TCONS_00003877 (transcript) - C. hemisphaerica

Overview
NameTCONS_00003877
Unique NameTCONS_00003877
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1586

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00003877 ID=TCONS_00003877|Name=TCONS_00003877|organism=Clytia hemisphaerica|type=transcript|length=1586bp
gaaaaactTCAAAGAAGCAACCGACTTGGCCTTCTATATGTAAAGGGCTT
CACTTACATCCTAATGATTTGATTACCAATTTGTGGAGTCTTGAGAATGT
CAGTATATGTTGTCGTCTTGAAAGGATCATCTCATATCTCTACCACTACC
TCCAACAAGCACAGACCAAATCCAATGGAATCGTTCATCGCAGGATCAGC
AAGCGGAGCAATCTCATGCTTTTTGTTCCAACCTTTGGACTTGATCAAGA
CTAAGCTCCAAGCGCAAGTTTCAACTGCTACTTCACTTCAACAAGCTATT
GTCGATGGTAGACTAGCTCCTAAACATAATTACAGtcaaagttCTGTTGC
CTCTTTGCTCACCCAAGTTGTTCGTGAAGACAAAGTGCTTGGACTATGGA
AAGGTTTAACACCTtCGCTGTACAGAACTGTGCCAGGCGTAGGGATGTAT
TTCTGTACACTACACACAATGAAAAGTGTTTTAGATGAAGAACCAACCTT
CTATCAGAACTTAATGCTTGGATTCACAGCTCGCGCATGCGTAGGAACAG
CTGTTTTACCTATGACCGTCGTCAAAGCACGCTATGAgAGCGGAAAATAC
AAATACAAAACCGTATCTGACGGATTACGTACCATCTGGCGTGCAGAAGG
ACTCCGTGGTCTATTCAGCGGATGTACAGCAACTATTTTACGGGATGCAC
CGTATTCCGGAATCTACCTCATGTTTTACTCACAAGGAAAGAAAACTATG
AAAGATTTCGCGTCTATCGATGAAAAAGATACAAAAGTTCATTTCATCTG
CGGTATAAACGCGGGATTGATGGCATCATTGGTCACACATCCTTTCGACG
TCATCAAAACACAAATGCAACTCTACCCAGAAAAATACCGCGGTACTCAA
CACTGTATCAAAGTGATTTTCTCACAATATGGATTTGCTGGTTTTATGCG
TGGACTCACGCCCCGCTGCGTGCGTAGGACACTGATCTCTGCTTTATCTT
GGACCGTTTTTGAGGAGATTATGAAACGACTAAAATTAAGgatctaaaaa
aaaagaaaaatatatattttcttaaaaaccttttttttgataTGACAAAA
TGATGTAAATATATGTAAATaaattttagttatttttgcaaaaagagaTA
TATTCAGAAATTTATGGCTTATATATTAATACTAtttcacaaaacaaaat
acaattactattatttttttttacattgtCGCTATGAATGTTATAAATAG
AATTTATTATTGTTGTAGCCCTGTAAAATTAGGTCGTTTAAAAGTATCTT
TAGCGTTTTGACTTAATCTACTAAAGATAAGTTTTTTTTGCTGTGGAAAA
GCGTTTTCGTagtaaaatgaaaatgttttcaaaaaggaGACTTAACCAAT
GATCTGGTCAGATATTTGGCTCTCGTTTTTTCCCTTGTGTATTATTAAAC
atgtaaaattatgaaatatataaaattaagaagaattATTTTCACAAAAT
GTAAATAGGTTGATGTaaataacaataaaatgtaTGATAGATAGAACTCG
TTAGAGAAGAAATATGATTTGTATTAGATTGAAACA
Run BLAST on NCBI

transcript from alignment at sc0000038:316167..329534+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00003877 ID=TCONS_00003877|Name=TCONS_00003877|organism=Clytia hemisphaerica|type=transcript|length=13368bp|location=Sequence derived from alignment at sc0000038:316167..329534+ (Clytia hemisphaerica)
gaaaaactTCAAAGAAGCAACCGACTTGGCCTTCTATATGTAAAGGGCTT
CACTTACATCCTAATGATTTGATTACCAATTTGTGGAGTCTTGAGAATGT
CAGTATATGTTGTCGTCTTGAAAGGATCATCTCATATCTCTACCACTACC
TCCAACAAGCACGTAAGTTAAAAACTCTAGTGGCGGATGTGAGGGGGTCT
TAAAATTTTTATGAGGAGTATAAGAATTAGTTTAGACGACCGACTTTCTC
CCCTgtctaccttattggaactaattttcgcgggaattaattttagcgtt
tttcgcggtttttcgtcaaaaatcgaaaatttgataccgcaaaaaatttt
tagagtttataaaaaccgcgaaaattaattcccgcgaaatacaatttttt
ccaattttatcgaaaaatttgaaaaatccctagaaaatgaaagaaaaagg
gcaaaaccgcaaaaatttaaacccgcgaaaattcccGAATGGGAAAAACt
ccgaaaattaaaacccgcgaaatgcaatttttcggatattttttttagac
cacaaaaattagttcccgcaaaaattagttccaataaggtattctaattg
ttagagtaggcagaaagagggcacaaagttggttgttaaaaaatttgctt
gaaaaaggttgaaagaagacattgcattgacgtcaaaagagggctatgca
tcgactttagacagcccactttatgccctctttaattcacgattagaata
ggcagggcaaaacGTGGGCCGTCTAAAGTAGAGCTAAgatcatgttcaga
cgttacaaTTCCGTtccgctccgaaacgaaatgaagccattctattggtt
acattcaagttttacgtcacgtcacttctaaccaatagaatggcttcatt
tcgtttcggagcgaaacagaaccgtcacgtgcgaacatggtctaaataAA
AGAAACACTTCTCCACCAGAAATTTTTGACCCACCTCAGATACACCACTG
ACCTTAAAAATAAGTCATTACCAACTGTtgacaacattttttgaaatacg
TTTTAGTCGTAATGTCACAGTTTGGGTCTCATGGTCCTCATCTCCTTCGA
GCGAAAATGGCAATTTCAAAGTTATTGTGGATAGGACCTTACAAGACTTT
GCCGTCTTAttcaaacacccctgtctcacaaccccggtggAAATTTTTTC
CACAATGGGGGTGaaagtttctattgaaatcccaattgggttggaaattc
tattgttccaaggttaaaaaattcaatggGGTTGGTTTGAAATCCGAATA
GGGATGAAATCAAGtgaatttcccagtggggctgaaattccagggtgttt
ttcccaccggggacgaaatttttgccaaattttccagttgggctggggtt
ccagtgggtctgtaacacaggggtgttattcaAGGTcttgatttttggaa
tttgacaaaaaatgtgtCTCGAACAATTAACATTTCAAAATCTATCTATA
CCTCTTTGTATTGAATCTacacacacaaaaacaaaataaacataCAATTT
TCTTTCTAGTGCATCTTCATTCTTATTCCGTCTTCTTTTCATATTCCACA
CCAGTTCAAATTCACATGGAAATATTGTAtatcttttttgattttctgtt
tcctcaaaattcttaaaatagatGGTTGGTTTCGCATCGAAATTCAATTC
TCAAAAGAGTGTCTCTGCGGAAAAGAGCTTTATAttccttattttcaatt
taacGCCTCGCTCTCCCTCCTTTGCCTCCTTGCTCTTCTCTAGAGCTATA
AAAAAAGCAGGTAGAATCCCATTTCTATGATAAAGCTTCTCTGACTTATA
GTAGCACTACTACTTTTAGCCTAGTTAGCTTTAGTGTTGAAGTTTTCAGG
TAAGCACAAGATTATTTGATATACGTAGGATGGATAACAAAAATGAGGAT
accttttgttttgtgttttcaGAATTGAGAATCCTTATCGATACGATACA
GTACCTTTTTTAAAGGACGTtcttttctaaaactttttgcTACAAAATTC
ATACACAGTTAGATTTTTTTTACCGTAACCATCTTTTAGAGAAATTCTTA
GTCGAAATAAgttgaattatttttaaatgtCGTAGTTGAGTAATTCCTGA
GTTGAATCACACACCAATACCATTTAGAAATGTTTATCATTTCCAAGCAg
acttttttactcttttttatTTCCTGGCTCTACAGAGATATTAAAGATGA
GATGCGTAAGCTGTTTTGCCTGAAAATTAATCGCCTCCTATTATTTAGAT
TTCTCACTTTTGGTTTTATCCTTGAAAACTCATAAATAGAACATATAGTC
ACCTCTGTCTAATTCAAACCTCTACAATTCTGTAACCTCTGTAACTTGAA
CTACAATGCTGGGCCCTCTAGTTGGAAGGTGGGATAAAATaccttctgta
attcgaatatttctctaatttgaagaaaattatttGCACAGAGATTCATT
ACCCAAACGGGATACCTTGTTTAGAATGTGTTCAAATTAGTATTTTTCTA
ATCGACTCCAACTCATTATCAAGCGCGCCACGGATTAATCTCTATTCATC
AACTACTGCATTTATTTACCTATTTCAACTGTACTGATGACAAATTAATG
CATGTACCTACCTGATTAATGTTGTCAATAGCGCATAAGTTATTTTGATC
TCATCCAAACGTGTTTTACTCTCCTATGTCTAACCGGTTTTACCGGCATT
GACATTTGTAAACGTCTAAACATTTTTTAGCGAATTAATTTGTCCTCGTC
CAGCCTCATCTGTtggaaaatattatataaaattgATCACTTCTCACCTG
TTATTTTCATTATTAAAATCTAGGTCATATCATTTTATATTTATACAAGA
TTTATACAAGCGGGTGACTAAGAACTAATGATGATGCCTCAGAGTTCACC
CCCTGTTTCCAAATTTATAGGCTGAACGAGTGTCTTTTAGCCTGAGTGTC
GCAGCTGGGGGTCTGGCGATCTGTGGTCGTTGAATGTTGCCGTTGTCGCC
ATCTCCTCATTGTCCTTCGATTTAGGCCTGAaataatttgaccaaccgcg
aaattaaattccgcgaaaatttcttcccttaaggtagtagtCACAGATGA
GACCTCCTCAAAGAAATTCCCCTTGTGGGAAATATTTTCATCTTATTCAT
ATTATTCACGTACGTTTGCTAATGAACTGTCTTCCCCCCTCCTTTGAGGG
AATGGTGGTGCGAGGGAATGAAATTCGCATTTTTGGGtatagttttgata
aatttagcTTTTAACTTTCTCAAACAAaattctgattactcaaagtgcTT
TTTTGTTCAAACTAAATATGATTAGCAAATTGAACAAGGTGTTAATTAGT
AGTTGTGGGCCCTAGTAGGGGCATCTATATACACATTTTTCTATATGTGA
ACAagctaaaataacattttaatatttaaaatttaaaaacagttAAGCGA
TATATTTCGGAggttgcggactctaaaacacctaatttcttaggaaaatg
gacaaaaataaactaaaaaataaagaaaatgagaaGATGTTAGGAATAAT
TTTAGGTTTaatactcaaaaagttaagaacatccgaaaactttgaatgtt
cttataaaaaacgtgtagtcctTCACTCTTCTACCAAAGCCATTTACCTT
accgagcagattctgatacttCAATGAAGGCAATTGCACCATAAGAGAAT
CTGCCTAGAATAGCGGAAGAGGCTTCGATCTTTTTCAACCACATTTGAGA
GATGAATATTTTAAATAAGATTTTGAGCGCGGTGACTGGCTAAAGCAAAC
CATTCTCGCCGAAAtagtaggggccactatgtcgcgaaaaagcttcccgT
GTACAGCAgcaatgattgaatattgttccttgaatgtagaagatcaaaat
ttaagAGGTGGGACCAGGCGTGACCACCCTTTGctatggaaactgacgtc
attggttactatggcaaccaaaataaaaagtcgttaaaattgaaaaattg
ttcattCATTgtccattcgaaagagcatgaaaaactgataaagaaaaagg
tcacaacctatatctgaaaatgaatatatcaggagatattaaggaaataa
ggcaaaatgacgtcctGAAAAGATGACGttatcgaaaaataaaattgcca
aaattcaaAGAATACCTTCCAGTAAACATAAAGTATTTtaacgaaaaagt
ctgaaaatcctttttaagaagtctattagccaaaattgatattttaaaat
tttgcctgtaatgtGCTAGCTGCTGCGCGTAACCTTCGacaggcaaaaat
tgaaaatctcaattttggCCAAGAgactttttaacaaattttcaaacgtt
ttcgtaATAATGACTttcgcagaatggatgatctgttgttttttttcggg
ACTTTCTGCTTAAAAATGTAACAGGAAtatcaatagaccttatcggagtt
tttgatttttctaaagaagTGATGCaatgtgggattgtttcgggagtatt
acaatagaaatctgttaggaattcctcgagggaattctattgtaatactc
tcgaaacaatcccacaatgcatagcttttttagaaaaatcaaaacctccg
ataagatctattatcTGTATCCGGGCAACTCTTTATAATGGACTTCACGG
CCCTGACGGTTCACGGCGCTCTAAATCGCCACGTCACGGTTACACAGCAG
GTTAAGTTTAGGTAGCAAttaacaatagacgatatcggcttaaNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNttcgaaagagcatgaaa
aactgataaagaaaaaggtcacaacctatatctgaaaatgaatatatcag
gagatattaaggaaataaggcaaaatgacgtcctGAAAAGATGACGttat
cgaaaaataaaattgccaaaattcaaAGAATACCTTCCAGTAAACATAAA
GTATTTtaacgaaaaagtctgaaaatcctttttaagaagtctattagcca
aaattgatattttaaaattttgcctgtaatgtGCTAGCTGCTGCGCGTAA
CCTTCGacaggcaaaaattgaaaatctcaattttggCCAAGAgacttttt
aacaaattttcaaacgttttcgtaATAATGACTttcgcagaatggatgat
ctgttgttttttttcgggACTTTCTGCTTAAAAATGTAACAGGAAtatca
atagaccttatcggagtttttgatttttctaaagaagTGATGCaatgtgg
gattgtttcgggagtattacaatagaaatctgttaggaattcctcgaggg
aattctattgtaatactctcgaaacaatcccacaatgcatagctttttta
gaaaaatcaaaacctccgataagatctattatcTGTATCCGGGCAACTCT
TTATAATGGACTTCACGGCCCTGACGGTTCACGGCGCTCTAAATCGCCAC
GTCACGGTTACACAGCAGGTTAAGTTTAGGTAGCAAttaacaatagacga
tatcggcttaaaacttgaaaactcagatttgacccccgagaattccccac
aatgctttgtgcggaaaaaagttcacggtgaaattttttccgcacaaagc
attgtggggaatcctcgggggtcaaatctgagttttcaagttaagccgat
atcgtttATTATCAACACCCTGACCTCATCAACACCCTGATCATCATGAC
TCAATTAGCTATTATCTGATTTACGGTTCCGGCTAGCCACTTGTTAATCA
CCCTATTTATAAAGATCACGTGATTCGCACGTGCTCCCAAATAGGCTAAT
TAATAAATTACTGTTACAATTTCCTGCACTTTAACCCCCTGACTGTTCAT
TCTTCTCACGTTGAAAGTGCTATAAATTCTGGTACTTTTCTTCTGAGAAC
TTCAGTCACTGATTTTCAATAGTTTCATCTCACTTGGAGAAGAATTTTGA
ACTTACACATTATACATTTAACAGAAtcttcatctttgttttgatttcaa
acttCTACTTCATCTTAACTTCAAGCTGATCTTTATTTCTCGGTAAGAGT
CACTGTTTGTTAACTTTTCTTCGACCTCGTTTCCAGGGTGTTTTTTTCGG
CAACGTTGCATAAGAGCATATGTTTTCACCGACGATACACTGGAAACGAG
GTCGACTTTTTTTGTTTACCCCTGTCTCTTACAATGTCAAATTGTTGGAT
TGTTCTTTTTCAGGGGGGTTGTAGCGAGTGAGCtggttttttgttttgtc
ttgGATTCAACCCTTGAAAGAAATGTCTTCCCACAAAactgtttcaacgt
tcatctaacgttatatggatgtcgtgagcgttagataaacgtcgaaacaa
cgttgtgtgtcagctgggatatTACGGGTGGTATCAAAAACGGAGATATT
GCGTAAACCTTTCGCACCTTTACACCTATATTCATACAATCTATAGATAG
CATAACTGTAGACATTAGCTTTCTGAAgaatgaatttttcattttttgac
acttttctttggtatatatatttgaataaaagcTGTCAATGTAACGGGAA
ATTAGTGGAAATGATTCTAAATTTTTTATTGTGAGAAAGTgtgaattttg
aaaacaaatgcGATTCTAACGGATTATTTTACTATGATTCTACTATTTCC
ATTGAAACTTAAGAAATCAGCCAAACATCACATGCTCGGgatattcttca
aaaatttatcaataaaaaacactaaatttttaactttactACACTTTGTC
CCCATTCTACCTATTCAGAAGCTTTTTAGACGGAAATTAACGGTTTGATA
CATTGCTTCGTTGCTTTTTTGCGATCCGCCAATCAAAATACAGCTTGTAA
AAAAGGCCTAAAGCTTACTGGGTCATGAGAACGACatcaattttaatatt
ttcctaCCCTCATGTGATAAAATGAAGAcatttgtttgtttcttattttg
GAATTCGATTCtccattttttttgctatatTATCCAATGAATATTTCACT
TTAGCTTCAGTTTAAGAATTTGATTTATGAGTGCTGAAGTTATATATCTA
ATCTGTTTatttttggatttctagaaGGTACTGATTTGACTTTCTTGGAC
CTCGAATTTCTGCAAATTTAGTACAACGTATGTATAGTACTTTACTTTTC
ACTATGCCCTCTTCTGTGTTGTAGAATTTCCCTATCTCATTGGGAATTGT
gactttaatttttattttgaataaatcaatCCTTCCATACATCTTCAGTA
AAAGATTAAAATAACAGAAAATGTAATGTAATCATCAGTAAAAAATGTTG
TTATGATGATGGTACTCTGTTGAGACCAAAACgtttagaaaaattaattt
caaaaatgaaccaaaagtaactttgatttttaatattgtagattatttat
TGTCTCAAATTTCTGAAATAGGCAAGAAAAACTGTTTCATTTACTTTAAC
TGCAACACGAGGCTCTGTCATCATTCCCAACGTCGTATTGTAATACGGGT
AATACTAATCGCCAAGAAGCCACAGAAAATCTCATTCCGTGGATTAATAA
AATCTAGAAGTTAGCTCGTCCAggtcttttttgtaaaaaaacaaggaaac
aagtcaaacattttgaaatgatcatttttttcctcttttggtttttggat
tcaactttatttcctttttttagattttttttctaccTTGTGgtttaatt
tttcttaaaataaacatttttacaaataaGCAAGAAGGTTGGGCACAGTT
AGGGGTATATCAATATCATTAATTGCCTCCCATATGAAAATTAATCAGGA
TTATCCTCTACCCAATTGAAATCTTtgaatagacagactttttaaTTAGT
ACTCTTCCATTGAcaactgttttttttcttcaaacttttttgattaatat
ttcatcatttcaaatttcaaatcgaCAGTTCAAAGCTTAGCTTCCCAACC
AATATATTTTTTCCTCGTACGAACATAGATAACTTTTTGTAAgaattttc
ataaaatctttttcCTATCTATGATTTGATTGATTTAAGCCTTCAGTCTC
AGAGTCATTCATGTCAAATTCTACTACataaattttttcactgaatttct
cacaaaaaatctttaagatGTCTTAAGAGGCTCAAGCAAAAATAGGACCC
TTCCTTTTTTCCACAGTTTCTTATAAATTtctaattcttataaaaatctt
cACTTGTTAGCAACGAATatctcagaaaaaaagaaaattttatttttttc
gtattCAGGTTAATGGAAACTTGTTTGACAGGGCTATCATAGTTATCACA
TGAGTTTTAAAAACGTTCCTCtataatgaaaagaaaatcaatgtaCCATG
ATAAATTATTCATTAACTGTCCATAGACCTCGTCAAACcggttttttaaa
caaaatgctTATCACTGATTGGTTCGTTTGTGTTAAGCTCATCTTTGATT
GGTCGTCTCTATTGTTTTGTATTGACCGTTTTCAAGCACGTGGTTACTTT
TCCGGGACGCTTTAAAAGGCAGTTGTCAACCCTCATTCCACAGTCAAACT
CACAGTTTCTTATAGCTCCTTTGCTACTACTAAACTTTACTCTAAGAGAA
ATTCCTTAGAAACTCTTTATCTCGACATATCTAACAGGTAGAAATCTCTA
TTTTCTCATTATTTCGTTTTCATATCATTTTTTTGTTGAGGTTTTTTTGT
GTGtgaatgtttttgtttcttctcgTTGTAGCGTCTTTTCTATTCTCAGT
CTTCTTCTTATGCAAAGTGAAAGCGTCTTTTTCTACTGTTGCGTGACCAT
TTTATCTATTATATGTGTTCAATTTCAGTATGTACTTTTTTTGGCACAAT
AAAATGTCACCTTCAACAAAATCTTaaccaaagaaaatcaaaaatttgaa
cgtTTTCATCATTACCATAATCACACACAAACACACAATTTAGAAgtaga
aagaaattcaaaaaaaaaatcacgattttaaccattttcactaaaacttt
ctttttttcttttctcttttttgatcCTTGTGTAGGGACTATAGGTTTGA
ATTTCGAGAATCAAGCTCGCTCGCCTGCTCGCTCACAACTTTAACACTCT
AAGGACTCACTCACTCGGTTTTATCAGCACACTGTGTGGACACACTCACC
CAAACAATGGATTCAATATGGCAGACGCCTGCATTCAAACCAACCAACAA
AAACCAGAGTGTCCTTAAATTATCGGAAAGGTATACAGAAGAGTCCAGAA
CCCGGACTCGAACCCAGGTCCCTAAACCTGGGACCCAACtcccaattttt
aattattatttcaTTCTTCAGGGTGTCTCGTTTATAATGGCTTCTACTAA
CTTAAATTTAACTAAATCCTCATATTTCTCATTTCTTCAGAGACCAAATC
CAATGGAATCGTTCATCGCAGGATCAGCAAGCGGAGCAATCTCATGCTTT
TTGTTCCAACCTTTGGACTTGATCAAGACTAAGCTCCAAGCGCAAGTTTC
AACTGCTACTTCACTTCAACAAGCTATTGTCGATGGTAGACTAGCTCCTA
AACATAATTACAGGTACCTTTGCTATATTACTCTTTATAAGATTTTTAGA
GGGATTAACAGGGctcaaatgtttaaaatttatgtcattttacCCCAAAA
TAACAGGAGGCAAAAACTCAAAGTTCACTGTTTTATCGGAAACAAACTTA
CTTTTTCCTTcagaaaatatttaatttgaTCAGATAGAATTTGCCAAACT
TTAAGTTTTTCtcttcctttttatttttactatcAATCTACTATCGATTG
TTCATTTTGATGATagttagaaaaattgaaatcgcagcaaaaataataat
gttaaattattcaaaaatttaaaattctgtCTATTCCCATTGAAAACACA
CGTTCTGTAGGTAGCTTGAAATTGTAAATTTGAAGAgtggaaaaatttaa
ttttttttattttctttttcccttttttttagtcaaagttCTGTTGCCTC
TTTGCTCACCCAAGTTGTTCGTGAAGACAAAGTGCTTGGACTATGGAAAG
GTTTAACACCTGTAAGTATTGCTCCTTGTTATGATcaagtgtaagaaaat
atagaACTGTGTTGTGGAGCAAGCATTATTCAAAAAAGGTTTTCTATACC
AGCCAAGACAGCTCGTTTTGCCGTGAtgtttgaaatatctttagcgctat
tttttcaccaaatatTTTTTCCGCTAAAGCCTTTCAAAAACGTCAATTTC
TCTTTATCATGCTCACGATGAAGTTTTTAATCTTTGAAAGGAGCTTCATT
CTGATAAGCAAGATTCTTATCAATAGTTTATTGCAAACCTCTTTCTTACT
AAGTAAattcaattttcctagaaaccaAAAGTGATTCTTTTTCAGAGCGT
GACAAGAAATTGAAAACCCTCATAATACTGTTTTCTGTTAGCAGCAATGC
AAATTCCTTAAATTACTCTCAGACATTACTGTGGGGTCGAATGACTCAAC
GAATGACTGGAATTCtaacattattttttcttcttgtatttttttagtCG
CTGTACAGAACTGTGCCAGGCGTAGGGATGTATTTCTGTACACTACACAC
AATGAAAAGTGTTTTAGAGTAAGTAATAGTAATATGTCCATTCTTATTCA
TTACTGTTAAGTTATGTAAGTCACTCAaagatgtatttttttataagaat
tttgaaCTACAGTCAATATCTAATCTGTTGTAATCTGTTTTTACATAATA
GTGACTTTGCAAGTGAAGGACTGTTTCATTCAACACGCTTTGGGGATTTC
ATTTGAATTCTTACTATAAAAATACTTGGTCACGCATACATTGTAATAAA
AGAAACCTCGTTTATagcgagaaaaaaaagtttaaattctCATGCTGAAA
ATgtcattaaaaattatttaaaaaagcaTAACAACCCTCAGATATGCCTC
TCGCCAAACCGGTTTGACCACATTACAATGTCATCTTTACTATTTCAAAA
AAACGAAACGAAATTTCATAATGATATTTTAATCGCCTTACTATTAAGCA
ACTAATTTTCTCAAGGGGTCTATgagtaattaactttttttgaatatctA
ATGGTCTGACAGCCAGCCCTTCCGTTGCAAAGTCACCATTATGTAAAAAC
AAATCACAACAGATTAGATTGAATATTTCGAGGCCTTAGTTACCTATGAA
AGGATAATACCTTTCCGTAAACAACCCTAGTGCAaaaccttatcggggaa
aacttcgtcggggaaaagtgacgaaattttggacaagtgacgaatatttt
ccccgacgaaaattttccccggccttaatgcgtttaccaactaccggcaa
gtgacgaatttttccccgataaggtagtaacTAAAAACTGACTAAGTTCA
AAACGTTTTGTCAAACTCTCATGCAAGTTTTTGTGACTTATAAACATTCA
CATTGAAGCAAAACAAAAACTGTTAGGCTAAGAAACCTTCTCTTTCGAGT
GTGTTGTACTAAGCATTGGTCTAAGATAAATACACTTGAGAGTTTGTCTT
AGCCTAACCATGAAAGAATCTGTTTATTTAATCTCAAcgtttttcttctt
attttacAGTGAAGAACCAACCTTCTATCAGAACTTAATGCTTGGATTCA
CAGCTCGCGCATGCGTAGGAACAGCTGTTTTACCTATGACCGTCGTCAAA
GCACGCTATGAggtaattattgattgattgattgattgattgattgattg
attgattgattgattgattgattgattgattgattgattgattgattgat
tgattgattgatggaTTGATGACGTAGCCTAAGATTTTGTCTAGTTTTTT
TTCCAAGAGATAATTTGAAACATTTACATTCTCATGAAGCTTACAGTGTG
TTCTTACAAAGTTCTTCTCTCCTTCTTTTTCAGAGCGGAAAATACAAATA
CAAAACCGTATCTGACGGATTACGTACCATCTGGCGTGCAGAAGGACTCC
GTGGTCTATTCAGCGGATGTACAGCAACTATTTTACGGGATGCACCGTAT
TCCGGAATCTACCTCATGTTTTACTCACAAGGAAAGAAAACTATGAAAGg
taaatgattattttttgacATGATTGGGAGGTTGGGGAGTTTGAAGTACA
GTATCTTATCTTCTGTTTAAATTCTATGTGTTAGGTGAAAGTGAAACGAG
CAGCACTTATATAAACAATAATATCAGCTTCATAcccatttcaacaattt
ttgaaacGCTAGCGGACACTATCCAAGAAAAAATTGTCTccttttttgtt
gcttttactCATCCTTCTTTTCTCTTTTATCCACAGATTTCGCGTCTATC
GATGAAAAAGATACAAAAGTTCATTTCATCTGCGGTATAAACGCGGGATT
GATGGCATCATTGGTCACACATCCTTTCGACGTCATCAAAACACAAATGC
AACTCTACCCAGAAAAATACCGCGGTACTCAACACTGTATCAAAGTGATT
TTCTCACAATATGGATTTGCTGGTTTTATGCGTGGACTCACGCCCCGCTG
CGTGCGTAGGACACTGATCTCTGCTTTATCTTGGACCGTTTTTGAGGAGA
TTATGAAACGACTAAAATTAAGgatctaaaaaaaaagaaaaatatatatt
ttcttaaaaaccttttttttgataTGACAAAATGATGTAAATATATGTAA
ATaaattttagttatttttgcaaaaagagaTATATTCAGAAATTTATGGC
TTATATATTAATACTAtttcacaaaacaaaatacaattactattattttt
ttttacattgtCGCTATGAATGTTATAAATAGAATTTATTATTGTTGTAG
CCCTGTAAAATTAGGTCGTTTAAAAGTATCTTTAGCGTTTTGACTTAATC
TACTAAAGATAAGTTTTTTTTGCTGTGGAAAAGCGTTTTCGTagtaaaat
gaaaatgttttcaaaaaggaGACTTAACCAATGATCTGGTCAGATATTTG
GCTCTCGTTTTTTCCCTTGTGTATTATTAAACatgtaaaattatgaaata
tataaaattaagaagaattATTTTCACAAAATGTAAATAGGTTGATGTaa
ataacaataaaatgtaTGATAGATAGAACTCGTTAGAGAAGAAATATGAT
TTGTATTAGATTGAAACA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_002178XLOC_002178Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00003877-exon-sc0000038-1491911889:316167..316328TCONS_00003877-exon-sc0000038-1491911889:316167..316328Clytia hemisphaericaexon
TCONS_00003877-exon-sc0000038-1510915933:316167..316328TCONS_00003877-exon-sc0000038-1510915933:316167..316328Clytia hemisphaericaexon
TCONS_00003877-exon-sc0000038-1575043694:316167..316328TCONS_00003877-exon-sc0000038-1575043694:316167..316328Clytia hemisphaericaexon
TCONS_00003877-exon-sc0000038-1491911889:325757..325929TCONS_00003877-exon-sc0000038-1491911889:325757..325929Clytia hemisphaericaexon
TCONS_00003877-exon-sc0000038-1510915933:325757..325929TCONS_00003877-exon-sc0000038-1510915933:325757..325929Clytia hemisphaericaexon
TCONS_00003877-exon-sc0000038-1575043694:325757..325929TCONS_00003877-exon-sc0000038-1575043694:325757..325929Clytia hemisphaericaexon
TCONS_00003877-exon-sc0000038-1491911889:326349..326427TCONS_00003877-exon-sc0000038-1491911889:326349..326427Clytia hemisphaericaexon
TCONS_00003877-exon-sc0000038-1510915933:326349..326427TCONS_00003877-exon-sc0000038-1510915933:326349..326427Clytia hemisphaericaexon
TCONS_00003877-exon-sc0000038-1575043694:326349..326427TCONS_00003877-exon-sc0000038-1575043694:326349..326427Clytia hemisphaericaexon
TCONS_00003877-exon-sc0000038-1491911889:326914..326984TCONS_00003877-exon-sc0000038-1491911889:326914..326984Clytia hemisphaericaexon
TCONS_00003877-exon-sc0000038-1510915933:326914..326984TCONS_00003877-exon-sc0000038-1510915933:326914..326984Clytia hemisphaericaexon
TCONS_00003877-exon-sc0000038-1575043694:326914..326984TCONS_00003877-exon-sc0000038-1575043694:326914..326984Clytia hemisphaericaexon
TCONS_00003877-exon-sc0000038-1491911889:327976..328078TCONS_00003877-exon-sc0000038-1491911889:327976..328078Clytia hemisphaericaexon
TCONS_00003877-exon-sc0000038-1510915933:327976..328078TCONS_00003877-exon-sc0000038-1510915933:327976..328078Clytia hemisphaericaexon
TCONS_00003877-exon-sc0000038-1575043694:327976..328078TCONS_00003877-exon-sc0000038-1575043694:327976..328078Clytia hemisphaericaexon
TCONS_00003877-exon-sc0000038-1491911889:328300..328465TCONS_00003877-exon-sc0000038-1491911889:328300..328465Clytia hemisphaericaexon
TCONS_00003877-exon-sc0000038-1510915933:328300..328465TCONS_00003877-exon-sc0000038-1510915933:328300..328465Clytia hemisphaericaexon
TCONS_00003877-exon-sc0000038-1575043694:328300..328465TCONS_00003877-exon-sc0000038-1575043694:328300..328465Clytia hemisphaericaexon
TCONS_00003877-exon-sc0000038-1491911889:328703..329534TCONS_00003877-exon-sc0000038-1491911889:328703..329534Clytia hemisphaericaexon
TCONS_00003877-exon-sc0000038-1510915933:328703..329534TCONS_00003877-exon-sc0000038-1510915933:328703..329534Clytia hemisphaericaexon
TCONS_00003877-exon-sc0000038-1575043694:328703..329534TCONS_00003877-exon-sc0000038-1575043694:328703..329534Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000038supercontigsc0000038:316167..329534 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0	0	0	0.847216	2.01656	0.00365073	1.22072e-05	0.465492	0.255845	0	0	0	0	0	0.17872	0	0.586524	0	0.610439	31.9905	27.6187	1.09228	0.453448	0.00308656	4.9091	0	1.41085	0	0
Blast
[Close]
BLAST of TCONS_00003877 vs. Swiss-Prot (Human)
Match: S2538 (Solute carrier family 25 member 38 OS=Homo sapiens GN=SLC25A38 PE=1 SV=1)

HSP 1 Score: 253.832 bits (647), Expect = 3.763e-79
Identity = 130/274 (47.45%), Postives = 183/274 (66.79%), Query Frame = 1 
Query:  220 FLFQPLDLIKTKLQAQVSTATSLQQAIVDGRLAPKHNYSQSSVASLLTQVVREDKVLGLWKGLTPSLYRTVPGVGMYFCTLHTMKSVL--DEEPTFYQNLMLGFTARACVGTAVLPMTVVKARYESGKYKYKTVSDGLRTIWRAEGLRGLFSGCTATILRDAPYSGIYLMFYSQGKKTMKDFASIDEKDTKV----HFICGINAGLMASLVTHPFDVIKTQMQLYPEKYRGTQHCIKVIFSQYGFAGFMRGLTPRCVRRTLISALSWTVFEEIM 1023
             LFQPLDL+KT+LQ       +LQ +         H   +  + ++L +VVR + +LGLWKG++PS+ R VPGVG+YF TL+++K        PT  +++MLG  +R+  G  + P+TV+K RYESGKY Y+++   LR+I+ +EG RGLFSG TAT+LRDAP+SGIYLMFY+Q K  +      D+ D  +    +F CGI AG++ASLVT P DVIKT MQLYP K++     + +IF  YG  GF +G  PR +RRTL++A++WTV+EE+M
Sbjct:   43 LLFQPLDLLKTRLQ-------TLQPS--------DHGSRRVGMLAVLLKVVRTESLLGLWKGMSPSIVRCVPGVGIYFGTLYSLKQYFLRGHPPTALESVMLGVGSRSVAGVCMSPITVIKTRYESGKYGYESIYAALRSIYHSEGHRGLFSGLTATLLRDAPFSGIYLMFYNQTKNIVPH----DQVDATLIPITNFSCGIFAGILASLVTQPADVIKTHMQLYPLKFQWIGQAVTLIFKDYGLRGFFQGGIPRALRRTLMAAMAWTVYEEMM 297
The following BLAST results are available for this feature:
BLAST of TCONS_00003877 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
S25383.763e-7947.45Solute carrier family 25 member 38 OS=Homo sapiens... [more]
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