TCONS_00003902 (transcript) - C. hemisphaerica

Overview
NameTCONS_00003902
Unique NameTCONS_00003902
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length4907

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00003902 ID=TCONS_00003902|Name=TCONS_00003902|organism=Clytia hemisphaerica|type=transcript|length=4907bp
AGTAGATATTTGCTTTCAAATAGTAGAAACGGTGTACACTGATGAGACTC
GTAAAAATGGGACATGGGTTTCCTGTTGTTACATAATAGCTCACGTAACC
AAAGTTGTTAACATTTCACAACCTGAGAAGGGGGGGGGTTCTGGCTTCGC
TCGTGATTCAACATTATTATTCCTCCAGAGAAGggtatcaaaattagaaa
agggATGTCAAAATTAGACCAACTAAAAATTAAAGGATGTCATTTTTATA
GCCACCTATCTTGCAAGACAATGAACAGCTACTGGCTTCAGTAGAGTAGG
GTTTTCAAATTCAGCCATCTTATTGGTGGGAATTTAAAAAGTCTCACATG
CATTAACGTACAATTTATATCATTTGATTACTTTTAgcataaatcaaaaa
attagTATTAATCAACTTAAAAAATGCCTTTGTTTGGTAAAGCAAGTTTT
AAAGCTTCTAGAAAAGTTCCTAAACGGAAAGCAGATGCTGGCTCTACTGA
TCCCAGTCAGCTGAGTGATAAAAGCGCTTTGGATCCAAACCTAGATTTTT
CACAGACACCATTGAAACTCTCACTTGGtggtcaaaaaatgatttttcaa
aatggtgtaTGGATTGCTACAGATGAGCAAGGTAGCCAATCATCTATGAG
AGACAATGACTTATCGCATGCAGctaaagagaaaatattaacacttgaag
aagaaaataatatgTTGAAATACAAAATTGAATTACTTCTAGATATGCTT
GCAGTATCACAATCAGATATTCAATGCATGGAACAAGAAATTAACCAAAT
GAAGAAAGCTGTCGGGAATAAAGATTCTGGATATTCATAGTTCCTAGAGC
TTCTATAAGTTCCATCATTGTGATGTGAGCCAAGTATTTGGCGGTGATGA
TTTCAACACTTCAGCTTGTACATTCGTACATTGTATGATTCTGGCCAGCT
CTTAGGACTCTTATCAGCTTTGAAGAGGATCATTCAAGCAAGAATCATTT
GGCAGCTGTTTCCTTCGATCTGAAGTATTTCACAAACAGACTACTTTATT
CAAAGCTATTAACAGGAACATAATGATCACCAAAAACAGGAAAATCCTTG
CAACTGCTTGCAAAACAACCCATTCAACTTCATTGCAAAAGCTTGCAGAA
ATTCTTTGCCAAGTGTAAATGAATGTATAATGAATGAAATAGATAGATGG
TTTTTATTTATGGTGATTGATTCATAAGGGGCTGtcaacaaataaaaatt
aatactgtttaaatgatggatattttgattttataaatttgCTTATTATA
TGTAATTTATTGTACAATGAGATTTTTGAAATACATATTATAATGTTTCT
CACTGCCTCTCTTATCCGAGACATACACATAAAATAATTTTGACGTAtac
aattttttaataattacAGAATGACATATTCATcagtactctgtaccaga
gtgtaacCTCTGCGataaagtatgatttataaatgaCAACACTTCTGTCG
TCGTCTCCCGTCCCTCACTCACACTCCATCGCAGTGGTCGgtttgaaaat
tctcaaatcagaaaagacaCTTGAcaaatgacaacagaccctctacggca
atgaattttgaatagGTCTGTACAGACTAATTGATCAGAAAACTAGACCC
TTCTTCATgataatatttatattttttctagAATGATAAAAAGTAATGAG
AAAGTAAAGTGAAAAATGGACCCGTTGCAGAAGTTGTTGAACAATAACAA
ACCAAATTCATGGTATACTTGCAAGACACCTCTTATGAAGGATGTACCGA
TCAAACTCGATGTGGAGGACCGCAAAAATCTGATgtcattgaaaatgaaa
gcatgTAAAATAGAACAGAAAATCGAAGAAAGACGAAAGAGGAAGAGAGA
AGAGATGATGCAAGCTTGTCTATTTGTTCAACAGAAGATTCAGAGCCGAC
caaaaaagaaccaacaaagtTTATCATCAGCTTCGTCCAACACAGTCACT
CCAGAAAACACTCCCCATCCCCAAGAAAGGGCTACCCAGCTTCAAGGAAA
TGCTTCTTACCACCAAGAAAGGGCTACCAACAATCAAGTAAACACTCCCC
ACCTTCAAGATAACATTTCCCGCCATTACCAAGAGCCTGtagaacaaaac
aaaacaccAGAATTGCATCCAAGCATCTCTGAAAACAATATTGTCCAACA
AATGGATGAGCTGATGGACCTCAAAGATGAACAAGACGAACTTGAATCGT
GGTACGAAATCGAGAAAATCAAATTAGCTGCAAAATACGATCAAATGAGA
CTTGAAAACATACGTAGACAGAAATCCATCATAGAGAATAGTCATGATAT
GCTTGTAATGAGTGTAGAGAAAAATACACCTTTGAAGAGTTTTCAAAACC
AAAGTCATCAACAACTCGACTCTCCTGTGTTATTCCAAGATTCAGAATCA
AGCAGATATCATAGTGGAAGTATTACTCGTTCTTCACCTAACACCTCTGA
TTCGTCCCTACCCAAATCTTATAGTAGTAATCACTCACAGTCTGAGCAAC
AACAGAAAGTACATTTTACAATTACAAGCGAAAGTGATGAAAATCCTGTC
ATCACAAAAAGTCATTCACCATCCGAATGTATCAAAGGTATTGAAAGTGC
ACAAAACCAATATCCACCCCAATATGATATTCAAGACTCTTTGACCCACT
CTCAACAATCACCTAACCAACAAAATTCAGAACCAGAAATGATTTACCAA
GATCCACCAAGTAATGTGCTTCAGAATGGTCCAAGTCCTACCAGTGCAAC
CAATAGTTATTTTTCATCTCAAAATAATGCTTTGCAAAATCAAAGTCTCA
CCGATAATATGAATAATAGAAACGCAAACAGCTCTCCTAACAGCAATGCT
TCACAGAATCACCAAGAACAATCTAAACCAAATTCTGAGTTGAACAaccc
agaaaaattttcaagagaTTCTATCGCAAACATGGTTAGTTTTGGAAGCG
AACTCTTACTCAGACATTATCAATCAGTTGATGCCAAACTGCGAAGAAAA
AGTAGAGCCACGAAATTCTTTACAACACCCGAATCTAATAAGAAGAAACA
AGCTACAAAATTAATAACATATTCAACAGATTTATCGCCGTACCCAACAA
CAAACATTGAAGGTGATTTCAATACTCCAGGTAATGTTTTCACCAGCCAA
CTAACCACTCCTTGTACTGAGCAAAGAGAATTTCAACAGCCAACAGAATC
AACCAGGAAACTGATAAACAATAACCAAGAAAACACACCATATCCAGGAT
ACGTCAACAAATTCACTGAAGATTTGTCACCAGCTGTTCAATCACCGTGT
GTTGTCAACCAGAACCATATTGATACTCCTTTCCCGAAACCACAGAACCA
ACACCCTTACACTACAATAGATCAACGCCAATTCCAACAAAGAAACCATA
ACCTTTCCCATAACTCCAATCAAAACGCTGGTATACCTTTATCGAAATCG
ACTCTCCACATCCCATCCAAGTTAACCAATAAATCCATATCTACCCCAGC
TCTGAATCAAGATTCTCCACGTGTTACCAACAAAACAATTATGACAGTTT
CCACTCCGAACATACACGACAGTCAAGACTCAATAGAGAAAACATCGACG
CCGCATGAGGCTCAGCGATTCAGCAGCCCTAGACAAAATTTCCATCATCT
TTCATTAATTTATGGGGATGAAATTCCAAGAATGGATATCTGTAATGAGG
ACCAAAATCGGTCTTTCCACCAACAAAGATGTTCGCCACTGTTCGCTTTA
TACAAAGGTTTCATGGTACGTCGCTTGTTGAAAACAAGAAAAGTCAATGA
AATCATCAAGACAATTAAGGATACACGTTCATTTTTGAGTGACATCGATA
AAGAAAATCGTGGTAAATTCAATTTAGCCGATCGACAGCTTCGTACTCGA
CTGCTTGACGAGGTTTCAACTAAACAAGGGAAGCTGAATGACATTCTCAC
AATGTCACCCTCTGATCAATGGACCATTATCAAAAAGGATCGAAAACAAA
AGCAAGATAAGATTCAACAACCTCGAAATTCACGACCTTCTATGATGGTT
GACAAAAGACCAAAGACAGCTCCAGCAACCAAGAAATTATCTGCAGCCTC
TCTCAAAACTATGAAAAGACGTCAAGAGAATTTACACAATATCAACAACA
ACAGACCAAAGACAGCACCACCACCAAAAACGCCTGTTAAACAAGGAGTC
AGCAAGAAGACCGCATCTCAAAGACCAAAATCTACTGGACGAGGTGCATT
GAAACCGATCCAGAGTCCACATTCTCCGACCATGAAAAAACGATAATTAA
TTTTGGAGCATGCGTAATTTAAAGTTATTATTATGTTTTACTGTTATagt
attctttttgttttttttcttttgtgggGGAATTCATCTCTTCTGTCAGT
CCATCTATTATTTTGAATCCCAAATActttatctttagtttttccTCTCT
TCCAATTCTCTTCTTCGAATtgtttatcggcattgggccgataagctcca
gaccccctccccccttcctcttatcggccaaaatttttgaaaccaacttt
tacatcttcgaaaacacaatttttttccagCCATCGCGTTGATCTCGCTT
TCCACCCGTCTTCGTTGAGTTTTTGACTATTTGCACCAGcattgagtttg
ttcatacccgcattgatattgttaatcaaaacgaaAATTAAAAAGACGCG
ATGAAGTCGCAACATTTCGAAGGAAATGGCAGCAcgctggccaatgaaaa
aagagtttttttattaaagctaattcaaaactgtacttttaaagttgCGA
ATTTGTGCGCgaaggtgaaagcaagtgaaattgtatgctttcagtggagt
ttgtgga
Run BLAST on NCBI

transcript from alignment at sc0000038:519762..534642+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00003902 ID=TCONS_00003902|Name=TCONS_00003902|organism=Clytia hemisphaerica|type=transcript|length=14881bp|location=Sequence derived from alignment at sc0000038:519762..534642+ (Clytia hemisphaerica)
AGTAGATATTTGCTTTCAAATAGTAGAAACGGTGTACACTGATGAGACTC
GTAAAAATGGGACATGGGTTTCCTGTTGTTACATAATAGCTCACGTAACC
AAAGTTGTTAACATTTCACAACCTGAGAAGGGGGGGGGTTCTGGCTTCGC
TCGTGATTCAACATTATTATTCCTCCAGAGAAGggtatcaaaattagaaa
agggATGTCAAAATTAGACCAACTAAAAATTAAAGGATGTCATTTTTATA
GCCACCTATCTTGCAAGACAATGAACAGCTACTGGCTTCAGTAGAGTAGG
GTTTTCAAATTCAGCCATCTTATTGGTGGGAATTTAAAAAGTCTCACATG
CATTAACGTACAATTTATATCATTTGATTACTTTTAgcataaatcaaaaa
attagTATTAATCAACTTAAAAAATGCCTTTGTTTGGTAAAGCAAGTTTT
AAAGCTTCTAGAAAAGTTCCTAAACGGAAAGCAGATGCTGGCTCTACTGA
TCCCAGTCAGCTGAGTGATAAAAGCGCTTTGGATCCAAACCTAGATTTTT
CACAGACACCATTGAAACTCTCACTTGGtggtcaaaaaatgatttttcaa
aatggtgtaTGGATTGCTACAGATGGtataactttttgttaaaaCTTGTA
TTTTGAAGCTTTCAAATGTAAGACCAGACCCGATTggaatttctaaaaat
cttaTTCTAAATTATGATTAATAATACACAATGACACAAATAAACTACAG
TTGAAACTTGCCTGACTATTTTAATTATAAACCATCAATTGTATTATCAA
tgctttttttcctcttttattTTAAACTGCAGAGCAAGGTAGCCAATCAT
CTATGAGAGACAATGACTTATCGCATGCAGctaaagagaaaatattaaca
cttgaagaagaaaataatatgTTGAAATACAAAATTGAATTACTTCTAGA
TATGGTTTGTAATGAAAAATCAACTACCTATTGCTGTATAGTTTTTAAAG
TACTTCAAATTCATCAATCAATCATTTAAGATAAATCTGATAAGATCAAT
CTGATttataatattatatttttggATTTACATATTTTAAAAAGCTTGAA
ACCTGTTGTGAGTTATGTTTTCATTCTTTAAAATAGGTCATTTccttaaa
gtttaaagttttttatataaaaacactGTCACAATGTTTTAAATCTATAT
TACACATTTCTTTATAGCTTGCAGTATCACAATCAGATATTCAATGCATG
GAACAAGAAATTAACCAAATGAAGAAAGCTGTCGGGAATAAAGATTCTGG
ATATTCATAGTTCCTAGAGCTTCTATAAGTTCCATCATTGTGATGTGAGC
CAAGTATTTGGCGGTGATGATTTCAACACTTCAGCTTGTACATTCGTACA
TTGTATGATTCTGGCCAGCTCTTAGGACTCTTATCAGCTTTGAAGAGGAT
CATTCAAGCAAGAATCATTTGGCAGCTGTTTCCTTCGATCTGAAGTATTT
CACAAACAGACTACTTTATTCAAAGCTATTAACAGGAACATAATGATCAC
CAAAAACAGGAAAATCCTTGCAACTGCTTGCAAAACAACCCATTCAACTT
CATTGCAAAAGCTTGCAGAAATTCTTTGCCAAGTGTAAATGAATGTATAA
TGAATGAAATAGATAGATGGTTTTTATTTATGGTGATTGATTCATAAGGG
GCTGtcaacaaataaaaattaatactgtttaaatgatggatattttgatt
ttataaatttgCTTATTATATGTAATTTATTGTACAATGAGATTTTTGAA
ATACATATTATAATGTTTCTCACTGCCTCTCTTATCCGAGACATACACAT
AAAATAATTTTGACGTAtacaattttttaataattacAGAATGACATATT
CATcagtactctgtaccagagtgtaacCTCTGCGataaagtatgatttat
aaatgaCAACACTTCTGTCGTCGTCTCCCGTCCCTCACTCACACTCCATC
GCAGTGGTCGgtttgaaaattctcaaatcagaaaagacaCTTGAcaaatg
acaacagaccctctacggcaatgaattttgaatagGTCTGTACAGACTAA
TTGATCAGAAAACTAGACCCTTCTTCATgataatatttatattttttcta
gAATGATAAAAAGTAATGAGAAAGTAAAGTGAAAAATGGACCCGTTGCAG
AAGTTGTTGAACAATAACAAACCAAATTCATGGTATACTTGCAAGACACC
TCTTATGAAGGATGTACCGGTATGTATtatcaacttcagttgagctaaaA
CTGTAACTGTGTGTGTGTAGTCCCTTGACAGCCTGGAGACCTACAAAATG
GTTCGCCTTAAAATATagtttgccttaaaaaatgagttgccttaaaaaat
ggttCGCCTTAAGAAATGGTTCGCCTTGAAAAATAGTTTGCCTTAAAAAA
CGGTTCACCTTAAAAATGGGTTGCCTTTTAAGGAATGGTTGCCTTATTAA
AGAATGGTTGAATTAAATACACCCCTTTTTAACTCATCCATGATTGTTCt
agtttaaaattttgattttttgagattGGGGATGAGTTTTTCACTTCTTC
TACAATCGGGCTTTGTGTTTTTTTGTgggttgattttcaaatttcttatt
acTACTTCAGATCAAACTCGATGTGGAGGACCGCAAAAATCTGATgtcat
tgaaaatgaaagcatgTAAAATAGAACAGAAAATCGAAGAAAGACGAAAG
AGGAAGAGAGAAGAGATGATGCAAGCTTGTCTATTTGTTCAACAGAAGAT
TCAGGTTATTCGAGTTAAATTTGACCATTCGTTTAATGACCCAGGTTGTA
GAACAATTTGCCTAactcatcaaaatattttgagcccTATTGGGccattc
ttggacttttggactcagagttaaaactctacccttccaacctagaattt
agagcgcttccaaatcgtttgtggttgtaagattttgtgggaatttccct
tttttctcaaatattatgactttgatttgaTTGTACCACATACTAGTATT
GCTAATTAGGCAAATTCCTGGAAGACAGAAAATATTTCAccactgcaaaa
aaaatatttgttgtttTCACACTTATTTTGCTTTCAGAGCCGACTTAAGG
TTGATTTCAATGCTTCTTTCAGAGCCGACcaaaaaagaaccaacaaagtT
TATCATCAGCTTCGTCCAACACAGTCACTCCAGAAAACACTCCCCATCCC
CAAGAAAGGGCTACCCAGCTTCAAGGAAATGCTTCTTACCACCAAGAAAG
GGCTACCAACAATCAAGTAAACACTCCCCACCTTCAAGATAACATTTCCC
GCCATTACCAAGAGCCTGtagaacaaaacaaaacaccAGAATTGCATCCA
AGCATCTCTGAAAACAATATTGTCCAACAAATGGATGAGCTGATGGACCT
CAAAGATGAACAAGACGAACTTGAATCGTGGTACGAAATCGAGAAAATCA
AATTAGCTGCAAAATACGATCAAATGAGACTTGAAAACATACGTAGACAG
AAATCCATCATAGAGAATAGTCATGATATGCTTGTAATGAGTGTAGAGAA
AAATACACCTTTGAAGAGTTTTCAAAACCAAAGTCATCAACAACTCGACT
CTCCTGTGTTATTCCAAGATTCAGAATCAAGCAGATATCATAGTGGAAGT
ATTACTCGTTCTTCACCTAACACCTCTGATTCGTCCCTACCCAAATCTTA
TAGTAGTAATCACTCACAGTCTGAGCAACAACAGAAAGTACATTTTACAA
TTACAAGCGAAAGTGATGAAAATCCTGTCATCACAAAAAGTCATTCACCA
TCCGAATGTATCAAAGGTATTGAAAGTGCACAAAACCAATATCCACCCCA
ATATGATATTCAAGACTCTTTGACCCACTCTCAACAATCACCTAACCAAC
AAAATTCAGAACCAGAAATGATTTACCAAGATCCACCAAGTAATGTGCTT
CAGAATGGTCCAAGTCCTACCAGTGCAACCAATAGTTATTTTTCATCTCA
AAATAATGCTTTGCAAAATCAAAGTCTCACCGATAATATGAATAATAGAA
ACGCAAACAGCTCTCCTAACAGCAATGCTTCACAGAATCACCAAGAACAA
TCTAAACCAAATTCTGAGTTGAACAacccagaaaaattttcaagagaTTC
TATCGCAAACATGGTTAGTTTTGGAAGCGAACTCTTACTCAGACATTATC
AATCAGTTGATGCCAAACTGCGAAGAAAAAGTAGAGCCACGAAATTCTTT
ACAACACCCGAATCTAATAAGAAGAAACAAGCTACAAAATTAATAACATA
TTCAACAGATTTATCGCCGTACCCAACAACAAACATTGAAGGTGATTTCA
ATACTCCAGGTAATGTTTTCACCAGCCAACTAACCACTCCTTGTACTGAG
CAAAGAGAATTTCAACAGCCAACAGAATCAACCAGGAAACTGATAAACAA
TAACCAAGAAAACACACCATATCCAGGATACGTCAACAAATTCACTGAAG
ATTTGTCACCAGCTGTTCAATCACCGTGTGTTGTCAACCAGAACCATATT
GATACTCCTTTCCCGAAACCACAGAACCAACACCCTTACACTACAATAGA
TCAACGCCAATTCCAACAAAGAAACCATAACCTTTCCCATAACTCCAATC
AAAACGCTGGTATACCTTTATCGAAATCGACTCTCCACATCCCATCCAAG
TTAACCAATAAATCCATATCTACCCCAGCTCTGAATCAAGATTCTCCACG
TGTTACCAACAAAACAATTATGACAGTTTCCACTCCGAACATACACGACA
GTCAAGACTCAATAGAGAAAACATCGACGCCGCATGAGGCTCAGCGATTC
AGCAGCCCTAGACAAAATTTCCATCATCTTTCATTAATTTATGGGGATGA
AATTCCAAGAATGGATATCTGTAATGAGGTATAATCAAACTTTTCCTAAA
ACCTTAACTTTCGCCAATGCGATCTTCAAAAAAACTCGGATAAGTTCTCT
AAGCTGTATTGATCCCTTCTACTCAATCTATcgcttccataatggtggaa
attacgtaacttgaCGAAACCTAACAACCCTGAATTAACATTTAGCTGAA
AATTAGACATTATTTTAACTGTACAGATATCTCAAAACCTTTTGTTTTCA
GCAGGACCAAAATCGGTCTTTCCACCAACAAAGATGTTCGCCACTGTTCG
CTTTATACAAAGGTTTCATGGTACGTCGCTTGTTGAAAACAAGAAAAGTC
AATGAAATCATCAAGACAATTAAGGTAAGAATTAGCCATTGGGTTTGAAG
CCCGAAGGGCTGGAGTAGAACCTCTAACCTTtcgcaggcaagaaaaagtg
aagccacttatttcccatccagaacacatgtagaacgcgccgcaatcatg
acgacgaatTGTATCTAGTGGCTCCTTCGTTTTTgaagactacatttttt
gaaatctagcgataactttcaatccggcgtttgtgtaaaaaccaagCACG
GGCGTTccggatgggaaataagtggcttcatttcccatcctggagtctcg
agtctagcgcTTAGGGCTTGGAAATCAATGGAATTAGCAATGTTTTTGGC
CCCTTACTTTGTTTTTACCAGGCACAGTTTGGAGGTTCGCCCGGGCTCGC
CTTTTTGTTATTGAAATATTGCTATTACTACAAGGCGTGTTTTAACGGCC
ATACAGCGttttattgacattttagaaGGGATGTTGCATTCCCGGGCTTT
TGTTTCGGTCCCCTGTTAGGTAAGATTGGTCTTTGAGTATCTTTGGTGCA
AGattttggatttgtttagacAACACTTTTACAACGATATGTCCATGACA
TAATCTTTAGTACATTAATACCCGGAATGGCCGGGGGTACTGCGGCATGA
TATCGACCCTggttttcgcgaaaatttgtctTACTACCACCACTCTCTTT
TTAATATAATACCTGGTANATGATATTCAAGACTCTTTGACCCACTCTCA
ACAATCACCTAACCAACAAAATTCAGAACCAGAAATGATTTACCAAGATC
CACCAAGTAATGTGCTTCAGAATGGTCAAAGTCCTACCAGTGCAACCAAT
AGTTATTTTTCATCTCAAAATAATGCTTTGCAAAATCAAAGTCTCACCGA
TAATATAAATAATAGAAACGCAAACAGCTCTCCTAACAGCAATGCTTCAC
AGAATCACCAAGAACAATCTAAACCAAATTCTGAGTTGAACAacccagaa
aaattttcaagagaTTCTATCGCAAACATGGTTAGTTTTGGAAGCGAACT
CTTACTCAGACATTATCAATCAGTTGATGCCAAACTGCGAAGAAAAAGTA
GAGCCACGAAATTCTTTACAACACCCGAATCTAATAAGAAGAAACAAGCT
ACAAAATTAATAACATATTCAACAGATTTATCGCCGTACCCAACAACAAA
CATTGAAGGTGATTTCAATACTCCAGGTAATGTTTTCACCAGCCAACTAA
CCACTCCTTGTACTGAGCAAAGAGAATTTCAACAGCCAACAGAATCAACC
AGGAAACTGATAAACAATAACCAAGAAAACACACCATATCCAGGATACGT
CAACAAATTCACTGAAGATTTGTCACCAGCTGTTCAATCACCGTGTGTTG
TCAACCAGAACCATATTGATACTCCTTTCCCGAAACCACAGAACCAACAC
CCTTACACTACAATAGATCAACGCCAATTCCAACAAAGAAACCATAACCT
TTCCCATAACTCCAATCAAAACGCTGGTATACCTTTATCGAAATCGACTC
TCCACATCCCATCCAAGTTAACCAATAAATCCATATCTACCCCAGCTCTG
AATCAAGATTCTCCACGTGTTACCAACAAAACAATTATGACAGTTTCCAC
TCCGAACATACACGACAGTCAAGACTCAATAGAGAAAACATCGACGCCGC
ATGAGGCTCAGCGATTCAGCAGCCCTAGACAAAATTTCCATCATCTTTCA
TTAATTTATGGGGATGAAATTCCAAGAATGGATATCTGTAATGAGGTATA
ATCAAACTTTTCCTAAAACCTTAACTTTCGCCAATGCGATCTTCAAAAAA
ACTCGGATAAGTTCTCTAAGCTGTATTGATCCCTTCTACTCAATCTATcg
cttccataatggtggaaattacgtaacttgaCGAAACCTAACAACCCTGA
ATTAACATTTAGCTGAAAATTAGACATTATTTTAACTGTACAGATATCTC
AAAACCTTTTGTTTTCAGCAGGACCAAAATCGGTCTTTCCACCAACAAAG
ATGTTCGCCACTGTTCGCTTTATACAAAGGTTTCATGGTACGTCGCTTGT
TGAAAACAAGAAAAGTCAATGAAATCATCAAGACAATTAAGGTAAGAATT
AGCCATTGGGTTTGAAGCCCGAAGGGCTGGAGTAGAACCTCTAACCTTtc
gcaggcaagaaaaagtgaagccacttatttcccatccagaacacatgtag
aacgcgccgcaatcatgacgacgaatTGTATCTAGTGGCTCCTTCGTTTT
Tgaagactacattttttgaaatctagcgataactttcaatccggcgtttg
tgtaaaaaccaagCACGGGCGTTccggatgggaaataagtggcttcattt
cccatcctggagtctcgagtctagcgcttaggcttggaagtcaatggaaT
TAGCAATGTTTTTGGCCCTTACTTTGTTTTTACCAGGCACAGTTTGGAGG
TTCGCCCGGGCTTACCTTTTTGTTATTGAAATATTGCTATTACTACAAGA
CGTGTTTTAACGGCCATACAGCATTTTATTGACATTTTGGAAGGGCTGTT
GCATTCCCGGGCTTTTGTTTCGGTCCCCTGTTAGGTAAGATTGGTCTTTG
AGTATCTTTGGTGCAAGattttggatttgtttagacACCACTTTTACAAC
GATATGTCCATGACATAATCTTTAGTACATTAATACCCGGAATGGCCGGG
GGTACTGCGGCATGATATCGACCCTGGTTTTGGCGAAAATTTGTCTTACT
ACCACCACTCTCTTTTTAATATAATACCTGGTACTAACGTTTTTGAGGAA
AAAGGGGACGTCCAACCAATAGCGTTGTGGCAGGGGACCGGGTGACACGC
CCCCCCaccccccagcggagcttttttgaaggagTGCCGAAGAGCAAGGt
gcgccaaaagagattttttaaacgccccaatcttaaaaatcatattttat
gcgccttaaattgtGCCCCAGGAccataattttaaaatacttgcaatttt
tttcgctcgcaataaacttctttgcaatctagctaatttacaagtttgtg
tacaatatagcatcattaaatgaaaatttaactttctttttcagcatttt
gagcctcaaattgttatTCTGTTCTTAATTGTAGTGTGAAATTAAGGTAT
TTCAAgctttttacccaatttttactactatgaacgccactttggaaaat
ttgggggggcgccatttaaaaaaaattgactttggctcCTCCAggaaaat
tttcccacaacgccactgcgtCCAACCCTATTTAGAAACCggttataaaa
aaaaatcggtTCACCACCTTAGACACAACAGCCATGAATTGCCTGGCATT
TTCGGGTGTTATTTAATAGAATAGTTCATATCTTAAATTTCACCTACATC
CCTTTTTAATCGGTTTACTTCACCTTGCTTAATACTTTAATTAATAGCAC
taattttcttttgtaaaaacaattttataataacNCTACTTTAAATAATA
GCACTAATtttcttttgtaagaacaattttataatagcattgaggctcaa
aatcgccaaaaaataagagcaattttaagaacaatgctgaccCTGGAATT
ACTAAATTCCAAGCAATTTAGGgttcaaagtagtaaaaatttggtaaaaa
gcCTTAATTTCACCCTATAATTAAGAACAGGATAACAATTTGAGTCTCAA
AATgctgaaaaagaaagaacaactgAACTTAATCAAAAATCTActtgttt
cttataaataataGAATGTACTCTTGATATTTCTTTGTGTAGGATACACG
TTCATTTTTGAGTGACATCGATAAAGAAAATCGTGGTAAATTCAATTTAG
CCGATCGACAGCTTCGTACTCGACTGCTTGACGAGGTTTGTTACTCTtat
aattcaattttctttgttatgatataaaaaagaggcgcgcctctatgctg
acaaagcagagtaaacaaaagaatttctctaAATGTGAGATCGCGCAGCG
TCGAAGGTGGAGAAAATTGCTCTTTCTTTTGTTAGAAAAATGCTGTTCAA
GCGTATGGTCGGAGATGATGTTAAATGATGTCTTCTAATCCAACATTATT
TTGATTTGCTATAATTTTATCTCGGATGTTTTATTGTCCAGTTTAGTTCA
TCATACCATAAAAAGATGGAAGAGATAACAACTTCTTCAAATCGACGTTT
TCTGAGAAATTAGTAAAACAGAttgataatttcaaactttaatttttcta
ttcttCCTCCAATTATTGCCCTTgatgttggaaaaaaatgtttattttac
tCAAAACCTTTTAGCCCTGTTAGACTGTTAGCCCTAGCCTAGTTAAAACT
AAGCCCAATTCACAAGGCTAGAACACACGGCTAGAACACACGGCTAATAC
CAATATAGCGTTTTCAGTGCTTTAAAGATTtcttatatttacggatttta
actTTGtcccatcagatttatcctagtgactgaatcaacCTAGCTTAGAT
ATTAACCATGCGTACGTTCTCAAACATAAAACCATCCAAACTCCTAACTT
CCTAAACTGATGGTTGCATCAAATACACGTAACCAGTGCTGTTGGTCAAG
AAAAAGTGTACGGTTTCTagtaaataaacaaacttcttctattgtttaag
tgacgttttgggtggaaaatttcaaaagttctcagactctccagtggtgc
atatcatgaatattgtaGTTGAACACCATTTAAAGACTAAAGACTCTCGT
ATATAATTTTAGGTTTCAACTAAACAAGGGAAGCTGAATGACATTCTCAC
AATGTCACCCTCTGATCAATGGACCATTATCAAAAAGGATCGAAAACAAA
AGCAAGATAAGATTCAACAACCTCGAAATTCACGACCTTCTATGATGGTA
TGTTTGTCTTTGTTCGAATGTTCATATCTTTCATCTCTTTGTGTACACTT
GTCTGTGTATTGCtgtattgaataacaaattttgAGGGAGCGACGGTCGA
GTGATCGATGACAGCGCCTGAAACCAGTGGTTCCCGACTTGATCACAAAC
TGCTTCCAACTCACAAGGCTCGAgataacgatttcaagtgggtctGACAA
CATTTTTCGATctggttgctttagcttgagaATTATGATTTTTCGGTCGA
CAATGAGCAATTGTTTTAAGACCTGTGATAAGTTTTGCACTTATCATCCT
TCCCATCTTATCATTCGCGTCCTAAAACTTCAATCATCTTATTTTCAGGT
TGACAAAAGACCAAAGACAGCTCCAGCAACCAAGAAATTATCTGCAGCCT
CTCTCAAAACTATGAAAAGACGTCAAGAGAATTTGTATCTTTTTCTATAA
GCTAATCCTTTAAGTGTCAATGTCGggtgggctatataggaggacGAAGC
CCTTCAGTAATGCCCTGTTTGAGtaagaaatcgtcatttttggtctaact
cgtaggaattggattgagcttcatggtcaagcaaaaacaaaaattaaaag
tgaGTTTTTTCCAGCGatattttaagccaaaaagtaaaaaaatgcaaaaa
tgtgacaaaaatccacttttttgagattttgaccgtttttcgACCATCAT
TCTTGATCAatgagtgatccaagaacctccaaatttcgCCCTGCATTACT
CGATTCTGTCTTCCAGTGAAGTAGTTtaaagttttaccactgggcgcCTT
TCCGTCATTCAGGCAGGtgcccaaaagaaagaggaaaCTCTAAGCTATCC
AGCGAGCTatgaacgagcttctaactccttctagaacCAGAGATATCGCa
gcttttaaagtttgaactagtgattttctttaaaaacttagaaaaaaagg
gCCGTGAAACTTACAGGGTCAAGCAAAGTATTCTACTATTTTTTTCAGGG
TCATTAACCATATTTTTCTTGGCGAGGGGCTTTTAAATAGGGGTTTCCTC
GAAAAAAGTTAGTTCTTGCTACTAAAAAGGGAGTGAGGGCACCTAAGaca
aattttcctaaaaaacagTACTCCCTTTCCACCtgtaattgaaatgaatt
tccaAAGGCATTCCAAAAGTTATCATAATCTGTCATTTATATAGGGCGTT
CACACTCAAAAGATGCAACGGTCCAGAATGTGACGGAACGCGACGTAGCA
tacttagaccatgttcacactaTACTCGATAGCTTTTCGAAAAGATTCGA
TAGCCCATCCGATATAATGTGAACACTTCGGCATGAAACGCTACAAAGAA
CTCTCTTTGTTTACTGTGTTCGTTCACATTTGATGTAACGATAAAAAAGA
GTAGTATTAATATCTCAAAAAATTATTATCGTCTCGAAAATAATATCGGA
TAGGGTCACTCAAAAGATGCACCGGTCCAGAATGCGACGGAACGCAACGT
AGCACACTTAGGACATCGTATCGTCTCAACACCTATCCGCTAGAAAAATC
GGTTCGATAGATTTTCTATCGTGTCGAAAATCATATTAGATAGGGTGTCC
ACGAACCAGTTAGTGGATTTCAGCAGCCTACTCTCGAATACCTATTAGCC
GGGGTATTGGAATAagcggtgggggggggggggggaaaatctcaaaactt
aataagtggggcagggggtggaataaaaatgtcctgggtggaaaacttta
aggaggctaatacagcagaattaggacaaaagagggaactttcaaaaaca
ttttcccaaaaattaataagcggggggaaggttggaataagaatgtcctg
ggtggaaaattttcgaaaaattaattaccgGGGGACGgatattaggtacc
cgagagtaggttgTATAAAGATGTTCAGAAAATGTAATGAAAGGGAGGGT
TGAGAATTTTTGTTCTTCACACCTTACTTATCTGGTAAAACATATTTTGT
TAAAGGGTGATGAAAAATCGCTAGGCAATACAAATTTTATACTGACATTC
TTTTTGAATGGAGTCTCTTCTGAAGCTATAAATATCAAGAGTAATCGAGT
CAAATAAATATCAAGTAATCGAGTCAAAAATATCACTTAAACCATCGTTT
CTTCCTTGACTACAACTTTTCTCGTTACTTAAAAGACACAATATCAACAA
CAACAGACCAAAGACAGCACCACCACCAAAAACGCCTGTTAAACAAGGAG
TCAGCAAGAAGACCGCATCTCAAAGACCAAAATCTACTGGACGGTATGTT
TCTAGATAGAGAAATTTACAAGGCTGAAAATGCTTGAAGGATGCTTATAA
TTCGAAGCAAAATGTTaggaaaattctgaaaatcagtaaaatctcAACCA
AACACGGTATTTCGGAACCGTTTGGTCTCGAGACGAAGTGAAACCATAAC
GTCTGAACATAGTCATAACCTTTGCTATGATCTTCCGCACGATATTCCTC
ATCATTCCTGATTATaactctttttggacctaccccggtggaggtcctat
aaattaacctttgtccgttcgtctgttcgttcgttcgttcgtttgttatt
agctttcctcatgattggNNcgcataactataaaccctcgaatgtgacgg
agcccgattttcaaaaaaaaagttttttgggcaaatttgggccaaaaaac
ggctaaaaaacgggttttttggactttgtgaaaaattaggtcattaattt
tttctgtttttttgcatgaaagtagggtaccatcgtaggtaaaagatggc
ttaagcgaatttttgcaaaaaaattttgttggctcaaaaaacgcatgttt
atctataagaatcactattcataagcatacatcaatgttcttagtcaaat
tactcaatttttttatgagattttgctcaggagggcttgcttttaaagaa
tatgtgtttcgacatgaaattttggttgcttggcgtgtttttataaaata
actggccaaattcgatatttttttacaagcacattatcaattacttaggt
attagcttttctcgagattggctctttcattctttacgatTTTTTGAACA
AAGATGCATAACTATAAACCCTCGAATGTGACGGAGtccgattttcaaaa
aagattttgggcaaatttgggccaaaaaacggctaaaaaatgggtttttt
ggactttgtgaaaaattggatcattaatttttactgattttttgcaggaa
agtaaaggtactatcataggtaaaatacggttcaagcagatttttgcaaa
aaaattgtagttggctcaaaaaacgcatgtttatctataagaatcactat
taataagcatacatcaatNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNgtat
tagcttttctcgagattggctcttttattctttatgattttttgcacaaa
gatgcatagctataaaccctcgaatgtgacggagctcgattcttgggaaa
aaaaatttggggcaaatttcagctaaaaagagatgtttttttgctctcga
agccttgaatatgaaagaatatttcaagagcatgaaattttggtttctaa
acgtgtttttttataagaaacaaacgactaattttaatagatcgtcacta
tttgtgttttgattgattgtttaatggtcacgcttatgtagatatcaatt
atatatgtgttaaatgcataaccaggtaggtccataaaagtatcacttgt
ttttttcgGTTTTAGAGGTGCATTGAAACCGATCCAGAGTCCACATTCTC
CGACCATGAAAAAACGATAATTAATTTTGGAGCATGCGTAATTTAAAGTT
ATTATTATGTTTTACTGTTATagtattctttttgttttttttcttttgtg
ggGGAATTCATCTCTTCTGTCAGTCCATCTATTATTTTGAATCCCAAATA
ctttatctttagtttttccTCTCTTCCAATTCTCTTCTTCGAATtgttta
tcggcattgggccgataagctccagaccccctccccccttcctcttatcg
gccaaaatttttgaaaccaacttttacatcttcgaaaacacaattttttt
ccagCCATCGCGTTGATCTCGCTTTCCACCCGTCTTCGTTGAGTTTTTGA
CTATTTGCACCAGcattgagtttgttcatacccgcattgatattgttaat
caaaacgaaAATTAAAAAGACGCGATGAAGTCGCAACATTTCGAAGGAAA
TGGCAGCAcgctggccaatgaaaaaagagtttttttattaaagctaattc
aaaactgtacttttaaagttgCGAATTTGTGCGCgaaggtgaaagcaagt
gaaattgtatgctttcagtggagtttgtgga
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_002187XLOC_002187Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00003902-exon-sc0000038-1491911889:519762..520386TCONS_00003902-exon-sc0000038-1491911889:519762..520386Clytia hemisphaericaexon
TCONS_00003902-exon-sc0000038-1510915933:519762..520386TCONS_00003902-exon-sc0000038-1510915933:519762..520386Clytia hemisphaericaexon
TCONS_00003902-exon-sc0000038-1575043694:519762..520386TCONS_00003902-exon-sc0000038-1575043694:519762..520386Clytia hemisphaericaexon
TCONS_00003902-exon-sc0000038-1491911889:520594..520715TCONS_00003902-exon-sc0000038-1491911889:520594..520715Clytia hemisphaericaexon
TCONS_00003902-exon-sc0000038-1510915933:520594..520715TCONS_00003902-exon-sc0000038-1510915933:520594..520715Clytia hemisphaericaexon
TCONS_00003902-exon-sc0000038-1575043694:520594..520715TCONS_00003902-exon-sc0000038-1575043694:520594..520715Clytia hemisphaericaexon
TCONS_00003902-exon-sc0000038-1491911889:520979..522030TCONS_00003902-exon-sc0000038-1491911889:520979..522030Clytia hemisphaericaexon
TCONS_00003902-exon-sc0000038-1510915933:520979..522030TCONS_00003902-exon-sc0000038-1510915933:520979..522030Clytia hemisphaericaexon
TCONS_00003902-exon-sc0000038-1575043694:520979..522030TCONS_00003902-exon-sc0000038-1575043694:520979..522030Clytia hemisphaericaexon
TCONS_00003902-exon-sc0000038-1491911889:522422..522565TCONS_00003902-exon-sc0000038-1491911889:522422..522565Clytia hemisphaericaexon
TCONS_00003902-exon-sc0000038-1510915933:522422..522565TCONS_00003902-exon-sc0000038-1510915933:522422..522565Clytia hemisphaericaexon
TCONS_00003902-exon-sc0000038-1575043694:522422..522565TCONS_00003902-exon-sc0000038-1575043694:522422..522565Clytia hemisphaericaexon
TCONS_00003902-exon-sc0000038-1491911889:522934..524649TCONS_00003902-exon-sc0000038-1491911889:522934..524649Clytia hemisphaericaexon
TCONS_00003902-exon-sc0000038-1510915933:522934..524649TCONS_00003902-exon-sc0000038-1510915933:522934..524649Clytia hemisphaericaexon
TCONS_00003902-exon-sc0000038-1575043694:522934..524649TCONS_00003902-exon-sc0000038-1575043694:522934..524649Clytia hemisphaericaexon
TCONS_00003902-exon-sc0000038-1491911889:526767..526856TCONS_00003902-exon-sc0000038-1491911889:526767..526856Clytia hemisphaericaexon
TCONS_00003902-exon-sc0000038-1510915933:526767..526856TCONS_00003902-exon-sc0000038-1510915933:526767..526856Clytia hemisphaericaexon
TCONS_00003902-exon-sc0000038-1575043694:526767..526856TCONS_00003902-exon-sc0000038-1575043694:526767..526856Clytia hemisphaericaexon
TCONS_00003902-exon-sc0000038-1491911889:527083..527202TCONS_00003902-exon-sc0000038-1491911889:527083..527202Clytia hemisphaericaexon
TCONS_00003902-exon-sc0000038-1510915933:527083..527202TCONS_00003902-exon-sc0000038-1510915933:527083..527202Clytia hemisphaericaexon
TCONS_00003902-exon-sc0000038-1575043694:527083..527202TCONS_00003902-exon-sc0000038-1575043694:527083..527202Clytia hemisphaericaexon
TCONS_00003902-exon-sc0000038-1491911889:528904..528996TCONS_00003902-exon-sc0000038-1491911889:528904..528996Clytia hemisphaericaexon
TCONS_00003902-exon-sc0000038-1510915933:528904..528996TCONS_00003902-exon-sc0000038-1510915933:528904..528996Clytia hemisphaericaexon
TCONS_00003902-exon-sc0000038-1575043694:528904..528996TCONS_00003902-exon-sc0000038-1575043694:528904..528996Clytia hemisphaericaexon
TCONS_00003902-exon-sc0000038-1491911889:529874..530008TCONS_00003902-exon-sc0000038-1491911889:529874..530008Clytia hemisphaericaexon
TCONS_00003902-exon-sc0000038-1510915933:529874..530008TCONS_00003902-exon-sc0000038-1510915933:529874..530008Clytia hemisphaericaexon
TCONS_00003902-exon-sc0000038-1575043694:529874..530008TCONS_00003902-exon-sc0000038-1575043694:529874..530008Clytia hemisphaericaexon
TCONS_00003902-exon-sc0000038-1491911889:530360..530445TCONS_00003902-exon-sc0000038-1491911889:530360..530445Clytia hemisphaericaexon
TCONS_00003902-exon-sc0000038-1510915933:530360..530445TCONS_00003902-exon-sc0000038-1510915933:530360..530445Clytia hemisphaericaexon
TCONS_00003902-exon-sc0000038-1575043694:530360..530445TCONS_00003902-exon-sc0000038-1575043694:530360..530445Clytia hemisphaericaexon
TCONS_00003902-exon-sc0000038-1491911889:532197..532304TCONS_00003902-exon-sc0000038-1491911889:532197..532304Clytia hemisphaericaexon
TCONS_00003902-exon-sc0000038-1510915933:532197..532304TCONS_00003902-exon-sc0000038-1510915933:532197..532304Clytia hemisphaericaexon
TCONS_00003902-exon-sc0000038-1575043694:532197..532304TCONS_00003902-exon-sc0000038-1575043694:532197..532304Clytia hemisphaericaexon
TCONS_00003902-exon-sc0000038-1491911889:534027..534642TCONS_00003902-exon-sc0000038-1491911889:534027..534642Clytia hemisphaericaexon
TCONS_00003902-exon-sc0000038-1510915933:534027..534642TCONS_00003902-exon-sc0000038-1510915933:534027..534642Clytia hemisphaericaexon
TCONS_00003902-exon-sc0000038-1575043694:534027..534642TCONS_00003902-exon-sc0000038-1575043694:534027..534642Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000038supercontigsc0000038:519762..534642 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
3.5217	0.937613	2.04074	0.200899	4.78414	0.166475	0.295899	0.16761	0.231729	0.713105	0.246928	2.07925	0.612544	1.88245	0.174183	0.517709	1.56638	0.861472	2.75154e-10	0.55007	0.538694	0.238848	0.845287	2.20555	0.102274	0.180131	1.16196e-06	0.684348	1.45229e-05	1.23304
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00003902 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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