TCONS_00003895 (transcript) - C. hemisphaerica

Overview
NameTCONS_00003895
Unique NameTCONS_00003895
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1484

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00003895 ID=TCONS_00003895|Name=TCONS_00003895|organism=Clytia hemisphaerica|type=transcript|length=1484bp
ttgatattgatttttttgccGGTACCGGTGCAGTCGTacattcaaaatgg
cggatcaAGTAGCAGAGGGAAGTGTGAGCAAAGAAGTtgaaaataaCACA
AAGGATGCAGAGATGCCCAAAGAAGAATCTACAGAAGAGCCAGCCTCAAA
GTTCACTTGTAATGGTGAAccaattaaattcaaaatggtttGGAACAAAT
CTAATTATGAAATGACAAAGCTGGGAAAATCAAATACTGTTGCTGATCTA
AGGGAGTATATTGCAGAATTAACTGGTATCCCAACAAATATGCAGAAAAT
CATGTTCAAAGGATTGGTAAAAGATGATGCAAAAACATTGGAAGAAATCA
AATTGACATCTGGTTCAAAAGTGATGGTGGTTGGATCCACTGTAAAAGAT
ATTGAAAAAGTTAAGACACCAACCACTCAAGAACTAAAGGCTCAAGCACA
ATCTGAAGctGCAGCAAGCAAAGAAGCGTTGTGCAAACAGAAGCAACACA
AAAAGGTACTTGATAAAGGAAAACCAGATGATGTGCCTGTCGGTGTCAAA
GGTCGAAAGGAGCCTTTACCGCAAGTCCCATTATCTGGAATGGTCAATAA
AACCGGAGGACGTGTTCGGTTAACCTTCAAACTAGAACTCGATCAACTGT
GGCTTGGGACAAAAGAGAGGACAGAAAAACTACCGATGTCATCCATTCGA
AATGTTGTATCCGAACCAATCGAAGGTCAAGAAGAATATCATATTTTAGC
GATTCAACTTGGACCAACAGAAGCATCTCGGTATTGGATTTACTGGTTCC
CAGCGCAATATGTTGATTCTGTCAAAGACACTATCCTTGGTAAATGGCAA
GTCTTTTAATAAAGCTTCAAAGCACGTATTGGCTGCAATCGACTAAAGAA
CAGAGCCTCGCTTCTACGGAGCTTGACGAATAGAGAGAGATGACATCTTA
AAGTTAgttcaataaaaaagaaaaacgtttaTATGGCATTCGCGTTCAAG
CAGAAAAAGATGAAAGCCATCATTGGATTTTTTGAATAATGACATCaatc
aaaacgttcgaaaacCTGGACTGGACTTTTATGAAAACTCGTGAAGAATG
TTTGTTGTTTATGCTGGATTTTACACAACTATTTTTATCATCTGCACCTG
TTTATTTATATAGTAAAAGTTGATACTTTGCAAAAgggaatttctttttt
cattaagTAGTATTTCTGAAACCGAAATCTGCATAAATGTAAAGAAGCAA
TCTTCATGGTTGCTTTTTATTTCTGTTCGCTAAATTTAAATTTCGTTCTA
ATTTTTTAGACTTCCTTGCATTCTAAATAGTTTTATTTTACTTAGAAGTT
GTCTTCAAAAGAATTAGGTTATAATTATTATCTTTTGTTAAAATAGTACA
ATTTTTGTTCATAGAGTTTTTGAAAtacaaatttttcttaaagCTATATG
ATGCTAAGGAAcgttcaaaataaataaaccaaGT
Run BLAST on NCBI

protein sequence of TCONS_00003895-protein

>TCONS_00003895-protein ID=TCONS_00003895-protein|Name=TCONS_00003895-protein|organism=Clytia hemisphaerica|type=polypeptide|length=270bp
MADQVAEGSVSKEVENNTKDAEMPKEESTEEPASKFTCNGEPIKFKMVWN
KSNYEMTKLGKSNTVADLREYIAELTGIPTNMQKIMFKGLVKDDAKTLEE
IKLTSGSKVMVVGSTVKDIEKVKTPTTQELKAQAQSEAAASKEALCKQKQ
HKKVLDKGKPDDVPVGVKGRKEPLPQVPLSGMVNKTGGRVRLTFKLELDQ
LWLGTKERTEKLPMSSIRNVVSEPIEGQEEYHILAIQLGPTEASRYWIYW
FPAQYVDSVKDTILGKWQVF
Run BLAST on NCBI

transcript from alignment at sc0000038:426464..440911+

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00003895 ID=TCONS_00003895|Name=TCONS_00003895|organism=Clytia hemisphaerica|type=transcript|length=14448bp|location=Sequence derived from alignment at sc0000038:426464..440911+ (Clytia hemisphaerica)
ttgatattgatttttttgccGGTACCGGTGCAGTCGTacattcaaaatgg
cggatcaAGTAGCAGAGGGAAGTGTGAGCAAAGAAGTtggtaagtttttt
ttcattctcatACAGTGTAGGGACTACAAAATGTTAGTGTTTTTTTGTGA
GATTTCTCTAGTTTAAATGTTTGTCTCATTTAAATCACTATAAAAGTGGA
CCTTAATATTAATTCCattactgtcaactgctctataCTTTTTGGTTGGA
TGGCAACCGCATGGCatggttcggttattatcagttagggttagggttgg
agctcgagagtcacaatataaggcagATGGCCTTCTTAGAGGCATTCGTA
TATACCCCTGAGTCCTGAGACTTAACTTTGGATCCCGTAGGgcgggatcc
ttgtaggggcaccacCACCGGCAGGGACTCCAGTTTTCAGATTGTGGCAG
AGCTGCTCCCGACGAAGATGAGCGTGCACACGAAGCAtgccacactagcg
tcccgccaaaatgcgtatcaaagattaatgctgcgaaagcgctattaTAT
Cttttacttgactcgcaagcaaaaaaatgtgctgcaaaacttctaaaggg
attcatgaaaaaataacccagtgCTTTTTaatcacgtgcgtttggtttgg
aaatgcgaaacacgaacgcgaactacccatgtctaaacttttcaatatat
ctccagaactaacagatttttaaaagcgggacaaaaatcagtttttttaa
gtttacaaaaaacgccacatagaagctctttcaaattcagtatgtgaata
gagcagtaaaaaatacaacttttctattttttcctcttttttccaaacgt
tctaggaatgaaaataaaagtataATGATTGAATGCTATCCACTGgtgca
gggctgcaaataaatatttttagtcaatcggacatcatatcagacagaaa
tgaaatcctgtcggtcaaacttaaaatcctgtcggtcatttcagtgtata
ttttttctaaaattatgcagtcttgaaagttacggagaaagcAAGTAGgt
aaaataaaagttaccttgGAACAGTTTGTTACTTTACAgtaacagagaaa
ttgattcgataaaagtgatcttcttagaaacacccttgaaagttataAAG
TAAGCAAATTggtatcaacttgctttcttcgtaactttcaagagcgtttc
taagttaacttttatcaagccattaaaagtgattttcgaaacaaagaagg
ttacaaagaaagcaagttgacgaAAGTAAttttagaaacacccttaaaag
ttacaaagaaagcgggtgataaaagtgatcttggaaacaaagaaagtaac
gacgaaagcaagttgataaaagttaacttgaAACACCCAAGGAAgcgagt
attaaaagaataggctaagtaagagacaggggtgtaagagatttattttc
aactctcaagttaatggtttattccTCTTTTTATTCGGACATCAtgcagt
taggaacatttggcgagttcctgtacgcgaccgcgatctaaaaaatcata
acaacactcattaaaaaatgacgttcgtgtcttttcgcaCTTTTTTTAGC
CTAGACGATGTAGCAAACATAGTAAAcataagcacactgtgcttttaatt
agctgtagtttttttttgcgtcggaaaatatttttcaaactttcagcaat
aattgaccaaactgttacaatgaaaattatccagcgcattttttatcttc
ttatcttcttaatATTCAATGAAGCattcaaagtttactgaatttaagca
cataagatattcttataattattgatattcacttaaacaccgttcgttgt
acgctgcggtggagtgaatgacgtaactcgcgcggtaacCAACTCGCTTt
atgttggaagatcatattgggcgttttggcgttaccaccctcaaaACTAG
CGGGTgcccctgtctttccgcaactctttccaccattttagatggccata
acaatagatccaaaagggcgccataatcttggaagataatttgttttgat
ctccagctttgggaagtagcaatgtttttggttgttttcaatggaaaatg
gtaagaaacttaagtttacaagtggcatttagtttttactggcttataga
atggcaggatcctggatggtttccctaactgtcaTGACccacacaaaaga
ttttcagtcagtcaaatggctttttcagtcggacattgaccgaAGCGTCA
GTGCGCTTATTGCAGCCCTGCTGATGattcgcggcactatcgtaaagcta
gaatcgcttcgtgTCTCtgcgcttgagaaaatgattgccAGATTAAAATT
TTTCACCCGCGCGGGAGCTCGCAGGTGTTCAGTGAGCATTCTTGGCTCAA
TCCTCaaaccgcgctaaaaatggtagactaagctgtgatagatcattttg
atggaagttgttggaatgtttacaaggctcttgacagaaaatcctttttt
tattgtcaatgatgacagtgtcgttattaattttgctagatctgacatat
tgatgtttgtaagtgcactttatagtatTGATTCcctgaagaatcatatt
ctggtttttcTGAGAGCTAGcctgattggagaattagagagcgcccgccg
cctaaccacctagcgcccaatgggattaacaagtaacgagtgtgtaactt
gctgcgcaagtgacgtcaaacgctcctttgttttgccactaatttgttct
tcttcattCCAGACACACGCAAGTGTCCCATTACAGTTTTTTCGTATTTT
GATTCAAAACCCTACTctgtgcgaaagagaaatcatgtattttcTAATAC
ACCgatcattaactcaaatcaaatgactttggaggtttggtgaaattgtg
gccgaattgccgtcccatgttttgttagatagtcccaagtaagagcagtt
gacggtagctgATCGATACTCATGATTTTTTTATGGTCTGATCAGTGCGG
GTCGAATTCTTCAGATCCTTGGCTAGagaaagctatacctgtttactttt
tccttgccagattcaacaagccatcaaccaacaaaattaacacagacatc
aaaaaattcacacAACCTTTCCACAGtagacacttctaaattatctgcca
ttatgaagatgttccaaaattaaccaatcgggtttacaATCGAAATTCCT
CTGGGAGTTAGCAAGTCGAGAAATGTAGAGTTGCGTAATAGGAAAATACT
TATTTTCGGGGGGTTAAACGtataaaagaaaatagaaattgtatgttttt
ttcttcattatatatttagGTTTCCATCatcaaaattctagaaatgctaA
TTTGTAGACCATAATTAGAAAATGTttatatatttcgcaaaataaacaaa
aagatattaCTTACTGTTTTTACCTCAACCTTTTAAACAGAGTCTTCTGT
GGGCGTGATATCAGGCGGAGAAAAGTGTCCTCGTCGTAAGATTCTTGGGT
CgtcttattgtttgttccttttgtcAAGTCTTTTGGTCCTATTGTTCATG
CTAAATCCACACACAATGTTGTCAATGTTTGGCagcatacctgaaaataa
aaacaaaaagatttatcaTTATTTATGCATGAATTACGCTACCTTATACG
TTATTACGAAAGCAAGTTTAGGCCGCCTGCCTAGAGAGTGCGggccctaa
tattttttctcttgcGGTCTTCAGTTTTCTTCGAAGGAAGAACTTGCCAA
AAAAAAACCCTAGACAAAAAGATGACTTTTgaggttgggaatggatcctg
caaaaagatgaagaaattttgactaggcgttttttttgcaaacctaaaaa
ctctaatttttttcttccctcaagctaaaaaggttacgggttttgggcaa
tcgaggcaaaaatcaACTAAAAGGCTATAGTGTTTTCCATAAATCTGAGA
ATCGCGATAGATCCTCACTGCTGATTACCCATCAATTATATCAAATAATT
GATATCTTACTTACCTTACCGGGTCGAGCGAGCTCGGCATCTGATGACTT
GATCTTTCCACCGTGTTCGATCTCTCATAAGCACCGGGAGGTCTTCTTTC
AAGCAGCCTAGATCTTGACAGAGTTGGTCAAGATACGTCTTTGCTGGTCT
ACCGCGTGTTTTGAAACCGTGATTTGGTTGCCAAAGGACAAGATCGCTAG
CTAGCTCATCTTTGCTCCTAAAACAATGTCCAGCAAACCTGAGACGTCTG
TCCTTCAATGTTTGGCTTATTGGTGGAAGATCTCCGTAGAGTAATCTNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNA
AAttcctttttaattttgctgatAGGTTAGATTTCCATATTTTGTCCAGT
TTGTTGAGGGCTGACCAGGCTTTTGCTAGTCTGATTTCCATATCTCGTTT
TGTAGAGGAAATGTTACTGCCAAGGTAGGTAAATTCTTGAACTGAATTCT
TGAACTTGAATTGATATCTAATCCATCAATTACTCCCAATTAttgattat
atcgattaactaagcCTGGATTATTTGGCAGTTCCAAGTTACACCCCCTC
TGTGTTGTGACTGTGGGTGGGTGGATGGATGGACGACATAAATGGATTTT
ACATAACAATTTACCTTTGAGAAACTTCAGGATTTCTGTTACATTAAAGA
TTTCTTAGGGAAAATTCCAGGATTTTCTGATACCTGACAAGAGTGTTCAA
TGCCCTTTTTCTTGGTATCCTATCGAAAACAAGAGTTGGGTCACGCAATA
ATCTCAACTGTAAAAACCAAGGTGGAAGGAAAGAAGTCATAAGCCCAATT
AAACACACAGAAGATATGGAACGCATTGAAACACAATCAAATGTTATTGA
GCACAAGCGAATCTTAATCAAACGCAATTGAATATCAATTGCAtggcatg
aaccccccccccagccTGCAGGGGGGGGCTTcaaccaaaatcttcctgaa
aaaggctgggggctgggggcttttttttcaatttcagggggtacctatga
tctctgggggtatctaacttttatgcagtaaggtctgggggcttgggaac
gatattttatcttgcttttatctaactatcattattctttttaattgtaa
aaatatacaatttttttcatttcttgacatatactcaagtcacagggggt
accNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNggggtacctactaacgtctgttgtt
tgggggtacctaaaattcagggggtacctattttcttagggggtacctaa
atccctggtccatgccatgaATTGAATCGGAAAACTGCGGTAAATTCGAC
TGAGATTTGATTACattcgacaatcaaatttcaatagcGCCTATATCAAT
gaatatgttccgttcgcgtcatAAAACATCCCCAAATCCAGTCGGTTGGT
CGGTAGCAAAtgttgtcggattttttatatttaataaATTCCGAAGAATC
CAGTCACCAAAATACAGAATCTCTTGTCACCCTGTTaaaatttgctaaaa
taaatctaGTGAAATGTGTTGACTTTAAAACTGGACCAAATTTTCGCACC
TCAGGGGTACTGGCTCTATCCCGTCAGTGAGTTTCAAGTTGATAATTTCA
ATGAGGGTGGATGGAAAAAACTCAAATGGGACTCAATGCGGgtgaagtaa
acaaaaacttgaagcAAATGGTAATGTAGAAAAGGGCTTAGCTATCAAAG
AAATCTTTCGACATTATTGCAGCTGGGCCGACTCGGGATTTATGTTTTGT
AGGTGAGTCGGTCGAGCAACACGAACAGAACATATTATTGATGATCGCCT
AGGTCGATTGCAGTCAATTTCGCTCAACTTGTACAATTATCAATTCCGTT
CTATTGAGACCATCTGGTTGGAAGGAAAAAATATGTTCAGCAGCATTTTT
CATTGTTGAAAAAAGCTTGTATACGTAAAATGAATGTATTTTGTTGATGC
GATGCTTTTATCCATCAATAGAGTGATTAACCAACCGAAGTCAGAAGTAT
GATATCATAGTTGAAGTAGTGAAAATTATTGTTCCATTCAATACTGACAG
TTTCATGTCTTATTCAAAAaatcctcagttgaaaataaaacttttttaaa
aactagagttccgttgctcttacaaaaaaataacattgcagggtcttcgt
caaaaattgacgtcattttagtccttctcgggtaacttaatgcatgtccc
aaaattgcattaatttttgcCCCCAGTTCCAGTTCATACATAAACCATaa
gaaattatatatttttgggagcgtaattggatgtagaatatcggattcgg
tgttacttaaattttttctcagtataatttattagagatattttaagaaa
acctgctaatgacgtcataattgatgacgtcataaatacaaaaagtttaa
tatctcaagaaatataaatcaaaactttatgaaatttggaccagtgatag
aGCACATTGAGATGAttcaaaaaaaagatcaaagtatttcccaaaattga
tgacgtcagcagaaattgcagaaattcgaattttcgcaataaaatgctga
catcagctaattttcaatttttttaaaaacatttctccttatcttgatga
gttctatcattggtccaaatttcataacatttCGAGCAtcagttcttgag
atattcaacttttttaaattatgacgtcatgaataatgacgtcataatta
ggttttcttaaaaaaactctaatTATGCTTAGAAGAAAATTAAGTAACAC
CAAATCCAACATTCTatatccaaatacgcttccaaaaatgtataatttgt
tatggtttaaCGGCTGGAGTAGGGCGAAAAGGGCGAAAACGAAAAGtaca
ttttgaataatttgggacatgcattaagttacccgagtctGATTGAGTTG
GTGTCGTAAACTTTTAAAGTGGACTTGTTCACAGTCgacattttgaaatc
aaaagctTGTCAGGGTTCAGAAACTTAGTGATTTCAAGTTTCTTAGCGAG
ACAAAGTGAGCATTTCAGTGACAAACGGTTGAACGGTGGGCACTGTCGGA
TGGTTTTCCATGTGATTATTGGTTTTTTCGCTTTAACCTCCaattgaatg
taaaaagatATTATAATGATCTATGTCTAACTATATACTAATATGACAAT
GAGGTCGTATTATTGAATCAAAAAGGCCACAGTAAGCTCTACTGTAAAGT
GGAGAGGGTTTAGTCTGGTTAGCCTGGGTAATTGGATAGCTGTAGattgt
ttatttcaaaaattattttcatttggtCATGATTTTTGCTTGTTCAGCAT
CAATATTCCTAGAGAATGaaataatccaatttttaatcatggtgtttttt
taatagtttttctgCTTTAATTTAATGTCATAAGTTTAACTTTCTACATT
GATAACTAAGTTAGCAGCTAGCATTTGATTAGTTACCTAAATAATTATGC
ATATAACTGAAAGCTATGAAACAAACTAACAACCCCACCTCAATTTGCTA
GTTACAAGTAAAGTATGAGACACTCTAAACACCCCTTTTAAGTTTTAGAT
TCTTTATGTCAATACCCCTAAATTATACCAATCCACAGCTGCACACCCTC
CTCCCCCACAATCTTGATCATGTAAATTAACTTGGAGAGGAATATCTCTC
CATCTCTCTCTtgttttgttgatttgattttgatttttacggCTTCcttt
ctttttgtagaaaataaCACAAAGGATGCAGAGATGCCCAAAGAAGAATC
TACAGAAGAGCCAGCCTCAAAGTTCACTTGTAATGGTGAAccaattaaat
tcaaaatggtttGGAACAAATCTAATTATGAAATGACAAAGCTGGGAAAA
TCAAATACTGTTGCTGATCTAAGGGAGTATATTGCAGAATTAACTGGTAA
CTCTTGTTGATTCTTATTACTACACTTCTGTTCTTTTTAGGACCATGTTC
AGACTTTACGGACCATGTTCAGACTTTACAGACTTTACGGTTTTGTATCA
TTCTGAAACAAAACAGTTTTGAAACTAAACAGCTCttaaacaagtgtgaa
cgtcaataTGATGATGTCAAACACGAAGACGTTACAAAGGAAAATAGATT
GAAAGGatttcgctccactattttcaaTGGAAAGGAACTGTTCCGTTTGG
TTGCTCCGAAATGTTCTGAAATCAGTATAAACACTTCCTATCCATAACAA
CGCCTGAACACGGTCTATGTTATCAAAAAAGGGTTCtgaagaattttcca
aaaaaaaactgtatttcatattgtacaTGGACATTTTGAATTTGGTTTAC
AGTCATTCTACTCTTTACAGTCAGGCTGgactttaaaaaatgttggtttg
ccgtcagccgacTGACTCTTCTCTAAACTTGTCACCCTAAAaacttttat
tgctttttctatgaagagaatgttttttcttcaaaaattacaaaatgtag
aCAAAAATTCCATGAATGACCGAAATAAAAAAGTCCAGCCTCATTCTAGT
GTTACCTTTGGAAATTAGTATCTTGaaggtaaattattttggtaGATTAA
TTCCAGTTTTTGTCTAATATTAATCCAACTCATATTTTATTCCTTTTACT
GCTTTCAGGTATCCCAACAAATATGCAGAAAATCATGTTCAAAGgtttaa
aaagcttttcattttaattatatcaatttcattttgcttttaatttaaaa
tatatttgcaatattttctattttctgctATTTTATCTTTTACGAAGTGG
CGTCATTTTTTTGAGCTCGCTATAAAGTAATTATTCTGATTTAATATACT
GTCTGCTACTCTTAAGCTTAGATTCACATCCGGCCCTAATACAATGTATT
TGTAGAtcaaattttgcttgaaaagttGTAGATTATTTGGTAAATTCTCT
CTCAAAAAGACAGGAGTTTTTTGCCATTACTAGTCAGGGAAACTTTACTG
GGTTATTTCTGTGGGGTAATTTGGGGatgttatgatatttttgagaattt
tgcaAAGTTATGGTAAAACTTACTCTCTTGGTAATATTCTTCAGGATTGG
TAAAAGATGATGCAAAAACATTGGAAGAAATCAAATTGACATCTGGTTCA
AAAGTGATGGTGGTTGGATCCACTGTAAAAGATATTGAAAAAGTTAAGAC
ACCAACCACTCAAGAACTAAAGGCTCAAGCACAATCTGAAGGTATCCTAT
TTTCATATTGTATGAGAATCTTAAAAAAGCTACCAAAAACATGTTTCTAT
GTTTTTGCTTGAGGCAATTATGTCAGGGATATGTTGGGGATATAGGATGA
AAATTCTAATGGGAATTATTGCAGCAAGTGTCTagaaattaaattctaaa
ataaagctgttttttcttttttaatttcagctGCAGCAAGCAAAGAAGCG
TTGTGCAAACAGAAGGttcttttttaataattacAACATAGAAAATACAC
gctattttttgtaagaatagtgtactttggatgagggtcaagtattttta
agaaattgccaaaattgagggttaaatattcttaacgtattcttactttt
tcagaattgacttttttacaaacattagaaatgatcaatttgagagtttt
gggcttttgaatgaacatttgaagctaaaattacatttctacCTCAAAGC
TTAAATTCAAATCTAACAAAGAAAGCATTTTTTTCtataaccaaatacaa
aatgactttattcttatcaaaccttgtgaaactcaccctattattcttac
gatttggccaattttcaccctgatattccatggtttcagcccacttttca
ggtgcccccattgagcatggtgcccccagcaatttaggtccccttgaaaa
attgctttgagttaggtacccctatNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNtattcttatagaagatattcttacaaaaaa
atcgTGTGGCTCTAAATGGCACATTTAAAAGACAAAGTTCACTCAGTACA
AAGCAGGAAACATCTGGTTTCATATCATTGTATTCACTCTAGGAAAACAT
TATTTTCCATAATTAGTTGAAAGCTAACCGATCTTTATCttcaaaattct
gcaaaattatGATGGACCAttccaaaaagtttttgttaCCCTCGTCGGAg
gacgtgcattttttaattttttctagcctcgggaataatttttcttatcc
agtggtggtcggaaattacTATGAAAATTCATGTATTTCTGCAAAATGCA
tcagaaattccactcttttttgcctttttttaattcagttgccttggaaa
ttcatacattttcttctctcaccttggaaatttcgaattttagtgaaaac
ttttgccctcggaaacCCTGTGTCGTcccctgtgtcgtccgccccctgtt
acagacaaattctggaatggcccattacaAAGGTTGAGGAAATGAGGCCT
CCACCTCAGTTTCAGGCAGATTGATTTGTCAACTAATCAATACTTCTTTA
TACTAGCAACACAAAAAGGTACTTGATAAAGGAAAACCAGATGATGTGCC
TGTCGGTGTCAAAGGTCGAAAGGTAATTCTTTTAATAGATTTATCTTAAG
GCGAaactaaaaaaatgtagtgtttccggaatgcgggtgaaggaaaaaag
ttctCATGCGGCCAGCTGAtgaaacgttttttttcttctatttttgacaa
cttaagatcattgaaatagaactttaaagataacttttatgtacaaacag
tatgaagtaagccctgaatactaatgtattaACTACTgacgaacaaaact
tgatttacaagcgggaatatcaAACAagcgacgtttgatagcttgaacgg
ttaacttgattttctttatgatgaaccatatcagatgaacccatagtctg
tggccgggtcagaaaaataatttttttcacccggccagGTTtctggaaac
actacatttttttatttttggctaATGTTCTGTAACTCATTTTTTGTAGT
TGTGTAGTCTTAGTCATTAATGTAAATCCATTCAACATGAAAGCTTATCT
TGTTAGAGtcgttttttttgcaaagaaatttaattttgttgGGAATGCAA
ACCCATCAAACTTATCTTTGCTACAAATAAGATTGATACATTCTTCAATT
CAGGAGCCTTTACCGCAAGTCCCATTATCTGGAATGGTCAATAAAACCGG
AGGACGTGTTCGGTTAACCTTCAAACTAGAACTCGATCAACTGTGGCTTG
GGACAAAAGGTGAATATAAAAATGtcgtttaaaaatctatctAGCATTTC
TTAACCACCTCGTACTAAATTAGAGAGGTTTTCTGTCTTTTTAGTTCAAC
AATACGAAGTAATTCTGTAAAAcaattctcaaaatttattgtgGCTTGGA
TCTGCTTGGATTAcgagatttaagattttaattttggctaAGTTTCGAGA
GATTCTCCTCCCATCACCAGGCTATATCACTATCGTATCACTTTCTTAGC
TATAACCTTcagttagtgtaaaacgcaggtcacaggtcacaggtcacggg
tcacaggtcagtgttgacaggtcagaTTCAAATACTgtgaaacacaaaaa
aaatgtttaaaaaaaagttgctaatgtcaaaaataattccaaaggtattt
tattgatctagaacttTACTTTTAGAGAGGACAGAAAAACTACCGATGTC
ATCCATTCGAAATGTTGTATCCGAACCAATCGAAGGTCAAGAAGAATATC
ATATTTTAGTGAGatacatttcatttttcattttttccgttTCTAAATTG
ATCATAAGGGGAATAGGTCCTAGTTTTCCACTGTTAGATATCGCAAATGT
CTAACTTATTGGGCTTTAAGAAATTTTGGACGCCATTCAAACCTAGCTAA
CACAAACCCAAATTCTGGCATCAGTGCAAGACACAATGGGTTTGACGGAT
GACAAGACTAATTGTCAATAATACGGTTTCCAGGCAAGTTGATTTGAGAC
TGTCAGTTGTTTTGAAGAATGAGTTTCAAATTTGCCGCAGGCACGATGAT
GAAAAGAAGTTAGGTGTTTGTTGGTCTAAGGTAGAGAACTGGTGGGGATA
TAGGGGATTAAAGTGCTAGAATATTGAATACCTAAAGACACCTTAcctaa
agaaaatataaaaagctTATTAAAACTGTATTTTTCAATGAGTTATTCCG
ACCTTCCTTTAGTCATATCTCCAAAGAAGGATGACGTACTTAGATAGGGG
TTGTCGGTATTAGATAGGGGCTGTCGGCATTAGTGCGTAAATTTCACCCG
ACCATTTTAAAGGCGATTCAACTTGGACCAACAGAAGCATCTCGGTATTG
GATTTACTGGTTCCCAGCGCAATATGTTGATTCTGTCAAAGACACTATCC
TTGGTAAATGGCAAGTCTTTTAATAAAGCTTCAAAGCACGTATTGGCTGC
AATCGACTAAAGAACAGAGCCTCGCTTCTACGGAGCTTGACGAATAGAGA
GAGATGACATCTTAAAGTTAgttcaataaaaaagaaaaacgtttaTATGG
CATTCGCGTTCAAGCAGAAAAAGATGAAAGCCATCATTGGATTTTTTGAA
TAATGACATCaatcaaaacgttcgaaaacCTGGACTGGACTTTTATGAAA
ACTCGTGAAGAATGTTTGTTGTTTATGCTGGATTTTACACAACTATTTTT
ATCATCTGCACCTGTTTATTTATATAGTAAAAGTTGATACTTTGCAAAAg
ggaatttcttttttcattaagTAGTATTTCTGAAACCGAAATCTGCATAA
ATGTAAAGAAGCAATCTTCATGGTTGCTTTTTATTTCTGTTCGCTAAATT
TAAATTTCGTTCTAATTTTTTAGACTTCCTTGCATTCTAAATAGTTTTAT
TTTACTTAGAAGTTGTCTTCAAAAGAATTAGGTTATAATTATTATCTTTT
GTTAAAATAGTACAATTTTTGTTCATAGAGTTTTTGAAAtacaaattttt
cttaaagCTATATGATGCTAAGGAAcgttcaaaataaataaaccaaGT

Coding sequence (CDS) from alignment at sc0000038:426464..440911+

>TCONS_00003895 ID=TCONS_00003895|Name=TCONS_00003895|organism=Clytia hemisphaerica|type=CDS|length=7317bp|location=Sequence derived from alignment at sc0000038:426464..440911+ (Clytia hemisphaerica)
atggcggatcaAGTAGCAGAGGGAAGTGTGAGCAAAGAAGTtgaaaataa
CACAAAGGATGCAGAGATGCCCAAAGAAGAATCTACAGAAGAGCCAGCCT
CAAAGTTCACTTGTAATGGTGAAccaattaaattcaaaatggtttGGAAC
AAATCTAATTATGAAATGACAAAGCTGGGAAAATCAAATACTGTTGCTGA
TCTAAGGGAGTATATTGCAGAATTAACTGGTATCCCAACAAATATGCAGA
AAATCATGTTCAAAGGATTGGTAAAAGATGATGCAAAAACATTGGAAGAA
ATCAAATTGACATCTGGTTCAAAAGTGATGGTGGTTGGATCCACTGTAAA
AGATATTGAAAAAGTTAAGACACCAACCACTCAAGAACTAAAGGCTCAAG
CACAATCTGAAGctGCAGCAAGCAAAGAAGCGTTGTGCAAACAGAAGCAA
CACAAAAAGGTACTTGATAAAGGAAAACCAGATGATGTGCCTGTCGGTGT
CAAAGGTCGAAAGGAGCCTTTACCGCAAGTCCCATTATCTGGAATGGTCA
ATAAAACCGGAGGACGTGTTCGGTTAACCTTCAAACTAGAACTCGATCAA
CTGTGGCTTGGGACAAAAGAGAGGACAGAAAAACTACCGATGTCATCCAT
TCGAAATGTTGTATCCGAACCAATCGAAGGTCAAGAAGAATATCATATTT
TAGCGATTCAACTTGGACCAACAGAAGCATCTCGGTATTGGATTTACTGG
TTCCCAGCGCAATATGTTGATTCTGTCAAAGACACTATCCTTGGTAAATG
GCAAGTCTTTTAAatggcggatcaAGTAGCAGAGGGAAGTGTGAGCAAAG
AAGTtgaaaataaCACAAAGGATGCAGAGATGCCCAAAGAAGAATCTACA
GAAGAGCCAGCCTCAAAGTTCACTTGTAATGGTGAAccaattaaattcaa
aatggtttGGAACAAATCTAATTATGAAATGACAAAGCTGGGAAAATCAA
ATACTGTTGCTGATCTAAGGGAGTATATTGCAGAATTAACTGGTATCCCA
ACAAATATGCAGAAAATCATGTTCAAAGGATTGGTAAAAGATGATGCAAA
AACATTGGAAGAAATCAAATTGACATCTGGTTCAAAAGTGATGGTGGTTG
GATCCACTGTAAAAGATATTGAAAAAGTTAAGACACCAACCACTCAAGAA
CTAAAGGCTCAAGCACAATCTGAAGctGCAGCAAGCAAAGAAGCGTTGTG
CAAACAGAAGCAACACAAAAAGGTACTTGATAAAGGAAAACCAGATGATG
TGCCTGTCGGTGTCAAAGGTCGAAAGGAGCCTTTACCGCAAGTCCCATTA
TCTGGAATGGTCAATAAAACCGGAGGACGTGTTCGGTTAACCTTCAAACT
AGAACTCGATCAACTGTGGCTTGGGACAAAAGAGAGGACAGAAAAACTAC
CGATGTCATCCATTCGAAATGTTGTATCCGAACCAATCGAAGGTCAAGAA
GAATATCATATTTTAGCGATTCAACTTGGACCAACAGAAGCATCTCGGTA
TTGGATTTACTGGTTCCCAGCGCAATATGTTGATTCTGTCAAAGACACTA
TCCTTGGTAAATGGCAAGTCTTTTAAatggcggatcaAGTAGCAGAGGGA
AGTGTGAGCAAAGAAGTtgaaaataaCACAAAGGATGCAGAGATGCCCAA
AGAAGAATCTACAGAAGAGCCAGCCTCAAAGTTCACTTGTAATGGTGAAc
caattaaattcaaaatggtttGGAACAAATCTAATTATGAAATGACAAAG
CTGGGAAAATCAAATACTGTTGCTGATCTAAGGGAGTATATTGCAGAATT
AACTGGTATCCCAACAAATATGCAGAAAATCATGTTCAAAGGATTGGTAA
AAGATGATGCAAAAACATTGGAAGAAATCAAATTGACATCTGGTTCAAAA
GTGATGGTGGTTGGATCCACTGTAAAAGATATTGAAAAAGTTAAGACACC
AACCACTCAAGAACTAAAGGCTCAAGCACAATCTGAAGctGCAGCAAGCA
AAGAAGCGTTGTGCAAACAGAAGCAACACAAAAAGGTACTTGATAAAGGA
AAACCAGATGATGTGCCTGTCGGTGTCAAAGGTCGAAAGGAGCCTTTACC
GCAAGTCCCATTATCTGGAATGGTCAATAAAACCGGAGGACGTGTTCGGT
TAACCTTCAAACTAGAACTCGATCAACTGTGGCTTGGGACAAAAGAGAGG
ACAGAAAAACTACCGATGTCATCCATTCGAAATGTTGTATCCGAACCAAT
CGAAGGTCAAGAAGAATATCATATTTTAGCGATTCAACTTGGACCAACAG
AAGCATCTCGGTATTGGATTTACTGGTTCCCAGCGCAATATGTTGATTCT
GTCAAAGACACTATCCTTGGTAAATGGCAAGTCTTTTAAatggcggatca
AGTAGCAGAGGGAAGTGTGAGCAAAGAAGTtgaaaataaCACAAAGGATG
CAGAGATGCCCAAAGAAGAATCTACAGAAGAGCCAGCCTCAAAGTTCACT
TGTAATGGTGAAccaattaaattcaaaatggtttGGAACAAATCTAATTA
TGAAATGACAAAGCTGGGAAAATCAAATACTGTTGCTGATCTAAGGGAGT
ATATTGCAGAATTAACTGGTATCCCAACAAATATGCAGAAAATCATGTTC
AAAGGATTGGTAAAAGATGATGCAAAAACATTGGAAGAAATCAAATTGAC
ATCTGGTTCAAAAGTGATGGTGGTTGGATCCACTGTAAAAGATATTGAAA
AAGTTAAGACACCAACCACTCAAGAACTAAAGGCTCAAGCACAATCTGAA
GctGCAGCAAGCAAAGAAGCGTTGTGCAAACAGAAGCAACACAAAAAGGT
ACTTGATAAAGGAAAACCAGATGATGTGCCTGTCGGTGTCAAAGGTCGAA
AGGAGCCTTTACCGCAAGTCCCATTATCTGGAATGGTCAATAAAACCGGA
GGACGTGTTCGGTTAACCTTCAAACTAGAACTCGATCAACTGTGGCTTGG
GACAAAAGAGAGGACAGAAAAACTACCGATGTCATCCATTCGAAATGTTG
TATCCGAACCAATCGAAGGTCAAGAAGAATATCATATTTTAGCGATTCAA
CTTGGACCAACAGAAGCATCTCGGTATTGGATTTACTGGTTCCCAGCGCA
ATATGTTGATTCTGTCAAAGACACTATCCTTGGTAAATGGCAAGTCTTTT
AAatggcggatcaAGTAGCAGAGGGAAGTGTGAGCAAAGAAGTtgaaaat
aaCACAAAGGATGCAGAGATGCCCAAAGAAGAATCTACAGAAGAGCCAGC
CTCAAAGTTCACTTGTAATGGTGAAccaattaaattcaaaatggtttGGA
ACAAATCTAATTATGAAATGACAAAGCTGGGAAAATCAAATACTGTTGCT
GATCTAAGGGAGTATATTGCAGAATTAACTGGTATCCCAACAAATATGCA
GAAAATCATGTTCAAAGGATTGGTAAAAGATGATGCAAAAACATTGGAAG
AAATCAAATTGACATCTGGTTCAAAAGTGATGGTGGTTGGATCCACTGTA
AAAGATATTGAAAAAGTTAAGACACCAACCACTCAAGAACTAAAGGCTCA
AGCACAATCTGAAGctGCAGCAAGCAAAGAAGCGTTGTGCAAACAGAAGC
AACACAAAAAGGTACTTGATAAAGGAAAACCAGATGATGTGCCTGTCGGT
GTCAAAGGTCGAAAGGAGCCTTTACCGCAAGTCCCATTATCTGGAATGGT
CAATAAAACCGGAGGACGTGTTCGGTTAACCTTCAAACTAGAACTCGATC
AACTGTGGCTTGGGACAAAAGAGAGGACAGAAAAACTACCGATGTCATCC
ATTCGAAATGTTGTATCCGAACCAATCGAAGGTCAAGAAGAATATCATAT
TTTAGCGATTCAACTTGGACCAACAGAAGCATCTCGGTATTGGATTTACT
GGTTCCCAGCGCAATATGTTGATTCTGTCAAAGACACTATCCTTGGTAAA
TGGCAAGTCTTTTAAatggcggatcaAGTAGCAGAGGGAAGTGTGAGCAA
AGAAGTtgaaaataaCACAAAGGATGCAGAGATGCCCAAAGAAGAATCTA
CAGAAGAGCCAGCCTCAAAGTTCACTTGTAATGGTGAAccaattaaattc
aaaatggtttGGAACAAATCTAATTATGAAATGACAAAGCTGGGAAAATC
AAATACTGTTGCTGATCTAAGGGAGTATATTGCAGAATTAACTGGTATCC
CAACAAATATGCAGAAAATCATGTTCAAAGGATTGGTAAAAGATGATGCA
AAAACATTGGAAGAAATCAAATTGACATCTGGTTCAAAAGTGATGGTGGT
TGGATCCACTGTAAAAGATATTGAAAAAGTTAAGACACCAACCACTCAAG
AACTAAAGGCTCAAGCACAATCTGAAGctGCAGCAAGCAAAGAAGCGTTG
TGCAAACAGAAGCAACACAAAAAGGTACTTGATAAAGGAAAACCAGATGA
TGTGCCTGTCGGTGTCAAAGGTCGAAAGGAGCCTTTACCGCAAGTCCCAT
TATCTGGAATGGTCAATAAAACCGGAGGACGTGTTCGGTTAACCTTCAAA
CTAGAACTCGATCAACTGTGGCTTGGGACAAAAGAGAGGACAGAAAAACT
ACCGATGTCATCCATTCGAAATGTTGTATCCGAACCAATCGAAGGTCAAG
AAGAATATCATATTTTAGCGATTCAACTTGGACCAACAGAAGCATCTCGG
TATTGGATTTACTGGTTCCCAGCGCAATATGTTGATTCTGTCAAAGACAC
TATCCTTGGTAAATGGCAAGTCTTTTAAatggcggatcaAGTAGCAGAGG
GAAGTGTGAGCAAAGAAGTtgaaaataaCACAAAGGATGCAGAGATGCCC
AAAGAAGAATCTACAGAAGAGCCAGCCTCAAAGTTCACTTGTAATGGTGA
AccaattaaattcaaaatggtttGGAACAAATCTAATTATGAAATGACAA
AGCTGGGAAAATCAAATACTGTTGCTGATCTAAGGGAGTATATTGCAGAA
TTAACTGGTATCCCAACAAATATGCAGAAAATCATGTTCAAAGGATTGGT
AAAAGATGATGCAAAAACATTGGAAGAAATCAAATTGACATCTGGTTCAA
AAGTGATGGTGGTTGGATCCACTGTAAAAGATATTGAAAAAGTTAAGACA
CCAACCACTCAAGAACTAAAGGCTCAAGCACAATCTGAAGctGCAGCAAG
CAAAGAAGCGTTGTGCAAACAGAAGCAACACAAAAAGGTACTTGATAAAG
GAAAACCAGATGATGTGCCTGTCGGTGTCAAAGGTCGAAAGGAGCCTTTA
CCGCAAGTCCCATTATCTGGAATGGTCAATAAAACCGGAGGACGTGTTCG
GTTAACCTTCAAACTAGAACTCGATCAACTGTGGCTTGGGACAAAAGAGA
GGACAGAAAAACTACCGATGTCATCCATTCGAAATGTTGTATCCGAACCA
ATCGAAGGTCAAGAAGAATATCATATTTTAGCGATTCAACTTGGACCAAC
AGAAGCATCTCGGTATTGGATTTACTGGTTCCCAGCGCAATATGTTGATT
CTGTCAAAGACACTATCCTTGGTAAATGGCAAGTCTTTTAAatggcggat
caAGTAGCAGAGGGAAGTGTGAGCAAAGAAGTtgaaaataaCACAAAGGA
TGCAGAGATGCCCAAAGAAGAATCTACAGAAGAGCCAGCCTCAAAGTTCA
CTTGTAATGGTGAAccaattaaattcaaaatggtttGGAACAAATCTAAT
TATGAAATGACAAAGCTGGGAAAATCAAATACTGTTGCTGATCTAAGGGA
GTATATTGCAGAATTAACTGGTATCCCAACAAATATGCAGAAAATCATGT
TCAAAGGATTGGTAAAAGATGATGCAAAAACATTGGAAGAAATCAAATTG
ACATCTGGTTCAAAAGTGATGGTGGTTGGATCCACTGTAAAAGATATTGA
AAAAGTTAAGACACCAACCACTCAAGAACTAAAGGCTCAAGCACAATCTG
AAGctGCAGCAAGCAAAGAAGCGTTGTGCAAACAGAAGCAACACAAAAAG
GTACTTGATAAAGGAAAACCAGATGATGTGCCTGTCGGTGTCAAAGGTCG
AAAGGAGCCTTTACCGCAAGTCCCATTATCTGGAATGGTCAATAAAACCG
GAGGACGTGTTCGGTTAACCTTCAAACTAGAACTCGATCAACTGTGGCTT
GGGACAAAAGAGAGGACAGAAAAACTACCGATGTCATCCATTCGAAATGT
TGTATCCGAACCAATCGAAGGTCAAGAAGAATATCATATTTTAGCGATTC
AACTTGGACCAACAGAAGCATCTCGGTATTGGATTTACTGGTTCCCAGCG
CAATATGTTGATTCTGTCAAAGACACTATCCTTGGTAAATGGCAAGTCTT
TTAAatggcggatcaAGTAGCAGAGGGAAGTGTGAGCAAAGAAGTtgaaa
ataaCACAAAGGATGCAGAGATGCCCAAAGAAGAATCTACAGAAGAGCCA
GCCTCAAAGTTCACTTGTAATGGTGAAccaattaaattcaaaatggtttG
GAACAAATCTAATTATGAAATGACAAAGCTGGGAAAATCAAATACTGTTG
CTGATCTAAGGGAGTATATTGCAGAATTAACTGGTATCCCAACAAATATG
CAGAAAATCATGTTCAAAGGATTGGTAAAAGATGATGCAAAAACATTGGA
AGAAATCAAATTGACATCTGGTTCAAAAGTGATGGTGGTTGGATCCACTG
TAAAAGATATTGAAAAAGTTAAGACACCAACCACTCAAGAACTAAAGGCT
CAAGCACAATCTGAAGctGCAGCAAGCAAAGAAGCGTTGTGCAAACAGAA
GCAACACAAAAAGGTACTTGATAAAGGAAAACCAGATGATGTGCCTGTCG
GTGTCAAAGGTCGAAAGGAGCCTTTACCGCAAGTCCCATTATCTGGAATG
GTCAATAAAACCGGAGGACGTGTTCGGTTAACCTTCAAACTAGAACTCGA
TCAACTGTGGCTTGGGACAAAAGAGAGGACAGAAAAACTACCGATGTCAT
CCATTCGAAATGTTGTATCCGAACCAATCGAAGGTCAAGAAGAATATCAT
ATTTTAGCGATTCAACTTGGACCAACAGAAGCATCTCGGTATTGGATTTA
CTGGTTCCCAGCGCAATATGTTGATTCTGTCAAAGACACTATCCTTGGTA
AATGGCAAGTCTTTTAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_002183XLOC_002183Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00003895-exon-sc0000038-1491911889:426464..426552TCONS_00003895-exon-sc0000038-1491911889:426464..426552Clytia hemisphaericaexon
TCONS_00003895-exon-sc0000038-1510915933:426464..426552TCONS_00003895-exon-sc0000038-1510915933:426464..426552Clytia hemisphaericaexon
TCONS_00003895-exon-sc0000038-1575043694:426464..426552TCONS_00003895-exon-sc0000038-1575043694:426464..426552Clytia hemisphaericaexon
TCONS_00003895-exon-sc0000038-1491911889:435024..435209TCONS_00003895-exon-sc0000038-1491911889:435024..435209Clytia hemisphaericaexon
TCONS_00003895-exon-sc0000038-1510915933:435024..435209TCONS_00003895-exon-sc0000038-1510915933:435024..435209Clytia hemisphaericaexon
TCONS_00003895-exon-sc0000038-1575043694:435024..435209TCONS_00003895-exon-sc0000038-1575043694:435024..435209Clytia hemisphaericaexon
TCONS_00003895-exon-sc0000038-1491911889:435922..435957TCONS_00003895-exon-sc0000038-1491911889:435922..435957Clytia hemisphaericaexon
TCONS_00003895-exon-sc0000038-1510915933:435922..435957TCONS_00003895-exon-sc0000038-1510915933:435922..435957Clytia hemisphaericaexon
TCONS_00003895-exon-sc0000038-1575043694:435922..435957TCONS_00003895-exon-sc0000038-1575043694:435922..435957Clytia hemisphaericaexon
TCONS_00003895-exon-sc0000038-1491911889:436358..436504TCONS_00003895-exon-sc0000038-1491911889:436358..436504Clytia hemisphaericaexon
TCONS_00003895-exon-sc0000038-1510915933:436358..436504TCONS_00003895-exon-sc0000038-1510915933:436358..436504Clytia hemisphaericaexon
TCONS_00003895-exon-sc0000038-1575043694:436358..436504TCONS_00003895-exon-sc0000038-1575043694:436358..436504Clytia hemisphaericaexon
TCONS_00003895-exon-sc0000038-1491911889:436694..436728TCONS_00003895-exon-sc0000038-1491911889:436694..436728Clytia hemisphaericaexon
TCONS_00003895-exon-sc0000038-1510915933:436694..436728TCONS_00003895-exon-sc0000038-1510915933:436694..436728Clytia hemisphaericaexon
TCONS_00003895-exon-sc0000038-1575043694:436694..436728TCONS_00003895-exon-sc0000038-1575043694:436694..436728Clytia hemisphaericaexon
TCONS_00003895-exon-sc0000038-1491911889:438370..438435TCONS_00003895-exon-sc0000038-1491911889:438370..438435Clytia hemisphaericaexon
TCONS_00003895-exon-sc0000038-1510915933:438370..438435TCONS_00003895-exon-sc0000038-1510915933:438370..438435Clytia hemisphaericaexon
TCONS_00003895-exon-sc0000038-1575043694:438370..438435TCONS_00003895-exon-sc0000038-1575043694:438370..438435Clytia hemisphaericaexon
TCONS_00003895-exon-sc0000038-1491911889:439017..439122TCONS_00003895-exon-sc0000038-1491911889:439017..439122Clytia hemisphaericaexon
TCONS_00003895-exon-sc0000038-1510915933:439017..439122TCONS_00003895-exon-sc0000038-1510915933:439017..439122Clytia hemisphaericaexon
TCONS_00003895-exon-sc0000038-1575043694:439017..439122TCONS_00003895-exon-sc0000038-1575043694:439017..439122Clytia hemisphaericaexon
TCONS_00003895-exon-sc0000038-1491911889:439539..439621TCONS_00003895-exon-sc0000038-1491911889:439539..439621Clytia hemisphaericaexon
TCONS_00003895-exon-sc0000038-1510915933:439539..439621TCONS_00003895-exon-sc0000038-1510915933:439539..439621Clytia hemisphaericaexon
TCONS_00003895-exon-sc0000038-1575043694:439539..439621TCONS_00003895-exon-sc0000038-1575043694:439539..439621Clytia hemisphaericaexon
TCONS_00003895-exon-sc0000038-1491911889:440176..440911TCONS_00003895-exon-sc0000038-1491911889:440176..440911Clytia hemisphaericaexon
TCONS_00003895-exon-sc0000038-1510915933:440176..440911TCONS_00003895-exon-sc0000038-1510915933:440176..440911Clytia hemisphaericaexon
TCONS_00003895-exon-sc0000038-1575043694:440176..440911TCONS_00003895-exon-sc0000038-1575043694:440176..440911Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00003895-proteinTCONS_00003895-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000038supercontigsc0000038:426464..440911 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
62.0791	59.3972	34.3412	31.6556	37.4494	28.7035	30.8375	32.1518	38.1736	31.5131	27.7683	26.4077	24.5019	24.6575	27.698	26.4347	32.44	31.5372	15.2038	18.4478	30.5892	30.5887	60.4588	55.807	41.0485	43.1139	22.7401	19.0567	31.9653	32.8508
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR000626Ubiquitin_dom
IPR029071Ubiquitin-rel_dom
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding
Blast
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BLAST of TCONS_00003895 vs. Swiss-Prot (Human)
Match: UBFD1 (Ubiquitin domain-containing protein UBFD1 OS=Homo sapiens GN=UBFD1 PE=1 SV=2)

HSP 1 Score: 281.182 bits (718), Expect = 4.409e-90
Identity = 140/230 (60.87%), Postives = 179/230 (77.83%), Query Frame = 2 
Query:  167 EPIKFKMVWNKSNYEMTKLGKSNTVADLREYIAELTGIPTNMQKIMFKGLVKDDAKTLEEIKLTSGSKVMVVGSTVKDIEKVKTPTTXXXXXXXXXXXXXXXXXXCKQKQHKKVLDKGKPDDVPVGVKGRKEPLPQVPLSGMVNKTGGRVRLTFKLELDQLWLGTKERTEKLPMSSIRNVVSEPIEGQEEYHILAIQLGPTEASRYWIYWFPAQYVDSVKDTILGKWQVF 856
            E +  K++WNK+ +++ K    +T ++L++ I  +TG+P  MQK+M+KGLV +D KTL EIK+TSG+K+MVVGST+ D+  V TP  ++   Q        KE LC+QKQH+KVLDKGKP+DV   VKG +E LP VPLSGM NK+GG+VRLTFKLE DQLW+GTKERTEKLPM SI+NVVSEPIEG E+YH++A QLGPTEAS YW+YW P QYVD++KDT+LGKWQ F
Sbjct:   84 ELVDLKIIWNKTKHDV-KFPLDSTGSELKQKIHSITGLPPAMQKVMYKGLVPED-KTLREIKVTSGAKIMVVGSTINDVLAVNTP--KDAAQQDAKAEENKKEPLCRQKQHRKVLDKGKPEDVMPSVKGAQERLPTVPLSGMYNKSGGKVRLTFKLEQDQLWIGTKERTEKLPMGSIKNVVSEPIEGHEDYHMMAFQLGPTEASYYWVYWVPTQYVDAIKDTVLGKWQYF 309
The following BLAST results are available for this feature:
BLAST of TCONS_00003895 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
UBFD14.409e-9060.87Ubiquitin domain-containing protein UBFD1 OS=Homo ... [more]
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