TCONS_00003823 (transcript) - C. hemisphaerica

Overview
NameTCONS_00003823
Unique NameTCONS_00003823
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length3592

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00003823 ID=TCONS_00003823|Name=TCONS_00003823|organism=Clytia hemisphaerica|type=transcript|length=3592bp
GATCTATTTTCAAATACACcaaaaaattattctttaaGAACAATACTGAA
GATGAGCCCATTGTTTCTTTTGTTCgctaaacaaagaaaatcttATTGAT
AAAAACAAATAGTATggaattcaaaatggtagacttgttGCGACAACAGG
AAAAGAAAGTTGTAAGGAGGTTGGAACGCTTTATCATAGTGTAAACAGCT
TCtcaaataacaaacaaacaatttCTTACGAATGGACACTCATAAATATG
ATGATGCATGAAAAGATATCACTCATGGTTATATCTTTGTTGAGTGGAGA
GTTTAACATATGAGAGGAAGGATCGATCAAAAATGAGAtgcaaaatgaat
tttatgtttttggtaACTTTCATTGTTGTTTCATTCAATAAGCATGTTTG
GTCGTTGAAAGTGAATGTCCATCCACGATTGGCATTTCCAGTCAATGGTT
CATCCTTTGAAGTTTCATGTGAGGTTGACGGAAGCAAAGAACAGAAGCAA
CATGACATCAAATTTGTCAATACGAATAATCAAGAATACACAAATACATC
TTCCAGATCCATCATTCGTGAAAAAATGCAAAATGCTTTTGAGACGCGAT
CGAGGGTAGTTTGGAGTGagattgatactacaaatgatGAGCATGGGAGC
TGTGAAGTCGATGATACTCTCTACTCGTTCAATATTTTCGTCATCCCAAA
GGAAGGTAAACCTCGGATGTCAGTCAGTCCACGCAAACCAGTGCCTGGTG
TTCAAGGCGGAGATATATCATTTGAATGCCATGCTGCTACTGACATattt
gaaaacatcaaaaacttAACAATCTCCTGGAAGAAAGGAAATGCATCAAA
CATGGAAGACTTATCAGACAACCAAACAAAGATTGAGACACGTCAAGAGA
CTAGAGGCCGATCACTTCTCTTATCATCACGCTTAACCATACATGATTTA
CAAGTGGACAATGTTGGTTCGTATTTTTGTGTAGCTGATCTCCACGTTGC
TACGAAACGAGGAAATAAAGTgaattcaagaaatatttttcatgaagaAA
TAAAACTAATTAAAGTTACGAGCAAGAAGAATGGAGGTGGGTCGAGCAAC
GCTCAAAGTAATGCACCAAGTTTCTACCTGTTTGTTTTGGTCCTCATCGT
GAGGGTATTCTTACAGAGATAAATACTTATCATATTTTTTATAGacgatt
tttcatattttaatatattttttgattttataaattttgtaaattttact
tAATATACTTTTACTCTATAATATTTTACCATACAAAAATATAACTGAAA
AGGACCATACGCAGCTACAGGTACAGATTATAGTTTGTAAATTCACTCAC
TGGTCGAGAATTTTATCTAACTTAAACTGCGCCAGGTCTGAATATTTACA
GTGTTGATATTCCTTaggaataaaaaaagtaaatgttGAGCCTCTCTAAG
ATCTATGTTCGACGTTACTAGAAAAGGGAAGCAACGACACCCTTCCTAAG
ATTGCGTTTATACTAACTACGCGTTAAAAGAAAAACtcattttttaaaga
ctttttcacAGCCCCAGCATCAAAAATCGATAACTTTTAACTCAAACTTT
TTCTTGAAAGGCTGTAGTATCTGATCTCtcaaattaaagaaattgttttC
AAACTATCTACACTTCTTTAACCAGGACAGCGATCGGTCGAATCATTCTG
TCATTTTCTGTAACATAAACGTTTCTTCCATCATAATGAACTTTCGTTTT
TGACATATCCAGTCTATTCATAAACATGGCTTTGATTCTTTTCCCATTAT
AATTAAATGTTTCTGCGAAACTTTCAGCTGTTTCCCAATTTGGTGATGAA
TAGATTCCTTCCCCATACTGTTGTCGTTCGCTACAACTGACGTCGTATCC
CCCAGCAATGATCTTTTCAATCGTCTTATGATCTTTTGGACCATGGTATG
AAATAGCCCATTCCCCAGGCAATGAACACTTCTCATTTACCCTTTCGCCT
GGTCCAAACCAAACGTCGTTGACATATTTTCCTTTGATGTTCAGGGCGTA
TTTATTCCAACCATTTGGGCGGTTGAAGACATAACCACCTCTGGTGAATC
CCGTTTCTTTGTCTTTGCCATATTGATGGTCGTACCTGGAGTCAGTAGCG
CTTTCTGGAATGAAATCTAGACGTTCTAGATTAACCATTTTCACCTCTTC
AAAATctgtattttttttcgaccTGTGTATATAAACCTTCTTATCCAGAT
AAATCTCCAACAGCAAAAGGTCTTTGTGAAGCCAAATGAGGTTTAAATAC
CACCTAATTTTAAAGGGAATTTCTATATAGCCTGGTGATGTAATGTTACA
AAGCAAGAGAAACAATTTGATTGGATTAAAATAACTTTCATAAACAAACA
CGAAAACAACCGTAAAAATTTGTTTGTTACAAATTACCCTCACAAGTATT
GTACATTCAGTGAATACTGATTGGCTCTCACAAAACATTACGTCAGCGTA
ACTTCCCCTGAATTGGAAAGAGCCTTTTACATTTCTCAGAATTGTATTCA
TAAATATGCTGATGtttacaataacattatgaAGTCCTTTTGGAAATTCC
CCGAAGGGATTGAAGGGGAATTCCTTGTAGAATTCGAtcgtcttttttga
aaataaaatctacatAGTAATAAAGCTATCCAACTGTTTACGTTATTTTT
CAGAGAAATTAGACTCGTGTAGAGTAAGGAAAGAGAACAGAAAGAGAAAT
TCAACCAAACTGCTTTTAAAAATCCAAGAATGTGGCAGAGAAGCATGGGT
GTTGGTTTCAGTAGAAATGAGAGTCCAACTTCGATGTATGGAGGTAAGGG
AGATTCAGGTCAAAGAAATGAAAACGAAGATTTGAGTGAAGCAAAAAGAC
TTCTCCGGGCAGCTGATCACCAATTTTGTAATGGGAAACTGTTTGACATT
CATAGAAAttcaactttcgttttcaaccaatTTGCTCACCAAAGTCAAAA
CCAAAAACGATACGAACATTTAGGAAAGATCATCGAGAAGTATGTTTATG
GTTTACTGCAAGACAAATCGAACACTGGTCTGCAGTTGGTTAAAAGATAT
CTACCACTTTCCAGTTCATTGGGTCTATCAAACGATTTCATTTTCCATAC
AAAAGACATTGAGAGATATGAAAAGATCTTGATTTTAATGCATGGTAGTG
GTGTAGTCAGAGCTGGCCAATGGTCAAGGAAATTGATCATGAATGTATCT
GTAGACGCAGGTTCAATGTTACCGTATGTTAGGAAAGCTCACCAATATGG
TTACGGTGTTGTGGTGGTGAATATCAATCAACCATATGATCACCGTTCGT
CGGTAATtacattttcttttgtattgATTACATGAAACTTGCTCCTaaaa
catccccttctcacagacccgatggAACCCTTCCCATTGCAAAAATTGGC
Taacgtccccagtggaaaattaaactcccatttttgtccccactgaaaat
aatctaataaaccaatcctcactgcaaaatattttgctatttcTCCCGTC
CCCACTGACTTTTGTGACTTGAAAgcaaaagaattaaaatgc
Run BLAST on NCBI

transcript from alignment at sc0000031:867778..877776-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00003823 ID=TCONS_00003823|Name=TCONS_00003823|organism=Clytia hemisphaerica|type=transcript|length=9999bp|location=Sequence derived from alignment at sc0000031:867778..877776- (Clytia hemisphaerica)
GATCTATTTTCAAATACACCAAAAAATTATTCTTTAAGAACAATACTGAA
GATGAGCCCATTGTTTCTTTTGTTCGCTAAACAAAGAAAATCTTATTGAT
AAAAACAAATAGTATGGAATTCAAAATGGTAGACTTGTTGCGACAACAGG
AAAAGAAAGTTGTAAGGAGGTTGGAACGCTTTATCATAGTGTAAACAGCT
TCTCAAATAACAAACAAACAATTTCTTACGAATGGACACTCATAAATATG
ATGATGCATGAAAAGATATCACTCATGGTTATATCTTTGTTGAGTGGAGA
GTTTAACATATGAGAGGAAGGATCGATCAAAAATGAGATGCAAAATGAAT
TTTATGTTTTTGGTAACTTTCATTGTTGTTTCATTCAATAAGCATGGTAA
GTCCGTTAAAGTTTTGATTATACACGTTTTTTTTAAGAACATAGGCTTCG
ATGGCCAAAATGTTAAGAACAAGTGAAAAACATTTTAAGGCTTTGCGGAC
TCTAGTGGGGTCGTTTAGCATAATTTACGGGAAAACAATAAGATCTAGCT
GAAACTTTCTCCAGACCTTCTCTATAGGATGGTTATGCCTTAGGAAAAAT
TCCCCTAAAATCCCACTGGTGGAACATCCCTTTTTTGGGACATTTCTTTT
TTCCCCAGGCAAAACCCTAAGGGCGAAATTTTTTCGCCCTTAGGATTTTG
CCTAGGGAAAATAGAAATGACCCAAAATCATATAATTGGTTGTTTTTTCA
TTCAAAAAACATTATTAATAGCAATGCCCACCATCAAGCCATGTTTCAAT
TTTCAATAAAATTGATTTTTGAAGCTGGAACTACCGTATTTAAAAATCGC
CGGAACAACCTATTTTCGCCGGAAAGACAGTATTTCAGTATGTCTCGAGC
TGTACTTTATATATTTTTTATGAAATTCTGCACACTTTTTTTTATAAGAA
CATCCCAAATTTTTGAAGCCTTCGTTTGGATGTTCTTAACTTTTTGAGTT
TTAAGCCTAAAAATGTTCCTAACATGTTCTTATTTTGACCATTTTGTGAG
TAATTTTGTCCATTTTCCTAAGAAATTGGGTGTTTTTGAGTCCACAAAGC
CTCAAAATGTCCTTAACTTGTTTTTAGCATTTTGGCCATTGAAGCCTTAT
GATCTTGAATAGTTTGTTCTTATAAAAAAACGTGTATTCTTATAAAAACA
CACATTTTCTTTACATTCTAGTTTGGTCGTTGAAAGTGAATGTCCATCCA
CGATTGGCATTTCCAGTCAATGGTTCATCCTTTGAAGTTTCATGTGAGGT
TGACGGAAGCAAAGAACAGAAGCAACATGACATCAAATTTGTCAATACGA
ATAATCAAGAATACACAAATACATCTTCCAGATCCATCATTCGTGAAAAA
ATGCAAAGTAAATTACATGCTTTTTTTTATAAGTATAACGTTTATAAGCA
TATGAAGGCTAAGTTTTTGGTACCTAAACAATATTGCTCTATTTTGTCGG
GGAGCAGAATCCAAAAATAGCATTTTTTTAACCCAAGAGAAGAATGGGGT
TGTTATATATTGCTGGAACGGAAAGTTTTATGCTGATTATGGAAACCCAG
GTCGTAAAAAGGCTTGAGTTTGCAATCCTCTGTGGTGTTTTTTCAATTTT
ACTTGTGTTAGAAAAATGCTGATTGTCAGCAAAGTAAAGGGTTTTAGAAT
TCCATTTTTTAAAGAATAGACGATATCAGCTTTCCGAATTCTCCCCGAAT
GATTACCCATGATGCATTGCGCAAAAAAATTCACGGAAAGTCGATATCGT
CCGTGAATTTTTTTGCGCAGTGCATCGCGGGTAATCATTCGGGGAGAATT
CGGAAAGCTGATATCGTCTATTCTTTAAAAAATTTTTAACCAAATTTTAA
TTTATAAAGTATTCATTTGAGTTAGGCTCTACTAGGCTAAAGGATTTAAA
AAATCAAAAATTGATCTCCTTCGTTAAGGTTTTTTGACCAAAACTCAGTC
TTTTATTCGAAAAATATTTACAAAAGCAAAGGTTTTTATGAGTAAAATCA
CAAGTAAAAAAACCATTAAATGTTTTTAACTAAGAAATGTAGGTAAGAAA
GTATAGCGTTTTCAGCGCTTTCAAGATTTTTTTATATTTATGTATTTAGA
AATTTACCTTGGAATACAGATATTCAGTCGCAACTTACCATGATCGATCA
GATTTATCCTAGTGACTGAATCAGGATCAAAATTCCATTCACTATATCAA
GTGTGCACTGATTGAACAATGAGTAATTACAACATTGACAATATTTCTAA
GTAGTACTAATTACTGCTATGAGGCAAATTTTGAAAATGAAAAATGAAAA
TGAATATTTCACATTACAACAAATATTTCAGAATCTTTAGAAACGTTAAT
AAATTGTTTATGTACCATTTTACTTTGAATTAAGCCCCCCGAATAAACGC
CTTTCCTGAAATCCAAAAAATTCAATAAAGGTCTGGGCGTTTATATGAAG
TGATCCGGGTAACACTGCAATAAATAACGATAATCAAAACTGATACTTAT
ATACTTATGCTCTCTACTTCAGATGCTTTTGAGACGCGATCGAGGGTAGT
TTGGAGTGAGATTGATACTACAAATGATGAGCATGGGAGCTGTGAAGTCG
ATGATACTCTCTACTCGTTCAATATTTTCGTCATCCCAAGTAAGTTCGAA
CTATCTTAACTTTTTTTGAAAAACAAACAGAAAAACTATGGCCAATTTTT
ATGTTTTTATTCTAGCTTCATGGGTTTTATATACCATTGTTTTGGTATTT
TTATATAATTTCAAGTTTGCGATATCCTCTTTTCTACTTCACTGGGCTGA
GCTCCATCAAAATCATCAGAAAGCAAAGTTCAGTTAGAAGTAGCTCTATC
TACTTTAGGCGTACAAACTTTCGCGAGTAGAAACTTTCGTGAGGTCGAAG
AATCGCGAAATCTACGACATTTACTTTCACGAATTTGACAAAAAAAAAAA
TTTCCGCCAGCATAAACTTTCGCGAATGAGGTAGATTTTTAGTCGAGAAT
TCAAGTTTTCGGTGCATAAAACCAGTGTTTTGATCACTCAAATGTATTCA
AACCACAATTGATAGACTTTGGCATAATATCTATACTAAATTTTATCCTT
GTTATCATCAAAGAGGAAAATTTGAGTAAATTTCCTTTTCAGATTTTTTT
TCGCGAGCAGAAACTTTCGCGAATTACCCTCTCGAGAATTTTCAAAGACA
TTTACTCTCGCGAAAATCGCGAAAGTTTCTGCTCGCAAAAGTTTGTACGC
CTGAAGTAGTCTACATTGTGTTCTACAAACTGATTTTATTTTTCAAACTT
TAACAACAGAGGAAGGTAAACCTCGGATGTCAGTCAGTCCACGCAAACCA
GTGCCTGGTGTTCAAGGCGGAGATATATCATTTGAATGCCATGCTGCTAC
TGACATATTTGAAAACATCAAAAACTTAACAATCTCCTGGAAGAAAGGAA
ATGCATCAAACATGGAAGACTTATCAGACAACCAAACAAAGATTGAGACA
CGTCAAGAGACTAGAGGCCGATCACTTCTCTTATCATCACGCTTAACCAT
ACATGATTTACAAGTGGACAATGTTGGTTCGTATTTTTGTGTAGCTGATC
TCCACGTTGCTACGAAACGAGGAAATAAAGTGAATTCAAGAAATATTTTT
CATGAAGAAATAAAACTAATTAAAGGTATTATTCCTATGGCGCGTGGAAG
CGCCAGTAAATACTATCTTGTTTGATTTTTTTTTTAATGAAAGTATCTCA
GTTGAAGCAATGCGGAGGAGAGTGAAATTTGCCTCAGTTATCCAAAGAAA
CTAAAAAGGGGTGGGAGAAAGAAGCAACACAAAAATGCAGCGCAGGGTAT
CCTTACACAACAAATTGGCAGACCAGAAAGCAGGTCATGAGATAGACCAT
TTAAGATTATTAATGAAAGACAAGTTGCTGGTCATTGGTCTAAAATGGAG
AGAAACTGCTAACTTTAGTCCTTGTGACCTACATTGATAGTTTTCTCGCT
TTTCCGTGCAAGCATGTAACTAAACGCGTATGCGCATATGATAAAACTTG
CTAGTAATCGAGACAATGTACTTTTTTCTTATAGTTGCATTTGAAATATG
ATAGTTTCTTTTTAAACAACATAAGCAGTTTGGTTTTAAACAAGATATCA
TTTATTGGCGCTTCCGCGCGCCATATATTTCAATGTTTACGCGCGCCATA
TATTTTAATGTTTATAAGTGAGAACCGTCTGATCCTTTGAAATTCTGCTT
AACTTGCAAAAACGTTGGCTGCAGAAACCAAGAAATTCACTGACGGCCGG
GGAAAATCCCAAATGAACATGTCTGTGATGAATTAACTGAAAGAATGAGT
CATTTCTAGAGGAAGGTGTTTTGTCGTATCCCAAATAGGCTGGAAGGTCC
GAGCAAGAAGGGAGGGGTGCAAATACTTTTTTATAAACGATAGTAATTTT
ATGAGACTTTTTGGCACTTTGAGCCTTAAGTTTTATTTTATCTTGTTTGT
AGGGCAAGACAAGCATTTTAGGTTCAAGACCCTATTTTTGATACTTTTAA
TAACTATAATTTGGTTAAAATTCAGTCATTCCAGATTCAGTATTGTTCTT
ATTTTTAGCATTTTTTTGAGCCTCATTATTTAGATTTCTAGAGAGTTGAG
ATGAGAGTTCAACATTTTGAAAAAGTTAGTTGTACTTTTGTAAAATAGAT
TCTGTATTGGCGTTTTCTTCGTTTAGCACCTCGTATGCGAATTAATGTTT
TGAAAATAAATTAGCATGTTTGGGGGTTTGATAGGAGCAAGGGTTTGGGT
TTTTTTTTGTCAAATAGTTACTAGTTCGGAGCACTTATATGTCTAAATAT
CATTTTAAGAGTGGACCATGTAAATAAATCAGGATAAATCAAACATGTAA
AAAGCAAAAGATTATGTGAACCAAAAATCACCGTTACGTTAAAGGTTTCA
TTTCAAAATTCTAGAAATATATCTAATCCGATGTCTCAAAATCCTTGATT
TTCAACTAAATATTTCACTTCTACTTTCCTTGTTGTTACAGTTACGAGCA
AGAAGAATGGAGGTGGGTCGAGCAACGCTCAAAGTAATGCACCAAGTTTC
TACCTGTTTGTTTTGGTCCTCATCGTGAGGGTATTCTTACAGAGATAAAT
ACTTATCATATTTTTTATAGACGATTTTTCATATTTTAATATATTTTTTG
ATTTTATAAATTTTGTAAATTTTACTTAATATACTTTTACTCTATAATAT
TTTACCATACAAAAATATAACTGAAAAGGACCATACGCAGCTACAGGTAC
AGATTATAGTTTGTAAATTCACTCACTGGTCGAGAATTTTATCTAACTTA
AACTGCGCCAGGTCTGAATATTTACAGTGTTGATATTCCTTAGGAATAAA
AAAAGTAAATGTTGAGCCTCTCTAAGATCTATGTTCGACGTTACTAGAAA
AGGGAAGCAACGACACCCTTCCTAAGATTGCGTTTATACTAACTACGCGT
TAAAAGAAAAACTCATTTTTTAAAGACTTTTTCACAGCCCCAGCATCAAA
AATCGATAACTTTTAACTCAAACTTTTTCTTGAAAGGCTGTAGTATCTGA
TCTCTCAAATTAAAGAAATTGTTTTCAAACTATCTACACTTCTTTAACCA
GGACAGCGATCGGTCGAATCATTCTGTCATTTTCTGTAACATAAACGTTT
CTTCCATCATAATGAACTTTCGTTTTTGACATATCCAGTCTATTCATAAA
CATGGCTTTGATTCTTTTCCCATTATAATTAAATGTTTCTGCGAAACTTT
CAGCTGTTTCCCAATTTGGTGATGAATAGATTCCTTCCCCATACTGTTGT
CGTTCGCTACAACTGACGTCGTATCCCCCAGCAATGATCTTTTCAATCGT
CTTATGATCTTTTGGACCATGGTATGAAATAGCCCATTCCCCAGGCAATG
AACACTTCTCATTTACCCTTTCGCCTGGTCCAAACCAAACGTCGTTGACA
TATTTTCCTTTGATGTTCAGGGCGTATTTATTCCAACCATTTGGGCGGTT
GAAGACATAACCACCTCTGGTGAATCCCGTTTCTTTGTCTTTGCCATATT
GATGGTCGTACCTGGAGTCAGTAGCGCTTTCTGGAATGAAATCTAGACGT
TCTAGATTAACCATTTTCACCTCTTCAAAATCTGTATTTTTTTTCGACCT
GTGTATATAAACCTTCTTATCCAGATAAATCTCCAACAGCAAAAGGTCTT
TGTGAAGCCAAATGAGGTTTAAATACCACCTAATTTTAAAGGGAATTTCT
ATATAGCCTGGTGATGTAATGTTACAAAGCAAGAGAAACAATTTGATTGG
ATTAAAATAACTTTCATAAACAAACACGAAAACAACCGTAAAAATTTGTT
TGTTACAAATTACCCTCACAAGTATTGTACATTCAGTGAATACTGATTGG
CTCTCACAAAACATTACGTCAGCGTAACTTCCCCTGAATTGGAAAGAGCC
TTTTACATTTCTCAGAATTGTATTCATAAATATGCTGATGTTTACAATAA
CATTATGAAGTCCTTTTGGAAATTCCCCGAAGGGATTGAAGGGGAATTCC
TTGTAGAATTCGATCGTCTTTTTTGAAAATAAAATCTACATAGTAATAAA
GCTATCCAACTGTTTACGTTATTTTTCAGAGAAATTAGACTCGTGTAGAG
TAAGGAAAGAGAACAGAAAGAGAAATTCAACCAAACTGCTTTTAAAAATC
CAAGAATGTGGCAGAGAAGCATGGGTGTTGGTTTCAGTAGAAATGGTAAG
TCTTTTCTCTTTTCTGACCCGGTGGACAATTTGTCAATTTGGGTCTTGCA
TACTTATCATTTCAACTCGGGAGGGGGCACTCGTATGGTCTGACCCACGG
CATCTTTCGCCCTTAAGGGCAGTTTTTCGAGACCCTTGAAATGCACTGAA
AGGGTGATACTTTTGATACCCCCATTCTGATTTGTTTTTCACATTGAGTC
GACATCTCAAGCTCATTTTCTATCCCAATAGAAAACAAATTGGCAGATTT
GAGGGCTCAAGCCACTTGGTTGCTTATAAAAAATGTGTACTGGATACTTT
TATCTTTTCAGAGAGTCCAACTTCGATGTATGGAGGTAAGGGAGATTCAG
GTCAAAGAAATGAAAACGAAGATTTGAGTGAAGCAAAAAGACTTCTCCGG
GCAGCTGATCACCAATTTTGTAAGTTATACACCTAGTACCTATAGGTCCT
CTAGCAAATGTGATGGTTTACATTTTCTACGGTATTATAGAATTTATGGC
AATATCCTGTGTTGTTCATTGAGAAAAACAAATGCAACGAGTTTTCAACA
TTCGACGTCAATCCTTCCATGAACCTTTATGAACATATTTTACATACACG
CTTTTTTTTATAAGAGTGGTGTAAATCCATTTCATCATAGATATTCATAA
TTTTTTTGGGAAAATCATCCTAAAATATTTTTACAGCACACCTAGGTTAG
GATCCTAATTCATACTAGATTTAACATTTAGTACATACGTCTCAAGCATA
AAATGGCATTTTTGTAAAAGGAGTGAGCCTAACTTGGGGACAATTGATAA
TTTATAATTGAAAATGCTCTTAAAATGGCATTCTTAGCTTTAGTAGCAAA
ATTCCATGATGGTGATATTCTTAGCATATTCTTAGTTTTTTGGCCATTTT
CATCATGGGCATTCTTATAAAGTGTATTCTTATAAAAAAAGCGTTTACGC
TTTTAGTGGAGAACTCCTCTAACTTTTCTATTGAGCTGGATTTCATTGTG
TATTAATTCTCATGGAGAAAACAAGTCCATATTCCAAAAATTGTATACAT
GAAATGGCATGGCTGGTTCAATGTACTTCAACTTAGAATTCGCTTTTATC
TTCATTCTTTCAGTCGAATTCACAATAAACTGTACATAGCATTTCTCGAA
TTTTTTATAGGTAATGGGAAACTGTTTGACATTCATAGAAATTCAACTTT
CGTTTTCAACCAATTTGCTCACCAAAGTCAAAACCAAAAACGATACGAAC
ATTTAGGAAAGGTATATTCTTTTATCAAACCAAATTTGTTTGATTTTATC
CTTTAATATGCTACACGTGTTTTTATAAGAACAAACTACATAAGAACATA
AGGCTTCGATGGCTGAAATATTAAGAACAAGTTCAGAACATATTAAGGCT
TTACAGACCTTAAAATACCCAATTTCTTAGGAAAGTGGACAACGAAACTC
AAAAAATGGCGAAAATAAGAACATTTTAAGAACATTTTTAGGCTTAAAAC
TCAAAAATTTAAGAACATCCGAAGGCTTCAAAAAATTTGGATGTTCTTAT
AAAAAAACGTGTACCCCAAGAACGAAATAGGCCGTCAAGGTTGCTCAATC
AATTTCAAACGTTCATTGATACCTTTGAGTTGTAGAAACTTCCACAAAAA
AAAATTCGCGATTTTCGTGAATTTTGACAAATCCATGAAAGTTAATCTCG
CGAAAATTTTTGACCAATTTTGCTCCACATCCGTGTCAATCCAATGTGAA
AAAGCTTGTAAAATAAAACTGATGAGTAGGCAAACGATATCACTTATTTA
AAAAAAAAACCTTTAAAGGGGCAAACATTCACCAGCTTATTTTTGTGTTA
TCGGGCAATGAAATCACACCGGGAACAGGTAAATATTGATTTCTGATTGT
TTTTTAGATCATCGAGAAGTATGTTTATGGTTTACTGCAAGACAAATCGA
ACACTGGTCTGCAGTTGGTTAAAAGATATCTACCAGTATGAAGAGCTACA
TTGAATATTTCTTTACGGGAGGGTTTAAACTTTATTGAAAAAATTCATTA
TTTCCCTTCCTGGCTTTAGTTTGAAGCCAGTTAAAGCCAGCATATTATGT
TATAAGTAAGTTAGCGATCGCAGTTGACGATGGCCCGAAGACATCGTAGC
AAGACGGGTATATTCTATCCGATTTGTCGTTGGAGATATGGCCGGGTATA
GCTGATTCTAGATTCTGAAGGCGCACCCCTGTGTTACAGACCCGCTGGGA
TCCAAGCTCCACTGGAAAATTTGACAAAAATTTAGTTCCCGGTAGGAGAA
TACCCTTTCAGCCCCAACTCGAAATTTAATGTTTACAAATTGCACTCCAA
AACTATCCTACTGGATTTTTTTAACCTCGGAACAGTAGAATTTCTATCCC
CATTGGGATTTCAAATTGGAATTTTTATCCCCACTGAGGAAAAAGGTTCC
ACCGGGGCTGTGAGACAGGGGTGTGAAAGTAGAATATCCACTGGATATAA
TTACCAGCTTCATTAGATTTTTATGTCTCCAGAGTAGAACTGATGTAAAA
GATCTTTACCAATTTCTCGGTTTCTCCGATGGGGAAATTCAATTGTTCTA
AAAATTGAATAAAATATTGTCAAACCAGACGAACCCTCAATATTTAATTC
CTTTGGTTTTTAGCTTTCCAGTTCATTGGGTCTATCAAACGATTTCATTT
TCCATACAAAAGACATTGAGAGATATGAAAAGATCTTGATTTTAATGCAT
GGTAGTGGTGTAGTCAGAGCTGGCCAATGGTCAAGGAAATTGATCATGAA
TGTATCTGTAGACGCAGGTTCAATGTTACCGTATGTTAGGAAAGCTCACC
AATATGGTTACGGTGTTGTGGTGGTGAATATCAATCAACCATATGATCAC
CGTTCGTCGGTAATTACATTTTCTTTTGTATTGATTACATGAAACTTGCT
CCTAAAACATCCCCTTCTCACAGACCCGATGGAACCCTTCCCATTGCAAA
AATTGGCTAACGTCCCCAGTGGAAAATTAAACTCCCATTTTTGTCCCCAC
TGAAAATAATCTAATAAACCAATCCTCACTGCAAAATATTTTGCTATTTC
TCCCGTCCCCACTGACTTTTGTGACTTGAAAGCAAAAGAATTAAAATGC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_002132XLOC_002132Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00003823-exon-sc0000031-1575043694:877381..877776TCONS_00003823-exon-sc0000031-1575043694:877381..877776Clytia hemisphaericaexon
TCONS_00003823-exon-sc0000031-1575043694:876370..876555TCONS_00003823-exon-sc0000031-1575043694:876370..876555Clytia hemisphaericaexon
TCONS_00003823-exon-sc0000031-1575043694:875088..875204TCONS_00003823-exon-sc0000031-1575043694:875088..875204Clytia hemisphaericaexon
TCONS_00003823-exon-sc0000031-1575043694:874052..874417TCONS_00003823-exon-sc0000031-1575043694:874052..874417Clytia hemisphaericaexon
TCONS_00003823-exon-sc0000031-1575043694:870932..872685TCONS_00003823-exon-sc0000031-1575043694:870932..872685Clytia hemisphaericaexon
TCONS_00003823-exon-sc0000031-1575043694:870508..870615TCONS_00003823-exon-sc0000031-1575043694:870508..870615Clytia hemisphaericaexon
TCONS_00003823-exon-sc0000031-1575043694:869666..869766TCONS_00003823-exon-sc0000031-1575043694:869666..869766Clytia hemisphaericaexon
TCONS_00003823-exon-sc0000031-1575043694:868942..869019TCONS_00003823-exon-sc0000031-1575043694:868942..869019Clytia hemisphaericaexon
TCONS_00003823-exon-sc0000031-1575043694:867778..868263TCONS_00003823-exon-sc0000031-1575043694:867778..868263Clytia hemisphaericaexon
TCONS_00003823-exon-sc0000031-1510915933:877381..877776TCONS_00003823-exon-sc0000031-1510915933:877381..877776Clytia hemisphaericaexon
TCONS_00003823-exon-sc0000031-1510915933:876370..876555TCONS_00003823-exon-sc0000031-1510915933:876370..876555Clytia hemisphaericaexon
TCONS_00003823-exon-sc0000031-1510915933:875088..875204TCONS_00003823-exon-sc0000031-1510915933:875088..875204Clytia hemisphaericaexon
TCONS_00003823-exon-sc0000031-1510915933:874052..874417TCONS_00003823-exon-sc0000031-1510915933:874052..874417Clytia hemisphaericaexon
TCONS_00003823-exon-sc0000031-1510915933:870932..872685TCONS_00003823-exon-sc0000031-1510915933:870932..872685Clytia hemisphaericaexon
TCONS_00003823-exon-sc0000031-1510915933:870508..870615TCONS_00003823-exon-sc0000031-1510915933:870508..870615Clytia hemisphaericaexon
TCONS_00003823-exon-sc0000031-1510915933:869666..869766TCONS_00003823-exon-sc0000031-1510915933:869666..869766Clytia hemisphaericaexon
TCONS_00003823-exon-sc0000031-1510915933:868942..869019TCONS_00003823-exon-sc0000031-1510915933:868942..869019Clytia hemisphaericaexon
TCONS_00003823-exon-sc0000031-1510915933:867778..868263TCONS_00003823-exon-sc0000031-1510915933:867778..868263Clytia hemisphaericaexon
TCONS_00003823-exon-sc0000031-1491911889:877381..877776TCONS_00003823-exon-sc0000031-1491911889:877381..877776Clytia hemisphaericaexon
TCONS_00003823-exon-sc0000031-1491911889:876370..876555TCONS_00003823-exon-sc0000031-1491911889:876370..876555Clytia hemisphaericaexon
TCONS_00003823-exon-sc0000031-1491911889:875088..875204TCONS_00003823-exon-sc0000031-1491911889:875088..875204Clytia hemisphaericaexon
TCONS_00003823-exon-sc0000031-1491911889:874052..874417TCONS_00003823-exon-sc0000031-1491911889:874052..874417Clytia hemisphaericaexon
TCONS_00003823-exon-sc0000031-1491911889:870932..872685TCONS_00003823-exon-sc0000031-1491911889:870932..872685Clytia hemisphaericaexon
TCONS_00003823-exon-sc0000031-1491911889:870508..870615TCONS_00003823-exon-sc0000031-1491911889:870508..870615Clytia hemisphaericaexon
TCONS_00003823-exon-sc0000031-1491911889:869666..869766TCONS_00003823-exon-sc0000031-1491911889:869666..869766Clytia hemisphaericaexon
TCONS_00003823-exon-sc0000031-1491911889:868942..869019TCONS_00003823-exon-sc0000031-1491911889:868942..869019Clytia hemisphaericaexon
TCONS_00003823-exon-sc0000031-1491911889:867778..868263TCONS_00003823-exon-sc0000031-1491911889:867778..868263Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000031supercontigsc0000031:867778..877776 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.421222	0.274422	0.184618	0.195671	0.256535	0.376475	3.28422	4.92274	4.40979	14.1943	4.12988	3.8015	13.7938	11.6309	31.4181	42.7079	6.82401	10.151	13.8569	11.6988	2.35236	2.1822	3.6674	4.84279	8.01488	7.67858	7.58305	9.48472	16.3074	7.38824
Blast
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BLAST of TCONS_00003823 vs. Swiss-Prot (Human)
Match: F172A (Protein FAM172A OS=Homo sapiens GN=FAM172A PE=2 SV=1)

HSP 1 Score: 115.931 bits (289), Expect = 4.819e-27
Identity = 61/138 (44.20%), Postives = 92/138 (66.67%), Query Frame = 2 
Query: 2933 GKLFDIHRNSTFVFN--QFAHQSQNQKRYEHLGKIIEKYVYGLLQDKSNTGLQLVKRYLPLSSSLGLSNDFIFHTKD-IERYEKILILMHGSGVVRAGQWSRKLIMNVSVDAGSMLPYVRKAHQYGYGVVVVNINQPY 3337
            G+L  I     FVFN  +  H+  NQKRYE LG+II KYVY LL+   N    L K  +P+ ++      FIF ++D +   +K+++L+HGSGVVRAGQW+R+LI+N  +D+G+ +P++++A   GYGV+V+N N+ Y
Sbjct:   71 GQLRHIKTGEPFVFNYREDLHR-WNQKRYEALGEIITKYVYELLEKDCN----LKKVSIPVDATESEPKSFIFMSEDALTNPQKLMVLIHGSGVVRAGQWARRLIINEDLDSGTQIPFIKRAVAEGYGVIVLNPNENY 203
The following BLAST results are available for this feature:
BLAST of TCONS_00003823 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
F172A4.819e-2744.20Protein FAM172A OS=Homo sapiens GN=FAM172A PE=2 SV... [more]
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