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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00003894 ID=TCONS_00003894|Name=TCONS_00003894|organism=Clytia hemisphaerica|type=transcript|length=1895bp CAGTACCTGATTTTCAAGTGAATAGAATGTGCACCATGTGTTTTTTGGTG TGGAAATACTATTGGAATGTTGGAATCGAGTGAAGACGTTTTGGTTTGAA GTTAACAATGTAAAATgggttttcaagaaaataatttgaccCCGTTGTTG AGgataatgatttttcgaagtatctaaccctatcctactttattagtaaa gatcCTGGTTAaaggatatcgtattttttacttgaaaagacactttaccc cctggatatctgctcccttgtagatatttaaccccttggatatccacttt tgaacaaaaatcgttaaccccctgatTATACGATATCCTCAACAAgaggg ggcacggactatttctggaaaagcccaatatgaCATGACTACTGGACCTG GTAGCTAAATCAAATAATTGCAATGCTATTACAAACGTAAAAGTATTTTC CAAATGAAAAATGAGTGACGATTTCATCACAGCATACTATATTTAAAGCA TTGATGGCATATACAAAATGATTATCTGACGACTTGACCAACGTCTATTA TCTTTCAACTTGTGTTAGAAGATATGATGAGAAAAACATACTTTCCAAAT CTATTGTGTGTCCGGAAAATTGATCACAATGAACTGcataaaagttgaaa atgatgGATTTATCCAATTTTCGCATAATTGACTATTCAGAGAGCTATTG GATTTGTGATGTTGAAACCGTTGAAATCTGTTGAAATCGAAGATACTCAA TATAGAAGGATTGCACAAACTCTGGAAAAgagttgacaaaaaaaaaacaa taaaaaatgaagttctacCCAGTCATAGCCGCCATTTTGGTATTATTTTC ATCATCAAGTTATGGCCAATCCACATCAAGCATCGAGCCATCGTCAACTG CTTCACCAGCGGAAGCCTCTCAAAGTCAGTCTGTTACCCCTTCAGTATCC ACCTCGGTCAGTGAGTCAGTAGGCGGGAGCGAAGCTACCTCCTCAATGTC AATGTCAGAATCAATGTCACCGTCTCAATCAGTTGATGGAAGTAGCCAAT CAGTTGATGGAGGATCTGTATCTCAATCCGCTTCTGCTTCAAATTCACAA GATATGCAATCATCCTCCAGTCAAGCTGGTGCGATGGCGTCGAGCAGTAT GTCTGTATCCGCATCAGCCAGTGCAGGTGGTGCAGAAGAATCTAGCAGTG TCTCTGCTTCGCAATCCCACATGGAGAGTTCAGCAACAGTAAGCGCTTCC ATCGATCCAACACAATCATCAAATTCTATTGATGTTGTTCAAACTTCTGC TGTGGCTGAAGGAACTTTTACCAAATGGACAATGGACTGTGAAAACAAAT GTTGTGATCACGCCGAAGACGGTGGATGGAAATCCTCTGCAGATACCATG AAATTGAACCTTACTCGCACATGCGCAGTATCCAAATGCACACCTGATAA ATACAACTCTACACTACAATACGAAGAAACTTGTAAAGAAGCCTGCGATG AAACATGCAACAGTGCAGcGTTATTGAAGATCTCTTCGATGTCACTGATC ATCTTATCATTCGCCATGTTCAAGAATATTCTCATGTAAAAAGAGCACCA AATGTAAATAAAATGTCACGAAATATACGTAACTGGTAAAAAGATATTCT TTTGGGTGATGGTGGAACGTAATTAAACTGTGTGGTGGAGGCTAATTTGG AGACTGTGTGCCCCATGCGTTTCATGTGATAATGTCGTGTAAAAGACGTA AAATCATCTTACGAGAATGATATGGCAAAACTGCGTCTGCGTCTAATCTT AATAAGTTTACGGTGGTAAGAACTCTGGAATAGTTCCGTCGAAAAAGATT AATTATGGAATGAAGGTACgacgaaaaaagattttaaatagtttt Run BLAST on NCBI protein sequence of TCONS_00003894-protein >TCONS_00003894-protein ID=TCONS_00003894-protein|Name=TCONS_00003894-protein|organism=Clytia hemisphaerica|type=polypeptide|length=260bp
MKFYPVIAAILVLFSSSSYGQSTSSIEPSSTASPAEASQSQSVTPSVSTS VSESVGGSEATSSMSMSESMSPSQSVDGSSQSVDGGSVSQSASASNSQDM QSSSSQAGAMASSSMSVSASASAGGAEESSSVSASQSHMESSATVSASID PTQSSNSIDVVQTSAVAEGTFTKWTMDCENKCCDHAEDGGWKSSADTMKL NLTRTCAVSKCTPDKYNSTLQYEETCKEACDETCNSAALLKISSMSLIIL SFAMFKNILM Run BLAST on NCBI transcript from alignment at sc0000038:394417..416456+ Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00003894 ID=TCONS_00003894|Name=TCONS_00003894|organism=Clytia hemisphaerica|type=transcript|length=22040bp|location=Sequence derived from alignment at sc0000038:394417..416456+ (Clytia hemisphaerica) CAGTACCTGATTTTCAAGTGAATAGAATGTGCACCATGTGTTTTTTGGTG
TGGAAATACTATTGGAATGTTGGAATCGAGTGAAGACGTTTTGGTTTGAA
GTTAACAATGTAAAATgggttttcaagaaaataatttgaccCCGTTGTTG
AGgataatgatttttcgaagtatctaaccctatcctactttattagtaaa
gatcCTGGTTAaaggatatcgtattttttacttgaaaagacactttaccc
cctggatatctgctcccttgtagatatttaaccccttggatatccacttt
tgaacaaaaatcgttaaccccctgatTATACGATATCCTCAACAAgaggg
ggcacggactatttctggaaaagcccaatatgaCATGACTACTGGACCTG
GTAGCTAAATCAAATAATTGCAATGCTATTACAAACGTAAAAGTATTTTC
CAAATGAAAAATGAGTGACGATTTCATCACAGCATACTATATTTAAAGCA
TTGATGGCATATACAAAATGATTATCTGACGACTTGACCAACGTCTATTA
TCTTTCAACTTGTGTTAGAAGATATGATGAGAAAAACATACTTTCCAAAT
CTATTGTGTGTCCGGAAAATTGATCACAATGAACTGcataaaagttgaaa
atgatgGATTTATCCAATTTTCGCATAATTGACTATTCAGAGAGCTATTG
GATTTGTGATGTTGAAACCGTTGAAATCTGTTGAAATCGAAGGTAAGCTT
ATTGTTTTCTCTCATTTTATTTAAAGTTGAAAAGCAAGGAGTGACCTGgt
ttgaatcgcagacctctacaaagcAGAAGGTGGTatatacccgggggggg
gcactcaatctaaaaacgaccatacgttcggcccaaaatttgggttctaa
aatcggacccttacagtgcagtgaatttccatgaaaaatcatacccttac
agtgcacttttttttaatttctcccccgtaagggcgaaaatttttgcaat
tttccgagaaaatgtggaatttttcctccaaaattggccaattttgtgcc
aattttaccaaaaaattgaccttttatcacaatttcctacccttacagtg
cagttcagtgcagttttgtaatttcctacccttacagtgcactagctgga
ctatgaaaaacctacccttaagggccgaacgtctggtaggtcatttgcCT
TGAGAGCCCCCCCCGGGGgtatataaggagcacgaatccgttagtggatg
ccaacAGTATACGATTAATGCCATTTTTCTTTGGTCATTAGGACAGAAAA
AGTAGAGTTTTATtgaccaaagaaaaatagcattGATAAGGTATAGCCGA
AAGCTAAAGGCGAATCTCCTACGTAGGttttgaagccacttatttcctac
GTAGGTTGCGCGGCCTACatggtttttatacaaatgcTAGGTGGAAAGTA
ACATCTACCGGCAGAATTCGAAAAGAGTAAAACGTGAAAATAAGGAAAGT
GCTGGATCCATCCGAAATACGGTGCACATTTTAGGGCTTTTCATAGTTCG
ttcccccctttcttaagggggggatgacaccttccgaaAGAATAAAGAAG
GGGGGGatcaaaaatttttatgaaaagggGGGTAGCGAGGAAGGGGgata
gtttaagaaggggggcttaCGTGTACTCGATGGTTTTGACATGTAGTAGC
CCTGTAAGAGAATAGTCTTTTTGACTAGCAAGACAACAAAAACATACTGT
CAAAATTTATAATGCCTCTAGCCTTGCAACTCAtcgcaaattattttgat
aaagaaaattttaagaaaaaaatctgACCTATAAATAACAAGATTGGGCG
TGGTCGACTAAAATTATTTACATTAGGTCAAATTTCTAGGTGATCAATTG
ATAAaaatctacattttttttttaaaagaactctTCTCAAGGAgaggatt
ttgaaattttcaaatgttgtttGTATTTTAACTTTTGAGGTTTTCTATTT
CCCCCCTCCTCCTTTCTTCCCCTTCGTTTCAAGATAAGAAGAAAGCGTTT
CAATTTTCCTCAAAACATCCGTTTAAGTTAAACAACCTCTGGTGACTTTT
TTGTTACAGACAAAACTTTTTCAAGAATATGCTTGAAGTATAATCAAAAA
GAGGTTGCTTTTTTATGACTGGAGGGGGTTcatctaaagaatcctacatt
tactaaaaatagtcaaaaacaacgacaaatttcatatataaagaacgaca
aatttcgccGTCCAAAActccgaccgaaagtgactgtaccacccctacga
ATTCAtccctctttgtttatcacgggaattaactacataaggtttaaaga
acgacaaattacgcatgcgtgttacaatgcaggattttTTAGAGGAATAG
ACTGCTGAGTACCTCGTTGCAACCTTGTACCCGGAACCACTTTGCACCAC
TTTTTTATAGTTTACTGATGGATGTACAACATTTCGTGAGCGCTATCAGG
ATCAAAAAAGAGTGAACTAAGGTTCGATTTTGACGACGTTGTTACAAGAT
GAAAGTGATAAATTTCTTATAAGAGATGTCATTGTTCTAGACTTTTAGGG
TTTAAATAAAATAGTAAGATACATCAttcaaatattcttaactttttaag
ttttatgcctaaaaatgttcttaataacatgttctttttttgaccatttt
cttaagatagggtgtttttgaatccacaaagcctttaaatgtttttaaca
ttttggcaagcgaagccttatgctcttatatagttggCCCAGCAGCGCAG
CGTAGTGGGCCTTTCATCTGCACAGTGCCCGTTTGTtagtagactagagt
ctacttctggctgaactttgctttttgataattttttatgacgctgagtc
cagtcaAGTAGACTAGGAtcatttggcgaggtcgccattttgaaaaaaaa
aaattaaaaatccaaataacaataaaactacttggagttgaaggatataa
taaaaaatgagaaacaaacacggTTAACAGATTTGTAAtgccttattctc
aaataaaaatattgcttcatactgtttttaccttccaaaaacaactaaaa
tctggcggactgttttacagtccgcctaggcaaaagcatattacNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNacgggaaatcgaaagt
aatttcattgggcttgtgatgtttgagagcttggatgttgggaagctgca
agaataaagccagccGATCTCAATCGGATACGGATggaatcaacgatcga
accagtcgaacaacaatcgaaccaatcgaatattaccaagaattttgacg
ttcaattGAAATcggttgattgcgttcgatttggttcgattggttcgatc
gtcgattccgttcgattgagatcgtctcgCTTTGACTTTGAAAACAGATA
TTCTATCTATTACTTCCGTCTGCCAATAATAGGTCGGTCAGTCGATACTC
AATCGAACAGAACCGATGATCTAACCAGATAGAACCCAAGCGAACgatta
aaattttattgttgaacgcaattgaatctcaatagAATATTAGGCCGATG
GTATTTAATGCTATGTTTACCGTAAGCCGCCCGCATGTCAAAAAACTGCC
GCGCCAAGTTGccattattttgttattttggcgcttcatcaagattttga
aagatcaaaacaaacggtCCGGCAAATATCCGGTTAAAAACGANNNNNNN
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NNNNNNNNNTTTTTTTAGCTGGGCCTTCACGTCCTTGGGCGCcttgtttt
aataaaaaacgtgtatcgagTCAAGTCCTTAAAACTGGTTTAATATTAGA
GTTACATCAGCCAATCCTGGCTTCTTCTGAGGGTTTATATCGAGCTTTAT
AATCTCATAAGATAtgtttttcttatgaaaaaacgtgtagagaGGGTATA
AGGTCAAGATCTTTTCAATCCAGAAAACTATACTGACCGTGACAGTTTTG
ATTTAATACTTAACCTCGAAGATTTGCATTCTGTCTCGATTTCATGAACT
TTGGTTGCAGTTGATTTTGTAACTTCTATAAGATGAACTTAAATCAAATC
TACTTCATTTTTGTAATATCGTTGTGATTATTGATTGTACCGGCTCGATG
GCAATAaggcagatgagatggagtttttataagatactttaataattggt
caatgacgcgttttttagaaaaaattaacaaaattgttttattactggtt
aacgaccaaccaaatcaaatgagagcttgtaaaaactccatttcGTCCCC
AATAAGGATGAATGGAAGAATCTGCAAGGCTTTAGACAATGCTATTGTCT
GTTAGAGGAaaagtaaacgcgggaaaatataTATGTGCAGATTTTGTTCT
TCATGAAAGCTGTTGGGATTTCGTGAACTTTTTAAACAGGACACATACAA
ATTTATAATGGAAAATAACTTTTCCATTTTCACTAGTATGAAATTTTCTA
TTCTATTAGAACGGTTCCCCGTTTTGTGGAGGCAAAAAACTGAGCACTTA
TTTTAgtcataggcgtagcgagataccctgcaaaatttatgagggagtgc
agacgtttatgacatattcattatcttttgataaaacaaagacaataatt
acagtgtcgtaaaaaccgctctcatccataaattgtgaagggtatctcgc
tacgcctatgaatttagaaatttcttttttctgcgTATGTTGTCATATAT
TTCACATAAAGATCACAGCTCGATAGATATTTTCTCCTTGAAAACTTGGC
TTCTGGTACTCAGGGTAGTAAATTTTAAGTTAataaacacctccgccact
gttAACTCCGCCCCGATCTAAACTCCGTTTTTAAATTTATCCCGTTTCCT
GAATTATACCGTGACATTTAGTGAcattgtgtagacgataggatcatTTA
ACAAGGCTTATGCTTGCTGTGCTTAAATTCGCGTTAGAGaattttatcca
ttttgattACTGGactcgtttataatgcgtgtaatgaTATAGGcgttact
cttgtctcccgaatagacaggggggtccgaataagcagggaggtaggaaa
attttctacattctaataagcggggtggatggaataagaggggcgggtaa
tttgaagacataattttttttaactgatatcaatttcaacaacaaaagtg
aaactttaacaaatgaacacgtaggGGTAAAATAAGACTATttatactaa
caaaaaggaaaattttaacaagtttaaggtctatctacactgtaataaaa
aatttgattattcaaattaattagcgggggggggcgtctattcgggagac
aagagtatatgataatacgattattgttacgggatttagtttgtataaac
taaaattgttccctccattactttttgctttatttctactatgtctgaat
caTCGATTTAAAAAGCCCAAGGGGCTAAATGTcatgctttaagccatcgc
aggcaaaaaaaaatgaatatcggaaacaatattgttgctattgttttcaa
aaacccgcgaagcttctgattggtcaaacgctgaaattctattgtaatgt
cacgcgACTTAGGTagaatttcctacctaaccacggcacacttttcagca
aaagctttgcatctagcccttcgggctttataaatctatggtctgAATTA
ATCGTATAgctactttttgataaataacgagattgctcacgggaattttt
tgacccACATTCCCCGCGATCGTGATCAATCGCCCGCGCGTGTACGCTCT
GTGAATTCTGTCTGCTGTTGGCTGTATATGGTGGGTACTGTATGCAAGAA
AAAGCTCCTCTCCTCAGTCTTTTGAGACTTTAAGGAGATTGGAGTGTCCT
AGCCCCCCAGatggaaattctaattttacagGCACTTGCAGGGTTTACAG
CCCGTTTGCAGCAGTCCCACTAAAGAGTCCTGTAAATTCCCTGAGAATCG
GCGATCGGCTCCCGCATGTTGGAAAtgatctaaaatcatttgttatataa
aattatacaggtcATGGCAAATAAAGTTATGGTATGTTTTATCATTGTTC
GCATTAACTGCATTTTGAGTGGCCGAGTGGATAAGGCGGGTGAGCTGGTA
ATCTTGTGAAAGTCATTTTCgagagttcgaatcctatacggtgcgttgga
gtttgtgttattttgtcagcattgaccaaacattttctggttttatgagc
ttatttttttaagaaacaaaaattttctaagtggtgtcacctcagtgcag
tttgactcaagtacagtatttcGAAATAGATCAGGTTGGTTTAgcgggtg
gagagtcaagagtcaagagtcGTGACTTccccttctcttgaaaatccagt
cttccaaaacttttaactaaaaaaatgcataaaaatcgactttcgtcttt
ttttattattatcactttttttcagaaccacaagtgaaaagaaaggcagc
tgaaaaatgattgacaggtctaaaaaatgattgacatgTGCGGGTTTGCT
CACGCGGGTTAAAAATTttcgtgagcaatctcgttatttatcagaatgtg
tatagcttgctagactaccattttgattggtttGTCGGTTTTCAAATGAA
TGTAACATAgacgtctttttataagaataaactatgtaagaacacaaggt
ttcgatggccaatatgttaagaacaagttaagaacattttaaggctatgT
GGACTATGAAAAACACccgttttcttagaaaaatgggtaaaaatggtctc
aaaatggtgaaaataagaacattttaaggtggtagtctaccgagaaatgg
aaaatcatcgaaaaaattgtcgaattttggtttttgggtgttttgagatc
cttaggtctttctgaacatctcctgNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNttaccccctggctgattttacccccgtctttggt
tatttttagaatttttttttatttttagaaatgttaatagttgatataca
tttcctgaaaatttcattttgaaatgtaaagaagttcttgagttattgca
aaaaatgtgattttttgacttttgaaatctggcggtagactaccacctta
agaacatttttaggcttgaaacacaaaaagttaagaacatccgaaggctt
caaaaattgtggatgttcttataaaaaacgtgtaagtttGTAGCACTTCg
atgttattggaatttctaTGGGGAAATACACCCACGGTTTATGCAAACAt
tgaaatattataaaaaatttcttaaaagtcTATCTCTAATGAATTTTCTA
AATAAAAGGGGACTTGAATTTTTAGTTACCCTCTACTTTTGtttaaatgt
tttttggaaGATGGtggtaatttttgttgtttgggTTTTTGTTTGCAAAA
ATTCCATGGTAACTCGAAGTTAACTGAGAATTTTCGATGTCGTTGGGACG
AAGTGAATATTTTATGAATCAATTTATTTGTGATATATTAAAATATTCAG
Tttaatttgaattatagaaaattgttgcgaatgttttttttatttaaatt
cttTATAAATTGGTTTGGGAAAGTGAGACACgattgatgatgtcatcatt
taaCCTTGATGATGAATCTTGTTAcagaattaaatttttttcatggtgca
attttttttcagcaaatggcgaaatacaaaatttgatggaattttttttt
acaagtttttttattagTGTTGAAATCTCATAGAATACGAAAATATTTAG
TTACATGGCTTGATTTAATTTGACTTCttgtattattttttcattttgag
aatTTCAATGAATCTGACGCGATCCTATAATTATTTGGAGGATGTTTGAT
ATGTATGTTTCAAGTGACACTAGACAGAggttcttttggaaaaaaaaatc
aatttgcaTAAAGAAAATTCTATCTACTGACACTTCTTTCTTCCACTACA
GTTAAGGTTTCCGTAACTCAAACGGCCATGGGGAAAAGAAAGccgtttga
gttatggagacactCGGgtagtagaggttcgagttatggagacactTGGG
tagtagaggttcgagttatggagacactCGGgtagtagaggttcgagtta
tggagacactCGGgtagtagaggttcgagttatggagacactCGGGTNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNccccccccccccggga
gaaattctattgttccaaggttaaaaaatccagtatggatagttttggag
tacaatttttaaacattaaatttcgaatggggataaaatcagagtcaatt
tcccagtggggctgaaattctaggatAAAATCatagccaaattttccagt
ggggatgggtcccagcgggtctgtgacacacgGGTGTGTCTATATTTCAC
ATTGAggtcaaaatgtcaaaccacTGTAAGTAAATCATGTAACACACAGt
gttcttttaaacaaaataaagcAAACTCGATATTGCTCCATTGCTACACA
ACTGAAGATTTTCGCATGAAGGTGAAAATTTGGAATATgaagaaaaaagc
aaaacaaaagcaaaaacacAATAAGAAATATAAGATGAATGGAGTTCGTC
TTCAGGTTCATGTTAGTGTGTTGACACTAACATTCTTTCTCTTACTTGTA
AGaaactttgttttgttttgcttcAGGATTAAATGTAAGGTAAAAAAGGT
TAAGGGAAAGCTTAGGAAAGATCTCCCCTAAAATACCAGGATTGACCTTC
GCAAGGGTAGAGCTTAACCAAGAAACTTGGTATAAGTTAAATCGCTCAAT
CTTTTAAAGTTTATGTTTAGGCTAGATTTNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNccccccccccccgggagaaattctattgttccaag
gttaaaaaatccagtgtggatagttttggagtacaatttttaaacattaa
atttcgaatggggataaaatcagagtcaatttcccagtggggctgaaatt
ccaggatAAAATCatagccaaattttccagtggggatgggtcccagcggg
tctgtgacacacgGGTGTGTCTATATATCACATTGAggtcaaaatgtcaa
accacTGTAAGTAAATCATATAACACAcagtgttcttataaacaaaataa
aGCAAACTCGATATTGCTCCATTGCTACACAACTGAAGATTTTCGCATGa
aggtgaaaatttgaaatatgaagaaaaaagcaaaacaaaagcaaaaacac
AATAAGAAATATAAGATGAATGGAGTTCGTCTTCAGGTTCATGTTAGTGT
GTTGACACTAACATTCTTTCTCTTACTTGTAAGaaactttgttttgtttt
gcttcAGGATTAAATGTAAGGTAAAAAAGGTTAAGAGAAAGCTTAGGAAA
GATCTCCCCTAAAATACCAGGATTGACCTTCACAAGGGTAGAGCTTAAGC
AAGGAACTTGGCTTAAGTTAAATCGCTCATTCTTTTAAAGTTCATGTTTA
GTCTCTGAGAGAAGAAGATTTTCAAAGTCATAATCTTCTAATTTCCTATA
AACAAAGACTTTGtgtatgaaaaaaaatgaataatttaaATAAATATCAC
TAGAGAGagagaatgaaaaataaagaatcaaaattgagagaaaaccaaac
agcgaaaaaaatgtgggctttagtttttttttgtcttcttcgtgtttgac
aaaaaatgaaaattgagcTTCATACATAGTTTTATAATGGTAGCTTTATA
ACTTGTCACTGTTTCACTGTTTCTAGTGGATTAGTGCAATGTCCTACTAA
CTTGCGGTTGGCGtgattcaattttcatttgcgTGATAGCGTGATTCAAT
TGTGTTTCGGCAGGTTGGCTTCATCAAGATTTGGGCTATTTATCACTATT
TTTTGCACGATTAACAAATTAGACAGCAAatttcacagccccggtgaaat
tttttttctcagttgggataaaaattcctattgaaatcccaattgaAATC
CCAactgggatagaaattctattgttccaaggtttaaaaaatccagtggg
gatggctTTGGAGtgccatttaaaaaaatcaaatttcgagaggggatgaa
atcaaagtcaatttaccagtgggctgaaattccaaggtatattcccaccg
gggacgaatttttagccaaattttccagttgggctggggtcccagcggat
ctgtgacacaggggtgttttagtGGATTAGTGCAATGTTCTACTAGCGGT
TTGCGTGATAGCgcgattcaatttttcattttcgtgaTTAGCGTGGTTCA
ATTATGTTTCGGCAGGGTagcatgatttgggctatttatCACTATTTTTT
GCATGATTAACAAATTAACAGATCTCGGTGTTTTTCGGAATCATGATGTG
AAGAAAGATTTGACGTGATAAGGGGGGTTGTctcatcccagctggcacac
aacgttgttttaacgttcaaataacgttattggtatctggacgttgtttt
gacgttgtgtgccgacTGGGATTGACTAGTTAGTATACGATTGGAGACAT
TCGCAATAAAACTGTTTTTGTTCGTTGCCACAGTTTAGATTTAAGAGAAA
TCCGAAAACTAAGCCTGTACCAtagttattttctttttcggcttaaattt
ttttttttataagtattgATTTGATCTAGATCATGGTATTTTTTGTTCAT
ACGATTTAGtcctttcaaaaagttttttcgtaaaattcccttaccatttt
gtttttattttgattcataaattctttaaaaaaacatcaattctTTATTC
AGCATAATCCCGTCCGCTTATCAATTGTTTTCCTTCTGAATTTtctgaat
gaatttttattcaaaaatattaaatttaaaatttaatcatatcaatcgaa
attgaaatgatttgatTCTATCGATTCCATAGAACGGCATTAAATATACA
TATCAAAACTTAGattgtttgcttatttttggggttttcggGGTATCAAT
CTCAAATATGTATTTTATCTCcccttttttgtaaatattgaatAATTTAC
ACTTTTGACGAAAAAGAAGTTAtcaattgaaacatttttgtgatttttat
agCAAGTAAATTTTTCTTAGTATCCTCTACAGCTTCTACTTCGTTTACGC
TTAACGCTGATCTAACACAATTTAGACGTTAGACATCGAagcttactctt
aggtgccaaataaacggggggggttcgaataaacggggggtttcgaaaaa
attttcaaatcaaataaacgggggggacctaattaccgggggggttggaa
aatggacttttaaaaaccctaaaacGGGTCAAAAtggactaaatttaggc
tttttagagtaaaacaagaaactttccttttgggagctgggaattttttc
aaaaattaataaacgggagggTCCTGATAacgtccgggggggggggttgg
aaaatggacttttaaaaaccctaaaacGGGTCAAAAtggactaaatttag
gctttttagagtaaaacaagaaactttccttttgggagctgggaattttt
tcaaaaattaataaacgggagggTCCTGATAacgtccgggggggggggtt
gaaaaaaatcgaaaaattaacaagcgggggggcccgtttatttggcacct
aagagtaaatgTTTATAAGAGTGCTCAACCAAGGGAGCATTTCGTATCAT
TAAGAAAAAAGCAACTACTGCATTATCTTCAGTAGTAGACGTTTAATAGA
CGTCGACTTACTGTGTTGTGCCTAGGTGGGAGAACTCATCTTCGtatttg
aatattgaaaattttgggCATTTTACCGTTTTTCCAGAATTTAAatttcg
ggcgagaattgcgaTTTCAGCACTTCCACTTTACTTCATTAGatatttcg
atttcgattttaaaaGGGATtcagtggcttctaggctatactACTAGCCT
TACTGGAACATCTTTGACCTTTtgaatcctgagatcctaaggtcctaagg
tGCTAAATCTcaagttaaaactcagagttaaaactctacgtTCCAATAGT
GAATTCGAGCgcttaaaaataatttataatgtTTAAAACCCCTCCCATTT
TTATCAAATACTATGCACTTTATTGTAGCACCCAGATACAGAAATCTTCA
Tccaacacgctaaagctctgatggtcgggaaaatttttaacatctggaag
gtcTCCAGGCTATTTTTGTCGATCTTTTTAGAGTTACATACTAACCGTGA
TACTGCTTTAAGCGTCAAGTCACTACTCAACTGTTTGATTTTGATTATTC
ACACCTGTTTTTACAGCGTagcatcccagctggcacacaacgttgtttca
acgttgtttcaacgttcatctaacgttatatggacgttgtgaacgttaaa
taaacgttgaaacaacgttgctcTATTCTCACTCCAGATACTCAATATAG
AAGGATTGCACAAACTCTGGAAAAgagttgacaaaaaaaaaacaataaaa
aatgaagttctacCCAGTCATAGCCGCCATTTTGGTATTATTTTCATCAT
CAAGTTATGGCCAATCCACATCAAGCATCGAGCCATCGTCAACTGCTTCA
CCAGCGGAAGCCTCTCAAAGTCAGTCTGTTACCCCTTCAGTATCCACCTC
GGTCAGTGAGTCAGTAGGCGGGAGCGAAGCTACCTCCTCAATGTCAATGT
CAGAATCAATGTCACCGTCTCAATCAGTTGATGGAAGTAGCCAATCAGTT
GATGGAGGATCTGTATCTCAATCCGCTTCTGCTTCAAATTCACAAGATAT
GCAATCATCCTCCAGTCAAGGTACACCCTTTTACACTTTTTCTTCTACGA
AAGTCTCAAAATATGTCGGGTTGCCCTTTGCTTTCAAAGATCGACTTAAT
GTTTGTTAATACACAATCTGagaatattttttcctttttggagGGTTGTC
TATAAACCTTTCttttaagcaagaaaaagtgaagcctcaAGATTTATGCC
GCATTCAGAATGACGGATTAAGTCTATATTCTTTGTTTTCGTGTAGCATA
GTTTTCATGACTGGTGATGGGTTTTCTTTCAATCTGGTGTTTGTCTGAAA
ACCACGCGAGacacgcgttttggatgggaaatgagtggcattatttccca
tccaagactTTCAACTCTAGCCCTTTCGGGGCTTTAAATTCAATGTTATT
TCCTGTTTTAGCTGGTGCGATGGCGTCGAGCAGTATGTCTGTATCCGCAT
CAGCCAGTGCAGGTGGTGCAGAAGAATCTAGCAGTGTCTCTGCTTCGCAA
TCCCACATGGAGAGTTCAGCAACAGTAAGCGCTTCCATCGATCCAACACA
ATCATCAAATTCTATTGATGTTGTTCAAACTTCTGCTGTGGCTGAAGGTA
TGTAAAACATCATTATTGTGCGAAACATCGATGAATAATAATTTTCAGTA
GTAGagagtctgcgaccgcagtcggaggcggcccgaaggctcctcttttg
atAAATGTCTACCCAAAAGCAGGCGAGGGAGCCACtcttgctccacttac
ccttgatccttcacttgattgctgagcatcaagctgaGAGGCATCAAGCA
CCATTTTTGTACTAAGTACGAAGTCTTTTGTATGACCCGGCCGGGGATGG
AACGAACGACTTGCGGTAGCCGTCGCACGGTAGCCGGATGCTCACTGTAC
TACGACTTCACTGAACTTTTGATTCGGGATCCCTCTTGAATGGGTTATTC
CAGAAAATTATTGTGCCCCCTAGATGACCCCTTTTGATTTTCGTTTCAAT
TTTTAAGGACCTCCCTGGAGGATTTTTGTTTATTGTTAAGAGGCCAGAGG
AGCTGATTTTTATCAGAATCAATTTCTGTTATTTGTGACAATAATTTCCC
AGTTcaaattttcgtgattttaatATCTTTCAGGAACTTTTACCAAATGG
ACAATGGACTGTGAAAACAAATGTTGTGATCACGCCGAAGACGGTGGATG
GAAATCCTCTGCAGATACCATGAAATTGAACCTTACTCGCACATGCGCAG
TATCCAAATGCACACCTGATAAATACAACTCTACACTACAATACGAAGAA
ACTTGTAAAGAAGCCTGCGATGAAACATGCAACAGTGCAGGTGAGTTTTC
TTCTTAATTGACCATCCCTGTGTCGCACCATTTTAAAAGAGGACACTGTT
TTGTCGTTTTTTCCCTtttctgcactaagattcttgtcacttttccggaa
tctttccgctattttcATCCGGATAACCGGCATTAGATTagaaagggttt
gtttctaatggtacggaaaatcttgtgtttactcacgaaactgcctaact
ttccgaagtcctggtctttttccgctagtaaagtggcaaaggaatctcaa
tgcggaaatgggaaacttataaaaaatggTAATGGTATGTAGTTTTGAAA
TCCTAATTGGAATCCAAACTGGCTAACAGACCTTTTGGTATAGTGGTGAa
tttcttaaccctattcataccaAGGTTTTAAGGACGATTCAAAACTAGGG
GGTTCTTAAAAAATTCACCTTAATAAcgcaaaacatcaaaacaatatCCA
TTTAACATCCCAGCTTTGAAACATTGACTACCAAATAAAGTCCTATCTAT
GCCCcagattattttcaatttacaaaatttgaatttcatgttcttttaaa
attgttcttatgaaaaaaaccaCCGAGTACTTAATCATGTAAttgttctt
ttgttcttttcagcGTTATTGAAGATCTCTTCGATGTCACTGATCATCTT
ATCATTCGCCATGTTCAAGAATATTCTCATGTAAAAAGAGCACCAAATGT
AAATAAAATGTCACGAAATATACGTAACTGGTAAAAAGATATTCTTTTGG
GTGATGGTGGAACGTAATTAAACTGTGTGGTGGAGGCTAATTTGGAGACT
GTGTGCCCCATGCGTTTCATGTGATAATGTCGTGTAAAAGACGTAAAATC
ATCTTACGAGAATGATATGGCAAAACTGCGTCTGCGTCTAATCTTAATAA
GTTTACGGTGGTAAGAACTCTGGAATAGTTCCGTCGAAAAAGATTAATTA
TGGAATGAAGGTACgacgaaaaaagattttaaatagtttt Coding sequence (CDS) from alignment at sc0000038:394417..416456+ >TCONS_00003894 ID=TCONS_00003894|Name=TCONS_00003894|organism=Clytia hemisphaerica|type=CDS|length=3132bp|location=Sequence derived from alignment at sc0000038:394417..416456+ (Clytia hemisphaerica) atgaagttctacCCAGTCATAGCCGCCATTTTGGTATTATTTTCATCATC AAGTTATGGCCAATCCACATCAAGCATCGAGCCATCGTCAACTGCTTCAC CAGCGGAAGCCTCTCAAAGTCAGTCTGTTACCCCTTCAGTATCCACCTCG GTCAGTGAGTCAGTAGGCGGGAGCGAAGCTACCTCCTCAATGTCAATGTC AGAATCAATGTCACCGTCTCAATCAGTTGATGGAAGTAGCCAATCAGTTG ATGGAGGATCTGTATCTCAATCCGCTTCTGCTTCAAATTCACAAGATATG CAATCATCCTCCAGTCAAGCTGGTGCGATGGCGTCGAGCAGTATGTCTGT ATCCGCATCAGCCAGTGCAGGTGGTGCAGAAGAATCTAGCAGTGTCTCTG CTTCGCAATCCCACATGGAGAGTTCAGCAACAGTAAGCGCTTCCATCGAT CCAACACAATCATCAAATTCTATTGATGTTGTTCAAACTTCTGCTGTGGC TGAAGGAACTTTTACCAAATGGACAATGGACTGTGAAAACAAATGTTGTG ATCACGCCGAAGACGGTGGATGGAAATCCTCTGCAGATACCATGAAATTG AACCTTACTCGCACATGCGCAGTATCCAAATGCACACCTGATAAATACAA CTCTACACTACAATACGAAGAAACTTGTAAAGAAGCCTGCGATGAAACAT GCAACAGTGCAGcGTTATTGAAGATCTCTTCGATGTCACTGATCATCTTA TCATTCGCCATGTTCAAGAATATTCTCATGTAAatgaagttctacCCAGT CATAGCCGCCATTTTGGTATTATTTTCATCATCAAGTTATGGCCAATCCA CATCAAGCATCGAGCCATCGTCAACTGCTTCACCAGCGGAAGCCTCTCAA AGTCAGTCTGTTACCCCTTCAGTATCCACCTCGGTCAGTGAGTCAGTAGG CGGGAGCGAAGCTACCTCCTCAATGTCAATGTCAGAATCAATGTCACCGT CTCAATCAGTTGATGGAAGTAGCCAATCAGTTGATGGAGGATCTGTATCT CAATCCGCTTCTGCTTCAAATTCACAAGATATGCAATCATCCTCCAGTCA AGCTGGTGCGATGGCGTCGAGCAGTATGTCTGTATCCGCATCAGCCAGTG CAGGTGGTGCAGAAGAATCTAGCAGTGTCTCTGCTTCGCAATCCCACATG GAGAGTTCAGCAACAGTAAGCGCTTCCATCGATCCAACACAATCATCAAA TTCTATTGATGTTGTTCAAACTTCTGCTGTGGCTGAAGGAACTTTTACCA AATGGACAATGGACTGTGAAAACAAATGTTGTGATCACGCCGAAGACGGT GGATGGAAATCCTCTGCAGATACCATGAAATTGAACCTTACTCGCACATG CGCAGTATCCAAATGCACACCTGATAAATACAACTCTACACTACAATACG AAGAAACTTGTAAAGAAGCCTGCGATGAAACATGCAACAGTGCAGcGTTA TTGAAGATCTCTTCGATGTCACTGATCATCTTATCATTCGCCATGTTCAA GAATATTCTCATGTAAatgaagttctacCCAGTCATAGCCGCCATTTTGG TATTATTTTCATCATCAAGTTATGGCCAATCCACATCAAGCATCGAGCCA TCGTCAACTGCTTCACCAGCGGAAGCCTCTCAAAGTCAGTCTGTTACCCC TTCAGTATCCACCTCGGTCAGTGAGTCAGTAGGCGGGAGCGAAGCTACCT CCTCAATGTCAATGTCAGAATCAATGTCACCGTCTCAATCAGTTGATGGA AGTAGCCAATCAGTTGATGGAGGATCTGTATCTCAATCCGCTTCTGCTTC AAATTCACAAGATATGCAATCATCCTCCAGTCAAGCTGGTGCGATGGCGT CGAGCAGTATGTCTGTATCCGCATCAGCCAGTGCAGGTGGTGCAGAAGAA TCTAGCAGTGTCTCTGCTTCGCAATCCCACATGGAGAGTTCAGCAACAGT AAGCGCTTCCATCGATCCAACACAATCATCAAATTCTATTGATGTTGTTC AAACTTCTGCTGTGGCTGAAGGAACTTTTACCAAATGGACAATGGACTGT GAAAACAAATGTTGTGATCACGCCGAAGACGGTGGATGGAAATCCTCTGC AGATACCATGAAATTGAACCTTACTCGCACATGCGCAGTATCCAAATGCA CACCTGATAAATACAACTCTACACTACAATACGAAGAAACTTGTAAAGAA GCCTGCGATGAAACATGCAACAGTGCAGcGTTATTGAAGATCTCTTCGAT GTCACTGATCATCTTATCATTCGCCATGTTCAAGAATATTCTCATGTAAa tgaagttctacCCAGTCATAGCCGCCATTTTGGTATTATTTTCATCATCA AGTTATGGCCAATCCACATCAAGCATCGAGCCATCGTCAACTGCTTCACC AGCGGAAGCCTCTCAAAGTCAGTCTGTTACCCCTTCAGTATCCACCTCGG TCAGTGAGTCAGTAGGCGGGAGCGAAGCTACCTCCTCAATGTCAATGTCA GAATCAATGTCACCGTCTCAATCAGTTGATGGAAGTAGCCAATCAGTTGA TGGAGGATCTGTATCTCAATCCGCTTCTGCTTCAAATTCACAAGATATGC AATCATCCTCCAGTCAAGCTGGTGCGATGGCGTCGAGCAGTATGTCTGTA TCCGCATCAGCCAGTGCAGGTGGTGCAGAAGAATCTAGCAGTGTCTCTGC TTCGCAATCCCACATGGAGAGTTCAGCAACAGTAAGCGCTTCCATCGATC CAACACAATCATCAAATTCTATTGATGTTGTTCAAACTTCTGCTGTGGCT GAAGGAACTTTTACCAAATGGACAATGGACTGTGAAAACAAATGTTGTGA TCACGCCGAAGACGGTGGATGGAAATCCTCTGCAGATACCATGAAATTGA ACCTTACTCGCACATGCGCAGTATCCAAATGCACACCTGATAAATACAAC TCTACACTACAATACGAAGAAACTTGTAAAGAAGCCTGCGATGAAACATG CAACAGTGCAGcGTTATTGAAGATCTCTTCGATGTCACTGATCATCTTAT CATTCGCCATGTTCAAGAATATTCTCATGTAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
Feature Name | Unique Name | Species | Type |
TCONS_00003894-exon-sc0000038-1491911889:394417..395158 | TCONS_00003894-exon-sc0000038-1491911889:394417..395158 | Clytia hemisphaerica | exon |
TCONS_00003894-exon-sc0000038-1510915933:394417..395158 | TCONS_00003894-exon-sc0000038-1510915933:394417..395158 | Clytia hemisphaerica | exon |
TCONS_00003894-exon-sc0000038-1575043694:394417..395158 | TCONS_00003894-exon-sc0000038-1575043694:394417..395158 | Clytia hemisphaerica | exon |
TCONS_00003894-exon-sc0000038-1491911889:413754..414136 | TCONS_00003894-exon-sc0000038-1491911889:413754..414136 | Clytia hemisphaerica | exon |
TCONS_00003894-exon-sc0000038-1510915933:413754..414136 | TCONS_00003894-exon-sc0000038-1510915933:413754..414136 | Clytia hemisphaerica | exon |
TCONS_00003894-exon-sc0000038-1575043694:413754..414136 | TCONS_00003894-exon-sc0000038-1575043694:413754..414136 | Clytia hemisphaerica | exon |
TCONS_00003894-exon-sc0000038-1491911889:414528..414713 | TCONS_00003894-exon-sc0000038-1491911889:414528..414713 | Clytia hemisphaerica | exon |
TCONS_00003894-exon-sc0000038-1510915933:414528..414713 | TCONS_00003894-exon-sc0000038-1510915933:414528..414713 | Clytia hemisphaerica | exon |
TCONS_00003894-exon-sc0000038-1575043694:414528..414713 | TCONS_00003894-exon-sc0000038-1575043694:414528..414713 | Clytia hemisphaerica | exon |
TCONS_00003894-exon-sc0000038-1491911889:415250..415456 | TCONS_00003894-exon-sc0000038-1491911889:415250..415456 | Clytia hemisphaerica | exon |
TCONS_00003894-exon-sc0000038-1510915933:415250..415456 | TCONS_00003894-exon-sc0000038-1510915933:415250..415456 | Clytia hemisphaerica | exon |
TCONS_00003894-exon-sc0000038-1575043694:415250..415456 | TCONS_00003894-exon-sc0000038-1575043694:415250..415456 | Clytia hemisphaerica | exon |
TCONS_00003894-exon-sc0000038-1491911889:416080..416456 | TCONS_00003894-exon-sc0000038-1491911889:416080..416456 | Clytia hemisphaerica | exon |
TCONS_00003894-exon-sc0000038-1510915933:416080..416456 | TCONS_00003894-exon-sc0000038-1510915933:416080..416456 | Clytia hemisphaerica | exon |
TCONS_00003894-exon-sc0000038-1575043694:416080..416456 | TCONS_00003894-exon-sc0000038-1575043694:416080..416456 | Clytia hemisphaerica | exon |
The following polypeptide feature(s) derives from this transcript:
Position
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
sc0000038 | supercontig | sc0000038:394417..416456 + |
Blast
The following BLAST results are available for this feature:
|