TCONS_00003811 (transcript) - C. hemisphaerica

Overview
NameTCONS_00003811
Unique NameTCONS_00003811
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length806

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00003811 ID=TCONS_00003811|Name=TCONS_00003811|organism=Clytia hemisphaerica|type=transcript|length=806bp
aaaatactaaaaaactttaaaaaataaaacaccAAAATATATTATGGGTC
CCACACAGCCGAATCAATctacaaagaaaaacaagagaAACTTATCTATC
AGAGAACGTATACAAATAGGAATCGAAAATGATAACGGATTTGCTGTTCG
ACAGTGTCAAGAGTTAGAGGAATGGTTACTAGCGAAATATGAGGCTTGGG
ACGAGGAGCCGCCACTGAACGTCGAAATGTGTGATCACGAATTCGAAAAA
CTTCTAAGAATAATGAAACAGAATAAAGAAATGGACAGGCTGGCGAAATT
AAGGATTGAAGAAGCCAAACAACTCAAGTTTGAATATGAATCCGAAGGAG
CGCGTCTACAGAACATCCTGGATTTTGTTGGCCTTCCTGCCCATGTTTTG
TCCAGTGCTGGTAAAGCTAGTCTCAAGAACTTAACAGACCTGGCGTCCGT
GTTGAAGATCAAAGACGCCCAAGAATCGACTTACTGTATATCATTGTTAC
GCTTGAAGGAGGAAATGGAACGCACGGAAGAAGAAatcattgaaaaagaa
aaagatgtcgaaaagtTGAATCACAAACTCATCACTTGTAAGGAGAACTT
GAAGCAGATTAACGActtttatcAGAACAAGAATGAAGCATCACATGTAA
ACATACCCTtattacaaaaacgtcaaaaagaaacACACTCGATGCATCAG
AAATGTGTGAAGTATGAAGAACAAATGTTTGAGATGAAGgAACAAGAAGA
TGTCATacggaatttcaaaaaatttcatcacGAAACTCTTGTACAACTTC
ATCAGG
Run BLAST on NCBI

protein sequence of TCONS_00003811-protein

>TCONS_00003811-protein ID=TCONS_00003811-protein|Name=TCONS_00003811-protein|organism=Clytia hemisphaerica|type=polypeptide|length=254bp
MGPTQPNQSTKKNKRNLSIRERIQIGIENDNGFAVRQCQELEEWLLAKYE
AWDEEPPLNVEMCDHEFEKLLRIMKQNKEMDRLAKLRIEEAKQLKFEYES
EGARLQNILDFVGLPAHVLSSAGKASLKNLTDLASVLKIKDAQESTYCIS
LLRLKEEMERTEEEIIEKEKDVEKLNHKLITCKENLKQINDFYQNKNEAS
HVNIPLLQKRQKETHSMHQKCVKYEEQMFEMKEQEDVIRNFKKFHHETLV
QLHQ
Run BLAST on NCBI

transcript from alignment at sc0000031:630473..642216-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00003811 ID=TCONS_00003811|Name=TCONS_00003811|organism=Clytia hemisphaerica|type=transcript|length=11744bp|location=Sequence derived from alignment at sc0000031:630473..642216- (Clytia hemisphaerica)
AAAATACTAAAAAACTTTAAAAAATAAAACACCAAAATATATTATGGGTC CCACACAGCCGAATCAATCTACAAAGAAAAACAAGAGAAACTTATCTATC AGAGAACGTATACAAATAGGAATCGAAAATGATAACGGATTTGCTGTTCG ACAGTGTCAAGAGGTGAGCACTACAAGATTTGAAAATGAAGATTGGAATA CTTTTTTATAAGCAAGTGTCTGCCCGTATATCAGGCTCGCATTATACTTA GCATTCTATTGTATTCAAACAATAGAGCCATTGCTTTAGGTACCAAAAAC TGAGCCTGCATATACTTATGAACGTTATGCTTACAGAAAAAAAAACATGT AGTTCCAGTGAGATCAAGAAAATGAGAGTTGTTTGAGTAAGATAAGTAAC AAAAAAGTAGAATTTACACTCATCTTGAAAAGCTCGAGTTTGCAAGTTCC GTTTTTACACAAAATTAATGCTCAATTAAAACTGCGAGGAGCTCGAGGAA ATAAATTACTGTATATTTTTGAGTAGGTTCGAACAAAAATAGGTTAGGGA AATCCTCTAGATATCATAATTATTTTTCATGTTTGTTGCTTGTTACGTCC ACAATTATGGAAAGAAAACGTTCCATTTGTGTAAGGGATCGCCTCTACAT ATTCGAACCGTTTGCTTCCATAATGGCGGAACAGACAAACATGTAAACAC AAAGTGATACTTTATCATCTATATTTCTGTCTTTTTCTTAGTTAGAGGAA TGGTTACTAGCGAAATATGAGGCTTGGGACGAGGAGCCGCCACTGAACGT CGAAATGTGTGATCACGAATTCGAAAAACTTCTAAGAATAATGAAACAGA ATAAAGAAATGGACAGGCTGGCGAAATTAAGGATTGAAGAAGCCAAACAA CTCAAGTTTGAATATGAATCCGAAGGTTTGTTCAGTGTTGAAAGTAAAGT TGACTCTCTCTCTAATTCGATCTTCAAGGGTCCCAAAATTTTATTCGAAT TAGAGAAAGATTCGAATTACAGAGATTAATTTAAACCACTTTTGAGCTTA GGGGACCAATATTTTATAGTTCGAATTACAGAAAGATTCAAATAATAGAT GTTCGAATTAGAGAGAGTTGAGAGAGTACTTCTGGCTAAGGTGAACTTGG TCAAAAAGTCCGGAATTGTTACCATTGTTACTAACTTTCTTTAAAGATTC TTTTCTTAGTCCTTTCTTTGAGTCCTTTTCTTTGATTTGCGTACCTCTTC TTTTATACAGTTAAGTCTCCCTAAGTTGAACACGCACGGGCACACAAACT TGTTCAAAGGTTAATGAAATTTCGAGCTATGAAGTAAGGTTTATTTTACA AGGGATTGCTAAATGAAGGGACCACATGAAACTTGTTCGATTTAAGGAGA CATTCAAGTTATAGAGGATCGAATTATGGAAACTGCACTGTATTTGACAT TTTTCTCCTCCCTCTTTTTATTTTATTTTTATGGTATAGCTTTATCATTC CGTTTTAGAATAGATACAGTTTTTTTCTGGAAATTTGCCTAAATCAACAA TTGAATTTTCTTTAGGAGCGCGTCTACAGAACATCCTGGATTTTGTTGGC CTTCCTGCCCATGTTTTGTCCAGTGCTGGTAAAGCTAGTCTCAAGAACTT AACAGACCTGGCGTCCGTGTTGAAGATCAAAGACGCCCAAGAATCGACGT AAGATATTTCCTACTTGGACCATTTTACAGATTGGGCCATTCCTTTAAAC GACCGGCTTACTGCCCTGCCTGTTTTGATAATTAGAGTAGGCATAATCGG CAAAAAGTTGGCAGCTTCAATCTTCGTTTTGAACAAGATTAAAAGAAGTA ATTGCGTCAACACCAAAACAGGGCAATGTATCGACTTTGGACAATCACTT TAACCGGGGGAGGCACTTAGGCAAAATTAGGTACGGGGGACGTGCCACCA AAGACAGGGTTCCTTGAGATATCTCACAGGGTCCCAAATTTACAAATTTT CAAGATGTGGACATGACTGGGTCGGTTTTTGGTCTTTGGACAATTTTCAG GGTGGAAAACTTTTTAATTTTTCGTCTACTCGAAGTAATTTTTGCCACTC TTCAGGATTACAATGGGAAGATTTTTCGATTTTTCGTTCTGAAAGGGTCC CAAATTTACCAAACATTCATACCTGACAGGGTCCACTTTTCAAACTACAG TGGCACGTCCCCGTCGGTCGTCAAGGTCAGTGCCCCCCGGGCACTTTACC CGCCAATTTTGAAGGTCATTTTAAAATTTAATGAGATTTTCTGTTTAAAA ATGTTCTCACCCAATCAAAGATTTTGCTTGGGCAGAATAAAGAAACTGTG TTCAGGGTATAAGTCAGTGATAGCACCCATCCACGTTTTTTATAAGAACA TCCAAAAACTTTCAGTTTCAGCCCTAAAATATTTTATCATTTACCATTTT CACTATTTTTGTTGGTAGTTCTATCGATTTTCCTAGGAAATCAGGTGTTT TAAAGTTTGCTAAGCCTTAAATTGTTCTTAAACTTGTTTTTAATATTTTG GCCATTAAACCCTTTATGTTCTTACATGGTTTGTTCTAACATAGAGGTAA TAAAAGTTGTTTTTATTACGTCCATGGTTCTAATAAAAAAGAAAGTGCAA TGTACTTAAAAAACGTTTTCACTTTTCGTTTCATTAGTTACTGTATATCA TTGTTACGCTTGAAGGAGGAAATGGAACGCACGGAAGAAGAAATCATTGA AAAAGAAAAAGATGTCGAAAAGTTGAATCACAAACTCATCACTTGTAAGG AGAACTTGAAGCAGATTAACGAGTAAGTTGTTTTAAAGGTTTTATTTCTA CATAAAGTGTTCCTGTTTCATATCAGACACATATCTCATATCAGGACAGT GTCTGCCTATTGTTATATTATGCTAATATAAGCAAAAAAAAAATTTTTGT TTTTCTTATCCTCTTTCTGACCAATCTTGCTCCACATCCGTGTCAATCCA GTGTGAAAAAGCTTGTGAATTAAAATTGATGAGTAAGCAAACAATATCAC TCTTATTTAAAAACAAAACCTTAAGTTTATAATGACAATATATTGTTGGC GGAGTGTTATGTACTATGTCAACACTTTTTAAAAATAGGCACTCTATTAT ATATATAAAGGAATTTTCTCTCTGGGAACCATCCCCATATTATATTGTTG AAATGTTGCATAACATGCCGGCAATATATTGCGGATGCCTTTTCAACATT TCAACTTATCAATATATTGTGTAAGTGTATGTAGATAAAATAAATTTTAG GTAAGTTGTTTTCTTTGTTTATAATTGGTACGCACCCTTTGTAATGAAAA TAATCCTGTAAAAGCGCGCGGCTGAAATTCGGCGACAAAATACTTCGAAC AGCATAAGCTTCTAAACGTATTGAGAACATCTTAAGAACAGTTGAAATTT TGGATGATTTAATGACCGAAATGGCGCGCGTCTGAGCTGAAGATTACCTG GTAGTAATTTTTTAATATAGTAATTTTTTTTTGAATGTTGTAAATTGAAA TTCGATTTGATTTTTTTTTACTAACTTGTGATCATGGTGCAAAGAGGACA CCGAAACGTCAAATATAACAATAGCGTTCAGCTTGAGGTCGTTGTTGTTA TTTTCTGCCCGCGTAGTTTGATTATTCGCCCGATAGTGTCATTTCGCAAA TGGCACTAGAGGGCCAATAATCAAATTGCAAGGGCAGAATTAATGACATC AACGAACGAAAACTTAACGCTATTACTACCGGGTGACCCACGAAAAAGTT CAGACGTTTCGCAATACGTATTTCAGTTCGAAGATTTTGGTGACAGAGAA GGTGCTCGGTATGTATTTTTTCCTTATTGGGACTCATCAGGACACTGTTT ACTTCACCGTTAGCCGACCAGATCGATTTAGCCAGCATCTCTAAACCACA ACATCACGCGTGGTTAAGATTGAGAGAAAAAGCGAACGGACGGGAAATTC CCCACGGAATTCTTTATTGACTCCTTTGGAGCCAAACTTTACTGTCTCAA AAGGGAGTATGTTTCAATTGAGGCTAAAACTCATCATTGTCTATTCATCT GAAGCTTTGTTAGTTGAATTCTGATCCTCCTTACGGGCGTCAACTTCTTG GTGTGTCGAAAATATATTTCCAACGAAACTGGCAAATTTCCCATCCATCT TGTAAAATAGAACAGGGATTATACTGAAAATCAATGTCGAAAGTGCATGA CAAATCGCACCAACCGTTTGAAAAACTTGATGTGTCGGCTGTGTGAAGAT GAAAAGGCGTGACACGCCGTATGGCACCCAACCGATGGTGAACAAATACC ATAAGAAGTGGGTGGCTTCGATACGGGCCGTGTTTGTACGGCGTTTTATT TGAAGAGCATTATTCGCTCGTTCGTCTCCCGCTTTGATGATTTTTTTTAT ACCTTTAGTTGTAATTCCGATGGCGACATTTGTAAACGTCGTAACCATAG TAACCACAACCGTTGTTACCATAACAGCGCACGGCTTATCGAGGTGACAT TCAATTTTCGCATCCACCACAACGACATTACATTGGGTATCATCCGTCTC GAAATATCTCCATAATTCCCATGTGATTGGCACTAGGGAGATAATTCCTG CTCCCACAGAGACTGCAATGTAAAGGCGGATATGCTTTGTGAAACCGTCG ATGTCTTGATTCTTGAACTTGATGTACCGGTGTAACAGCATTGCGGAGAT GATGAGCATGTTGACTAGGCTGGACATGAAGTGAGAGAGATAAGAGACCA AGCGAATGATAATGCACCTCAAGCGTGACGCGAAAGAGAAGCGAACCAAT AACGTGTACCATTCCATAGGCATTCCTGTGGAACAAAATAAAACACAAGA TCTTCTAATGATATTTCAGACTTGAAAATTATGTGTTGAGACAGGCCCGG CGGAACAACTGTAAAAGTGGGGAGGCTGAAGGCTCAAATGGGATAAAATT CACTAGAAATTTGAGAAAAAAACCTCATTTGCTCAAAAGTTGGGAGGATA AAGTCTCCCTAGTCTCCCTGCTTCCCCTGGACTGTGAGAGCAGTGCGGCC TCAACACTGGAAAAGAACTTGTAGGAATTTCTTAGTCGTACTATGCACAT TGTTTTTTTTATGTTTTGAACAGGTCATTGCCTCTTGCTTTAGAGTAGAA GGTGTCCAAGGCTAGTAGATCTACTGGACAGTATTGGAGATTTAATTCCA CTGGATAGCGACGCTGGTTTATTAGACCGATCAGCCTCTGCACTCTTTGT TTGACAAGTAACACCCTTCTATCTCGAAAAAGGAATGAATGATGACTAAG TGGTCAAAGACTTCAGCGTCTCAAACCAGGGGTTCTTGGTTTGGATCCCC ACTCCTTCTAGTGTCCCGTTCAGTTTAAACTGAGCTGGCTGGCCGTTGAT CCCTTGAAAACAATCGAAAAACTTTCTAAAAAGTCATAGATTACTGGGCT GGGCTATCCACGTAAAATATCGACTCTATCTACCTTTTTACGCCGGCCCC TATTACGCCAAAACTCATTTCTTTTCGTTTCTAGCTGGGTTTTAATTTAA TTCTAATTTCCCTTACGTCGGCTCTTAATACACCAGCGACGACAAAATAA CGCCAATAAGGGCCGGCGTAAAAAAGGCCGATAAGAGACGCCGTAAAGAG ATAATTGTTGACTCACCGAGAAAAACTCCAACCATTGTTATTCTTACAAC CATTTGTATGAAGGGCGTTGTTGGACCATTTTCATTCTTAATGTATCGGT AAAGAGTGGTTAAACCAATGGCAGAGAAGATGAAATTGATTGGATAAAAT GATAAGAGTGTTGCTCGAGCGATGTTGTCGATGAGTGGTCTTGTCGAATT AGTTGGATTGTCCAATACAATGGAATCCATCGTTTTCAAGTTGTTTAAAA TCGTTGAGATTGTTGAAGTATTATTCATCCTGTTCGTTTCTGCTGCCCAA TTATGTATGGTCAAAAACACGGCTTATCTGTACAGTTCAGATTTTCCACT TAGATTTCCGTCCAGTCGTTGTAAGCCTTCGGTGAACGAAAATGTGTAAA ACGTCTGTCAATATTCCTCAAAAGTGGTTGCAACACTGTACCATTTTGTC GAAAGTTTTGTTTTTAACTCCCTCTCTCTATACATTGCCTTATGCAATTG ACGTTTTTTTTCTTCACGTCGACACTTTCTTTTGATTGTCTTATCTTTTT ACAGTCACAATTGAAAATGTTCGGCTAAAAAAATAAAGAAAGATAGGTTA ACCCAATTTCCTCACTTTTACTAAAGATAACAATCTTTTGCGGAAAGAAA TATTTTCCAGGAGAAAAACACCCGCTATCTTAAACAAGCTTAATTTGTCC TATTTCTTTCTTTTTCACTTACAATAAAAACAACATACAGATTTAATAAC AGAAGCTGTTTTTGGTTCATTTTGAAATTTATTTCTATTTTAAACNATAC TGATTTAATAACAGAAGCTGTTTTTGGTTCATTTTGAAACTTATTTCTAT TTTAAACGTTTCGGCCTCAACAGAGTAAAACGGACAAAAACAGCCACGTT TTGAGACATTCCTTAGAGCGCTGTCACAATAGTACAGTGAAGCTAGAGAA TTTCAATACGTTGGGAAATAACTTTTACACAGAGACACAAAGAAAAGTTA GCGAGGCATTCTTTATTAAAAGTCAATGCTCACGATAAATCTTGTTGGTG TCTATATTTGTAACACGCTTGAATCCGAACTCTCCCATTCTCGCATGAAG CTTTTTCGCTAGCGATTCTGAGGCACACGGCAATGCTTTTAGCGCCTTTT CTGTATTGATCTTTCAATCGGTCAATTTTCAGCCTTCAAATGAAAACCGT GAAAACATCTTTTTCCTTTTTTTAACCTTCTTTTTTGAGTATGTTTCAAT TGAGGCTAAAACTCACCATTAGCTATTCATCGGAAGCTTTGTAAGTTGAA TTCTGATCCTCCTTATTACGGGTGTCAACTTCTTGGTGTGTCGAAAATAT ATTTCCAACGAAACTGGCAAATTTCCCATCCATCTTGTAAAATAGAACAG GGATTATACTGAAAATCAATGTCGAAAGTGCATGACAAATCGCACCAACC GTTTGAAAAACTTGATGTGTCGGCTGTGTGAAGATGAAAAGGCGTGACAC GCCGTATGGCACCCAACCGATGGTGAACAAATACCATAAGAAGTGGGTGG CTTCGATACGGGCCGTGTTTGTACGGCGTTTTATTTGAAGAGCATTATTC GCTCGTTCGTCTCCCGCTTTGATGATTTTTTTTATACCTTTAGTTGTAAT TCCGATGGCGACATTTGTAAACGTCGTAACCATAGTAACCACAACCGTTG TTACCATAACAGCGCACGGCTTATCGAGGTGACATTCAATTTTCGCATCC ACCACAACGACATTACATTGGGTATCATCCGTCTCGAAATATCTCCATAA TTCCCATGTGATTGGCACTAGGGAGATAATTCCTGCTCCCACAGAGACTG CAATGTAAAGGCGGATATGCTTTGTGAAACCGTCGATGTCTTGATTCTTG AACTTGATGTACCGGTGTAACAGCATTGCGGAGATAATGAGCATGTTGAC TAGGCTGGACATGAAGTGAGAGAGATAAGAGACCAAGCGAATGATAATAC ACGTCAAGCGTGACGCGAAAGAGAAGCGAACCAATAACGTGTACCATTCC ATAGGCATTCCTGCGGAACAAAATAAAACACAATACCTTCTAATGATTCT TCAGACTTGAGAATTATGTATGGGCCGATAAGGGACAGTGTAAAAAGGAC CGATAAGGGACGGCGTAAAAAAGGCCAATCAAAGACGGCATAAAATGGAG TGGCGTAAAAAGGGCCGATAAGATCATTTTTAACTCACCGAGAAAAACTC CAACCATTGTTATTCTTACAACCATTTGTATGAAGGGCGTTGTTGGACCA TTTTCATTCTTAATGTATCGGTAAAGAGTGGTTAAACCAATTGCAGAGAA GATGAAATTGATTGGATAAAATGATGTTGTCTGTTGCTCGTGCGATGTTG TCGATGAGTGGTCTTGTCGAATTAGTTGGATTGTCCACGACATCAGAATC CATCTTTGTCAGGTTGTTTAAAATCGTTGAGATTGTTGAAGTGTTGTTCA TCCTGGTCGTTTCTGCTGCACATTTCTGTACGGTTTGTCCGTACAGTTCA GATTTTTCACTTAGATTTCCGTTCCTTCGTTGTGAGCCTTCGGGGAACGA AAATGTGTAACACGTCTAATATCGAACGTTCTGCCAATATTCCTCAAAAG TGGTTTTAACACTGTACCATTAATTTTGGGGAAAGTTGTGTTTTTAACTC TCTCTAAACATTACCTTATGCAATTAATGTTTTCTTCACGTCAAAACTTT GTTTCGTTTTGATTGTCTTATCTTTTTGAAAAGTTACAATTGACAATTTT CGGGTAAAAAAATAAAGAAAGATAGGTTAACCCAATTTCCTCACCTTTTA CTAAAGATCTTTTGCCAAAATAAATATTTTCTAGGAGACAAACACCCGAT ATCTTAAACAAGCTTAATTTGTCCTATTTCTTTTTCACTTACAATATAAA AAAAAATATACTGATTTAATAACAGAAGCTGTTTTTGGTTCATTTTGAAA CTTATTTCTATTTTAAACGTTTCGGCCTCAACAGAGTAAAACGGACAAAA ACAGCCACGTTTTGAGACATTCCTTAGAGCGCTGTCACAATAGTACAGTG AAGTTAGAGAATTTCAATATCTTAGGAAATAACTTACACAGAAACACAAA GAAAATTCAGTGAGGCNAAAATGGAAATTAAAAAGTTTTCTTTTACAAAC TTGCACATTTTGCCGATAGCTAATTTTCATTACAACAATTTTTTTTACTG ATGATGGTATTCTGTTGAGACCGAAATGAACCAGAAGCAGCTTCTGTTAT TAAATCTTTTACTCGAGATGTATGGAAGGATTGATTTATTTCATTTATTT AAAAAGTTTTTGGCTTAAAAATGACGAAAAACCTAGGCTCAGTTATTGGT TCTTGAAAAAAAATATTCAGAAAACCGAATAAGTCAGTCAAGTCTTTTTT CTTGTTTTTCGTTTCCCCGGTGGTTTCTTTTTGCTGCTAACAAAACAGAT TTTTTATTAAACTAAAACCAGCGACTAAAGTTTCGTTCTGACAACATTTT CAGTCAAATATTTAATCAAATTTCAAGTGAAAAATATTGGTCGGCTCTTC TTGAGCCGTTTTAAGTTGGACGAATTTTCATTTTTCTTTATATGGTGGGT CAAACCGACAAAAATGAAAAAAAATCTTCAGTTTTGTTTTTATATCTCAT ATATTTTCATCCCGTTTCTTAGTGAGTTCCACTTTGATGATTTTCGAAAA ATAGAAGCCTTTCAAGTGTCCTGACCTAATTCAATTTTTTTGCTACTGCA GAAGCTTCGAAAGTTTAAAGAAAAAAAATCTTCAGTTTTGTTTTTATATC TCATATATTTTCATCCCGTTTCTTAGTGAGTTCCACTTTGATGATTTTCG AAAAATAGAAGCCTTTCAAGTGTCCTGACCTAATTCAATTTTTTTGCTAC TGCAGAAGCTTCGAAAGTTTAAAGAAAAAAAATCTTCAGTTTTGTTTTTA TATCTCATATATTTTCATCCCGTTTCTTAGTGAGTTCCACTTTGATGATT TTCGAAAAATAGAAGCTTTTCAAGTGTCCTGACCCAATTCAATTTTTTTG CTACTGCAGAAGCTTCGAAAGTTTAAAGTGACGTCAAAAATGGAATGTTT AGAGCCCGAAAACCTGGGATCAAAACATCCGAAAAAGTCGCAAAGTGGAA TAGACGTTAATTGCGTAGAAAAAACGCGAATGACGTCTAGTATAGTCTGA GTTTCTCTCTTTTTCTGCTTTAATCTGATAGCGTGAAAACAGCCCGGTCA TTCATACACCCATTAAGGGCGATCTCCACTTTTGCGCGAAATCCGTTACG TCAATGGACCAATGGAATTGCTTCATTTTTCAGGCCGACCAATGACCTTA CAAAAACGTCAAAAAGTTTTCGCTCATTTTGCGCGAAAGTGTAGACCGCC CTCTACCACAGCGGGTGTCGTATTAGCGAGATTATGTATCTGGAATTCTC TACGGCTACGGCTAAAGCGGCGAGAGAAATGGCGAGTAAGGCAAGTAATG ACGGGTGAAAGCAAGTTCGATATTTGACGTACTGCATTATGTCGACTTTG GCTATACGGGGTTTTTATGTTTTTCCCGTACAGAGCAAAGTAGACAACGA CATGTCGCCTTTGGTGACGACCCGCATGGGCAGCCCCGCAACCGTAGCCG TAGAATATCTCCGATACATAATCTCGCTATTTATTCTTGGTAACTGTTTA TTTTATGCAGTCTGTCAAGTATTTGCGCAATGCAATTGTTTCTTTTTGAA ATGCAATTGTTTCTTTTCGCAATGCAATTTTTTCTTTTCGCAATGCAATT GGTTTTTTTGAAATGCAATTGTTTCTTTTCGCAATGCAATTTTTTCTTTT CTCATAAAACGACGGGCTTACATAGCACGGAGTTGCCCGTCGCTAAGAAA CGTCAGTTGTGACGTCAGTTTTTTCATAGGAAATAGACACGCCCAAGTAT TTTTTCTCTTTATTTTTAAAGCTTTTATCAGAACAAGAATGAAGCATCAC ATGTAAACATACCCTTATTACAAAAACGTCAAAAAGAAACACACTCGATG CATCAGAAATGTGTGAAGTATGAAGAACAAATGTTTGAGATGAAGGTAGA TATCTGATATCTTATATGAAACATTAGATGACATATCTGTAAGCATAGTT TTGAGGGGGCTGGAGGCTTGGAAAAGTCTAATAAGGGGTGGTTCCTGAAT ACACCCTTGTAACACATCCTAAGAATTGAATAGAAAAAAATGCACTCCAA AACCATCCACAGGATTCTTGCTTTGAGAGCGATAGAAATTTTCATACCCC TTGCGGAAAGAAGTTCCACCGAGGCTGTGAGACAGGGGTGTTCAGAAAAA AACCCTCTTACGGATGTGGAGAAAGGGAGATCCCTATGAAGAAACTTGAC AAGCGAGAAAGTCTTGGGCATCGGATTTTTCCAGGTTGAGGAGGAGTTGG ATATGAAAATTTCTTACTTAGTTACAGATTTCGATAAAGCGGTAAGCTCT AATTTTAGACGGCCCACTTTTCGCCCTGCCTTTTCATGATATGCACCACT GGAGAGTTTTCTGAGAACTTTTAAAATTTTCCACCCAATACGTCACTTAA AAACAATATGTGAAAAAGTGATGTATTAGGTGGAACAAAAACAGAAAATC TGCATAATTTCGTGAAGTCATTACAGTGGTGCATATCATGAATAAGTCAC CTGTCTAAAATCAATGCATAGCCCTCTTTTCACGTCAATACAATGTCTTC TTTCAATCTTTTTCAAGCAAAGATTTGACTGCCCTCTTTTTGGCCTCTTT TTGCCTACTCTATCAATTAGAGTAGCAGGGCAGAAAATCGGCCGTCTAAA ATAGAGCTAATGAGGCTTCGTGAAAAGTCAAAAGGATAACTTTTTTCAAT CCAAAAGAACAATATTTTTCTTTCTAGGAACAAGAAGATGTCATACGGAA TTTCAAAAAATTTCATCACGAAACTCTTGTACAACTTCATCAGG

Coding sequence (CDS) from alignment at sc0000031:630473..642216-

>TCONS_00003811 ID=TCONS_00003811|Name=TCONS_00003811|organism=Clytia hemisphaerica|type=CDS|length=4572bp|location=Sequence derived from alignment at sc0000031:630473..642216- (Clytia hemisphaerica)
GAACAAGAAGATGTCATACGGAATTTCAAAAAATTTCATCACGAAACTCT
TGTACAACTTCATCAGCTTTTATCAGAACAAGAATGAAGCATCACATGTA
AACATACCCTTATTACAAAAACGTCAAAAAGAAACACACTCGATGCATCA
GAAATGTGTGAAGTATGAAGAACAAATGTTTGAGATGAAGTTACTGTATA
TCATTGTTACGCTTGAAGGAGGAAATGGAACGCACGGAAGAAGAAATCAT
TGAAAAAGAAAAAGATGTCGAAAAGTTGAATCACAAACTCATCACTTGTA
AGGAGAACTTGAAGCAGATTAACGAGAGCGCGTCTACAGAACATCCTGGA
TTTTGTTGGCCTTCCTGCCCATGTTTTGTCCAGTGCTGGTAAAGCTAGTC
TCAAGAACTTAACAGACCTGGCGTCCGTGTTGAAGATCAAAGACGCCCAA
GAATCGACTTAGAGGAATGGTTACTAGCGAAATATGAGGCTTGGGACGAG
GAGCCGCCACTGAACGTCGAAATGTGTGATCACGAATTCGAAAAACTTCT
AAGAATAATGAAACAGAATAAAGAAATGGACAGGCTGGCGAAATTAAGGA
TTGAAGAAGCCAAACAACTCAAGTTTGAATATGAATCCGAAGATGGGTCC
CACACAGCCGAATCAATCTACAAAGAAAAACAAGAGAAACTTATCTATCA
GAGAACGTATACAAATAGGAATCGAAAATGATAACGGATTTGCTGTTCGA
CAGTGTCAAGAGGAACAAGAAGATGTCATACGGAATTTCAAAAAATTTCA
TCACGAAACTCTTGTACAACTTCATCAGCTTTTATCAGAACAAGAATGAA
GCATCACATGTAAACATACCCTTATTACAAAAACGTCAAAAAGAAACACA
CTCGATGCATCAGAAATGTGTGAAGTATGAAGAACAAATGTTTGAGATGA
AGTTACTGTATATCATTGTTACGCTTGAAGGAGGAAATGGAACGCACGGA
AGAAGAAATCATTGAAAAAGAAAAAGATGTCGAAAAGTTGAATCACAAAC
TCATCACTTGTAAGGAGAACTTGAAGCAGATTAACGAGAGCGCGTCTACA
GAACATCCTGGATTTTGTTGGCCTTCCTGCCCATGTTTTGTCCAGTGCTG
GTAAAGCTAGTCTCAAGAACTTAACAGACCTGGCGTCCGTGTTGAAGATC
AAAGACGCCCAAGAATCGACTTAGAGGAATGGTTACTAGCGAAATATGAG
GCTTGGGACGAGGAGCCGCCACTGAACGTCGAAATGTGTGATCACGAATT
CGAAAAACTTCTAAGAATAATGAAACAGAATAAAGAAATGGACAGGCTGG
CGAAATTAAGGATTGAAGAAGCCAAACAACTCAAGTTTGAATATGAATCC
GAAGATGGGTCCCACACAGCCGAATCAATCTACAAAGAAAAACAAGAGAA
ACTTATCTATCAGAGAACGTATACAAATAGGAATCGAAAATGATAACGGA
TTTGCTGTTCGACAGTGTCAAGAGGAACAAGAAGATGTCATACGGAATTT
CAAAAAATTTCATCACGAAACTCTTGTACAACTTCATCAGCTTTTATCAG
AACAAGAATGAAGCATCACATGTAAACATACCCTTATTACAAAAACGTCA
AAAAGAAACACACTCGATGCATCAGAAATGTGTGAAGTATGAAGAACAAA
TGTTTGAGATGAAGTTACTGTATATCATTGTTACGCTTGAAGGAGGAAAT
GGAACGCACGGAAGAAGAAATCATTGAAAAAGAAAAAGATGTCGAAAAGT
TGAATCACAAACTCATCACTTGTAAGGAGAACTTGAAGCAGATTAACGAG
AGCGCGTCTACAGAACATCCTGGATTTTGTTGGCCTTCCTGCCCATGTTT
TGTCCAGTGCTGGTAAAGCTAGTCTCAAGAACTTAACAGACCTGGCGTCC
GTGTTGAAGATCAAAGACGCCCAAGAATCGACTTAGAGGAATGGTTACTA
GCGAAATATGAGGCTTGGGACGAGGAGCCGCCACTGAACGTCGAAATGTG
TGATCACGAATTCGAAAAACTTCTAAGAATAATGAAACAGAATAAAGAAA
TGGACAGGCTGGCGAAATTAAGGATTGAAGAAGCCAAACAACTCAAGTTT
GAATATGAATCCGAAGATGGGTCCCACACAGCCGAATCAATCTACAAAGA
AAAACAAGAGAAACTTATCTATCAGAGAACGTATACAAATAGGAATCGAA
AATGATAACGGATTTGCTGTTCGACAGTGTCAAGAGGAACAAGAAGATGT
CATACGGAATTTCAAAAAATTTCATCACGAAACTCTTGTACAACTTCATC
AGCTTTTATCAGAACAAGAATGAAGCATCACATGTAAACATACCCTTATT
ACAAAAACGTCAAAAAGAAACACACTCGATGCATCAGAAATGTGTGAAGT
ATGAAGAACAAATGTTTGAGATGAAGTTACTGTATATCATTGTTACGCTT
GAAGGAGGAAATGGAACGCACGGAAGAAGAAATCATTGAAAAAGAAAAAG
ATGTCGAAAAGTTGAATCACAAACTCATCACTTGTAAGGAGAACTTGAAG
CAGATTAACGAGAGCGCGTCTACAGAACATCCTGGATTTTGTTGGCCTTC
CTGCCCATGTTTTGTCCAGTGCTGGTAAAGCTAGTCTCAAGAACTTAACA
GACCTGGCGTCCGTGTTGAAGATCAAAGACGCCCAAGAATCGACTTAGAG
GAATGGTTACTAGCGAAATATGAGGCTTGGGACGAGGAGCCGCCACTGAA
CGTCGAAATGTGTGATCACGAATTCGAAAAACTTCTAAGAATAATGAAAC
AGAATAAAGAAATGGACAGGCTGGCGAAATTAAGGATTGAAGAAGCCAAA
CAACTCAAGTTTGAATATGAATCCGAAGATGGGTCCCACACAGCCGAATC
AATCTACAAAGAAAAACAAGAGAAACTTATCTATCAGAGAACGTATACAA
ATAGGAATCGAAAATGATAACGGATTTGCTGTTCGACAGTGTCAAGAGGA
ACAAGAAGATGTCATACGGAATTTCAAAAAATTTCATCACGAAACTCTTG
TACAACTTCATCAGCTTTTATCAGAACAAGAATGAAGCATCACATGTAAA
CATACCCTTATTACAAAAACGTCAAAAAGAAACACACTCGATGCATCAGA
AATGTGTGAAGTATGAAGAACAAATGTTTGAGATGAAGTTACTGTATATC
ATTGTTACGCTTGAAGGAGGAAATGGAACGCACGGAAGAAGAAATCATTG
AAAAAGAAAAAGATGTCGAAAAGTTGAATCACAAACTCATCACTTGTAAG
GAGAACTTGAAGCAGATTAACGAGAGCGCGTCTACAGAACATCCTGGATT
TTGTTGGCCTTCCTGCCCATGTTTTGTCCAGTGCTGGTAAAGCTAGTCTC
AAGAACTTAACAGACCTGGCGTCCGTGTTGAAGATCAAAGACGCCCAAGA
ATCGACTTAGAGGAATGGTTACTAGCGAAATATGAGGCTTGGGACGAGGA
GCCGCCACTGAACGTCGAAATGTGTGATCACGAATTCGAAAAACTTCTAA
GAATAATGAAACAGAATAAAGAAATGGACAGGCTGGCGAAATTAAGGATT
GAAGAAGCCAAACAACTCAAGTTTGAATATGAATCCGAAGATGGGTCCCA
CACAGCCGAATCAATCTACAAAGAAAAACAAGAGAAACTTATCTATCAGA
GAACGTATACAAATAGGAATCGAAAATGATAACGGATTTGCTGTTCGACA
GTGTCAAGAGGAACAAGAAGATGTCATACGGAATTTCAAAAAATTTCATC
ACGAAACTCTTGTACAACTTCATCAGCTTTTATCAGAACAAGAATGAAGC
ATCACATGTAAACATACCCTTATTACAAAAACGTCAAAAAGAAACACACT
CGATGCATCAGAAATGTGTGAAGTATGAAGAACAAATGTTTGAGATGAAG
TTACTGTATATCATTGTTACGCTTGAAGGAGGAAATGGAACGCACGGAAG
AAGAAATCATTGAAAAAGAAAAAGATGTCGAAAAGTTGAATCACAAACTC
ATCACTTGTAAGGAGAACTTGAAGCAGATTAACGAGAGCGCGTCTACAGA
ACATCCTGGATTTTGTTGGCCTTCCTGCCCATGTTTTGTCCAGTGCTGGT
AAAGCTAGTCTCAAGAACTTAACAGACCTGGCGTCCGTGTTGAAGATCAA
AGACGCCCAAGAATCGACTTAGAGGAATGGTTACTAGCGAAATATGAGGC
TTGGGACGAGGAGCCGCCACTGAACGTCGAAATGTGTGATCACGAATTCG
AAAAACTTCTAAGAATAATGAAACAGAATAAAGAAATGGACAGGCTGGCG
AAATTAAGGATTGAAGAAGCCAAACAACTCAAGTTTGAATATGAATCCGA
AGATGGGTCCCACACAGCCGAATCAATCTACAAAGAAAAACAAGAGAAAC
TTATCTATCAGAGAACGTATACAAATAGGAATCGAAAATGATAACGGATT
TGCTGTTCGACAGTGTCAAGAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_002124XLOC_002124Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00003811-proteinTCONS_00003811-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00003811-exon-sc0000031-1575043694:642054..642216TCONS_00003811-exon-sc0000031-1575043694:642054..642216Clytia hemisphaericaexon
TCONS_00003811-exon-sc0000031-1575043694:641292..641475TCONS_00003811-exon-sc0000031-1575043694:641292..641475Clytia hemisphaericaexon
TCONS_00003811-exon-sc0000031-1575043694:640519..640651TCONS_00003811-exon-sc0000031-1575043694:640519..640651Clytia hemisphaericaexon
TCONS_00003811-exon-sc0000031-1575043694:639395..639529TCONS_00003811-exon-sc0000031-1575043694:639395..639529Clytia hemisphaericaexon
TCONS_00003811-exon-sc0000031-1575043694:631372..631495TCONS_00003811-exon-sc0000031-1575043694:631372..631495Clytia hemisphaericaexon
TCONS_00003811-exon-sc0000031-1575043694:630473..630539TCONS_00003811-exon-sc0000031-1575043694:630473..630539Clytia hemisphaericaexon
TCONS_00003811-exon-sc0000031-1510915933:642054..642216TCONS_00003811-exon-sc0000031-1510915933:642054..642216Clytia hemisphaericaexon
TCONS_00003811-exon-sc0000031-1510915933:641292..641475TCONS_00003811-exon-sc0000031-1510915933:641292..641475Clytia hemisphaericaexon
TCONS_00003811-exon-sc0000031-1510915933:640519..640651TCONS_00003811-exon-sc0000031-1510915933:640519..640651Clytia hemisphaericaexon
TCONS_00003811-exon-sc0000031-1510915933:639395..639529TCONS_00003811-exon-sc0000031-1510915933:639395..639529Clytia hemisphaericaexon
TCONS_00003811-exon-sc0000031-1510915933:631372..631495TCONS_00003811-exon-sc0000031-1510915933:631372..631495Clytia hemisphaericaexon
TCONS_00003811-exon-sc0000031-1510915933:630473..630539TCONS_00003811-exon-sc0000031-1510915933:630473..630539Clytia hemisphaericaexon
TCONS_00003811-exon-sc0000031-1491911889:642054..642216TCONS_00003811-exon-sc0000031-1491911889:642054..642216Clytia hemisphaericaexon
TCONS_00003811-exon-sc0000031-1491911889:641292..641475TCONS_00003811-exon-sc0000031-1491911889:641292..641475Clytia hemisphaericaexon
TCONS_00003811-exon-sc0000031-1491911889:640519..640651TCONS_00003811-exon-sc0000031-1491911889:640519..640651Clytia hemisphaericaexon
TCONS_00003811-exon-sc0000031-1491911889:639395..639529TCONS_00003811-exon-sc0000031-1491911889:639395..639529Clytia hemisphaericaexon
TCONS_00003811-exon-sc0000031-1491911889:631372..631495TCONS_00003811-exon-sc0000031-1491911889:631372..631495Clytia hemisphaericaexon
TCONS_00003811-exon-sc0000031-1491911889:630473..630539TCONS_00003811-exon-sc0000031-1491911889:630473..630539Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000031supercontigsc0000031:630473..642216 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
120.933 117.35 141.906 129.419 27.7285 27.8009 26.3588 28.2532 21.4333 17.0581 21.795 16.7019 13.3587 15.3508 12.6542 13.9058 18.9598 21.2622 8.71772 9.84962 12.0085 9.83697 39.3835 33.0796 42.6848 34.4507 10.3487 6.78318 18.4685 23.3862
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00003811 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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