCAAAAGAACTCGTTT
GAAAAGAA
Run BLAST on NCBI

transcript from alignment at sc0000038:3711..15523-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00003935 ID=TCONS_00003935|Name=TCONS_00003935|organism=Clytia hemisphaerica|type=transcript|length=11813bp|location=Sequence derived from alignment at sc0000038:3711..15523- (Clytia hemisphaerica)
CAAAAAGTCCAAAGAGATCACACTGAAAATATCGATCGTCTACAAATTAA
GTAAGTTCATTATGTATTCGGGGATCGCATTATCGTTTTTTGTTATTCGG
GATTTGTTATAAATGTTACTTTGAGACAATCTCATTTAGATCTTTCTTCC
GAGCTGTGCTACCCTAGTTTTAGCTTTGAAAATCATAAAGTTAAGAACAT
CCTCTTCGGGCTTCTAAATTTTTGGATGTTCTTATAAAAAACGTGTATTC
TAAAGATTTTTTGTCCTTTTGAAAAAAACTTTGGTTATTTCTCCAAGAAT
CCGACGATAATACACCTTTTCGACCGTAGCCGCCAATTGCCGCGCGGGCA
TTTTTTTGTCCGCTTTATCCCACTAAAACCGTCCCAGTCCCTTTTTCGCA
CCTATAGACACTAGAAAAATGTGCTAAAAAAAGGATTGGATCGAGTTTAG
TGGTATAATTAAATAGTTAAGTGGCACGCGCCTGACCGCGCGACTACTGT
CGAAAAGGTGTATTGACTCTAGTTGTACAGTTTTCCAAACCGTTGTTATA
GATCGAATTATAGAGACTCGAATTACAGAGAATTCAAGCGTATTGCACGG
AAACTCTAGCCGGTAATTTATATAAGCCGATCAGATTATCTTTAGTATAT
AATTCATTATGAAGAGATTGCAGGAAATACTTTCATTTCTGTTCTGTTAA
GCTAATTAGCTGAAATTCCAACCTTCTCCCAAAAGGGTTGATGTGAGTAA
TAACGAATACTATATTTTTTTAATTAGGTAATTAGTTATGAAATGGAATA
TTACGTCTTTTTTAAGCATGTTGTTATTCTCGTGTTTATGAATGATGTGA
TTGTGTACAACTTTTTGTTTTGGTTTTGTAAATTAGATTTGATATCATCT
TTTTGGAGTTTTTGTTGACCAGCAAGCTGATTTGACTTTTGGATTCGATT
GTTTTTTCATACTTCTAATATTATGTTCAGTTTAGAAATTATTTTTTTGT
GAGATGTATATATTCGTTTTCCAGGACCCCGTAATACTTTTCTATAGACA
GCGAGCATAAACCTCTTCGTTAGTTTGGTTTCTTAGTTGTTCTTGTTTAA
ATCCTTTAAAGCTTTTTCGACTCTTCCCTTTTTTGTATCAAAATAGTTGT
TTTTATTGATCCTCGGTCATGCTCCTACTTGCAGGCTAGAGTTCAAATTT
TCTTTTAAAATCTAAATGTTTGCTTTAAAAATTCAATTCGCTGTTTGCTT
AACGATATATTTTTAAAAATCGACTGTTTATATTTTGAATACGTTATTTT
CTTGATTTTTCTTCCCTGTGAATTTTGGCTTGATAAATAGGAAGGATTTA
TGTGCCACTCACGGGTTTGAATTTTGGTTGGCAACAGTATTCTTCATTTG
GAAGAAAACGTTTTTAAAATGAGTGTACACACAGTGAAAACGTGGCTCAC
ATCAGATTTACTTAATGGTTTCATATACATTGTCTGTCATACACGTTTTT
TAAATAAAAAGATCCAAAGATTTTTGAAACCTTCGGAACTTCTTAACTTT
TCGAGTTTTAAGTCTTTAAAATATTCTTAATGTTCTTATTTTCACCATTC
TGTGAGTATTCCTGTGTGATTTCCTAAATAATGTGACGAAGGGAAGTTAT
GTCTTTTTCCAATTATTATCAGGAAATGTAAAATATAATGACATCAAATA
AATTAGTAACTCTGGCATATAATTAACAATAGTCTCTGTTCAAGTCCTTC
TCCTTCAAGTTCTCCTTTTCAAGTCCTTTTCCTTTGAGCTCTTCTTTCGA
AGTCCTCTTCCTTCGAGCTCTTCCTTCCAAGTCNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNGTCTGGGCTCGAGGGCCTGAGCCCCACTCTATTGATT
TCTATTCATCTTTCAGTTCATTAATATCGTGTTGGCTCAGTCCCAGTCTC
TGCTTGCATTATTCATCGATGATTAGTTTACTAGCTTCACATCTCCGACG
TTCGACAAGTGACGTCCTCGTCACTTCAAAAAAAATTTGGGATCATGGTT
TCGCTTACTTCTTTCTTTCAGGAATCATTAACTTTTTAATGCTTTTGCTT
TCGTGCTGATGTTTTGGTGCAATTAAGTGCTCAATTGTGGTTGTTTACTT
ATCGAGTTTTCATAACCGTTTTAATGGTTTATTCTTCTCTGGATTTTACT
TAGTACACTGATATGACTTACCATCCTCGTTGTTTGACAGTGACGTTCTC
GTCACTAAATTAAAACATTACACAATCGGTGTATTCTGGACTGCATGTCA
AGTTTTCATCTTCGCAGATCTTCAAGTTGTTTTCAACTTTGATGTCGGTC
CTTTATATATCAAATTTTACGTATAATTAACAATTTCTAATGCTGAAATA
TTTTATTTGAAAATAACTAAATTACAAATTATCGTCTGATTCATTAGTAT
TACATAAACTCAATTCATCTCTTAAAAATTTCATAAAATCAATAAAATAT
TTGTTCAATTTCAGTTTCTCTTTTAACAATATTTTAGTCTTTAGTTAATT
GTTAATCTCATTCGGTACGTAAACATATCTGCATTCTATTCGACATCTCG
GAATTTATTCAACAATTTCTCTGCGCTAAATTTTGTCTTGGTTGTAGTCG
GTTAACTGTTCTTCTCANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNTCTTTAAATATTCGTGTTTCATTAAATATCAACTTTATC
AAGCATGGTTAAGTATTGAGTACTCAACACAATGAACGAAGTTTATTTTT
GTTTCTGGGATAAATTTGTTGTTTTTCAAAAATTCTTTTCTTGTACTCGT
AGATCTTTCGGTTGTGCCATTGGTTGTTCTGGTCGTATATTTTATCATCG
TTGAGAATTCTTTCACTGATTTCTGGTTGCTGCTGGCTTTTCACTTGATA
TTGTATTGTAAGATTTATCAACGATATGATATTCATAATCAGGATGTACA
ACGTTGGTAAAATTATTTTCAGTAGCAGACTCAGTTGTATCTTGTTTCTG
TTTCGATTTATCTGGTATTTTCGGCATTTCAGTTGAAACCTCATACATTC
TGTCGACTCTTTTGTGGATATTTGAACACTCTCGTATGATTTCGGAATAT
TCTTCGGGTATTCAATATTCTTGGACGGCTCTTGAACACTACAACATGGA
CTTTTAATACTCTCGGTTGGCTTCTTCATAATATCGGACGGTTTTTCGAT
AATATCGGTCGGTTTTTCAACAACTTCGGACGGGTCTTTGACAATTTCGG
ACGGCTTTTTAACAATCTCGGACGGCTTTTTGACAATCTCGGATGACTTT
TTGACAATCTCGGACGGCTTTTTGACAATCTCGGCTGAATTTTTAACAAT
CTCGGACGGCTTTTTGACAATCTCGGATGACTTTTTGACAATCTCGGACG
GCTTTTTGACAATCTCGGCTGAATTTTTAACAATCTCGGACGGCTTTTTG
ACAATCTCGGATGACTTTTTGACACTCTCGGACGGCTTTTTGACAATCTC
GGCTGAATTTTTAACAATCTCGGACGGCTTCTTGACAATCTCGGATGACT
TTTTGACAATCTCGGATGACTTTTTGACACTCTCGGACGGCTTTTTGACA
ATTTCGGATGACTTTTTAACAATCTCGGACGGCTTTTTGACAATCTCGGT
TGAATTTTTAACAATCTCGGATGACTTTTTGACACTCTCGGACGGCTTTA
CAATATTCTCGCACTGGTTTATTCTGGAAGACTTTTCAATATTCTTTGAC
AGTGTTTTCTTAATTTCTGACAAATGCTGTGAATTATTTGGTGACTGATG
GATAACCTTGGAGGGATTTTGAATAATTCTAGATGAATGTTGAATCATTT
CTTGCGATTTCTTTAGCGGAAGATGGTATATCTTTGGAGACAGGTTTGTA
ATCTTTGACAACGAGTGAAGTTTTGACGGTTCATAAACAATTTCGCTCGG
TGAGTGAAATTTCGGCGGTTGTTGACATGTTATACGTGGTCGGCGAATAA
TCTTTGGTGGTCGGTAATGAACCTTCGGTGGTGAGTGAACTTCGATAATG
ATAGGTGGTGGATGAATCTTTGGTGGTTGTATAAATGACTTGCGTGGTTG
GCGAATAATTTCCGGTGGTCGGTAGATAATATTCGGTGGTGGGTAAATTT
TTGAGCATTTTCGAGGTTTCTGGTCTCTTACCGGCGTTCGCGTTGAAGTG
TAGCGGCGTCCATTTAAGGAGATTCCTCTATTTTGTTGAGGAGGTCTGTT
CCGTTGTCGCTTGAGATTCTTGATTTTGGCTTGCATTCTTTCGATCGCTC
TCATTCCGTCTGTTGTTGATGCAATCTTTGGTTGGTCAAGCGTATTGATT
GTTTGAGGCGTTATCATTCGTAACTTTTGTTTGATCACCTCGGATACTTC
TTCATCGAGATCTCTTTCACCGGCGTACTCATTTAATGACAGTCGTCTTG
GTGTTGCACCGGAAGATTGGACAGTACACGCGCCAGCTGCTAATTTGTCA
ATCTTTTCGTTCAGCTCTTTGAGCAGTTTGGTGGAGTTCACATTGTAATT
CGGCTTGATCGCGTTTTCTAATCTGATGTAAGCCACTGCTTCATTGAAGG
TTTTGAATCTCTTTAAAATGATTGATATTCGTAAATCCTCATTCAGTCCG
GCGATGAGTGAGTCCAATTTCTGCTCATTGCTGTAATTTAATTGATACAC
TAGCTCTTGGAGTTTTTCAAGGTAGACATCTAGTGATGAACATTCCTCTT
GTTTGAGGTTGACTAATTCAGCTTTCTTTAACATTCTGATATCGGACGAC
CAGAAGTAGTTCAGCAACATCTCTTTTATCAGTTTGTATGAAGGCTTCAC
GTCTGCTGGTAGCGCTCTGTAATAGTGCATCGCGTGACCTTGTAAGCCAT
ATGCTGTTAGAACGTTCAAACGTTCTTTGGAGCTCCACTTGCCAATGGTT
GCTATGCTCTCGAAACGTTCGAAATAGCTTTTGATATTTTCATTACTGGT
TCCATTGAATTGTGGTATATCGTCCAAAGTCATTTGGATTACGTTCATCT
TGAAGATGCTCGTCATTGCTTGCTTGTTTTCGCTTTCATCGACACTGTCG
TTTTAGCGAGTTGCATGTTGAATGATTTATAAGTTGTCCAAATGTGTTAC
CTCTAGATGCTGTATTCCTCTTCCTTTACTTATTTATCTTTCGATTCAAA
ACACAAAATTGAAATCAAAATTTACTGCACAATGTTAGGTATTATTTTAC
TTGAATCAATTGTAACCAATGCTTGGATCAATTGTAACCAATGCTTGGTT
ACGGCAAAGGTTCACTGCGTTCAAGTTTGTTGAATAATTGATACCGAGAG
TTTGACGTTAAACTTCTCTTCTCGTTGAACTTTAAATAATTGATTTTGTG
TAAAACTCTCGTTTTGATAGTTTTTAATACTTTCTGATGTAAAATCACTT
TTGTCCTTTTCAAAATAACGTGTCCTTATNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNTTACTGTTCTCGTTCTTTGGTGTAATGTA
GCTTCCTCCTTTTGGATCTTTGATTCTTGCGAAGCGAGTTCTTCTGGTTC
ACCTTCAGTGTGACGAAGGGAATTTAGGTCTTTTTCCAATTAAGTAATAT
TTATCAAATAATGTACGATATAATGACATCAATTAAATTAATAACTCTGG
CATATAATTAACAATAGTCTCTGTTCAAGTCCTTCTCCTTCAAGTTCTCC
TTTTCAAGTCCTTTTCCTTTGAGCTCTTCTTTCGAAGTCCTCTTCCTTCG
AGCTCTTCCTTCCAAGTCCTTGATTCCTTTCCTTTTCTCGCTCATGTTTG
CTCGCCCTATTCAGGGGTCTGGGCTCGAGGGCGAGGGCCTGAGCCCCACT
CTATTGATTTCTATTCATCTTTCAGTTCATTAATATCGTGTTGGCTCAGT
CCCAGTCTCTGCTTGCATTATTCATCGATGATTAGTTTACTAGCTTCACA
ATAATTAGCGCAAATCCTTAAAATACCTTATCGGGGAAAAAATGAGGGGG
TGACGAAATTTTCCCCCGACGAATTTTTTCTCCGATATTTTATTACTCGA
TCGAAACTTTTACCCGATTTTTTTTAAACCCGACCAAAACTTTTGCCCGA
TTTTTTAAACCTCAACCAAAATTAAAATCTACATTTTTTACACCTTAATT
AACCGAAATTAGTGCTTTAAATGTCGAATTACTTTTTTCGAGCTAGTGAA
GGAAACCATTTCATTTGGACTATTTAGTTGGGTGAAAGTGACTAAATTGT
AAATTTCGTCGGGGAAAAGTGACGAATTTGAAATTCCGGTCGGGGGAAAG
TGACGAAAATGCCTCTAGGTGACGAAATTTTTCCCTGACGAAAAAAAACC
CCGACTAAATAAAACTCTGACATTTTTTTCCCCGATAAGGTATTCTTAAC
TCTTTGGTCATCGAAAGCCTCGTGCTTTTATAAAAAACCGTCTAGTGAGT
TCATTGACTTGGCTCTAGTGTGAACTTATTATGAAGCGCCCGTAGCATAA
AGGTTCGACCCCCCTGCCAGGTTATACCAAAGATTCCCAAAATGGTACTT
GATGCCTCTCTGCTTGATGCTCCGCAACTAAAGAGATAGATCAAGAGGAA
GTCCATCTAGTGAAAGGACTGGCGCCCTTCCCTTCCTTCGGGTATATAGC
TAGAGAAATGGGAGCCTACGGGTCGCCCTCATCAAGTAACTGATCAAACA
TGTGTTCATCTTTTAGACTAGAAGAAGCAGAAGGGCACATAGAAAATTTG
AAAAGTGTGGAACCGATGTTGAGAAAAGAAATTGAAAATTCTCTAGAGGT
AGGCTATATTCTTAATGTTCAAGGCATGAAAAACACGCAAACACCCGAGA
AAGCCCAGAATACACCCCTCTCGAGATGTATCAATATACCAAGTTTATGC
ATGTGTGTTTTTTCTGCGAGACGGTAAGGTTCTAATATGGCTAGATCCTG
ACCAGCTGAGGGCGATGGTAATTAGCACTTTTATCGTCCTCGATTTTGCG
GGTCAGAACTACGGGTTATCGCTTCAGTCACTCTACCGTCCTCAAAAGTG
GAAAAACATAAACTTGCTAATATTAGTACCGCGACCGATGCCACCCTGTT
TCCATTCGAATATACAAGGTTCTTTGGTTTCTTAGTATAGGTGTGTCCAC
CCATTTGAAATGTTATGCAGTTTTGCCACATAATGAGTTCAGTCTAAAAA
ATTTGTGTTTTTTTTTTCCACAGGAGCGTCGATTAGCACAACAAAAAATC
GAAAACCTTCAAGCAGAGCTCATTGAAAAAGAGAAAGAAATCGAACACTA
CAAGTACAAATTGAAAGTCAAGACGGATGATCTTGAACGCGAACAACATG
AGCGGGTGGAAGAGGTCATGATTTTGACGCACGAAATTGAGAATTTGAAA
TATATGAAAAATGCTGCTATCTCACAATATGACGAACATGAAGATTTACT
CAAGCAAATGGAAATCATCAAAAAGGTGTGTATACTCACTGTATACTCCC
TGTATACTCACCCCTATGGTTGCTTTTTTCTTAGTCCGAAGGCCACTTAG
TCTCAGGTGCCTAAAAACGGGGTGGTTGGAAAAATCTTCAAATTTTAATA
AATGGGGGGGGGCTATTTACCAGGGGGTGGAAATTGTACTTCTAGAATAA
TATGATTATAGGCTAAAGCCTGGTTATTTAGACCAAGATAGGGACTCTTT
TTATTGAAAGTCGAAAATGTTTTCAAAAATTAATAAACGGGGGTCCTAAT
AAGTTGGAAGGGGGGGGGGGGGGGGAAAAATAAAAAAAAAAAAAATTTTA
ATAAAATTATAGAAGGGGTTCCTAAAAAGTGGGGGGGGGGGGGAGGTGGA
ATAATAAAAAATAACAAGATATTTAAAGTTTATAAATGTATGATGAATTG
AAATGTTGGAAAAATTGATTTTCTTCTTTTCTTCTTCAGGAGAACAACAA
TCTGAGAACAGCACAAGACGATTTACGTAATCAGATGTTTGAACAGAATA
CTAAAATCGAAATGGAGGTACAAAAATAATATGGTTTTTATTCAGGATAC
GCACCCCTGGCAGTGTCTTCTAACATTACGTCACTTTTATAACAGCAGCT
GATACTTTAAGGTCCCGAATAGTAGGGGGTCCCTCCCGAATAAAAGGGGG
GACCGAATTTTTTTAAAACCTAATAAACGGGCCGAAATCATACTCCAAAA
AAACCCCAAAATAAGGCAATGATAAGCTGAGAACAGGCTATTTAGAGCAA
TTCAGCTTGTGATAACTGAAAATATTTTCAAAAATAAATAAATGAGGGGA
TCCTATTAAGAGCGAGAGGGGGGTCCGAAAATCTTTCAGGTTGGGACGTT
TATTCGGGACCTTTACAACAATCGAGAAGAAGTTTTAAGTCAATAGAGTC
TCGATAACTCAAACCTCTGCAACAACAACAGACAACAAACCCTTAAAAAC
AATTCAGAATTCAGAATTTCCTTTTGCTTCTTTGATTTATAACTGCGCGA
ATGGAGACGCCGCTGCATTTGAAGTATATAACCTGACTTTTCCTTTCCTT
TTTTTTTAAGAAAACGCATACACTTGCGGACGAACTACAAACAGCAGATA
AGACGGACGTATTGGACGCGTTGCGTGCCGAAGAAAATGAGAATCACCGT
TTGAAACAATACGTTGATCAACTCCTTATATTAATCATGCAGAGTGACCC
TATGCTGCTCGAGAAATAAAAGCAAGCCTAGTTTCTAGTATATGCCAATT
ATTCAAAAGCATAGTGTGATATGATCGGTAGAGTGCATCTACGTTTCATG
TTGGTCATTAGCAGATGTGGCACTTGAGACTCGTCCCGCGACATCAATGG
TTAAAGTAGAACTATTACAAAAAGTCATCATTTGGAATGCCGTTGAAGTG
GAAGCTGGAACATTTGATTTCACAATAATCGATTATCTCAATGTTGATTT
AAAGGTTAGCGGGATTCGACATAATGGTTTTACTGGTCATGTGAGCCAGG
TTTTCGCTTATGACGATTGTATCACAGAATGAGAATTAGGGTTAAACAAA
ATAAATGGAATCATGGAATCACCTGATGCAATGTTATTCGTCTATCTGAT
GGGGAAACGTTTGGTGCCGTTTGCGAGGGCAGAAATGCTTTTGGAATTAG
GAATTTTTGGGACTTGATTGTTCAGTCATATCATGCGTACTTAGATACTA
ATGATTTCACAACAATTGTATCAATGAGGTATTTTCAGGGGCAAGTTTAC
ACGAGTTTTCACCTCGAGTGCACATAAGTTCTAACATAACCTCGAGTGTA
GAATTCGGCAACTCAAGTGCGGCAAATTTAATGTTATTCCATCGAGTTTT
TTTCCTATGATTTAGGCGAGTTTTTGAAATCTTGACGTTCCATGTACGTA
CAAAATTCACAAGTGCAGAAATTATGGCTTCCAAATTTTTCCACTGTAAA
TACCTTACTCTGGGAACTGGACATTTATTTCAAAAGTTTATGTCTTGATA
CCAGTTGATACTTGTCTTTGACGTATTGAAAGGGGGTAGATAATTTTTTT
AAAACAGAGAACAAAATTATGAAGAGAATTTTAATTTATTGATTGATAAT
CGATAATCGATATATTTTTATCGTGTTGTACAGTAATTTTTTCGTTGCTT
GTATGTTTTAATCGTATATAAATAATGCATAAATTTTGCTCAGATCTTTT
TTACTAATTGTTTAAAATCATGTTTTTCATACACTTTTGTAACTTATTTT
TTGTTTTATTGATTTTTGTAATTTTAAGTTTGTAAATTTTAGCTTGTTTT
TGCTTTATTCAATATTTTCTTAGTGTCTTTTATGCATCTAATGTATTTTA
GATTTTAGATCTGGAAATCTTTTTGGGCATGATTATAATAAGTTTGTCTT
GTTCATTTCGCATAAAATTTGATGTTGCAAAAAGATGTTTTCCCAGGGTT
TCCTGGTTTGTTTGCATTTTGTGGGCTTCTGCCTACTGTCCAGAAATTTG
AACATAAATAAAAAATAACATTTGAGTATGAAACCTTACCTTTTTATAAA
CAAAACAATCCTTATCTTGTGTAATCCTCCTATTATGCAATATTAATTTC
TTAATGATCCTATTTTATTTTATTACACCGTTAATTTTCACTGTAAATAT
TAAAAATGATTAATTGTTATAATTTGTTTTGAAATTGTTTGTTTTGTGAC
CAAGATTTATAATTTGTTTTTTTTCCAAAGTTTCAATATACACGTTTTTT
TTTAATAAGGAACACGTTTATAAGGAACCCGAGGCTGAAAATGGTTCAAA
AAATAAGGAATTGTTAAGGAACTGCTCAGGCTGAGAATAAGTGGATTTGA
AAATAATGTACCTTATTGGGACTAATTTGACCAAATTTTGATCTTTCAAG
GGGCAAAAAGTTCAAAATTTCCTATGTAGTAAGGAACTCGATAAGGAGCT
TTGAGACTGAAATTCTCTGTAAAAATAAGGAACTCCAGGCTCAGAGCAAA
GTTAAGGTTCCTTATAAAAAAAAAAACGTGTACATGGTTTGGTTGGACTG
TAATATTGAAATATCTTGTTTCACTGGGGTTTTACTTCAAGAGGGGTGGG
GTATAGGGGTAGGGATAATTTAGACAAAAAGGGATACATGGGTATCCCAG
TGAGCAGTCTTTTTTCACTTTCACTCCCAGAGGACCTGGCANGGTATCCC
AGTGAGCAGTCTTTTTTTCACTTTTACTCCCAGAGGACCTGGCTTTCACT
ATCTTTACCGTTATTCCCATGGCGTTCTAGATTTAGAATGGTCGACTCTA
ATTTTAGTCACCTCGTTAAAATTTAGTCACTAAGGACCGACTAAGTTTTG
GCCGATAAGGTATTCGTGTAATTAAGGTACTCTATAGTATCTGCGGCTTA
CCTTATCGGGGAAAAATGTCGCAGTTCTATTTAGTCGGGGTTTTTTTTTC
GTCGGGAAAAATTTTGTCACCTAGAAGAGAGGCTTTTTCGTCACTTTCCC
CGACCAAAATCTCAAATTCGTCACTTTTCCCCGACCAAAATTTTAAATGT
TCCTGACAAAATATAGAGCTTATAAGAAGGAATTGTTATTTTTTATCAAA
CCATTGTAGTTTTAACTTGTAGCTTGTTGTGTTTATTAGGCAAAAGAACT
CGTTTGAAAAGAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_002200XLOC_002200Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00003935-exon-sc0000038-1575043694:15474..15523TCONS_00003935-exon-sc0000038-1575043694:15474..15523Clytia hemisphaericaexon
TCONS_00003935-exon-sc0000038-1575043694:8076..8157TCONS_00003935-exon-sc0000038-1575043694:8076..8157Clytia hemisphaericaexon
TCONS_00003935-exon-sc0000038-1575043694:7399..7650TCONS_00003935-exon-sc0000038-1575043694:7399..7650Clytia hemisphaericaexon
TCONS_00003935-exon-sc0000038-1575043694:3711..6934TCONS_00003935-exon-sc0000038-1575043694:3711..6934Clytia hemisphaericaexon
TCONS_00003935-exon-sc0000038-1510915933:15474..15523TCONS_00003935-exon-sc0000038-1510915933:15474..15523Clytia hemisphaericaexon
TCONS_00003935-exon-sc0000038-1510915933:8076..8157TCONS_00003935-exon-sc0000038-1510915933:8076..8157Clytia hemisphaericaexon
TCONS_00003935-exon-sc0000038-1510915933:7399..7650TCONS_00003935-exon-sc0000038-1510915933:7399..7650Clytia hemisphaericaexon
TCONS_00003935-exon-sc0000038-1510915933:3711..6934TCONS_00003935-exon-sc0000038-1510915933:3711..6934Clytia hemisphaericaexon
TCONS_00003935-exon-sc0000038-1491911889:15474..15523TCONS_00003935-exon-sc0000038-1491911889:15474..15523Clytia hemisphaericaexon
TCONS_00003935-exon-sc0000038-1491911889:8076..8157TCONS_00003935-exon-sc0000038-1491911889:8076..8157Clytia hemisphaericaexon
TCONS_00003935-exon-sc0000038-1491911889:7399..7650TCONS_00003935-exon-sc0000038-1491911889:7399..7650Clytia hemisphaericaexon
TCONS_00003935-exon-sc0000038-1491911889:3711..6934TCONS_00003935-exon-sc0000038-1491911889:3711..6934Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000038supercontigsc0000038:3711..15523 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0.0483672	0.172665	0.3289	0.196644	0.119818	0.0755887	0.0672102	0.02402	0.0311459	0.0286029	0	0.0381637	0.106834	0.161987	0.0163942	0	0.0223136	0	0	0.0439438	0.0566724	0	0	0	0.045283	0.22747	0.0955692	0.099512	0.162297
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00003935 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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