TCONS_00003911 (transcript) - C. hemisphaerica

Overview
NameTCONS_00003911
Unique NameTCONS_00003911
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1912

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00003911 ID=TCONS_00003911|Name=TCONS_00003911|organism=Clytia hemisphaerica|type=transcript|length=1912bp
GCTGGTCAATTGCATTTTTGAATCTTGGATGCAGCAAGAAGTAAAAGgaa
taaacaaaaaaaaacgaaaatgatcAACTCCGAGATGATCAGAATGCTTT
ATAAATACATGGTCATACTCAGTACACTAATACTATACACACAAGCACAG
ACACAGCCTCGTTCCCAGCCAGAATACCACAGCGCATGCGCACCAGTTCT
CTCATACGTTGAGACCAATCCAGATCACAAATTCGAACCGTTGGTCGTCA
AACTTCATAGATGTGTCGGTAAAAACCGGGGATCGTCATCCCGGAAAGAA
TGCGTACCGGAGACTATGgaaaatgtaactttttatgTTGATGATTATTC
GGGAAGGTTTCCACCCCCAACGGCTATTCTATCGAACCATACATCCTGCA
AAGAAAAATGTCGATTGAACAGTTCTGTCTGTAACGAGAATCAATCTTGG
GACCAGTTTGATTGTTCTTGCACATGTGCTGTCCAAAGCCCTCCAAAATG
TGAGGACCCTCTTTATTGGGACAGTCGCCATTGCGCATGCGTGTGTCCGA
AACAAGGACGGCCCAAACAGTGTAACAAATTCAAATACTTTTCTGAGGAT
TCTTGCGGTTGTATTTGTGAACCAAAACGTGAACGTAAATGTCGCCGTCA
AGGGCAGTTTTTGGATCCAGATACCTGTTACTGTACGCAATACCCGCCCT
ACGTTGAAGCACAGGAAGCGTTCGATTGTAGTCATGAAGGCGTGATATCT
AAAGTTGGACTTGTACTACTAATCATATTTGAGGCATTTGCTATTGTCAT
CGCGTTCGTTATGTACCGTAAATATTGTGCTTCCCGCGCGCCTTGTAACC
GCCCCAAACATTATCAACACGCGGACGATACCTTACCTGATGATAGATCG
CTAGATGGGAACGAACATGATAAATACTCTATAGATACACCAACGATAGG
TCTGCAATCAGGACAGATAGCTCTAAAACACAGAACGCAAAACACGAACA
ATAACAAATTATATATTAATAATGGAGGTGCTGGAAAAACGAGCTCTTCT
TCTTATGATGTTTTGATTAAAGAGCAAAGTACTGAATATCTTCATGACCA
AACTGAACCATATGATTGGAGACAGAGTTATAAGGATATGGTCAAAGTGT
GATCACGTCGTTACAACGTTGTAAAAACTCTATTAGATTCAGTAGAAGGC
TTTTCAGAAGTTCATTAAAATGGATGTCATATAGATAAATACTATTTGAT
AGAACCTAGACGTTTGATGTCAGATCGCCCTGATTGGTGGGAAAGTGCAT
TATATCCCGCGGAAATTGTGATCTTGATACAAAAAAACAGATGCTCTTAG
AATGGCATAATGGtgaaaaaatgtgattttaGTACCCATAGCAAACACCT
AAGAAAAGTAGAGTCGCTCGATACCTCTGTTAAGTAACAGCCTTTGTGGT
TGGTCAGGTGACAATAACAAATTGTTTGAATGTAATTCATAGCTATTTGC
AAAGGTCGAAATTATGATTTGATTTGATAACCTTTCCAACTAGTACACAA
CAATGCATTGGCATTAGAAACATGTGTTCTTTACGCTTTGTCCTAGTTGG
GATCGAATCTCTCAATACATAAAGTTTTAGATTTAGACCTACCTAGTTGG
TACTGTGGTACTGTACATGAGTTAGACCTCAATAATCATTTAAAAATCAA
CTTAGAAAATCAGTCAATTCAAAGATGACGTCTAAAGTAGACAGGCAAAT
GTATATACATTTTCTATCAAGTAATTAATAATGAAGACATTAATTATAAT
ATACTCTgtaaattttactaaaataaattatttattgAGATTATCATATT
ATTATAAATCAGTATTAGTGTAgtaatattttcataatttgatTCTAGCT
TTTGTTCGGTTt
Run BLAST on NCBI

protein sequence of TCONS_00003911-protein

>TCONS_00003911-protein ID=TCONS_00003911-protein|Name=TCONS_00003911-protein|organism=Clytia hemisphaerica|type=polypeptide|length=360bp
MINSEMIRMLYKYMVILSTLILYTQAQTQPRSQPEYHSACAPVLSYVETN
PDHKFEPLVVKLHRCVGKNRGSSSRKECVPETMENVTFYVDDYSGRFPPP
TAILSNHTSCKEKCRLNSSVCNENQSWDQFDCSCTCAVQSPPKCEDPLYW
DSRHCACVCPKQGRPKQCNKFKYFSEDSCGCICEPKRERKCRRQGQFLDP
DTCYCTQYPPYVEAQEAFDCSHEGVISKVGLVLLIIFEAFAIVIAFVMYR
KYCASRAPCNRPKHYQHADDTLPDDRSLDGNEHDKYSIDTPTIGLQSGQI
ALKHRTQNTNNNKLYINNGGAGKTSSSSYDVLIKEQSTEYLHDQTEPYDW
RQSYKDMVKV
Run BLAST on NCBI

transcript from alignment at sc0000038:580412..589326+

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00003911 ID=TCONS_00003911|Name=TCONS_00003911|organism=Clytia hemisphaerica|type=transcript|length=8915bp|location=Sequence derived from alignment at sc0000038:580412..589326+ (Clytia hemisphaerica)
GCTGGTCAATTGCATTTTTGAATCTTGGATGCAGCAAGAAGTAAAAGGTA TGTTATTTAATTCAAACTGATTCCTAAATATTTAACTTTCATCAATTATG TGTACTTTGAATCTATAACATTTCTCGAAAACATTTCttacaatattttg atttacaaGTAATTTGTCATTTTATGGATATATAGATCATCTTCAAAAAG TCGTTCGcgaaatttagcgaatttaagtttcgcgaattatggttttagtc gaaatttcacagatagaactttcgcgaattcatataaaatttaccttttt tggtaacaaaaactcatataacactcaaaaatttagcaaacagtgcaaaa ctgagaaggaaagtttattttttcgcgtttttcaggtttaatttcttacc tggcagaaacttttgcgaaaaaggatcaaaatcgcgaaaaatgCGAAAGT TTCTGTCCTTAAAGTATGCCTTCAAgtcaggccatttttcatgccttATT TGTAGTGTCCATTTATCGGATCCTGTCTCTTTTCAAATTGCCAATTTTGT GGTAAAAACAGTATTTATAGTAAAGAAACGCAAGAAGACGTTCCCTTTTT GAACACTAGTGCAGGCTGTTCTGCCTTTCTAAatggctacatacactaca caatatattgtcaggcaatatattgataataTATTGTTGAATGCCTgcaa tattgaaaaggtgtctgcaatatattgtcagcttgatttgcaattttcca acaatatagagggattgtttacagaaagaaaattccttttcatAATAGTT TAcatcgtacattacggtccgaaaacgatattgtcaaatattgtacgcca atatattgtgtagtcaatatattgtgtagtctaagtagcccttaaaaCGT GTCTTTTAGTCTAGATAAACCAAGAGCAACCGAGGCTAAACCAAAACTTA CTTTTTCTTATGAAGAAAACGCGTAGGTACGATCATTACCAAGGTCACGA ATCACATCCGGATATTGATTTTCCAGATAATTATTTTGTCTATTTGTGAC GTCACTCAATCCAAAACGTCATCAACTCTAGATTTTAGATCTTGTATGTC TTAGTAATATATTATATGCGAAACGGTATCTAATGAGTAGGTGTACGTTG TTTGTTTTGGTGAAGGGTGAATCAGAATGGGTGTTGAAGGCTCTTGATTT TGAATTATCTTGAATAAAATGTCACAATGTAGGTAGGTATAATCGAACAT ATATCTGGAAATCATGGCAAAAAAGCTTGCTACCTAATTTGGATGACACA TTTTTCTTGCCAGTGTTACAATATCATACTTCAGGTATTTGCTGTGTTTT CACACCCCTTTTTACAtacctggtaggattttttagccagtgggcagtag cgtggtgggtcgactaaaattcggGCAAACTGGAGAGGCAATATAAGAAC ACTTTGATTTTGGCGCTCGAAAAttgggtattttctctctttttggccga TTCGGCCATATCTAAGGTGTAAAGCTGGTAAAAGAGCAATGGGGCGCCGA AATTAGTTATCGGAGGCTTTATTTTGCGCACTTTGTATTTTGGCGCCCCC CAAAAAATcggccgctggggggggggggggcactgccAATCGGTTCTCTT TCGAACCGAACCCCAAATCGTTTCTGAAATTCAAATGAGAACATTGGTCA CCCTCCGTTATTCGAtacttattttcaccattttttgagaaattttgtcc atttttcctaagaaattgggtgttttaaagcccacaaagccttaaaatga taCTTAACTTAATATTTTGCACTTCGAAGCCTTAcatttttattcttata aaaaaacgtctaTATATTAGCTGTAGACCTTGATAAAGGAAACCCTGTAC ATTTTCTTATCCCGTCACCTTAAAAGCAGTAAGTGACACAGTAGGATGTC ACCGCATTACTctaaaaatataactgttcatAAAATTGGATTTGCTGATT CACCCATCGAGAGAATTTATTAAATCAGTCTTTTCTATTCCATGAAAGAA TTTATGtatacgcttttttataagaacagagtatataagaacataaagtt ACGAGGTGTAAAAAGACTTTGCAAATTTTAAACCatacaatttcttagga aattagGCCAAAGTATTCATAAAAGATcatttttaagctaaaaactCAAG GGTTTGACATCTGAAGATTGCTGGAAGCATGCTACTCTTGAGTAATGTAA ACTTTTTCAACTTGTcacaaaaataaatgaatttctgtccaactatattc actcaggagttttgggtggcagagcagcatatgcatttcgtccttattgg gactcgtcagcactgcgtACTGCACCCTGGCTGGCCAGATCGATTTAGTC AGCATTTCTAAACcacaaaatcacttgtggttcaaaCTGAGAGATatata attcaaaaaaagttaagaacatgtttaaaacgatgttcttataaaaaatg tgcagCCCACCATCATAATGAATACCATAGTGATGCTAAtatgttaattt ttcattctatGTGGGTGTCATCTCTATGACAATACATTGGGAGTTTTCGT TTAAATAAGTTTATTTATAGTCATGGAATTTCTATTAGGAACTAAGTATT TCTCAAGATTTGGTGGAAACTGTTCCATATTACGTATTCAACTTTTGCTT AGAATTCAATCGTTCAATTTGTTACTTGATTTTCAAACAATTCTGCCTTT TGTCTTCTCTGGCGTTTGTTTCGTTACGTTCAGAGTAGTGAGTTAATTAC AATGTTTTGTTGCACCGGATGTAGAAATTTGCTTTCGACACGAAAAACTC TGAAAGGTTTTGATCACGGACTTCACAGTCGGAGGCTTGAaccccagccc tcgttttcgtgGGTCAGGTTTATGTGATGATTATATGATCAGGCTTATGT GCAATGGTAGTTGAATCGAGGATACGGGACACCAAaggcatagatttata aagtccgaagggctagatttcgtgctttaagccatcgcaggcaaaaaaag tgaatgtcGGAAAAAATAACGTTgatattgttttcgaaaacccgcgaagc ttctgattggtcaagcgctgaaattctattgtaatgtcacgtgacttagg taggatttcctaccaaaccacggcacacttttcagcaaaagtacgccGCC TAGCCCTTtgagctttataaatctatgtttACAGCTCGAGCTTGGCTGGC CGCCAATctgccatcggaatatcaggcTGCCAGGCTAGACGGCTTGACTT TGATCTTTAGTCCGATATGTATTCTGCTTTACAAAACGATGAACAAAACC tgtcaatcttttttttcattataaCGTAGACATCAACGACAAATTCTTTC TTCACATCAAAATTCCCATACAGTACAAAGTAGGATGAGGTATTGATTGA ATTATGATGATTTTTTAACGGGATCTCTCACTGTCAGTGGGCTTAACGAA ATCTCTGAATTTTTGACATTCTTGTTGCCTTATAATGTGaattttgtcat tcttttttaaGATGATGTATTTTAACTGATGATATTCTCATGTTCAAAAT CATTTATCTGTAATAGAATAGTCAGTGTTTCGAACATTTGCTTTGTGAAG ACGGAGCTTTGGtgtgtttttgtttgatttataattggaaatgaaatttc aatCATTAGTGACTGATAGCTGATAGACAGACGCTTCAAATTTGTTACTG TAATTTAAAGTATGAAGAAGTCTACGGTATTAGACATTTTAGCACTTCCA TTGCAGATGCAAGTTTTTAGTTTAAAAGTTcaataaattatcaaaaaact tGCTTTATTGGTTCGTTTCAAGAAATGCTATAAGCCTTTCCCAAGAAAGA TTTAAATTGGCAACTGAGTTATTTATTTGCTGCTCACAGATACAATCATg gccgaaatatattgagaattccggcagattccggttattttaacgttttt caagatttaaagttccggcgagaaagtcgattttggatctctttaattta atcgaatatttcaatttgggagggcttggcagacttccaggctatagtCC CAGGCTTTTAACTCAGAGGTAAAACtatacccttccaacctactttagaa cacttacaaatcgattgtggtttcaaaacttcctggggaatttttttttc tcatatattatgaccttgattgtagcttTTTGTATCGCATTTGCTGCTGC CTACCGAAGGTCATATAGTAAAGGCAGTAAAGCGCAGTACTATTTACCAT GTGGTTTTATTATCTGTTTTGCACAATCAATTCCTCCACACACTTGATTA AAGGATAATAGCTTGCCAGCAGTTTTTAATTAAAGCTGTTAATTGttgtt tttgctttttgtaATGAATGACTTTGTGTTTGCGGATTGTTTGACAGAAA AAAGTTGTTGTTGAGTTTATGGATGGGTATGTGTCTTCTTTTGGTCTATA GCCAGCAGCCAGTTTTAAAGTAACGTCGACCATTTTAGTTGGAGTTCCTA GAAAGTCTTGCTGGTGTTACTACTTTTTGATTTACTCAAAGCTTTAAATT AGAAGATTATCAGTCAGAAGCAACCCAATATTTCTTTAGCCTttaatggg ggggggggctcacgGTTGCCGGTGAAtgggaatcggccctttttttgAAC GGAGTATCGGAATTAGTCTCTCTGTCGGAGACGGAGAATTGGGATATGTT AGTACAGAATaacgaaatttagcaaaaagtttcccagaattacggaaatt gttgttctttttcagatgaatttaaaaaaatcggggaaaaactGGTGGAA CTGTGGAACTGTGGAACAGTACTACTGCCCCTGAACCCCCTCCCTTATAG GACTTTTGATGTTCTAAGCTTGATATTCGTCCAAAGAAGACTAGTACAGT CtattaaaatttcttataaaaaaagacaccaatatggTTTTTAATACTCT ATATTATAAGTCGGATGATGTTTCATTGAcaatacatgatttttttctgt aaaacgTCCTTTTAAACAAATTATGGTTTATGTGAAAGTAAAAGGGTTTT ATATTTTAAAGAGACTTGATAATTTGAGATGATATGTGAGTGTAGTGATA AAAGAATTATAAGGTGATGGATTTGGTACACCAACAATACTTTAGGCTGT AAAAATTATTGCTTTAATCAAAGACCAAGGTGTGGTAAAAAAACTGAAAC GAAATCTAGAATTCAACCTTAACTtaactttaatttttgtttttttacaa aatttagtACGTATGTAATTCAAACACAATTTTGTCAACATCTAGGGCCG GCTCACTAAAGTGATGGCCAAGTGAAGAAATGTGCCAAAATTACTGgtct ctttttgttttattttaataattttaaacAAACCAAATTGTGTGTAATTG AGGCAGATTGAGGAGGTGCTGCTAAGAAAAGATTCTGACTGAAGAAAAGT TTATAGGAGGACGGTTTTTGACTAGATTTGACTTGGATGGTGATAAAGAT AACGTAAAATTAGGAGCGCGAGAGTTAAATATTAACTTTTCTTAGTTGTC TGGCATTGGCTGTCTGTTTGTTATTTTCAAGGTTGTTCAAAATTGAAGTA TGGTaataaaaatgttataaatacATCTGATGATCGTCTCTGGCGTAAAA CAGTCtgtaatgttttaattttttaaagaaaaataaattttgaatttagc tctactttggtatagagcactttgtCAACATAAATTATTGATGTTGTTGA AATGTTTGTAATCCATGAGGTAATCCATACTTTTTCTCATGGATGCCATG TTGAATTTAGAAAATCATCATGCCACGTGCTTTTGTGAAACCAAAACTGT CGTGACTATGAGGAAATTGGTTTTTGTAAGAAGTTGATGTGTGGAGTGGA TACTTAAGTgacaaataaaaacaacatattGGTTTCTTTTCGGTCATTCA GGAATTAGCGGATTAGCCTAGAAATCGTCACTGAAACATTCAAGGATGGA AAACGTGTTGTTTTCACGATATCAAGATTTGTATCTTTTTAAAGGAATAA CTCGGAATAATAATTGATTATAACTCGgactaaatttttaaaaatttgaa atgactCTGATTAAGTCGTTGAAAATTGGGAACAACTCGGACTAGAACGT TGTAAAGGTAATGTCAAGTGATTTAAGAGTATATTGAAACGATTGCATTG TTAATACTTAAGTAAAACTTTTAGTGTTGATTAAAACcattatttttgaa cttttcaacATAATGATCTATTTGTTCTTGCAGCATACAGAGCCCCGGCT TGAGCGCTGTAATGCGAATTATTGTAAATCCTATTGGCCtgatcatgaaa aatattttgaactcaGATTATTGTTTTATGTAGTCTATCTTTAGTCAGCT TCAACAATAACTCATGGACAAACAACCgagaaaatcttcatttttattgt cTTGGTAATAAAACGAGGGCACAAATTTGATACCAGAATCTGTTTCAGAc taattcacaagctttctcACTGATGTTCCTACGTAAAGgttgttttaaaa cttttcaaacgTGTTTAATATGAAGTGTTTTGATAAGATTGATGAcactg tttgttttggttttcaaaaataaatttttctctaCTCTGATTTCTTATTC AAATAAGTTTGTTGAGCTCTAGAGCTTATAATACTTTGAAAGAAAGAGTC TTGTTTATACTCTGTGATGTTTTGTCAAATAGTAATGTGAAAGTTGTCGG ATATCAAATCaggaaggaaattttttaaatctctcTTTAATGGCAATAAT TGCTCTCATAAAAGTTACAGTTGTTTTTGTTTCAAGAAAGAAACCTTTAT CAGCTATAGGTAGTCAAGGAGTTGGTACCTCTTTTTACTCCTATAACATT AGAGCTATTGATGTTGCTTGAGATCCGAACATTGGTTCCTGCcttacatt ttttatatttgacgAGGTATAGTTACTCATAATCAATGATTACTTTTcag gaataaacaaaaaaaaacgaaaatgatcAACTCCGAGATGATCAGAATGC TTTATAAATACATGGTCATACTCAGTACACTAATACTATACACACAAGCA CAGACACAGCCTCGTTCCCAGCCAGAATACCACAGCGCATGCGCACCAGT TCTCTCATACGTTGAGACCAATCCAGATCACAAATTCGAACCGTTGGTCG TCAAACTTCATAGATGTGTCGGTAAAAACCGGGGATCGTCATCCCGGAAA GAATGCGTACCGGAGACTATGgaaaatgtaactttttatgTTGATGATTA TTCGGGAAGGTTTCCACCCCCAACGGCTATTCTATCGAACCATACATCCT GCAAAGAAAAATGTCGATTGAACAGTTCTGTCTGTAACGAGAATCAATCT TGGGACCAGTTTGATTGTTCTTGCACATGTGCTGTCCAAAGCCCTCCAAA ATGTGAGGACCCTCTTTATTGGGACAGTCGCCATTGCGCATGCGTGTGTC CGAAACAAGGACGGCCCAAACAGTGTAACAAATTCAAATACTTTTCTGAG GATTCTTGCGGTTGTATTTGTGAACCAAAACGTGAACGTAAATGTCGCCG TCAAGGGCAGTTTTTGGATCCAGATACCTGTTACTGTACGCAATACCCGC CCTACGTTGAAGCACAGGAAGCGTTCGATTGTAGTCATGAAGGCGTGATA TCTAAAGTTGGACTTGTACTACTAATCATATTTGAGGCATTTGCTATTGT CATCGCGTTCGTTATGTACCGTAAATATTGTGCTTCCCGCGCGCCTTGTA ACCGCCCCAAACATTATCAACACGCGGACGATACCTTACCTGATGATAGA TCGCTAGATGGGAACGAACATGATAAATACTCTATAGATACACCAACGAT AGGTCTGCAATCAGGACAGATAGCTCTAAAACACAGAACGCAAAACACGA ACAATAACAAATTATATATTAATAATGGAGGTGCTGGAAAAACGAGCTCT TCTTCTTATGATGTTTTGATTAAAGAGCAAAGTACTGAATATCTTCATGA CCAAACTGAACCATATGATTGGAGACAGAGTTATAAGGATATGGTCAAAG TGTGATCACGTCGTTACAACGTTGTAAAAACTCTATTAGATTCAGTAGAA GGCTTTTCAGAAGTTCATTAAAATGGATGTCATATAGATAAATACTATTT GATAGAACCTAGACGTTTGATGTCAGATCGCCCTGATTGGTGGGAAAGTG CATTATATCCCGCGGAAATTGTGATCTTGATACAAAAAAACAGATGCTCT TAGAATGGCATAATGGtgaaaaaatgtgattttaGTACCCATAGCAAACA CCTAAGAAAAGTAGAGTCGCTCGATACCTCTGTTAAGTAACAGCCTTTGT GGTTGGTCAGGTGACAATAACAAATTGTTTGAATGTAATTCATAGCTATT TGCAAAGGTCGAAATTATGATTTGATTTGATAACCTTTCCAACTAGTACA CAACAATGCATTGGCATTAGAAACATGTGTTCTTTACGCTTTGTCCTAGT TGGGATCGAATCTCTCAATACATAAAGTTTTAGATTTAGACCTACCTAGT TGGTACTGTGGTACTGTACATGAGTTAGACCTCAATAATCATTTAAAAAT CAACTTAGAAAATCAGTCAATTCAAAGATGACGTCTAAAGTAGACAGGCA AATGTATATACATTTTCTATCAAGTAATTAATAATGAAGACATTAATTAT AATATACTCTgtaaattttactaaaataaattatttattgAGATTATCAT ATTATTATAAATCAGTATTAGTGTAgtaatattttcataatttgatTCTA GCTTTTGTTCGGTTt

Coding sequence (CDS) from alignment at sc0000038:580412..589326+

>TCONS_00003911 ID=TCONS_00003911|Name=TCONS_00003911|organism=Clytia hemisphaerica|type=CDS|length=1083bp|location=Sequence derived from alignment at sc0000038:580412..589326+ (Clytia hemisphaerica)
atgatcAACTCCGAGATGATCAGAATGCTTTATAAATACATGGTCATACT
CAGTACACTAATACTATACACACAAGCACAGACACAGCCTCGTTCCCAGC
CAGAATACCACAGCGCATGCGCACCAGTTCTCTCATACGTTGAGACCAAT
CCAGATCACAAATTCGAACCGTTGGTCGTCAAACTTCATAGATGTGTCGG
TAAAAACCGGGGATCGTCATCCCGGAAAGAATGCGTACCGGAGACTATGg
aaaatgtaactttttatgTTGATGATTATTCGGGAAGGTTTCCACCCCCA
ACGGCTATTCTATCGAACCATACATCCTGCAAAGAAAAATGTCGATTGAA
CAGTTCTGTCTGTAACGAGAATCAATCTTGGGACCAGTTTGATTGTTCTT
GCACATGTGCTGTCCAAAGCCCTCCAAAATGTGAGGACCCTCTTTATTGG
GACAGTCGCCATTGCGCATGCGTGTGTCCGAAACAAGGACGGCCCAAACA
GTGTAACAAATTCAAATACTTTTCTGAGGATTCTTGCGGTTGTATTTGTG
AACCAAAACGTGAACGTAAATGTCGCCGTCAAGGGCAGTTTTTGGATCCA
GATACCTGTTACTGTACGCAATACCCGCCCTACGTTGAAGCACAGGAAGC
GTTCGATTGTAGTCATGAAGGCGTGATATCTAAAGTTGGACTTGTACTAC
TAATCATATTTGAGGCATTTGCTATTGTCATCGCGTTCGTTATGTACCGT
AAATATTGTGCTTCCCGCGCGCCTTGTAACCGCCCCAAACATTATCAACA
CGCGGACGATACCTTACCTGATGATAGATCGCTAGATGGGAACGAACATG
ATAAATACTCTATAGATACACCAACGATAGGTCTGCAATCAGGACAGATA
GCTCTAAAACACAGAACGCAAAACACGAACAATAACAAATTATATATTAA
TAATGGAGGTGCTGGAAAAACGAGCTCTTCTTCTTATGATGTTTTGATTA
AAGAGCAAAGTACTGAATATCTTCATGACCAAACTGAACCATATGATTGG
AGACAGAGTTATAAGGATATGGTCAAAGTGTGA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_002190XLOC_002190Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00003911-proteinTCONS_00003911-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00003911-exon-sc0000038-1491911889:580412..580458TCONS_00003911-exon-sc0000038-1491911889:580412..580458Clytia hemisphaericaexon
TCONS_00003911-exon-sc0000038-1510915933:580412..580458TCONS_00003911-exon-sc0000038-1510915933:580412..580458Clytia hemisphaericaexon
TCONS_00003911-exon-sc0000038-1575043694:580412..580458TCONS_00003911-exon-sc0000038-1575043694:580412..580458Clytia hemisphaericaexon
TCONS_00003911-exon-sc0000038-1491911889:587462..589326TCONS_00003911-exon-sc0000038-1491911889:587462..589326Clytia hemisphaericaexon
TCONS_00003911-exon-sc0000038-1510915933:587462..589326TCONS_00003911-exon-sc0000038-1510915933:587462..589326Clytia hemisphaericaexon
TCONS_00003911-exon-sc0000038-1575043694:587462..589326TCONS_00003911-exon-sc0000038-1575043694:587462..589326Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000038supercontigsc0000038:580412..589326 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
1.47911 1.19858 0.518928 0.253845 1.88228 1.37641 1.31239 1.83043 0.64954 1.32644 0.907563 0.430104 6.80282 5.16551 1.85721 1.75187 5.50488 7.72614 8.1938 10.15 11.5011 11.8779 3.05742 3.43112 3.98131 5.28992 37.5065 47.0702 52.3261 47.7052
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR004153CXCXC_repeat
IPR029034Cystine-knot_cytokine
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00003911 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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