TCONS_00003826 (transcript) - C. hemisphaerica

Overview
NameTCONS_00003826
Unique NameTCONS_00003826
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length102

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00003826 ID=TCONS_00003826|Name=TCONS_00003826|organism=Clytia hemisphaerica|type=transcript|length=102bp
AAACCACCATATTATACCATccacaaataaaaagttacttaaaaatgGAT
CTCCTTCTTTACAGATTTAGATTTCCAGTGCATAACATCTGTTACATTAG
TA
Run BLAST on NCBI

transcript from alignment at sc0000031:9158..9259

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00003826 ID=TCONS_00003826|Name=TCONS_00003826|organism=Clytia hemisphaerica|type=transcript|length=102bp|location=Sequence derived from alignment at sc0000031:9158..9259 (Clytia hemisphaerica)
TACTAATGTAACAGATGTTATGCACTGGAAATCTAAATCTGTAAAGAAGG
AGATCcatttttaagtaactttttatttgtggATGGTATAATATGGTGGT
TT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_002135XLOC_002135Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00003826-exon-sc0000031-1491911889:9158..9259TCONS_00003826-exon-sc0000031-1491911889:9158..9259Clytia hemisphaericaexon
TCONS_00003826-exon-sc0000031-1510915933:9158..9259TCONS_00003826-exon-sc0000031-1510915933:9158..9259Clytia hemisphaericaexon
TCONS_00003826-exon-sc0000031-1575043694:9158..9259TCONS_00003826-exon-sc0000031-1575043694:9158..9259Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000031supercontigsc0000031:9158..9259 .
Expression
No biomaterial libraries express this feature.
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00003826 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
back to top