TCONS_00003800 (transcript) - C. hemisphaerica

Overview
NameTCONS_00003800
Unique NameTCONS_00003800
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2419

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00003800 ID=TCONS_00003800|Name=TCONS_00003800|organism=Clytia hemisphaerica|type=transcript|length=2419bp
cttgTTTAATGTCGAATTCGTCAACAAATGATGTCTGACTTGTTTTGTTA
AGCGAGACATGTTCGTTTTAAAATTCCCTGTAGTTCAGTTTTAGGAAAAC
CCATTTTTTTATAACGTAGACAAAACATCAACCTTTAGATCATATGAATT
TTCGAACTAGTATGAGAAACAgagtttggattttttttatgaagtttGAA
AAACCAATACTTCGATTAAGCGCGTAGTAGTACTCTTAAACAGCTTTCTC
AATAGAAACGTGAAGCATAAGCATCAGGTACTTCTAATGGCTTCAGATAA
GGTTTGCATTCTCACTGATCAAGACGAATTAAGTGAAGAGAATCTGGAGG
ATGATCAGAACTTTGGAATTTCATTCTCCAACAGTACACTGGTGATGGAA
AATGACAACCAGGAcgaaaaatcaccaaaaattgaaaaccaaCAGGAGAA
TCGGTTTCAAGAATCAAGAAGAGAGCAATCTGAAAGCATGTCTCTGAATG
AGTCAGAAAGTAATTCATCCGAAAGCAACCCTAGTGAGGACTCAAGTTAT
AAACCAACAAAGAAGAATCGATCCAAAAGCAATCCCACTGAAGATTCTAC
CTTTGCAAAAAGAGTCAAAAATCGATCAAAAAGCGACCCATCTAGGACAT
CTATCTCGTCGTTAGGATCAATCAACTTTACTGGATCCTCAGTGATTTCG
CCAGTGATCGAATCTGCCAACAATTCAACCGAAGACGAAAACAGAGACTT
CGAGATTGTGAGAATTCCTGCTGAGAATGAAATGGAGATTATGAAGAACA
ACAATGATCCACAAAATGAAGACCAGATCTTGGAGAATATCAATATTTAT
AAATCATGGTGGAAATACCCGTTAATTTTTTCAGGACTCTTAGGATCACA
GCCTGCTCCTCGAGAAAAGAAATCCAAAAGATATTGTAGCACATTATGCT
TTAGGCGTCTCCTTATATtcgttttatttctatttcttctGGTCCTGAAA
TTTGATGGATTATTCCAAATGAGTTGGATACTACTTGAATCAAAGTTTCC
GTTCACCGTTATCAATAATGTGGTCTGGGAGCTGCGATGGATTTTAACGT
TCTTTCTCTGCATGCTTTTTATGGATAAAGGTGGATTTCATAATTTCTTG
AGTCATGTAGAAATCTCACGAAAAAAATGGTATGAAAATGCAAGAAAGAT
GCGGACCTACATCGGTGTTGTTTTTGTCATCACAGTTTTCGCCCCACCGA
TGTTTGTTTTCTTGGATCAGAATTGGTTAAATATTGCCAGTCTTGCAAAA
CCGGATATGTGGAAGAAGATATTGATGGCCGTTCTGGTGTTCTTGTATCG
TTTGATCATGACGCCGAGTTTTTGTGTTTTATCAGCCGTTTTGTATCTGT
TGGGTGATCATATAAGGATGACTGGGAAACgaatttcccaacaaaaaacA
GCAAACGATGCACATGATCTGGTCCGTAAAATGCGAAAGTTGATCACAGA
GACTGAGCACTCCCTACAAATTAACATTGTGGTTCATATGTTTCTTGTGT
TTTGTGTCTCCTTCACCACAGCTATGTCTACGTTAGAAAGATTGGAATTC
ACATACAAGTCGAACGATGGAAACAATACGTCAGGTGGAGTTGTTCGAGT
AAAAATTATCGATCAAGGACCTGCAGCAAATCTCCCAATCACCGActtaa
taaatttgaaaactaaTTTCATTGAAATGAAGAagcattttgagaaaatg
aacAAAGCTGTTGGACCAGAGACCAACGACTCCAAAGAAAACGATGGTAA
CGGTCAACAAAGTGAAATCAAAGCTGAAGATCTCCAAAAAGCTTACGAAC
TCATTGGAGATGTCCAACAACGCCAAATCCAATTGATGGAGAAGCTAGTC
CAAAATAATTATCACCACAAGCAAAACACAACAATCGAATCTAGCCTGCA
ATCGACACCCTACATCATGAACGTATTGGGTTCCATACCAGACAGCTATC
GCAAAGTTCGTGTTGTGTTAGACATGTCCATGATGTTAATCGAGATCTTA
CTTCTATACATGGCGCCATTATGTCTTATTGTACGGACCGACTACCAGCT
ACGGGAAGTTATCCACAAAGCATGGGATATCAATATCAGTcaacaaatca
ataaaaatcTGGCAATTACTACTTATAGTATGAAAGAACATTTGATAGCA
CAAATTAAAGATATAAAAGGCTTTAGAGTGTGTGGATACAGGGTTGAATT
CTTCAAAACTTTGATTATAGCATCTTTCGGACCTTTCTTAGCCATTGCTA
TGAGAGCAACTTTACAACACTATGGAATCAAGTAATCCTGTGGGAAAAGA
ATTAAGATGGTTCGAAAAATCGAAAACGAATTTGATGAAaatgtctcccg
aatagacggggggaggggg
Run BLAST on NCBI

protein sequence of TCONS_00003800-protein

>TCONS_00003800-protein ID=TCONS_00003800-protein|Name=TCONS_00003800-protein|organism=Clytia hemisphaerica|type=polypeptide|length=682bp
MASDKVCILTDQDELSEENLEDDQNFGISFSNSTLVMENDNQDEKSPKIE
NQQENRFQESRREQSESMSLNESESNSSESNPSEDSSYKPTKKNRSKSNP
TEDSTFAKRVKNRSKSDPSRTSISSLGSINFTGSSVISPVIESANNSTED
ENRDFEIVRIPAENEMEIMKNNNDPQNEDQILENINIYKSWWKYPLIFSG
LLGSQPAPREKKSKRYCSTLCFRRLLIFVLFLFLLVLKFDGLFQMSWILL
ESKFPFTVINNVVWELRWILTFFLCMLFMDKGGFHNFLSHVEISRKKWYE
NARKMRTYIGVVFVITVFAPPMFVFLDQNWLNIASLAKPDMWKKILMAVL
VFLYRLIMTPSFCVLSAVLYLLGDHIRMTGKRISQQKTANDAHDLVRKMR
KLITETEHSLQINIVVHMFLVFCVSFTTAMSTLERLEFTYKSNDGNNTSG
GVVRVKIIDQGPAANLPITDLINLKTNFIEMKKHFEKMNKAVGPETNDSK
ENDGNGQQSEIKAEDLQKAYELIGDVQQRQIQLMEKLVQNNYHHKQNTTI
ESSLQSTPYIMNVLGSIPDSYRKVRVVLDMSMMLIEILLLYMAPLCLIVR
TDYQLREVIHKAWDINISQQINKNLAITTYSMKEHLIAQIKDIKGFRVCG
YRVEFFKTLIIASFGPFLAIAMRATLQHYGIK
Run BLAST on NCBI

transcript from alignment at sc0000031:464876..471623-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00003800 ID=TCONS_00003800|Name=TCONS_00003800|organism=Clytia hemisphaerica|type=transcript|length=6748bp|location=Sequence derived from alignment at sc0000031:464876..471623- (Clytia hemisphaerica)
CTTGTTTAATGTCGAATTCGTCAACAAATGATGTCTGACTTGTTTTGTTA
AGCGAGACATGTTCGTTTTAAAATTCCCTGTAGTTCAGTTTTAGGAAAAC
CCATTTTTTTATAACGTAGACAAAACATCAACCTTTAGATCATATGAATT
TTCGAACTAGTATGAGAAACAGAGTTTGGATTTTTTTTATGAAGTTTGAA
AAACCAATACTTCGATTAAGCGCGTAGTAGTACTCTTAAACAGCTTTCTC
AATAGAAACGTGAAGCATAAGCATCAGGTACTTCTAATGGCTTCAGATAA
GGTTTGCATTCTCACTGATCAAGACGAATTAAGTGAAGAGAATCTGGAGG
ATGATCAGAACTTTGGAATTTCATTCTCCAACAGTACACTGGTGATGGAA
AATGACAACCAGGACGAAAAATCACCAAAAATTGAAAACCAACAGGAGAA
TCGGTTTCAAGAATCAAGAAGAGAGCAATCTGAAAGCATGTCTCTGAATG
AGTCAGAAAGTAATTCATCCGAAAGCAACCCTAGTGAGGACTCAAGTTAT
AAACCAACAAAGAAGAATCGATCCAAAAGCAATCCCACTGAAGATTCTAC
CTTTGCAAAAAGAGTCAAAAATCGATCAAAAAGCGACCCATCTAGGACAT
CTATCTCGTCGTTAGGATCAATCAACTTTACTGGATCCTCAGTGATTTCG
CCAGTGATCGAATCTGCCAACAATTCAACCGAAGACGAAAACAGAGACTT
CGAGATTGTGAGAATTCCTGCTGAGAATGAAATGGAGATTATGAAGAACA
ACAATGATCCACAAAATGAAGACCAGATCTTGGAGAATATCAATATTTAT
AAATCATGGTGGAAATACCCGTTAATTTTTTCAGGACTCTTAGGATCACA
GCCTGCTCCTCGAGAAAAGAAATCCAAAAGATATTGTAGCACATTATGCT
TTAGGCGTCTCCTTATATTCGTTTTATTTCTATTTCTTCTGGTCCTGAAA
TTTGATGGATTATTCCAAATGAGTTGGATACTACTTGAATCAAAGTTTCC
GTTCACCGTTATCAATAATGTGGTCTGGGAGCTGCGATGGATTTTAACGT
TCTTTCTCTGCATGCTTTTTATGGATAAAGGTGGATTTCATAATTTCTTG
AGTCATGTAGAAATCTCACGAAAAAAATGGTATGAAAATGCAAGAAAGAT
GCGGACCTACATCGGTGTTGTTTTTGTAAGTATTATAATTTGTACCCATT
TCCTTTTGTTCCCATTTTAAGATCATTGTACTCATAAGAGATTTGGCCAT
CAGCATTACTTTGATATACATGGAGAGCCATGTCTTAAATAGCCTGTTAG
ACGAAAAGTTTCGATAAGTCATCTTTCGTGGGACGCGATTTCTACAAAAA
AATACACGTAGCACACAGTCTTGAAATTTCGTTACATCTAAGACCTTTTC
AATTCCAGGTCATCACAGTTTTCGCCCCACCGATGTTTGTTTTCTTGGAT
CAGAATTGGTTAAATATTGCCAGTCTTGCAAAACCGGATATGTGGAAGAA
GATATTGATGGCCGTTCTGGTGTTCTTGTATCGTTTGATCATGACGCCGA
GTTTTTGTGTTTTATCAGCCGTTTTGTATCTGTTGGGTGATCATATAAGG
ATGACTGGGAAACGAATTTCCCAACAAAAAACAGGTTTGTGAATCTACTT
TCTCATGATGATTTCACCAAAGTTTGATCGACTTTTAAAACAATAATATT
CTTTATTCTATAAAGTGCAGCGTTTTGTAAAAAATTACTGAGGAATTCTT
GTTTTACCATAGTGCCTAAAAGCTACACCCAGCAAATTCTAAAACTTCTA
CTATCTAAATGGAATTGCACACTAGTGAAGGTAGTAGAAAATAGGCCTGT
GACTGGAGGACCTTAAAATTATGTAAAGACATCATTACACAGACTTTCTT
TCAATCTCTCTCCACTCGTAGCAAACGATGCACATGATCTGGTCCGTAAA
ATGCGAAAGTTGATCACAGAGACTGAGCACTCCCTACAAATTAACATTGT
GGTTCATATGTTTCTTGTGTTTTGTGTCTCCTTCACCACAGCTATGTCTA
CGTTAGAAAGGTCAGTATTACATCTCTGTAACATAGTATTACATCTCTGT
AACATAGTATTACACTTCTGTAACATAGTATTACATCTCTGTAACATAGT
ATTACATCTCTGTAACATAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNACATCTCTGTAA
CATAGTATTACACTTCTGTAACATAGTATTACACTTCTGTAACATAGTAT
TACATCTCTGTAACATAGTATTACATCTCTGTAACATAGTAATACACCTC
TGTAACATAGCAATACACTTCTGTAATATAGTATTACACTTCTGTAATCG
TCAGCCGTGCAAAATTACTCGAATCTGATTGGTTTAGAGGAGTGCGATTA
ATCGTTAATTGCACTATTACCACTTTTTGCACTCTTCGGCGGGGGGACAC
CTTTGTCCCCTTATTCTTTTCTCTCCCAAGTTCTGTGTCAGCAGACTTAG
AACACTCCTGTGTCATAGACCCGCTGGGGACCCCAGCATCACTAGAAAAT
TTGGCTAAAATTTCGTCCCCGGTGGGAAAAATTACAATTTCAGCTCCATT
TAAAGAGCTACATTGTTTAGAATACAACACCCAAAAGACTACAAAAAGTT
TCACTCAACGGTAGTATATGTGAGAGCATTGCTGTACAAAAATAGAACAC
CAGTTTAGCACTACTTTGTAAACACCCAAGCAGCACTAAACTTTACTCCG
ACGACCCATCTCAAGTTTTATCACTTAAAAGACCCCTGCCTCACAGCCCC
GGTGGAATATTTTTCTCAGTGTAGATAAAAATTCCTATTGAGACTCCTTT
GTTCCAAGTGTTCCAAGGTTAAAAATTCCATGGGGGATAGTTTTAGAGTG
TAATTTTTAAACATTAAATTTCGAATGGGGATGAATTAAAAGTTAATTTT
CAAGTGGAGTTGAAATTATAAGGTATTTTACCCCAGGGACAAATTTTATG
TCAATATTACCAGTAGGGATAGGCTCCCAGCAGGTCTGTGACACAGGGGT
ATCTTAAAGTATGCACTCTTTTTTATTACCATTTGGAAACCATCTCATTT
CAATTAGGGTGATTTTCTTGAGAGTGGTCTTTACATGGTAACAAGAAAGA
GTGCATCCTATATGGGCATTGCAATTTATAATATAAAATGTATTACTGTT
TTTGAAATCTGGCACTAGATTGGAATTCACATACAAGTCGAACGATGGAA
ACAATACGTCAGGTGGAGTTGTTCGAGTAAAAATTATCGATCAAGGACCT
GCAGCAAATCTCCCAATCACCGACTTAATAAATTTGAAAACTAATTTCAT
TGTAAGTAGATATCAAAACTCGTGGTGCCATTTTCCGAATGGAAACTTAT
CTGAGGCAAAGTTTGACTGAGTTATACGATTCAAGGAGCACCTTTTTCGA
TTTTTTTTTTCGATTTTTAAAAATGAAAGTTTTTCAATTCAACACTATTA
TTATTAAGCCTCCATAACTCGAACACGCAACAGGAACACAAAGTTAAGTT
CCAATTATGGAAATTTCATGCTATGGTTTATAAAGCATTATAAACTGGAA
CCACAAAAATCTTTTCAAAATTTTTCTTCTTCGCGAGTCCTCAAAGTTGA
AACACTTTTCCTCGCAAAAGTCTTCATTTTCTTTTTCATCACTTTTTTCT
TTACAATTTTTGAATTTTCAGATTCAAGAATAGTTGGCCTAACAGAAAAT
GTATAACATGCTATAGTTGTTTTGGTTACATCAAGCAGAAATCTATACTT
TGTAAATGTCAAATCNTTCAGGAATAGTTGGCCTAACAGAAAATGTATAA
CATGCCATAGTTGTTTTGGTTACATTAGGCAGAAATCTATACTTTGTAAA
TGTAAAATATAAAAATTTCACTATGATAGAAGTTCGAATTGTGGCTAGAA
GTCAATCTCCTTGGTAGGATTTGAAGCCAACAAATCCTACCAAAGTTGCG
CGGCCTTGAGCGGCTCGCCTGGTTTTTACACAAATGACAGATTGAAACTA
AAATTTACCGCTAAATTTCGAAAAAAATATCAATCGTAAACAATGGAATT
GCTAGATTCAATCTGTTAAGGCTTCACTTTTTCTTGCCTGAGAAATGGTC
TACACTGTATTCAGCCAACATTATTTAATTGACCACTGTTGAATTCTTTT
AGGAAATGAAGAAGCATTTTGAGAAAATGAACAAAGCTGTTGGACCAGAG
ACCAACGACTCCAAAGAAAACGATGGTAACGGTCAACAAAGTGAAATCAA
AGCTGAAGATCTCCAAAAAGCTTACGAACTCATTGGAGATGTCCAACAAC
GCCAAATCCAATTGATGGAGAAGCTAGTCCAAAATAATTATCACCACAAG
CAAAACACAACAATCGAATCTAGCCTGCAATCGACACCCTACATCATGAA
CGTATTGGGTTCCATACCAGACAGCTATCGCAAAGTTCGTGTTGTGTTAG
ACATGTCCATGATGTTAATCGAGATCTTACTTCTATACATGGCGCCATTA
TGTCTTATTGTACGGACCGACTACCAGCTACGGGAAGTTATCCACAAAGC
ATGGGATATCAATATCAGTCAACAAATCAATAAAAATCTGGCAATTACTA
CTTATAGTATGAAAGAACATTTGATAGCACAAATTAAAGATATAAAAGGC
TTTAGAGTGTGTGGATACAGGGTTGAATTCTTCAAAACTTTGATTATAGC
ATCTTTCGGACCTTTCTTAGCCATTGCTATGAGAGCAACTTTACAACACT
ATGGAATCAAGTAATCCTGTGGGAAAAGAATTAAGATGGTTCGAAAAATC
GAAAACGAATTTGATGAAAATGTCTCCCGAATAGACGGGGGGAGGGGG

Coding sequence (CDS) from alignment at sc0000031:464876..471623-

>TCONS_00003800 ID=TCONS_00003800|Name=TCONS_00003800|organism=Clytia hemisphaerica|type=CDS|length=10245bp|location=Sequence derived from alignment at sc0000031:464876..471623- (Clytia hemisphaerica)
GAAATGAAGAAGCATTTTGAGAAAATGAACAAAGCTGTTGGACCAGAGAC
CAACGACTCCAAAGAAAACGATGGTAACGGTCAACAAAGTGAAATCAAAG
CTGAAGATCTCCAAAAAGCTTACGAACTCATTGGAGATGTCCAACAACGC
CAAATCCAATTGATGGAGAAGCTAGTCCAAAATAATTATCACCACAAGCA
AAACACAACAATCGAATCTAGCCTGCAATCGACACCCTACATCATGAACG
TATTGGGTTCCATACCAGACAGCTATCGCAAAGTTCGTGTTGTGTTAGAC
ATGTCCATGATGTTAATCGAGATCTTACTTCTATACATGGCGCCATTATG
TCTTATTGTACGGACCGACTACCAGCTACGGGAAGTTATCCACAAAGCAT
GGGATATCAATATCAGTCAACAAATCAATAAAAATCTGGCAATTACTACT
TATAGTATGAAAGAACATTTGATAGCACAAATTAAAGATATAAAAGGCTT
TAGAGTGTGTGGATACAGGGTTGAATTCTTCAAAACTTTGATTATAGCAT
CTTTCGGACCTTTCTTAGCCATTGCTATGAGAGCAACTTTACAACACTAT
GGAATCAAGTAAATTGGAATTCACATACAAGTCGAACGATGGAAACAATA
CGTCAGGTGGAGTTGTTCGAGTAAAAATTATCGATCAAGGACCTGCAGCA
AATCTCCCAATCACCGACTTAATAAATTTGAAAACTAATTTCATTCAAAC
GATGCACATGATCTGGTCCGTAAAATGCGAAAGTTGATCACAGAGACTGA
GCACTCCCTACAAATTAACATTGTGGTTCATATGTTTCTTGTGTTTTGTG
TCTCCTTCACCACAGCTATGTCTACGTTAGAAAGGTCATCACAGTTTTCG
CCCCACCGATGTTTGTTTTCTTGGATCAGAATTGGTTAAATATTGCCAGT
CTTGCAAAACCGGATATGTGGAAGAAGATATTGATGGCCGTTCTGGTGTT
CTTGTATCGTTTGATCATGACGCCGAGTTTTTGTGTTTTATCAGCCGTTT
TGTATCTGTTGGGTGATCATATAAGGATGACTGGGAAACGAATTTCCCAA
CAAAAAACAGATGGCTTCAGATAAGGTTTGCATTCTCACTGATCAAGACG
AATTAAGTGAAGAGAATCTGGAGGATGATCAGAACTTTGGAATTTCATTC
TCCAACAGTACACTGGTGATGGAAAATGACAACCAGGACGAAAAATCACC
AAAAATTGAAAACCAACAGGAGAATCGGTTTCAAGAATCAAGAAGAGAGC
AATCTGAAAGCATGTCTCTGAATGAGTCAGAAAGTAATTCATCCGAAAGC
AACCCTAGTGAGGACTCAAGTTATAAACCAACAAAGAAGAATCGATCCAA
AAGCAATCCCACTGAAGATTCTACCTTTGCAAAAAGAGTCAAAAATCGAT
CAAAAAGCGACCCATCTAGGACATCTATCTCGTCGTTAGGATCAATCAAC
TTTACTGGATCCTCAGTGATTTCGCCAGTGATCGAATCTGCCAACAATTC
AACCGAAGACGAAAACAGAGACTTCGAGATTGTGAGAATTCCTGCTGAGA
ATGAAATGGAGATTATGAAGAACAACAATGATCCACAAAATGAAGACCAG
ATCTTGGAGAATATCAATATTTATAAATCATGGTGGAAATACCCGTTAAT
TTTTTCAGGACTCTTAGGATCACAGCCTGCTCCTCGAGAAAAGAAATCCA
AAAGATATTGTAGCACATTATGCTTTAGGCGTCTCCTTATATTCGTTTTA
TTTCTATTTCTTCTGGTCCTGAAATTTGATGGATTATTCCAAATGAGTTG
GATACTACTTGAATCAAAGTTTCCGTTCACCGTTATCAATAATGTGGTCT
GGGAGCTGCGATGGATTTTAACGTTCTTTCTCTGCATGCTTTTTATGGAT
AAAGGTGGATTTCATAATTTCTTGAGTCATGTAGAAATCTCACGAAAAAA
ATGGTATGAAAATGCAAGAAAGATGCGGACCTACATCGGTGTTGTTTTTG
AAATGAAGAAGCATTTTGAGAAAATGAACAAAGCTGTTGGACCAGAGACC
AACGACTCCAAAGAAAACGATGGTAACGGTCAACAAAGTGAAATCAAAGC
TGAAGATCTCCAAAAAGCTTACGAACTCATTGGAGATGTCCAACAACGCC
AAATCCAATTGATGGAGAAGCTAGTCCAAAATAATTATCACCACAAGCAA
AACACAACAATCGAATCTAGCCTGCAATCGACACCCTACATCATGAACGT
ATTGGGTTCCATACCAGACAGCTATCGCAAAGTTCGTGTTGTGTTAGACA
TGTCCATGATGTTAATCGAGATCTTACTTCTATACATGGCGCCATTATGT
CTTATTGTACGGACCGACTACCAGCTACGGGAAGTTATCCACAAAGCATG
GGATATCAATATCAGTCAACAAATCAATAAAAATCTGGCAATTACTACTT
ATAGTATGAAAGAACATTTGATAGCACAAATTAAAGATATAAAAGGCTTT
AGAGTGTGTGGATACAGGGTTGAATTCTTCAAAACTTTGATTATAGCATC
TTTCGGACCTTTCTTAGCCATTGCTATGAGAGCAACTTTACAACACTATG
GAATCAAGTAAATTGGAATTCACATACAAGTCGAACGATGGAAACAATAC
GTCAGGTGGAGTTGTTCGAGTAAAAATTATCGATCAAGGACCTGCAGCAA
ATCTCCCAATCACCGACTTAATAAATTTGAAAACTAATTTCATTCAAACG
ATGCACATGATCTGGTCCGTAAAATGCGAAAGTTGATCACAGAGACTGAG
CACTCCCTACAAATTAACATTGTGGTTCATATGTTTCTTGTGTTTTGTGT
CTCCTTCACCACAGCTATGTCTACGTTAGAAAGGTCATCACAGTTTTCGC
CCCACCGATGTTTGTTTTCTTGGATCAGAATTGGTTAAATATTGCCAGTC
TTGCAAAACCGGATATGTGGAAGAAGATATTGATGGCCGTTCTGGTGTTC
TTGTATCGTTTGATCATGACGCCGAGTTTTTGTGTTTTATCAGCCGTTTT
GTATCTGTTGGGTGATCATATAAGGATGACTGGGAAACGAATTTCCCAAC
AAAAAACAGATGGCTTCAGATAAGGTTTGCATTCTCACTGATCAAGACGA
ATTAAGTGAAGAGAATCTGGAGGATGATCAGAACTTTGGAATTTCATTCT
CCAACAGTACACTGGTGATGGAAAATGACAACCAGGACGAAAAATCACCA
AAAATTGAAAACCAACAGGAGAATCGGTTTCAAGAATCAAGAAGAGAGCA
ATCTGAAAGCATGTCTCTGAATGAGTCAGAAAGTAATTCATCCGAAAGCA
ACCCTAGTGAGGACTCAAGTTATAAACCAACAAAGAAGAATCGATCCAAA
AGCAATCCCACTGAAGATTCTACCTTTGCAAAAAGAGTCAAAAATCGATC
AAAAAGCGACCCATCTAGGACATCTATCTCGTCGTTAGGATCAATCAACT
TTACTGGATCCTCAGTGATTTCGCCAGTGATCGAATCTGCCAACAATTCA
ACCGAAGACGAAAACAGAGACTTCGAGATTGTGAGAATTCCTGCTGAGAA
TGAAATGGAGATTATGAAGAACAACAATGATCCACAAAATGAAGACCAGA
TCTTGGAGAATATCAATATTTATAAATCATGGTGGAAATACCCGTTAATT
TTTTCAGGACTCTTAGGATCACAGCCTGCTCCTCGAGAAAAGAAATCCAA
AAGATATTGTAGCACATTATGCTTTAGGCGTCTCCTTATATTCGTTTTAT
TTCTATTTCTTCTGGTCCTGAAATTTGATGGATTATTCCAAATGAGTTGG
ATACTACTTGAATCAAAGTTTCCGTTCACCGTTATCAATAATGTGGTCTG
GGAGCTGCGATGGATTTTAACGTTCTTTCTCTGCATGCTTTTTATGGATA
AAGGTGGATTTCATAATTTCTTGAGTCATGTAGAAATCTCACGAAAAAAA
TGGTATGAAAATGCAAGAAAGATGCGGACCTACATCGGTGTTGTTTTTGA
AATGAAGAAGCATTTTGAGAAAATGAACAAAGCTGTTGGACCAGAGACCA
ACGACTCCAAAGAAAACGATGGTAACGGTCAACAAAGTGAAATCAAAGCT
GAAGATCTCCAAAAAGCTTACGAACTCATTGGAGATGTCCAACAACGCCA
AATCCAATTGATGGAGAAGCTAGTCCAAAATAATTATCACCACAAGCAAA
ACACAACAATCGAATCTAGCCTGCAATCGACACCCTACATCATGAACGTA
TTGGGTTCCATACCAGACAGCTATCGCAAAGTTCGTGTTGTGTTAGACAT
GTCCATGATGTTAATCGAGATCTTACTTCTATACATGGCGCCATTATGTC
TTATTGTACGGACCGACTACCAGCTACGGGAAGTTATCCACAAAGCATGG
GATATCAATATCAGTCAACAAATCAATAAAAATCTGGCAATTACTACTTA
TAGTATGAAAGAACATTTGATAGCACAAATTAAAGATATAAAAGGCTTTA
GAGTGTGTGGATACAGGGTTGAATTCTTCAAAACTTTGATTATAGCATCT
TTCGGACCTTTCTTAGCCATTGCTATGAGAGCAACTTTACAACACTATGG
AATCAAGTAAATTGGAATTCACATACAAGTCGAACGATGGAAACAATACG
TCAGGTGGAGTTGTTCGAGTAAAAATTATCGATCAAGGACCTGCAGCAAA
TCTCCCAATCACCGACTTAATAAATTTGAAAACTAATTTCATTCAAACGA
TGCACATGATCTGGTCCGTAAAATGCGAAAGTTGATCACAGAGACTGAGC
ACTCCCTACAAATTAACATTGTGGTTCATATGTTTCTTGTGTTTTGTGTC
TCCTTCACCACAGCTATGTCTACGTTAGAAAGGTCATCACAGTTTTCGCC
CCACCGATGTTTGTTTTCTTGGATCAGAATTGGTTAAATATTGCCAGTCT
TGCAAAACCGGATATGTGGAAGAAGATATTGATGGCCGTTCTGGTGTTCT
TGTATCGTTTGATCATGACGCCGAGTTTTTGTGTTTTATCAGCCGTTTTG
TATCTGTTGGGTGATCATATAAGGATGACTGGGAAACGAATTTCCCAACA
AAAAACAGATGGCTTCAGATAAGGTTTGCATTCTCACTGATCAAGACGAA
TTAAGTGAAGAGAATCTGGAGGATGATCAGAACTTTGGAATTTCATTCTC
CAACAGTACACTGGTGATGGAAAATGACAACCAGGACGAAAAATCACCAA
AAATTGAAAACCAACAGGAGAATCGGTTTCAAGAATCAAGAAGAGAGCAA
TCTGAAAGCATGTCTCTGAATGAGTCAGAAAGTAATTCATCCGAAAGCAA
CCCTAGTGAGGACTCAAGTTATAAACCAACAAAGAAGAATCGATCCAAAA
GCAATCCCACTGAAGATTCTACCTTTGCAAAAAGAGTCAAAAATCGATCA
AAAAGCGACCCATCTAGGACATCTATCTCGTCGTTAGGATCAATCAACTT
TACTGGATCCTCAGTGATTTCGCCAGTGATCGAATCTGCCAACAATTCAA
CCGAAGACGAAAACAGAGACTTCGAGATTGTGAGAATTCCTGCTGAGAAT
GAAATGGAGATTATGAAGAACAACAATGATCCACAAAATGAAGACCAGAT
CTTGGAGAATATCAATATTTATAAATCATGGTGGAAATACCCGTTAATTT
TTTCAGGACTCTTAGGATCACAGCCTGCTCCTCGAGAAAAGAAATCCAAA
AGATATTGTAGCACATTATGCTTTAGGCGTCTCCTTATATTCGTTTTATT
TCTATTTCTTCTGGTCCTGAAATTTGATGGATTATTCCAAATGAGTTGGA
TACTACTTGAATCAAAGTTTCCGTTCACCGTTATCAATAATGTGGTCTGG
GAGCTGCGATGGATTTTAACGTTCTTTCTCTGCATGCTTTTTATGGATAA
AGGTGGATTTCATAATTTCTTGAGTCATGTAGAAATCTCACGAAAAAAAT
GGTATGAAAATGCAAGAAAGATGCGGACCTACATCGGTGTTGTTTTTGAA
ATGAAGAAGCATTTTGAGAAAATGAACAAAGCTGTTGGACCAGAGACCAA
CGACTCCAAAGAAAACGATGGTAACGGTCAACAAAGTGAAATCAAAGCTG
AAGATCTCCAAAAAGCTTACGAACTCATTGGAGATGTCCAACAACGCCAA
ATCCAATTGATGGAGAAGCTAGTCCAAAATAATTATCACCACAAGCAAAA
CACAACAATCGAATCTAGCCTGCAATCGACACCCTACATCATGAACGTAT
TGGGTTCCATACCAGACAGCTATCGCAAAGTTCGTGTTGTGTTAGACATG
TCCATGATGTTAATCGAGATCTTACTTCTATACATGGCGCCATTATGTCT
TATTGTACGGACCGACTACCAGCTACGGGAAGTTATCCACAAAGCATGGG
ATATCAATATCAGTCAACAAATCAATAAAAATCTGGCAATTACTACTTAT
AGTATGAAAGAACATTTGATAGCACAAATTAAAGATATAAAAGGCTTTAG
AGTGTGTGGATACAGGGTTGAATTCTTCAAAACTTTGATTATAGCATCTT
TCGGACCTTTCTTAGCCATTGCTATGAGAGCAACTTTACAACACTATGGA
ATCAAGTAAATTGGAATTCACATACAAGTCGAACGATGGAAACAATACGT
CAGGTGGAGTTGTTCGAGTAAAAATTATCGATCAAGGACCTGCAGCAAAT
CTCCCAATCACCGACTTAATAAATTTGAAAACTAATTTCATTCAAACGAT
GCACATGATCTGGTCCGTAAAATGCGAAAGTTGATCACAGAGACTGAGCA
CTCCCTACAAATTAACATTGTGGTTCATATGTTTCTTGTGTTTTGTGTCT
CCTTCACCACAGCTATGTCTACGTTAGAAAGGTCATCACAGTTTTCGCCC
CACCGATGTTTGTTTTCTTGGATCAGAATTGGTTAAATATTGCCAGTCTT
GCAAAACCGGATATGTGGAAGAAGATATTGATGGCCGTTCTGGTGTTCTT
GTATCGTTTGATCATGACGCCGAGTTTTTGTGTTTTATCAGCCGTTTTGT
ATCTGTTGGGTGATCATATAAGGATGACTGGGAAACGAATTTCCCAACAA
AAAACAGATGGCTTCAGATAAGGTTTGCATTCTCACTGATCAAGACGAAT
TAAGTGAAGAGAATCTGGAGGATGATCAGAACTTTGGAATTTCATTCTCC
AACAGTACACTGGTGATGGAAAATGACAACCAGGACGAAAAATCACCAAA
AATTGAAAACCAACAGGAGAATCGGTTTCAAGAATCAAGAAGAGAGCAAT
CTGAAAGCATGTCTCTGAATGAGTCAGAAAGTAATTCATCCGAAAGCAAC
CCTAGTGAGGACTCAAGTTATAAACCAACAAAGAAGAATCGATCCAAAAG
CAATCCCACTGAAGATTCTACCTTTGCAAAAAGAGTCAAAAATCGATCAA
AAAGCGACCCATCTAGGACATCTATCTCGTCGTTAGGATCAATCAACTTT
ACTGGATCCTCAGTGATTTCGCCAGTGATCGAATCTGCCAACAATTCAAC
CGAAGACGAAAACAGAGACTTCGAGATTGTGAGAATTCCTGCTGAGAATG
AAATGGAGATTATGAAGAACAACAATGATCCACAAAATGAAGACCAGATC
TTGGAGAATATCAATATTTATAAATCATGGTGGAAATACCCGTTAATTTT
TTCAGGACTCTTAGGATCACAGCCTGCTCCTCGAGAAAAGAAATCCAAAA
GATATTGTAGCACATTATGCTTTAGGCGTCTCCTTATATTCGTTTTATTT
CTATTTCTTCTGGTCCTGAAATTTGATGGATTATTCCAAATGAGTTGGAT
ACTACTTGAATCAAAGTTTCCGTTCACCGTTATCAATAATGTGGTCTGGG
AGCTGCGATGGATTTTAACGTTCTTTCTCTGCATGCTTTTTATGGATAAA
GGTGGATTTCATAATTTCTTGAGTCATGTAGAAATCTCACGAAAAAAATG
GTATGAAAATGCAAGAAAGATGCGGACCTACATCGGTGTTGTTTTTGAAA
TGAAGAAGCATTTTGAGAAAATGAACAAAGCTGTTGGACCAGAGACCAAC
GACTCCAAAGAAAACGATGGTAACGGTCAACAAAGTGAAATCAAAGCTGA
AGATCTCCAAAAAGCTTACGAACTCATTGGAGATGTCCAACAACGCCAAA
TCCAATTGATGGAGAAGCTAGTCCAAAATAATTATCACCACAAGCAAAAC
ACAACAATCGAATCTAGCCTGCAATCGACACCCTACATCATGAACGTATT
GGGTTCCATACCAGACAGCTATCGCAAAGTTCGTGTTGTGTTAGACATGT
CCATGATGTTAATCGAGATCTTACTTCTATACATGGCGCCATTATGTCTT
ATTGTACGGACCGACTACCAGCTACGGGAAGTTATCCACAAAGCATGGGA
TATCAATATCAGTCAACAAATCAATAAAAATCTGGCAATTACTACTTATA
GTATGAAAGAACATTTGATAGCACAAATTAAAGATATAAAAGGCTTTAGA
GTGTGTGGATACAGGGTTGAATTCTTCAAAACTTTGATTATAGCATCTTT
CGGACCTTTCTTAGCCATTGCTATGAGAGCAACTTTACAACACTATGGAA
TCAAGTAAATTGGAATTCACATACAAGTCGAACGATGGAAACAATACGTC
AGGTGGAGTTGTTCGAGTAAAAATTATCGATCAAGGACCTGCAGCAAATC
TCCCAATCACCGACTTAATAAATTTGAAAACTAATTTCATTCAAACGATG
CACATGATCTGGTCCGTAAAATGCGAAAGTTGATCACAGAGACTGAGCAC
TCCCTACAAATTAACATTGTGGTTCATATGTTTCTTGTGTTTTGTGTCTC
CTTCACCACAGCTATGTCTACGTTAGAAAGGTCATCACAGTTTTCGCCCC
ACCGATGTTTGTTTTCTTGGATCAGAATTGGTTAAATATTGCCAGTCTTG
CAAAACCGGATATGTGGAAGAAGATATTGATGGCCGTTCTGGTGTTCTTG
TATCGTTTGATCATGACGCCGAGTTTTTGTGTTTTATCAGCCGTTTTGTA
TCTGTTGGGTGATCATATAAGGATGACTGGGAAACGAATTTCCCAACAAA
AAACAGATGGCTTCAGATAAGGTTTGCATTCTCACTGATCAAGACGAATT
AAGTGAAGAGAATCTGGAGGATGATCAGAACTTTGGAATTTCATTCTCCA
ACAGTACACTGGTGATGGAAAATGACAACCAGGACGAAAAATCACCAAAA
ATTGAAAACCAACAGGAGAATCGGTTTCAAGAATCAAGAAGAGAGCAATC
TGAAAGCATGTCTCTGAATGAGTCAGAAAGTAATTCATCCGAAAGCAACC
CTAGTGAGGACTCAAGTTATAAACCAACAAAGAAGAATCGATCCAAAAGC
AATCCCACTGAAGATTCTACCTTTGCAAAAAGAGTCAAAAATCGATCAAA
AAGCGACCCATCTAGGACATCTATCTCGTCGTTAGGATCAATCAACTTTA
CTGGATCCTCAGTGATTTCGCCAGTGATCGAATCTGCCAACAATTCAACC
GAAGACGAAAACAGAGACTTCGAGATTGTGAGAATTCCTGCTGAGAATGA
AATGGAGATTATGAAGAACAACAATGATCCACAAAATGAAGACCAGATCT
TGGAGAATATCAATATTTATAAATCATGGTGGAAATACCCGTTAATTTTT
TCAGGACTCTTAGGATCACAGCCTGCTCCTCGAGAAAAGAAATCCAAAAG
ATATTGTAGCACATTATGCTTTAGGCGTCTCCTTATATTCGTTTTATTTC
TATTTCTTCTGGTCCTGAAATTTGATGGATTATTCCAAATGAGTTGGATA
CTACTTGAATCAAAGTTTCCGTTCACCGTTATCAATAATGTGGTCTGGGA
GCTGCGATGGATTTTAACGTTCTTTCTCTGCATGCTTTTTATGGATAAAG
GTGGATTTCATAATTTCTTGAGTCATGTAGAAATCTCACGAAAAAAATGG
TATGAAAATGCAAGAAAGATGCGGACCTACATCGGTGTTGTTTTT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_002116XLOC_002116Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00003800-exon-sc0000031-1575043694:470399..471623TCONS_00003800-exon-sc0000031-1575043694:470399..471623Clytia hemisphaericaexon
TCONS_00003800-exon-sc0000031-1575043694:469940..470165TCONS_00003800-exon-sc0000031-1575043694:469940..470165Clytia hemisphaericaexon
TCONS_00003800-exon-sc0000031-1575043694:469514..469652TCONS_00003800-exon-sc0000031-1575043694:469514..469652Clytia hemisphaericaexon
TCONS_00003800-exon-sc0000031-1575043694:466423..466555TCONS_00003800-exon-sc0000031-1575043694:466423..466555Clytia hemisphaericaexon
TCONS_00003800-exon-sc0000031-1575043694:464876..465571TCONS_00003800-exon-sc0000031-1575043694:464876..465571Clytia hemisphaericaexon
TCONS_00003800-exon-sc0000031-1510915933:470399..471623TCONS_00003800-exon-sc0000031-1510915933:470399..471623Clytia hemisphaericaexon
TCONS_00003800-exon-sc0000031-1510915933:469940..470165TCONS_00003800-exon-sc0000031-1510915933:469940..470165Clytia hemisphaericaexon
TCONS_00003800-exon-sc0000031-1510915933:469514..469652TCONS_00003800-exon-sc0000031-1510915933:469514..469652Clytia hemisphaericaexon
TCONS_00003800-exon-sc0000031-1510915933:466423..466555TCONS_00003800-exon-sc0000031-1510915933:466423..466555Clytia hemisphaericaexon
TCONS_00003800-exon-sc0000031-1510915933:464876..465571TCONS_00003800-exon-sc0000031-1510915933:464876..465571Clytia hemisphaericaexon
TCONS_00003800-exon-sc0000031-1491911889:470399..471623TCONS_00003800-exon-sc0000031-1491911889:470399..471623Clytia hemisphaericaexon
TCONS_00003800-exon-sc0000031-1491911889:469940..470165TCONS_00003800-exon-sc0000031-1491911889:469940..470165Clytia hemisphaericaexon
TCONS_00003800-exon-sc0000031-1491911889:469514..469652TCONS_00003800-exon-sc0000031-1491911889:469514..469652Clytia hemisphaericaexon
TCONS_00003800-exon-sc0000031-1491911889:466423..466555TCONS_00003800-exon-sc0000031-1491911889:466423..466555Clytia hemisphaericaexon
TCONS_00003800-exon-sc0000031-1491911889:464876..465571TCONS_00003800-exon-sc0000031-1491911889:464876..465571Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00003800-proteinTCONS_00003800-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000031supercontigsc0000031:464876..471623 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0	0.0237757	0	0	0	0.61804	0.516397	0.81395	1.979	1.15099	0.35103	2.83527	2.50318	6.43639	6.33703	1.81473	1.99233	4.11798	3.34232	0.891878	0.717713	1.06	0.977825	3.37578	6.58931	0.124822	0.201587	4.5425	3.18765
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00003800 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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