TCONS_00003813 (transcript) - C. hemisphaerica

Overview
NameTCONS_00003813
Unique NameTCONS_00003813
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1178

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00003813 ID=TCONS_00003813|Name=TCONS_00003813|organism=Clytia hemisphaerica|type=transcript|length=1178bp
ttttcagactaaataaaagaaaagaaacgatGAGGTGATAACAAAAAAGT
AATTTGCAATGGCATCTCGATTGGTTGTGACTGATCCCTTTGCTAAGAGC
AAAAAGACaattgatgagattgatttAGCATCATCTTTGACCaatttcaa
gaagtctgtctacgTGGAATTTGGTGTCAAGGTTGAGGAGCAAGAATTGT
TGTACCTTGGACAAATTTTGGAAGACGATGAAAAATCGTTACAATCATAT
GGAGTACAAAATGAAACAACAATTTATTTGTTTAAAAAGTTGCCTGAGGA
AGAGCCTAAAATAActgAAATGCGACCAACACCGAGCATCGATGAAATCT
CCTCATTGTTGGCTAAAGCCAAAAACCCTGCTTTCAAAACAATGttaaag
aaatttttccaaaagaaagaaaacatagAGAAGATTCTGAACGAGaacga
aaagttgaaaaatgatgATATTGTGGCAGCGTTGTTGAGAGACTCCGATT
TATCTGCGCCAGTTTTAGAATCACTCACTCCTGAAAGAATTGTGAATGAG
TTTCCCAATTTGGCATTGGCGTTAAAGTTGGTTTTATCAAAGTTGAGTGC
TACTGATTCCATTGGACGAAGAGATTTATTACAAGATGGAGAAGATTATG
AAGGCATTGACCCTGCTTACCTAGCACAAGCAGAACTAATGGCGTCCAAC
GAAGCTGCTATTCAACagaaccaacaacaacaacaaagttCTGCCTCATC
TCAACAAAATGCTCAACAGATTTCTGCTGCTGACCTAGCAAATGCTCTAT
CCTTTGCTACAATGACACAAGatcCTGCTACACCGAGTAGTTTACCCTTT
GGAAGTCCTGGTTCGCAACCCAATCGACAACCACAACCGGATttcaCAGC
TGGTATAGAACAAATGAGAACCGAGTTTAATATCTCTGAAGACGTGGCAA
GAAGAGCTCTGGTAATGACCAACGGGAATGTGCAAATGGCTGTTAACCTT
GTTTTTGACGGATCTGTCAATTAATCAATGTTTTCAAATTCGATcctatt
ttttaaacaaaagttaAGTTTTGAATTAATACAATGTAGATTAACTAACA
GCCATTGATAGGATGCTTGGATGGCTTGGTCATTCtggtcattttggaca
gttctAAAACGTTGCTTGTTCTATCTTT
Run BLAST on NCBI

protein sequence of TCONS_00003813-protein

>TCONS_00003813-protein ID=TCONS_00003813-protein|Name=TCONS_00003813-protein|organism=Clytia hemisphaerica|type=polypeptide|length=321bp
MASRLVVTDPFAKSKKTIDEIDLASSLTNFKKSVYVEFGVKVEEQELLYL
GQILEDDEKSLQSYGVQNETTIYLFKKLPEEEPKITEMRPTPSIDEISSL
LAKAKNPAFKTMLKKFFQKKENIEKILNENEKLKNDDIVAALLRDSDLSA
PVLESLTPERIVNEFPNLALALKLVLSKLSATDSIGRRDLLQDGEDYEGI
DPAYLAQAELMASNEAAIQQNQQQQQSSASSQQNAQQISAADLANALSFA
TMTQDPATPSSLPFGSPGSQPNRQPQPDFTAGIEQMRTEFNISEDVARRA
LVMTNGNVQMAVNLVFDGSVN
Run BLAST on NCBI

transcript from alignment at sc0000031:642877..653789-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00003813 ID=TCONS_00003813|Name=TCONS_00003813|organism=Clytia hemisphaerica|type=transcript|length=10913bp|location=Sequence derived from alignment at sc0000031:642877..653789- (Clytia hemisphaerica)
TTTTCAGACTAAATAAAAGAAAAGAAACGATGAGGTGATAACAAAAAAGT AATTTGCAATGGCATCTCGATTGGTTGTGACTGATCCCTTTGCTAAGAGC AAAAAGACAATTGATGAGATTGATTTAGCATCATCTTTGACCAATTTCAA GAAGTCTGTCTACGTGGAATTTGGTGTCAAGGTTGAGGAGCAAGGTATAG TCTGTCAGGGATTTTTCTAAGCAGTTTTTTATGTCCGTATACTGGCCAAA ATACTCAATATAACATTATCCAAAATAAATGAGAGCTTCATCAATGTACA TCATTGCAGGCATATTAGAAATTCAATCTAAGTTTACAGAAACGGAGTCT GCTAAATCGCGTGCCAGCGTGCTATGCGTGCCAGCGTGCCTACGTGCCAT GCGTGCCTGCGTGCCAACGTGCCATGGCGTGCCAACGTGCCAGCGTGCCA TCCAAATTTAGCGTGCCATTAAAACTTCGGCGTACCATCCAAATTTCGGC GTGCCATCCGAATCCGGCGTGCCATCCAAATTTCGGCGTGCCATCCGAAT TTTGGCGTGCCATCCGAATTTTGGCGTGCCATCCAAATTTCGGCGTGCTC GTCCGAATTTTTACCGAAATTTCGGTAAAGCTTGGGGGAGACGATCATAG TAATGATGTTTTTATGTCACGAATAGGTAAGTGCTTTGTCGTTAAAATCT ACTCTCATACGCAGATCTTTCTTCACCCCTGTCCACGCTACTGTTCTAAA AAATTGAAAAAGCTTTTCATTCATTCTGAAACCTTTTGAAAAAGTTTTTT TTCTGGAATTTTTTTTTTGAAAACCTAAAACTTCAAAATAGCCAAAAAGC TCATGAGTTTACGGTTACCGTTTTTGCCTTTTTTCAGAAGTCATCATTTT TCTTGACTTTTTCTTTTTCTTACTCCCCTCACTTGCCGTACTTTAACCCG TGTAAGAGAAAGTAGTAAGTGTATATTTCAAAATATCGCCTAACAATTAA TGTTTCATGGAAAATAAAGACTCTGGAAATTTAAAAAAGTACGCAAAATT TGGTTGTCACGCCAAAACTTGGATGGGACGCCGGAATTTGGTTGGCACGC CACAACCTGGATGGCACGCCGGAATAAGGATGGCACACCAAAATTTGGTT GGCACGCCAAAATTTGGATGGCACGCCAAAACTTGGATGGCACGCCGGAA TAAGGATGGCACGCCAAAATTTGGATGGCACGCCAAAATTTGGATGGCAC GCCAGAATTTGGATGGCACGTAGGCACGCTGGCACGTTGGCACGCCAAGA CACGTTGGCACGCTAGCACGTTGGCACGCCAAGACAGTTGGCACGCTGGC ATGCTGGCACGCCAAGACAGTTGGCATGAAGGCACGCATGGCACGCTGGC ACGCTTAAAAACCGATGGCACGCTGGCACGCGTGGCACGCGATTTAGCAG ACTCACAGAAACGGCCCCAGCTCAAATTGCTTAGAAAAATCTTTTGTCTG TTCATTTTCATTTGGTTTATCGTTAACTATTTTATTAATTATTATTATTC TATTAAGTAAAATTCTTTTAAACCAATTGAAATGAAGTGTTAGTAAAAAA CCATTATATCCTCAAGCATAAAAAGCTGTAATTTGATGATATTTATAACG CTTAGGGTAGTTTTAACACAACACCATAAAACCAGCTTTTTTCAATTTTG AATTGATTTTGGTGAGTTTCCCCCATGCCTAATCAAAATATTTTATTTCC CACTCGCTTTTCCCCATTCTGGCTTCAAAAAAAATTCTTTCCCCCAAAAA AGGACGATGCTAAAAGGATGTATGGTTTCAAAACGCATCCCTCCCCTGAA TCCAGGGGAGGGCACTATTGCGACTTTAGACCATGATATGAGTCTCGAAA TGGAAGGTTGTGATCTTGAGTTTCTCTTATTTTTCTTATTCATAGAATTG TTGTACCTTGGACAAATTTTGGAAGACGATGAAAAATCGTTACAATCATA TGGAGTACAAAATGAAACAACAATTTATTTGTTTAAAAAGTTGCCTGAGG AAGAGCCTAAAATAAGTTTGTATCCAATTCTATGTGTTCATTGGACTATC TTTTTTCATTTATTGCTTCATTTGTTGATTGGTTTCTTTCCGGGGGGACT GACCTTGACGACCGACGGGGACGTGTCGCTGGAGTTTGAAAAGTGGACCC TGTCAGGTATGAATGTTTGGTAAATTTGGGACCCTGTCGGAAGGAAAATT AAAACAAAATCCCGCATTTTCACCTTGAAAAGTGGCAAAAATGACGAAAT GTAGACAAAAGATTGAAAAATTTTCTAATTTCCACCCTGAAAATTGTCCA ACATAACCAAAAGACGACCCTGTCAGGTACGAATGTTGAAAATTAGTAAA TTTGGGACCCTGTCAGAAATCTATAGAGCCCAAAAAAGGGACCCTGACCA GCGGCACGTCCCGTTCCCAATTTTGCTTGAGTGTCTCCCCTGGGGCTTCT TTCTTGAAATTCCAAAATATTTAAATGATTAATTTTAAGAGACATAGCAA CTAAAAGTTGATATCAAAATAGGACATGCGGAAGGAATGTAGGAGGCAAA GACCTGTACTCTTTAATATAGATTTTCCAGCTATTATTCATCCTACACTA TTAGCCTTTATTCTAGTCATTGTAAATTTTTGAAAGTCAGTCTGTTAATA CCGTAACTTGGTCTAATATCGACACTCCTAATCTAATTCTGACACCCTTC TTTAAAGATAGAAATAACATGAAGGTTGGAATGACTGATTGAGAAAATAT TATTTGCTCTCTGTGACCGCTAAGAAAATATAGTTTCAATTTATAGCGAT TCTGATCTTCCTTTGAATCCAATCTCTAAGGAGGATGTCGGAATGGAATG AGATGAGGGATGTCGATATTATTAGACCAGCTTATTACGGTAGTCCTTGT AAGTCAACTTGAGGAAGTGTGTCCAGGGTGGGCGGTGAAATCGGGTTGAA AATCCCGGTGGTCAGTATTACGAGGTCGAAAATCCAGGGGGCTCCAGAGA AATGGGAGAAAAAAATCCAAGGGGGGTCCTGAAAAATTGGTAAAAAATTG AATTTTTGAAAAAAGATCACCTCGACATACGGGGTACAAATTTTTTCTGG AATAGCCCAATCTTACTGATTCATCTTAGTTAACTTGGTTTTATGATTTT TCTAATGTATTTTTTCTTTTAGCTGAAATGCGACCAACACCGAGCATCGA TGAAATCTCCTCATTGTTGGCTAAAGCCAAAAACCCTGCTTTCAAAACAA TGGTATGTAGATACAATTTTGTGTCTTCTTATTTTGAAAAGTATTGCATG CAACTTTTTTAAGGGCATGTAAAAGCTATGAAAAAACCTTTCATTTATTC ATGATATGCACCATTGCAATGTCTTGGTTTTATTGAAAAGCGTAAACTTT CATTTCATGGGTGGGAAACATTCTGGTTAGAATGCACTGAAAATGATTTT TGAAGAAACTAGTTGGTTTTATTTTACTATTCGTTTACTTTTTTTTTTAG TTAAAGAAATTTTTCCAAAAGAAAGAAAACATAGAGAAGATTCTGAACGA GAACGAAAAGTTGAAAAATGATGATATTGTGGCAGGTAAATATCATATCC TTTTATTGGAAGTGAAAAAAAACAAAAAACACTAAACCACATTTCTTGCC CAAATACTTTGCTTAATTCATATTAAGTAAGTGATCTGGGAAAGAGAAAA AACCTTACTCCTGACACCATGCCGTGGCTAAGAATCGTTTGAATGGTCTT TCTCAAGACAATAAACCTTTTCATAAATTACGTTACGAACTATGGTAATT GTTTGAATACGAGGTAAGTGATGTTCGGGACGTAATTTATGAAAAAGGTC TATTAACGAGCTTTTAAAAAGACTCAACAATCTCGAAAGCCAAGAACCTC ATTGGTAAGAGTGAAGAAGGCTTGGGGACGGTCACTTTAGCCCAACACAA GATAAACGAAACCCTATCTGTAAGATAAGCCCTCCAATTTTTACCAACTG AGCATTTTTGTTTTTCTTATTATTCTTTGAATTATCCTTTTACTTTCCAG CGTTGTTGAGAGACTCCGATTTATCTGCGCCAGTTTTAGAATCACTCACT CCTGAAAGGTACGTTAATATTTACTCAGTTTTTTCATAATTCAAAATCAA AGTTCCATTAGCTCCACTAACCTTTTTTAAAACCCTGGACTAAGCTATAT ACGGTGGAGTTTTATCGTAGTTTTTTAAAAGTGGTATCAAACGGCGTTAC ATCACAAGAATCTAGCGAAAAGTACATCTAGCCTTTCAAAAAAAACCGAT CAAAGATTTTAGTTGCCGGGACTAAGAAACTGCAATCCCCAACAAATGAC TTGAGACAAAAGAATTCTAAACATTTTTACAAGTTAAAAATCTGTCCCCC GGACCCCACTCTATCAGTGTGGAGTCCGGAATTGGCGGAGAACTCAACGC TGACAGTGGGGGAAAGGGGGACCATGTGAAGTGTCTCAGATATAAATTTG GGGATTGTGGCTCCGGTGGTCAGGTCCTTCTTTGGGTAACTATTTTGCTG TTTAAATAACAAATATATCTCATTCCTTTTATTCCCATGAGAAACTCAAA GATCCGTTTTCTAAAGGATTTTCTTATTGTCACTCGTTTGTGTACCTTAT CGGGAAAAACTTCGTCGGGGAAAAGTGACGAAATTTTGGCCAAGTGACGA ATATTTTTCCCAGACGAAAATTTTCCCCGGCCTTAATGTGTTTACCAACT AGCAGCAAGTGACGAATATTTTTCCCCTACGAAAATTTTCCACGACGAAG CTTTTCCCGATAAGGTATTTCAGCCTTCTCTAAATATCAATCTTTAAATG AATAGAATTGTGAATGAGTTTCCCAATTTGGCATTGGCGTTAAAGTTGGT TTTATCAAAGTTGAGTGCTACTGATTCCATTGGACGAAGAGATTTATTAC AAGATGGAGAAGATTATGAAGGCATTGACCCTGCTGTAAGTTGTGATTAC CGTTGAGTTTAAAACCCCGGATGAGCCAGAGGCGAAACTCTAGGGTGGAA AATAAAGTCAGTTAGGCTTTTCCAGAAATAGTCCGTCCCCCCCTGTTAAG GTATCGGATATCCAGGGGGTTAATGATATTTGTTTAAAAGTGGATATCCA GGGGTTAGATATCTACAAGGGAGTGGATATTCAGGGAGTTAAATGTCTTT TCAAGTAAAAAATACGATATCCAGGGCTAAGCATCTTTATAAGATATCCA GGGGTAGAGCATATTTTAAGATTACGAAGGCATTGACCCTGCTGTAAGTT GTTATTACCCCGCAGTGGCGGAGAGCCTTTATTTCTTTTTTAAGAAGTAT GGCTTCAAGAAACACTCTCCGTCATTAACTTTGAACCCCTTCAGATCCAT CAGAAGAGAACTTCACTCAACCTGAAAAATTAGAGCGCTCTAGTTCACGT ATGATAGATTACTGATGTTCGTCCGTTCGTTAGTTCGTTAGTTCGTTAGT TCGTTAGTTTTCTCGAGATTGGCTCATTAGTTTTTCCTGATTTTTGGCAA AAAGATGCAAAATAATAATAATAATAATAATATTTTTCCTCAGAGTTAAA AAGTAATAATAAATATATTTATAAATATGTTTTAAACTCTATTGAGGTTG GCGCCCGGGGAGCGCCAGGATTTTCTTTCCACCATCATTGTTAGTGCATC TGACTCACTCAGTCCATACAACTTTGCATCTCTGATGACTTCACGGTATG TCGAATTCGTTACACCTGGTTTCTTTTTTAGACCAGGGTGGTACTGTTCA AAAGTTAACTTTTTTATGTAGCATTCGTTTGAAGCTCGGGTGCAGTGTGC AATCAAGTTGTATTGCTGATGTTGAAGGTACTTAGAAAGCGAAGGCCGGT CGATAAGGTTTTTGATTTGCTCATTTGAGTAAAGTAGTTTTTTGAATGCT CCTTTTTTTCCATCATTTGTTGTATATTCAATCAGTTCAGGTTTGCGTTG ATTACCTCCTCTGACTAGGTAACGTAAGAATTTGATATATTGACTCTCAT TATGATCGAATTGTTTCTTGGTCAATGTCCAGCACTGACATCCATACATG AGACGGGAGCGAACAAGTGATTCGAGGTATAGAACTCTGGTGTGAAGTTT GATTTTANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN 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CACAGTCGAAATGGACCATGGGTAATCAGGACTGATTGCGCCCCGATAAC GGTTTCCCGTTGGTTAGACGCAAAAAAATTCAAAAATGTGGAGCAATAGT AAGTCGTCATTAGCGAGCAGTGGTCCTGATTACCCATTACGCTTTGCAAC TGTGAAATGGCCTATGTAAAGATCGGTCAGTGATACTAACCATGTGATCT TTTTAAACACTTTTTCTTTCATCTGTTGCTATTATTGTTGAAACAATCCA GGCTGGGAACTTTTTCACAGTCTAGATTTTGATGTTTTCATGGATTATTT CTGATTTTCCGTCCGGTGGTCCTGAATCGACTTTGTGTATATTGAATTGG GAATTAAGGGCATGATGCGGTGGTTTGTAAATGGATTGTGCGTACACTCA ACAAAAAGCTAACCCTTGGTTTGCAGTTAATAATGAGACCACGTGTTAAA TTTCGAGAAATCTGTACACAGGGTATGTTTTTTCTTTGAGGTTTTCAAGC TTCCACATTTTTGGGCATGCTGCTATGTAAAAATCGCTTGATGGAAATAT TCTCAATTTTTCGTTTTTCTATTTTAGATCCTGCTACACCGAGTAGTTTA CCCTTTGGAAGTCCTGGTTCGCAACCCAATCGACAACCACAACCGGATGT AAGAATTGGATTTTCATTTTTTGCTTCATTAAGAACCATACAGGGGGGGG GGACATTTTCAAGTCAAAAAAAGAATTATTGAAAATGTGTGGATGCACTC TGGAAAATTTATTTATTTATTTATTTATAGTAATATATTTCGCAGGTCTA TCGACCTCTATGAAATAATCATATTTAACATTTTGTAGGCGCACAGTTGG CCTCTAATCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN 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TAATAATGTAGCGCGCGCTCTTTTCAAACATTACGTCAGATCGCGCCAAT GGAATTGCTTCATTTTTCTTTTGACCAATAGCGTGGAAGCTTTACCAGAT AAAGTGCGGTCGCAGCGCGCGCAAGTGGAGACCGGCCTTAAAAGAACTTA AAATGCATTACCTTTTGTTTTTTTTAGTTCACAGCTGGTATAGAACAAAT GAGAACCGAGTTTAATATCTCTGAAGACGTGGCAAGAAGAGCTCTGGTAA TGACCAACGGGAATGTGCAAATGGCTGTTAACCTTGTTTTTGACGGATCT GTCAATTAATCAATGTTTTCAAATTCGATCCTATTTTTTAAACAAAAGTT AAGTTTTGAATTAATACAATGTAGATTAACTAACAGCCATTGATAGGATG CTTGGATGGCTTGGTCATTCTGGTCATTTTGGACAGTTCTAAAACGTTGC TTGTTCTATCTTT

Coding sequence (CDS) from alignment at sc0000031:642877..653789-

>TCONS_00003813 ID=TCONS_00003813|Name=TCONS_00003813|organism=Clytia hemisphaerica|type=CDS|length=8694bp|location=Sequence derived from alignment at sc0000031:642877..653789- (Clytia hemisphaerica)
TTCACAGCTGGTATAGAACAAATGAGAACCGAGTTTAATATCTCTGAAGA
CGTGGCAAGAAGAGCTCTGGTAATGACCAACGGGAATGTGCAAATGGCTG
TTAACCTTGTTTTTGACGGATCTGTCAATTAAATCCTGCTACACCGAGTA
GTTTACCCTTTGGAAGTCCTGGTTCGCAACCCAATCGACAACCACAACCG
GATTACCTAGCACAAGCAGAACTAATGGCGTCCAACGAAGCTGCTATTCA
ACAGAACCAACAACAACAACAAAGTTCTGCCTCATCTCAACAAAATGCTC
AACAGATTTCTGCTGCTGACCTAGCAAATGCTCTATCCTTTGCTACAATG
ACACAAGAATTGTGAATGAGTTTCCCAATTTGGCATTGGCGTTAAAGTTG
GTTTTATCAAAGTTGAGTGCTACTGATTCCATTGGACGAAGAGATTTATT
ACAAGATGGAGAAGATTATGAAGGCATTGACCCTGCTCGTTGTTGAGAGA
CTCCGATTTATCTGCGCCAGTTTTAGAATCACTCACTCCTGAAAGTTAAA
GAAATTTTTCCAAAAGAAAGAAAACATAGAGAAGATTCTGAACGAGAACG
AAAAGTTGAAAAATGATGATATTGTGGCAGCTGAAATGCGACCAACACCG
AGCATCGATGAAATCTCCTCATTGTTGGCTAAAGCCAAAAACCCTGCTTT
CAAAACAATGAATTGTTGTACCTTGGACAAATTTTGGAAGACGATGAAAA
ATCGTTACAATCATATGGAGTACAAAATGAAACAACAATTTATTTGTTTA
AAAAGTTGCCTGAGGAAGAGCCTAAAATAAATGGCATCTCGATTGGTTGT
GACTGATCCCTTTGCTAAGAGCAAAAAGACAATTGATGAGATTGATTTAG
CATCATCTTTGACCAATTTCAAGAAGTCTGTCTACGTGGAATTTGGTGTC
AAGGTTGAGGAGCAAGTTCACAGCTGGTATAGAACAAATGAGAACCGAGT
TTAATATCTCTGAAGACGTGGCAAGAAGAGCTCTGGTAATGACCAACGGG
AATGTGCAAATGGCTGTTAACCTTGTTTTTGACGGATCTGTCAATTAAAT
CCTGCTACACCGAGTAGTTTACCCTTTGGAAGTCCTGGTTCGCAACCCAA
TCGACAACCACAACCGGATTACCTAGCACAAGCAGAACTAATGGCGTCCA
ACGAAGCTGCTATTCAACAGAACCAACAACAACAACAAAGTTCTGCCTCA
TCTCAACAAAATGCTCAACAGATTTCTGCTGCTGACCTAGCAAATGCTCT
ATCCTTTGCTACAATGACACAAGAATTGTGAATGAGTTTCCCAATTTGGC
ATTGGCGTTAAAGTTGGTTTTATCAAAGTTGAGTGCTACTGATTCCATTG
GACGAAGAGATTTATTACAAGATGGAGAAGATTATGAAGGCATTGACCCT
GCTCGTTGTTGAGAGACTCCGATTTATCTGCGCCAGTTTTAGAATCACTC
ACTCCTGAAAGTTAAAGAAATTTTTCCAAAAGAAAGAAAACATAGAGAAG
ATTCTGAACGAGAACGAAAAGTTGAAAAATGATGATATTGTGGCAGCTGA
AATGCGACCAACACCGAGCATCGATGAAATCTCCTCATTGTTGGCTAAAG
CCAAAAACCCTGCTTTCAAAACAATGAATTGTTGTACCTTGGACAAATTT
TGGAAGACGATGAAAAATCGTTACAATCATATGGAGTACAAAATGAAACA
ACAATTTATTTGTTTAAAAAGTTGCCTGAGGAAGAGCCTAAAATAAATGG
CATCTCGATTGGTTGTGACTGATCCCTTTGCTAAGAGCAAAAAGACAATT
GATGAGATTGATTTAGCATCATCTTTGACCAATTTCAAGAAGTCTGTCTA
CGTGGAATTTGGTGTCAAGGTTGAGGAGCAAGTTCACAGCTGGTATAGAA
CAAATGAGAACCGAGTTTAATATCTCTGAAGACGTGGCAAGAAGAGCTCT
GGTAATGACCAACGGGAATGTGCAAATGGCTGTTAACCTTGTTTTTGACG
GATCTGTCAATTAAATCCTGCTACACCGAGTAGTTTACCCTTTGGAAGTC
CTGGTTCGCAACCCAATCGACAACCACAACCGGATTACCTAGCACAAGCA
GAACTAATGGCGTCCAACGAAGCTGCTATTCAACAGAACCAACAACAACA
ACAAAGTTCTGCCTCATCTCAACAAAATGCTCAACAGATTTCTGCTGCTG
ACCTAGCAAATGCTCTATCCTTTGCTACAATGACACAAGAATTGTGAATG
AGTTTCCCAATTTGGCATTGGCGTTAAAGTTGGTTTTATCAAAGTTGAGT
GCTACTGATTCCATTGGACGAAGAGATTTATTACAAGATGGAGAAGATTA
TGAAGGCATTGACCCTGCTCGTTGTTGAGAGACTCCGATTTATCTGCGCC
AGTTTTAGAATCACTCACTCCTGAAAGTTAAAGAAATTTTTCCAAAAGAA
AGAAAACATAGAGAAGATTCTGAACGAGAACGAAAAGTTGAAAAATGATG
ATATTGTGGCAGCTGAAATGCGACCAACACCGAGCATCGATGAAATCTCC
TCATTGTTGGCTAAAGCCAAAAACCCTGCTTTCAAAACAATGAATTGTTG
TACCTTGGACAAATTTTGGAAGACGATGAAAAATCGTTACAATCATATGG
AGTACAAAATGAAACAACAATTTATTTGTTTAAAAAGTTGCCTGAGGAAG
AGCCTAAAATAAATGGCATCTCGATTGGTTGTGACTGATCCCTTTGCTAA
GAGCAAAAAGACAATTGATGAGATTGATTTAGCATCATCTTTGACCAATT
TCAAGAAGTCTGTCTACGTGGAATTTGGTGTCAAGGTTGAGGAGCAAGTT
CACAGCTGGTATAGAACAAATGAGAACCGAGTTTAATATCTCTGAAGACG
TGGCAAGAAGAGCTCTGGTAATGACCAACGGGAATGTGCAAATGGCTGTT
AACCTTGTTTTTGACGGATCTGTCAATTAAATCCTGCTACACCGAGTAGT
TTACCCTTTGGAAGTCCTGGTTCGCAACCCAATCGACAACCACAACCGGA
TTACCTAGCACAAGCAGAACTAATGGCGTCCAACGAAGCTGCTATTCAAC
AGAACCAACAACAACAACAAAGTTCTGCCTCATCTCAACAAAATGCTCAA
CAGATTTCTGCTGCTGACCTAGCAAATGCTCTATCCTTTGCTACAATGAC
ACAAGAATTGTGAATGAGTTTCCCAATTTGGCATTGGCGTTAAAGTTGGT
TTTATCAAAGTTGAGTGCTACTGATTCCATTGGACGAAGAGATTTATTAC
AAGATGGAGAAGATTATGAAGGCATTGACCCTGCTCGTTGTTGAGAGACT
CCGATTTATCTGCGCCAGTTTTAGAATCACTCACTCCTGAAAGTTAAAGA
AATTTTTCCAAAAGAAAGAAAACATAGAGAAGATTCTGAACGAGAACGAA
AAGTTGAAAAATGATGATATTGTGGCAGCTGAAATGCGACCAACACCGAG
CATCGATGAAATCTCCTCATTGTTGGCTAAAGCCAAAAACCCTGCTTTCA
AAACAATGAATTGTTGTACCTTGGACAAATTTTGGAAGACGATGAAAAAT
CGTTACAATCATATGGAGTACAAAATGAAACAACAATTTATTTGTTTAAA
AAGTTGCCTGAGGAAGAGCCTAAAATAAATGGCATCTCGATTGGTTGTGA
CTGATCCCTTTGCTAAGAGCAAAAAGACAATTGATGAGATTGATTTAGCA
TCATCTTTGACCAATTTCAAGAAGTCTGTCTACGTGGAATTTGGTGTCAA
GGTTGAGGAGCAAGTTCACAGCTGGTATAGAACAAATGAGAACCGAGTTT
AATATCTCTGAAGACGTGGCAAGAAGAGCTCTGGTAATGACCAACGGGAA
TGTGCAAATGGCTGTTAACCTTGTTTTTGACGGATCTGTCAATTAAATCC
TGCTACACCGAGTAGTTTACCCTTTGGAAGTCCTGGTTCGCAACCCAATC
GACAACCACAACCGGATTACCTAGCACAAGCAGAACTAATGGCGTCCAAC
GAAGCTGCTATTCAACAGAACCAACAACAACAACAAAGTTCTGCCTCATC
TCAACAAAATGCTCAACAGATTTCTGCTGCTGACCTAGCAAATGCTCTAT
CCTTTGCTACAATGACACAAGAATTGTGAATGAGTTTCCCAATTTGGCAT
TGGCGTTAAAGTTGGTTTTATCAAAGTTGAGTGCTACTGATTCCATTGGA
CGAAGAGATTTATTACAAGATGGAGAAGATTATGAAGGCATTGACCCTGC
TCGTTGTTGAGAGACTCCGATTTATCTGCGCCAGTTTTAGAATCACTCAC
TCCTGAAAGTTAAAGAAATTTTTCCAAAAGAAAGAAAACATAGAGAAGAT
TCTGAACGAGAACGAAAAGTTGAAAAATGATGATATTGTGGCAGCTGAAA
TGCGACCAACACCGAGCATCGATGAAATCTCCTCATTGTTGGCTAAAGCC
AAAAACCCTGCTTTCAAAACAATGAATTGTTGTACCTTGGACAAATTTTG
GAAGACGATGAAAAATCGTTACAATCATATGGAGTACAAAATGAAACAAC
AATTTATTTGTTTAAAAAGTTGCCTGAGGAAGAGCCTAAAATAAATGGCA
TCTCGATTGGTTGTGACTGATCCCTTTGCTAAGAGCAAAAAGACAATTGA
TGAGATTGATTTAGCATCATCTTTGACCAATTTCAAGAAGTCTGTCTACG
TGGAATTTGGTGTCAAGGTTGAGGAGCAAGTTCACAGCTGGTATAGAACA
AATGAGAACCGAGTTTAATATCTCTGAAGACGTGGCAAGAAGAGCTCTGG
TAATGACCAACGGGAATGTGCAAATGGCTGTTAACCTTGTTTTTGACGGA
TCTGTCAATTAAATCCTGCTACACCGAGTAGTTTACCCTTTGGAAGTCCT
GGTTCGCAACCCAATCGACAACCACAACCGGATTACCTAGCACAAGCAGA
ACTAATGGCGTCCAACGAAGCTGCTATTCAACAGAACCAACAACAACAAC
AAAGTTCTGCCTCATCTCAACAAAATGCTCAACAGATTTCTGCTGCTGAC
CTAGCAAATGCTCTATCCTTTGCTACAATGACACAAGAATTGTGAATGAG
TTTCCCAATTTGGCATTGGCGTTAAAGTTGGTTTTATCAAAGTTGAGTGC
TACTGATTCCATTGGACGAAGAGATTTATTACAAGATGGAGAAGATTATG
AAGGCATTGACCCTGCTCGTTGTTGAGAGACTCCGATTTATCTGCGCCAG
TTTTAGAATCACTCACTCCTGAAAGTTAAAGAAATTTTTCCAAAAGAAAG
AAAACATAGAGAAGATTCTGAACGAGAACGAAAAGTTGAAAAATGATGAT
ATTGTGGCAGCTGAAATGCGACCAACACCGAGCATCGATGAAATCTCCTC
ATTGTTGGCTAAAGCCAAAAACCCTGCTTTCAAAACAATGAATTGTTGTA
CCTTGGACAAATTTTGGAAGACGATGAAAAATCGTTACAATCATATGGAG
TACAAAATGAAACAACAATTTATTTGTTTAAAAAGTTGCCTGAGGAAGAG
CCTAAAATAAATGGCATCTCGATTGGTTGTGACTGATCCCTTTGCTAAGA
GCAAAAAGACAATTGATGAGATTGATTTAGCATCATCTTTGACCAATTTC
AAGAAGTCTGTCTACGTGGAATTTGGTGTCAAGGTTGAGGAGCAAGTTCA
CAGCTGGTATAGAACAAATGAGAACCGAGTTTAATATCTCTGAAGACGTG
GCAAGAAGAGCTCTGGTAATGACCAACGGGAATGTGCAAATGGCTGTTAA
CCTTGTTTTTGACGGATCTGTCAATTAAATCCTGCTACACCGAGTAGTTT
ACCCTTTGGAAGTCCTGGTTCGCAACCCAATCGACAACCACAACCGGATT
ACCTAGCACAAGCAGAACTAATGGCGTCCAACGAAGCTGCTATTCAACAG
AACCAACAACAACAACAAAGTTCTGCCTCATCTCAACAAAATGCTCAACA
GATTTCTGCTGCTGACCTAGCAAATGCTCTATCCTTTGCTACAATGACAC
AAGAATTGTGAATGAGTTTCCCAATTTGGCATTGGCGTTAAAGTTGGTTT
TATCAAAGTTGAGTGCTACTGATTCCATTGGACGAAGAGATTTATTACAA
GATGGAGAAGATTATGAAGGCATTGACCCTGCTCGTTGTTGAGAGACTCC
GATTTATCTGCGCCAGTTTTAGAATCACTCACTCCTGAAAGTTAAAGAAA
TTTTTCCAAAAGAAAGAAAACATAGAGAAGATTCTGAACGAGAACGAAAA
GTTGAAAAATGATGATATTGTGGCAGCTGAAATGCGACCAACACCGAGCA
TCGATGAAATCTCCTCATTGTTGGCTAAAGCCAAAAACCCTGCTTTCAAA
ACAATGAATTGTTGTACCTTGGACAAATTTTGGAAGACGATGAAAAATCG
TTACAATCATATGGAGTACAAAATGAAACAACAATTTATTTGTTTAAAAA
GTTGCCTGAGGAAGAGCCTAAAATAAATGGCATCTCGATTGGTTGTGACT
GATCCCTTTGCTAAGAGCAAAAAGACAATTGATGAGATTGATTTAGCATC
ATCTTTGACCAATTTCAAGAAGTCTGTCTACGTGGAATTTGGTGTCAAGG
TTGAGGAGCAAGTTCACAGCTGGTATAGAACAAATGAGAACCGAGTTTAA
TATCTCTGAAGACGTGGCAAGAAGAGCTCTGGTAATGACCAACGGGAATG
TGCAAATGGCTGTTAACCTTGTTTTTGACGGATCTGTCAATTAAATCCTG
CTACACCGAGTAGTTTACCCTTTGGAAGTCCTGGTTCGCAACCCAATCGA
CAACCACAACCGGATTACCTAGCACAAGCAGAACTAATGGCGTCCAACGA
AGCTGCTATTCAACAGAACCAACAACAACAACAAAGTTCTGCCTCATCTC
AACAAAATGCTCAACAGATTTCTGCTGCTGACCTAGCAAATGCTCTATCC
TTTGCTACAATGACACAAGAATTGTGAATGAGTTTCCCAATTTGGCATTG
GCGTTAAAGTTGGTTTTATCAAAGTTGAGTGCTACTGATTCCATTGGACG
AAGAGATTTATTACAAGATGGAGAAGATTATGAAGGCATTGACCCTGCTC
GTTGTTGAGAGACTCCGATTTATCTGCGCCAGTTTTAGAATCACTCACTC
CTGAAAGTTAAAGAAATTTTTCCAAAAGAAAGAAAACATAGAGAAGATTC
TGAACGAGAACGAAAAGTTGAAAAATGATGATATTGTGGCAGCTGAAATG
CGACCAACACCGAGCATCGATGAAATCTCCTCATTGTTGGCTAAAGCCAA
AAACCCTGCTTTCAAAACAATGAATTGTTGTACCTTGGACAAATTTTGGA
AGACGATGAAAAATCGTTACAATCATATGGAGTACAAAATGAAACAACAA
TTTATTTGTTTAAAAAGTTGCCTGAGGAAGAGCCTAAAATAAATGGCATC
TCGATTGGTTGTGACTGATCCCTTTGCTAAGAGCAAAAAGACAATTGATG
AGATTGATTTAGCATCATCTTTGACCAATTTCAAGAAGTCTGTCTACGTG
GAATTTGGTGTCAAGGTTGAGGAGCAAGTTCACAGCTGGTATAGAACAAA
TGAGAACCGAGTTTAATATCTCTGAAGACGTGGCAAGAAGAGCTCTGGTA
ATGACCAACGGGAATGTGCAAATGGCTGTTAACCTTGTTTTTGACGGATC
TGTCAATTAAATCCTGCTACACCGAGTAGTTTACCCTTTGGAAGTCCTGG
TTCGCAACCCAATCGACAACCACAACCGGATTACCTAGCACAAGCAGAAC
TAATGGCGTCCAACGAAGCTGCTATTCAACAGAACCAACAACAACAACAA
AGTTCTGCCTCATCTCAACAAAATGCTCAACAGATTTCTGCTGCTGACCT
AGCAAATGCTCTATCCTTTGCTACAATGACACAAGAATTGTGAATGAGTT
TCCCAATTTGGCATTGGCGTTAAAGTTGGTTTTATCAAAGTTGAGTGCTA
CTGATTCCATTGGACGAAGAGATTTATTACAAGATGGAGAAGATTATGAA
GGCATTGACCCTGCTCGTTGTTGAGAGACTCCGATTTATCTGCGCCAGTT
TTAGAATCACTCACTCCTGAAAGTTAAAGAAATTTTTCCAAAAGAAAGAA
AACATAGAGAAGATTCTGAACGAGAACGAAAAGTTGAAAAATGATGATAT
TGTGGCAGCTGAAATGCGACCAACACCGAGCATCGATGAAATCTCCTCAT
TGTTGGCTAAAGCCAAAAACCCTGCTTTCAAAACAATGAATTGTTGTACC
TTGGACAAATTTTGGAAGACGATGAAAAATCGTTACAATCATATGGAGTA
CAAAATGAAACAACAATTTATTTGTTTAAAAAGTTGCCTGAGGAAGAGCC
TAAAATAAATGGCATCTCGATTGGTTGTGACTGATCCCTTTGCTAAGAGC
AAAAAGACAATTGATGAGATTGATTTAGCATCATCTTTGACCAATTTCAA
GAAGTCTGTCTACGTGGAATTTGGTGTCAAGGTTGAGGAGCAAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_002125XLOC_002125Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00003813-exon-sc0000031-1575043694:653596..653789TCONS_00003813-exon-sc0000031-1575043694:653596..653789Clytia hemisphaericaexon
TCONS_00003813-exon-sc0000031-1575043694:651725..651844TCONS_00003813-exon-sc0000031-1575043694:651725..651844Clytia hemisphaericaexon
TCONS_00003813-exon-sc0000031-1575043694:650488..650567TCONS_00003813-exon-sc0000031-1575043694:650488..650567Clytia hemisphaericaexon
TCONS_00003813-exon-sc0000031-1575043694:650155..650239TCONS_00003813-exon-sc0000031-1575043694:650155..650239Clytia hemisphaericaexon
TCONS_00003813-exon-sc0000031-1575043694:649632..649689TCONS_00003813-exon-sc0000031-1575043694:649632..649689Clytia hemisphaericaexon
TCONS_00003813-exon-sc0000031-1575043694:648755..648884TCONS_00003813-exon-sc0000031-1575043694:648755..648884Clytia hemisphaericaexon
TCONS_00003813-exon-sc0000031-1575043694:646267..646420TCONS_00003813-exon-sc0000031-1575043694:646267..646420Clytia hemisphaericaexon
TCONS_00003813-exon-sc0000031-1575043694:645542..645612TCONS_00003813-exon-sc0000031-1575043694:645542..645612Clytia hemisphaericaexon
TCONS_00003813-exon-sc0000031-1575043694:642877..643162TCONS_00003813-exon-sc0000031-1575043694:642877..643162Clytia hemisphaericaexon
TCONS_00003813-exon-sc0000031-1510915933:653596..653789TCONS_00003813-exon-sc0000031-1510915933:653596..653789Clytia hemisphaericaexon
TCONS_00003813-exon-sc0000031-1510915933:651725..651844TCONS_00003813-exon-sc0000031-1510915933:651725..651844Clytia hemisphaericaexon
TCONS_00003813-exon-sc0000031-1510915933:650488..650567TCONS_00003813-exon-sc0000031-1510915933:650488..650567Clytia hemisphaericaexon
TCONS_00003813-exon-sc0000031-1510915933:650155..650239TCONS_00003813-exon-sc0000031-1510915933:650155..650239Clytia hemisphaericaexon
TCONS_00003813-exon-sc0000031-1510915933:649632..649689TCONS_00003813-exon-sc0000031-1510915933:649632..649689Clytia hemisphaericaexon
TCONS_00003813-exon-sc0000031-1510915933:648755..648884TCONS_00003813-exon-sc0000031-1510915933:648755..648884Clytia hemisphaericaexon
TCONS_00003813-exon-sc0000031-1510915933:646267..646420TCONS_00003813-exon-sc0000031-1510915933:646267..646420Clytia hemisphaericaexon
TCONS_00003813-exon-sc0000031-1510915933:645542..645612TCONS_00003813-exon-sc0000031-1510915933:645542..645612Clytia hemisphaericaexon
TCONS_00003813-exon-sc0000031-1510915933:642877..643162TCONS_00003813-exon-sc0000031-1510915933:642877..643162Clytia hemisphaericaexon
TCONS_00003813-exon-sc0000031-1491911889:653596..653789TCONS_00003813-exon-sc0000031-1491911889:653596..653789Clytia hemisphaericaexon
TCONS_00003813-exon-sc0000031-1491911889:651725..651844TCONS_00003813-exon-sc0000031-1491911889:651725..651844Clytia hemisphaericaexon
TCONS_00003813-exon-sc0000031-1491911889:650488..650567TCONS_00003813-exon-sc0000031-1491911889:650488..650567Clytia hemisphaericaexon
TCONS_00003813-exon-sc0000031-1491911889:650155..650239TCONS_00003813-exon-sc0000031-1491911889:650155..650239Clytia hemisphaericaexon
TCONS_00003813-exon-sc0000031-1491911889:649632..649689TCONS_00003813-exon-sc0000031-1491911889:649632..649689Clytia hemisphaericaexon
TCONS_00003813-exon-sc0000031-1491911889:648755..648884TCONS_00003813-exon-sc0000031-1491911889:648755..648884Clytia hemisphaericaexon
TCONS_00003813-exon-sc0000031-1491911889:646267..646420TCONS_00003813-exon-sc0000031-1491911889:646267..646420Clytia hemisphaericaexon
TCONS_00003813-exon-sc0000031-1491911889:645542..645612TCONS_00003813-exon-sc0000031-1491911889:645542..645612Clytia hemisphaericaexon
TCONS_00003813-exon-sc0000031-1491911889:642877..643162TCONS_00003813-exon-sc0000031-1491911889:642877..643162Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00003813-proteinTCONS_00003813-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000031supercontigsc0000031:642877..653789 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
148.648 146.917 83.4138 75.1522 69.6178 53.4523 105.675 121.847 113.199 106.318 114.211 106.119 71.9055 69.4527 90.4154 102.25 109.83 122.883 48.7669 54.6558 76.4624 76.4562 110.952 106.329 123.589 115.949 84.8436 63.2225 74.4881 69.5984
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR000626Ubiquitin_dom
IPR029071Ubiquitin-rel_dom
IPR009060UBA-like
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00003813 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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