TCONS_00003831 (transcript) - C. hemisphaerica

Overview
NameTCONS_00003831
Unique NameTCONS_00003831
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length162

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00003831 ID=TCONS_00003831|Name=TCONS_00003831|organism=Clytia hemisphaerica|type=transcript|length=162bp
AACTAAACCCTGACGCTCACGGTAGAAGTTAATCCTTTTAGAGGTGTGAT
TCCCAAACTATTTGATCTTCCAATAAGAAAAGTTTACAAATCTATACCCA
GATCCAAttgcaccactttttgattttactaaaATGGTGATACAATTGTG
AGCGCTATCgaa
Run BLAST on NCBI

transcript from alignment at sc0000031:71894..72055

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00003831 ID=TCONS_00003831|Name=TCONS_00003831|organism=Clytia hemisphaerica|type=transcript|length=162bp|location=Sequence derived from alignment at sc0000031:71894..72055 (Clytia hemisphaerica)
ttcGATAGCGCTCACAATTGTATCACCATtttagtaaaatcaaaaagtgg
tgcaaTTGGATCTGGGTATAGATTTGTAAACTTTTCTTATTGGAAGATCA
AATAGTTTGGGAATCACACCTCTAAAAGGATTAACTTCTACCGTGAGCGT
CAGGGTTTAGTT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_002140XLOC_002140Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00003831-exon-sc0000031-1491911889:71894..72055TCONS_00003831-exon-sc0000031-1491911889:71894..72055Clytia hemisphaericaexon
TCONS_00003831-exon-sc0000031-1510915933:71894..72055TCONS_00003831-exon-sc0000031-1510915933:71894..72055Clytia hemisphaericaexon
TCONS_00003831-exon-sc0000031-1575043694:71894..72055TCONS_00003831-exon-sc0000031-1575043694:71894..72055Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000031supercontigsc0000031:71894..72055 .
Expression
No biomaterial libraries express this feature.
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00003831 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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