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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00003816 ID=TCONS_00003816|Name=TCONS_00003816|organism=Clytia hemisphaerica|type=transcript|length=356bp
caaagatGGCTTCGGACTTCCTACTAACATGCGCAACCGCATGTAGATAG
GAAGTTCAAGCCAAGGGGCTGATGGAGCTCCGTAGCCTGGGAGGGCAGTC
CGTCTAGGAGAAGCTGAACTCCGAAATCAAACGCAAGGGCGGATGAGGCT
CTACAGTCATGGTGAAGACAACTCATCTAGGAGAAGATGAACTCTGAATT
CAAAACCAGTCAAATGCAAGAACATCAGTGAGAGAAGACTCGAAATACAA
ACTAAATTTCTATCAGGTCGagataaaatcaaaacacaGCATCGTCCACA
AGATTGTTATAGCTGCCATCCTAAGTCTTCAAAAGGCTAATATTGAACAT
CAGAGG Run BLAST on NCBI transcript from alignment at sc0000031:727443..728469- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00003816 ID=TCONS_00003816|Name=TCONS_00003816|organism=Clytia hemisphaerica|type=transcript|length=1027bp|location=Sequence derived from alignment at sc0000031:727443..728469- (Clytia hemisphaerica)
CAAAGATGGCTTCGGACTTCCTACTGCAAGTATTTATTTGGTCGACATTA
ACTTACCACTGCAATCATATGAGATCGCCCAATTTTTTCGGTCCTGTACT
GGTAGATCTGGAACTAAGAACGCCCTGTTTTGCCTTACGCCCAGTTTTTT
GAACCCGACAAAAAAATTAGAGATCGGTATTGTTTGCTTAGTTTGACCTC
GTTCGCGCATCCGAAATCAAAAAGATATTACCGAATTATTACGAATTTCT
TTCGGGAAATGAATTCAAAGTCAATTTATAGATGGGTCCTAATAAAGAAA
AAAATGCACTGCTACCCACATCTCAACATTTTTGAATTTCTTCAGGCATA
TAGTTTGAACAATTAAAAATCCCATTCAAAAAATCCCACCTTTTCGACCG
TAGCCGCCAATTACCGTGCGAGCATTTTTTTGTCCGTTTTACCACCCTAA
AAACGTCCCAGTGTATTTTTCGCACCTATAGACAATAGAAAAAGGTGTCA
AAAAGGATTGGATCGAGTTTAGGGGGATAATTAAATAATTAAGTGGTACG
CGCCTGACCGCGCGACTACGGTTGAAAAGGTGTATTAAAAATCACATTCG
AAGACCATAAATTTAGTATTACGGTAAGAAAAATGAAGAACAGTCTACAC
TACACTTGATAATGTAATGAATATTTATCTCGATTTTTATTTATAGAACA
TGCGCAACCGCATGTAGATAGGAAGTTCAAGCCAAGGGGCTGATGGAGCT
CCGTAGCCTGGGAGGGCAGTCCGTCTAGGAGAAGCTGAACTCCGAAATCA
AACGCAAGGGCGGATGAGGCTCTACAGTCATGGTGAAGACAACTCATCTA
GGAGAAGATGAACTCTGAATTCAAAACCAGTCAAATGCAAGAACATCAGT
GAGAGAAGACTCGAAATACAAACTAAATTTCTATCAGGTCGAGATAAAAT
CAAAACACAGCATCGTCCACAAGATTGTTATAGCTGCCATCCTAAGTCTT
CAAAAGGCTAATATTGAACATCAGAGG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00003816-exon-sc0000031-1575043694:728445..728469 | TCONS_00003816-exon-sc0000031-1575043694:728445..728469 | Clytia hemisphaerica | exon |
| TCONS_00003816-exon-sc0000031-1575043694:727443..727773 | TCONS_00003816-exon-sc0000031-1575043694:727443..727773 | Clytia hemisphaerica | exon |
| TCONS_00003816-exon-sc0000031-1510915933:728445..728469 | TCONS_00003816-exon-sc0000031-1510915933:728445..728469 | Clytia hemisphaerica | exon |
| TCONS_00003816-exon-sc0000031-1510915933:727443..727773 | TCONS_00003816-exon-sc0000031-1510915933:727443..727773 | Clytia hemisphaerica | exon |
| TCONS_00003816-exon-sc0000031-1491911889:728445..728469 | TCONS_00003816-exon-sc0000031-1491911889:728445..728469 | Clytia hemisphaerica | exon |
| TCONS_00003816-exon-sc0000031-1491911889:727443..727773 | TCONS_00003816-exon-sc0000031-1491911889:727443..727773 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000031 | supercontig | sc0000031:727443..728469 - |
Blast
The following BLAST results are available for this feature:
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