TCONS_00003848 (transcript) - C. hemisphaerica

Overview
NameTCONS_00003848
Unique NameTCONS_00003848
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length142

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00003848 ID=TCONS_00003848|Name=TCONS_00003848|organism=Clytia hemisphaerica|type=transcript|length=142bp
CTATAATGCCTCTCTTGACGTCGTCATCCAGACTCTTCTTGACTGCTTCC
TTAAGGTGGAAAGGCACTGGGATGGGGTTATGACGAACATGCGGCTTCGC
ATTAGGTTGAATATGGATGTGGGCAGGTTTTGTATCCATGGA
Run BLAST on NCBI

transcript from alignment at sc0000031:665988..666129

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00003848 ID=TCONS_00003848|Name=TCONS_00003848|organism=Clytia hemisphaerica|type=transcript|length=142bp|location=Sequence derived from alignment at sc0000031:665988..666129 (Clytia hemisphaerica)
TCCATGGATACAAAACCTGCCCACATCCATATTCAACCTAATGCGAAGCC
GCATGTTCGTCATAACCCCATCCCAGTGCCTTTCCACCTTAAGGAAGCAG
TCAAGAAGAGTCTGGATGACGACGTCAAGAGAGGCATTATAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_002157XLOC_002157Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00003848-exon-sc0000031-1491911889:665988..666129TCONS_00003848-exon-sc0000031-1491911889:665988..666129Clytia hemisphaericaexon
TCONS_00003848-exon-sc0000031-1510915933:665988..666129TCONS_00003848-exon-sc0000031-1510915933:665988..666129Clytia hemisphaericaexon
TCONS_00003848-exon-sc0000031-1575043694:665988..666129TCONS_00003848-exon-sc0000031-1575043694:665988..666129Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000031supercontigsc0000031:665988..666129 .
Expression
No biomaterial libraries express this feature.
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00003848 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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