TCONS_00003849 (transcript) - C. hemisphaerica

Overview
NameTCONS_00003849
Unique NameTCONS_00003849
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length153

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00003849 ID=TCONS_00003849|Name=TCONS_00003849|organism=Clytia hemisphaerica|type=transcript|length=153bp
TGAGCATTTCTCACACAATTCTACTAACAAATATCTGCTTTTTATACATA
TCTAGCAAATTCTACAATAATTACAAAACACATTAAAATCCGGAAGAAGA
TAGATAGAAGATAGTTACAGAACATTGAAGCGATAAAAGACAATTAACTA
TGT
Run BLAST on NCBI

transcript from alignment at sc0000031:673650..673802

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00003849 ID=TCONS_00003849|Name=TCONS_00003849|organism=Clytia hemisphaerica|type=transcript|length=153bp|location=Sequence derived from alignment at sc0000031:673650..673802 (Clytia hemisphaerica)
ACATAGTTAATTGTCTTTTATCGCTTCAATGTTCTGTAACTATCTTCTAT
CTATCTTCTTCCGGATTTTAATGTGTTTTGTAATTATTGTAGAATTTGCT
AGATATGTATAAAAAGCAGATATTTGTTAGTAGAATTGTGTGAGAAATGC
TCA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_002158XLOC_002158Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00003849-exon-sc0000031-1491911889:673650..673802TCONS_00003849-exon-sc0000031-1491911889:673650..673802Clytia hemisphaericaexon
TCONS_00003849-exon-sc0000031-1510915933:673650..673802TCONS_00003849-exon-sc0000031-1510915933:673650..673802Clytia hemisphaericaexon
TCONS_00003849-exon-sc0000031-1575043694:673650..673802TCONS_00003849-exon-sc0000031-1575043694:673650..673802Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000031supercontigsc0000031:673650..673802 .
Expression
No biomaterial libraries express this feature.
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00003849 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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