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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00003794 ID=TCONS_00003794|Name=TCONS_00003794|organism=Clytia hemisphaerica|type=transcript|length=3492bp
ataaaaatgtaaaaacaaagattaaaaaatgaagaaaaagaaaatcaaca
ccTTGtagaagttaagaacatctgaaggtttcaaaaaatgttggatgttt
ttATGAAATAACGTGTACACTTGATTCGCCActatttttttaatgttcac
CTTGCTGATGATTTAAAAGTGAATGTATATTAAATAGGATCAGTGGTTAT
GCTGAAAGTTAGGATTTTGGGTAGAATACTggccagtctgtaaaatacca
accatgCATGTTTTCTCCTACTAAGATAGGAAGGTGTTTGAAAGgttcaa
cctcgtccccgtgtattccaggctttatatTACGTTACTGTGATTGACGC
tagagaatattatctagcgccatcaagaaacaaaaaaagctGATGATGCG
CAGGGAGCGAGGTTGGGAAGAGTTGATTTATTGAAAGATAAGTCTGTTAT
CATTTCTTTTAGTTCTTCAATTtccgtttatttatttttcagacatGAGA
TATTTAAATAAATTAATACAACAAAGTAGAGTAATATTACTTCGCAATAC
ACAACAACAACTAGTCTACCAAAGCAAAAGAAACACCAGTTATGAGCAGA
ATATACCTGAATTAACATTATACTCGAAGGCAGAAAGTTGTTCATTGTGC
GACGATGCAAAAGAAGTTCTTATCAAGCATTGTCATTTGTTCGTGTTCAA
TGAAGTAGACATTACAGCTGAGGGGAATGAACATTGGTACCACCTTTATA
AACATGATATCCCAGTTGTCCACATCAATGGTAAAGAAATCATGAGACAC
AGAGTCTTTGATAATGTACTCTTAGATGCACTGGAACTTGCTTCTGGTAG
AAAACCTTCTTGATCGTGCGCGCGCATGCGTAGTTTGATGGAGAAATATC
TTGTAAATAGAATAAATCATTTACTGAGTTGATTCTTTGAAATCAATACT
TAATGTAATGAATTGTGGTATAggcgttgtggtatagtggacatcaacct
tgattcctgtacaggcgaccaaggttcgattcccactcacaacggttcac
cttcgcccgggtcaacccatgNTACAGgcgaccaaggttcgattcccact
cgcaacggtttaccttcgcccgggtcaacccatgacatgtaaggggaatt
gggtagtcagttcaaggtgctgacgggatgcttactcaaaagcatctata
gttgcgagaatgggctcccagagcctcctgtaactcaaccataatagata
GTATTGATGGATTTCCTCGTGTTGAAATGCTTTTCGTTGCGAATTGGGGA
TATTTGATGTGCAGTAAACTCTCGCCTaatcgaacttctattattcgaat
ctttctataattcgaacttattcccaGTCCCCGTCAAGAAAAACCCTCTT
GtcacactttctttaattcgaatctctctgtaattcgaacagtAAAGATT
ACACGaatcgagttcgaattagcgagagtcatcTGTTTATTGTAACTCAA
AATTTTAGTGGAGCATTGTAAAGTATCCTTTTTAACTGAGTGATCTGGTG
AAGACAGTCAGTTATAAAAGGATCAAAATATTAATCAGGCTGAAAAACCT
CTTGATTTTAGTAAAAGCTCAAAAGCCCagtatgaattttgaaaattttg
atatatttcatatttcatagGGGTTTTAAAAAAGACCGTGTTATTATCTC
AGTGGGGTGAAATTTTAGGGTGTTTTTCTCCAttggttttttgacaaaat
tctcGAGAGATGTTTGAAAGGTGTGTAAAGGAACAAATATTAAGTATTTT
TCAAATCTAATCACATATTTTTTCTTACTGTTAAGGTTAattaaaacaaa
tgaaataaagaGTTCCAGCAAGTGCAAAGTTGGGTAGCATAAAAGCTAGG
TACGTGTGTTCTAGCACGGTACATCAGATAATGCAATTATAAAGAGCTGA
TAATGGATTGTGAAAGTATTGTCGAGGTGGAGCAAGAATCAAATGGAGAC
ATTATAACTACAGATGATTTGGTGACCAAATATAAAGGTCGTTTTGTTAA
ATCACGTGATCATGATATTAATTACCAGTCCACATCAAGTTGCTTAGTAA
CAGGtgaccaagcaaaatctttttacGATACTATAATAAATACAACATCA
TCGAAAAGGAAGGATGGTAAGAAGAAAAAACGTAAACGCAGTTCTCGGAA
TTCTAAATCCGTGTCAGAATCCGTACCATTTTCTCTTGATGCAGTAAAGA
AATACGTAGCCACGCTTTTCTGTCTTTGCGAGAATCGTAAGAACGTGAAA
GACCTCAAAAGCCACTTACGAGCCTTGTCAACGAATCGCGACTTCCACAA
ATTCATCAATTCTTCTGATCAGTATGGGTGGTCCGCCCTTATGAGTGCTT
CAGCTTCTAATAATCTGGAAGCTGTCAAATTACTCATTAATTATGGTGCT
AGATACCGAAACCTTTCCGATAAAGCTGGTAATAGTGTCCAAGATATTTG
TAAACGAAATGATGCGTTAGATGTTTTGAATTATTTGGCTTCATTAGAGG
AAGATTCTAAAAGGATGATCAAAAATGAGTTTCCGAATGATGAGGATGGA
CCCAATATACCAACAAATAAAAGTGGTTCTAGTAGATCTGGTGTGAGAAG
TGATGATTGTTCGATATCTGGAACAAATACTGTCAACAGGTCAAATAGTA
AGCATTCAAGCTTTTCTCGAAATAAGAAACCATCTGGAAATGCTCCCACC
GATAGCTGTACCTTCACTAGGAGTTCTAGAACGTACACTGCAATAAACGA
TTCAAATGAACGTCCTTGTTCATCTCAAGATATTGATGATGTCAGCACAA
ATTCATGGAGTGAAGCAGCAGATATTAGAATGTCTAGTGTAAGCAATAAT
GACGAAGAAACTTGTGAGTTATGTGGAGTTTCATTCCCAACCTCCTTCAA
GAAGCAACACGAAACATCCATGACTCATCTCCTGAAAGACACTTCAAAAA
CATTACCCGATAGTTCGTATACCATCCCGGAACATAATGTCGGGTTTCAA
ATGATGTTACGGACAGGTTGGGAACAAGAGGGTCTGGGACCTGACGGCGC
TGGTCGTAAAAAGCCAATCAAGACAGTTTTGAAACTTGATAAGAGTGGGC
TGGGTTTACATAAAACGAAAGAAAGGGTTAGTCATTTTGCTGCTTTTGAA
GAAAAGGCTATTGGTAAAAGAACTCATGATGATATTATGAAAACGGAACG
TAGAAAAAGGAAAGGAAAGTCGGGAACGGATGGTAATTTGTCTCAGTGGA
AACAACAGAAAAAGAAATCTCGTTTTTGGGAAAGAGATCTGAGGAGATAT
ATGTCGTCGAATGATTAGGTGGCTGGATGATGATTTTTATCTTAACTTAT
TAACTGATTAATATATACGATGTGAAAAGAAGTATGgtggaaatcttttt
tttgaataatttgaaaaatattattgcgAATCTATACCAATT Run BLAST on NCBI protein sequence of TCONS_00003794-protein >TCONS_00003794-protein ID=TCONS_00003794-protein|Name=TCONS_00003794-protein|organism=Clytia hemisphaerica|type=polypeptide|length=471bp
MDCESIVEVEQESNGDIITTDDLVTKYKGRFVKSRDHDINYQSTSSCLVT
GDQAKSFYDTIINTTSSKRKDGKKKKRKRSSRNSKSVSESVPFSLDAVKK
YVATLFCLCENRKNVKDLKSHLRALSTNRDFHKFINSSDQYGWSALMSAS
ASNNLEAVKLLINYGARYRNLSDKAGNSVQDICKRNDALDVLNYLASLEE
DSKRMIKNEFPNDEDGPNIPTNKSGSSRSGVRSDDCSISGTNTVNRSNSK
HSSFSRNKKPSGNAPTDSCTFTRSSRTYTAINDSNERPCSSQDIDDVSTN
SWSEAADIRMSSVSNNDEETCELCGVSFPTSFKKQHETSMTHLLKDTSKT
LPDSSYTIPEHNVGFQMMLRTGWEQEGLGPDGAGRKKPIKTVLKLDKSGL
GLHKTKERVSHFAAFEEKAIGKRTHDDIMKTERRKRKGKSGTDGNLSQWK
QQKKKSRFWERDLRRYMSSND Run BLAST on NCBI transcript from alignment at sc0000031:264674..269570- Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00003794 ID=TCONS_00003794|Name=TCONS_00003794|organism=Clytia hemisphaerica|type=transcript|length=4897bp|location=Sequence derived from alignment at sc0000031:264674..269570- (Clytia hemisphaerica)
ATAAAAATGTAAAAACAAAGATTAAAAAATGAAGAAAAAGAAAATCAACA
CCTTGTAGAAGTTAAGAACATCTGAAGGTTTCAAAAAATGTTGGATGTTT
TTATGAAATAACGTGTACACTTGATTCGCCACTATTTTTTTAATGTTCAC
CTTGCTGATGATTTAAAAGTGAATGTATATTAAATAGGATCAGTGGTTAT
GCTGAAAGTTAGGATTTTGGGTAGAATACTGGCCAGTCTGTAAAATACCA
ACCATGCATGTTTTCTCCTACTAAGATAGGAAGGTGTTTGAAAGGTTCAA
CCTCGTCCCCGTGTATTCCAGGCTTTATATTACGTTACTGTGATTGACGC
TAGAGAATATTATCTAGCGCCATCAAGAAACAAAAAAAGCTGATGATGCG
CAGGGAGCGAGGTTGGGAAGAGTTGATTTATTGAAAGATAAGTCTGTTAT
CATTTCTTTTAGTTCTTCAATTTCCGTTTATTTATTTTTCAGACATGAGA
TATTTAAATAAATTAATACAACAAAGTAGAGTAATATTACTTCGCAATAC
ACAACAACAACTAGTCTACCAAAGCAAAAGAAACACCAGTTATGAGCAGA
ATATACCTGAATTAACATTATACTCGAAGGTAGATCATTCTTCTAAGCTC
TGGTTAAGACGGTCGACTTTCTGCCCTGCCTATTCTAATTGTTTGAGAAG
GCGAACACTGAGCGCACAGTTGGCAGTTAAAGATCATGTTCAGACGTTAC
GATTCCGTTTCGCTCCGAAATGAAATGAAGCTATTTTATTGGTTACATCC
AAGTTTTACATTACTTTTAACCAATAGAACGGCTTCTTTTTGTCATGTGT
GAACATGGTCAAAATCTTTGCTTGGAAAAGATTGAAAGAAAACATTGCAT
TGGCGTCAAAAGAGGGCTTTAGACAGCCAACTATCTGTCCACTTTAATTC
ACAATTAGAATAGCCAGGGTGAAAAGTGGGCCGTCTAAACTGGAGCTTAA
TTATTTATTACTTTCAGTCTAGTGTACTCTAAGGTATTTTAACATTTGTA
CCCTGATTTCATTACATTAGTTTGTTAAAATTCCAAGAGTTTTTATGGAA
TGATATCGTGAATTGAGGTATATCAGTGATTTCGTTCTCTATCTTCCCAT
AGGCAGAAAGTTGTTCATTGTGCGACGATGCAAAAGAAGTTCTTATCAAG
CATTGTCATTTGGTATGTATAGATCAGTAGCGTAGCCATTGGGGCGCAAA
ATTTGTGTTAGAGAGTAGATTTTTATAACACTGTATTTATCTATTCATAA
TATATAATATATAGATAATTACAGTGTAATAAAAATCTGCTCTCTTAAAC
AAACTTTGCGCCCCTCTTGGCTACGCTACTGTAGACCAATGTCAAACTTA
CCAGACGTAATCGAATCTTTATCTGAAACTCACCATTCGATCTCTATGTC
GTTTATTGTCGATTATTCTCTATGTCGATCTCTATGTCGAACTTTAATCG
AACCACAACCGAATCTGAAGATCAGGGTAATAATCGATTGAGTTTCGATT
GCGATTGTTTGATGTACGATTTCGTTCGATTGGCATCGTCTGTGAAATTC
TTGGTGGTGGATGTCTAAGGTATATTTGCAAAGAAGATTTTGTATCAGAC
CACATCTAGATATCACAAAGGAACGTTTTGATAATGCTTTTTTTTGTGCA
CAGGTTCAAGCCTATTGACAGTAGACTAACTTATATTATTCAAATCCTTC
TATAATTCGAACTTATTCCCAGCTTCTGTCAAGAAGAAATCCTCTCAACA
TACTTTCTTCAAGTTAAGGAGCCTGTACTAGCCGACCACACGATTTTGAT
ACGAAGTTGCTGGAAAAATGCATCTCCGGCTGGTGCAGGCCTAGTTGACC
TTCGCCAACAAGTACTTTTCCTCGATACATTTTTGCACGCAATGAATCTC
ATCTATTTTACTTAAGCTAATTAACTAATTGATTTTTCCATTCATCTCAG
CCGAGAGGTCTGACTTGAGTGTACTATTTTCAGACTAGAGTCTACTAGTC
TCATACTATATTCAACTAGCTTATATCCACTCTTTTTCTTTCAGTTCGTG
TTCAATGAAGTAGACATTACAGCTGAGGGGAATGAACATTGGTACCACCT
TTATAAACATGATATCCCAGTTGTCCACATCAATGGTAAAGAAATCATGA
GACACAGAGTCTTTGATAATGTACTCTTAGATGCACTGGAACTTGCTTCT
GGTAGAAAACCTTCTTGATCGTGCGCGCGCATGCGTAGTTTGATGGAGAA
ATATCTTGTAAATAGAATAAATCATTTACTGAGTTGATTCTTTGAAATCA
ATACTTAATGTAATGAATTGTGGTATAGGCGTTGTGGTATAGTGGACATC
AACCTTGATTCCTGTACAGGCGACCAAGGTTCGATTCCCACTCACAACGG
TTCACCTTCGCCCGGGTCAACCCATGNTACAGGCGACCAAGGTTCGATTC
CCACTCGCAACGGTTTACCTTCGCCCGGGTCAACCCATGACATGTAAGGG
GAATTGGGTAGTCAGTTCAAGGTGCTGACGGGATGCTTACTCAAAAGCAT
CTATAGTTGCGAGAATGGGCTCCCAGAGCCTCCTGTAACTCAACCATAAT
AGATAGTATTGATGGATTTCCTCGTGTTGAAATGCTTTTCGTTGCGAATT
GGGGATATTTGATGTGCAGTAAACTCTCGCCTAATCGAACTTCTATTATT
CGAATCTTTCTATAATTCGAACTTATTCCCAGTCCCCGTCAAGAAAAACC
CTCTTGTCACACTTTCTTTAATTCGAATCTCTCTGTAATTCGAACAGTAA
AGATTACACGAATCGAGTTCGAATTAGCGAGAGTCATCTGTTTATTGTAA
CTCAAAATTTTAGTGGAGCATTGTAAAGTATCCTTTTTAACTGAGTGATC
TGGTGAAGACAGTCAGTTATAAAAGGATCAAAATATTAATCAGGCTGAAA
AACCTCTTGATTTTAGTAAAAGCTCAAAAGCCCAGTATGAATTTTGAAAA
TTTTGATATATTTCATATTTCATAGGGGTTTTAAAAAAGACCGTGTTATT
ATCTCAGTGGGGTGAAATTTTAGGGTGTTTTTCTCCATTGGTTTTTTGAC
AAAATTCTCGAGAGATGTTTGAAAGGTGTGTAAAGGAACAAATATTAAGT
ATTTTTCAAATCTAATCACATATTTTTTCTTACTGTTAAGGTTAATTAAA
ACAAATGAAATAAAGAGTTCCAGCAAGTGCAAAGTTGGGTAGCATAAAAG
CTAGGTACGTGTGTTCTAGCACGGTACATCAGATAATGCAATTATAAAGA
GCTGATAATGGATTGTGAAAGTATTGTCGAGGTGGAGCAAGAATCAAATG
GAGACATTATAACTACAGATGATTTGGTGACCAAATATAAAGGTCGTTTT
GTTAAATCACGTGATCATGATATTAATTACCAGTCCACATCAAGTTGCTT
AGTAACAGGTGACCAAGCAAAATCTTTTTACGATACTATAATAAATACAA
CATCATCGAAAAGGAAGGATGGTAAGAAGAAAAAACGTAAACGCAGTTCT
CGGAATTCTAAATCCGTGTCAGAATCCGTACCATTTTCTCTTGATGCAGT
AAAGAAATACGTAGCCACGCTTTTCTGTCTTTGCGAGAATCGTAAGAACG
TGAAAGACCTCAAAAGCCACTTACGAGCCTTGTCAACGAATCGCGACTTC
CACAAATTCATCAATTCTTCTGATCAGTATGGGTGGTCCGCCCTTATGAG
TGCTTCAGCTTCTAATAATCTGGAAGCTGTCAAATTACTCATTAATTATG
GTGCTAGATACCGAAACCTTTCCGATAAAGCTGGTAATAGTGTCCAAGAT
ATTTGTAAACGAAATGATGCGTTAGATGTTTTGAATTATTTGGCTTCATT
AGAGGAAGATTCTAAAAGGATGATCAAAAATGAGTTTCCGAATGATGAGG
ATGGACCCAATATACCAACAAATAAAAGTGGTTCTAGTAGATCTGGTGTG
AGAAGTGATGATTGTTCGATATCTGGAACAAATACTGTCAACAGGTCAAA
TAGTAAGCATTCAAGCTTTTCTCGAAATAAGAAACCATCTGGAAATGCTC
CCACCGATAGCTGTACCTTCACTAGGAGTTCTAGAACGTACACTGCAATA
AACGATTCAAATGAACGTCCTTGTTCATCTCAAGATATTGATGATGTCAG
CACAAATTCATGGAGTGAAGCAGCAGATATTAGAATGTCTAGTGTAAGCA
ATAATGACGAAGAAACTTGTGAGTTATGTGGAGTTTCATTCCCAACCTCC
TTCAAGAAGCAACACGAAACATCCATGACTCATCTCCTGAAAGACACTTC
AAAAACATTACCCGATAGTTCGTATACCATCCCGGAACATAATGTCGGGT
TTCAAATGATGTTACGGACAGGTTGGGAACAAGAGGGTCTGGGACCTGAC
GGCGCTGGTCGTAAAAAGCCAATCAAGACAGTTTTGAAACTTGATAAGAG
TGGGCTGGGTTTACATAAAACGAAAGAAAGGGTTAGTCATTTTGCTGCTT
TTGAAGAAAAGGCTATTGGTAAAAGAACTCATGATGATATTATGAAAACG
GAACGTAGAAAAAGGAAAGGAAAGTCGGGAACGGATGGTAATTTGTCTCA
GTGGAAACAACAGAAAAAGAAATCTCGTTTTTGGGAAAGAGATCTGAGGA
GATATATGTCGTCGAATGATTAGGTGGCTGGATGATGATTTTTATCTTAA
CTTATTAACTGATTAATATATACGATGTGAAAAGAAGTATGGTGGAAATC
TTTTTTTTGAATAATTTGAAAAATATTATTGCGAATCTATACCAATT Coding sequence (CDS) from alignment at sc0000031:264674..269570- >TCONS_00003794 ID=TCONS_00003794|Name=TCONS_00003794|organism=Clytia hemisphaerica|type=CDS|length=1416bp|location=Sequence derived from alignment at sc0000031:264674..269570- (Clytia hemisphaerica)
ATGGATTGTGAAAGTATTGTCGAGGTGGAGCAAGAATCAAATGGAGACAT
TATAACTACAGATGATTTGGTGACCAAATATAAAGGTCGTTTTGTTAAAT
CACGTGATCATGATATTAATTACCAGTCCACATCAAGTTGCTTAGTAACA
GGTGACCAAGCAAAATCTTTTTACGATACTATAATAAATACAACATCATC
GAAAAGGAAGGATGGTAAGAAGAAAAAACGTAAACGCAGTTCTCGGAATT
CTAAATCCGTGTCAGAATCCGTACCATTTTCTCTTGATGCAGTAAAGAAA
TACGTAGCCACGCTTTTCTGTCTTTGCGAGAATCGTAAGAACGTGAAAGA
CCTCAAAAGCCACTTACGAGCCTTGTCAACGAATCGCGACTTCCACAAAT
TCATCAATTCTTCTGATCAGTATGGGTGGTCCGCCCTTATGAGTGCTTCA
GCTTCTAATAATCTGGAAGCTGTCAAATTACTCATTAATTATGGTGCTAG
ATACCGAAACCTTTCCGATAAAGCTGGTAATAGTGTCCAAGATATTTGTA
AACGAAATGATGCGTTAGATGTTTTGAATTATTTGGCTTCATTAGAGGAA
GATTCTAAAAGGATGATCAAAAATGAGTTTCCGAATGATGAGGATGGACC
CAATATACCAACAAATAAAAGTGGTTCTAGTAGATCTGGTGTGAGAAGTG
ATGATTGTTCGATATCTGGAACAAATACTGTCAACAGGTCAAATAGTAAG
CATTCAAGCTTTTCTCGAAATAAGAAACCATCTGGAAATGCTCCCACCGA
TAGCTGTACCTTCACTAGGAGTTCTAGAACGTACACTGCAATAAACGATT
CAAATGAACGTCCTTGTTCATCTCAAGATATTGATGATGTCAGCACAAAT
TCATGGAGTGAAGCAGCAGATATTAGAATGTCTAGTGTAAGCAATAATGA
CGAAGAAACTTGTGAGTTATGTGGAGTTTCATTCCCAACCTCCTTCAAGA
AGCAACACGAAACATCCATGACTCATCTCCTGAAAGACACTTCAAAAACA
TTACCCGATAGTTCGTATACCATCCCGGAACATAATGTCGGGTTTCAAAT
GATGTTACGGACAGGTTGGGAACAAGAGGGTCTGGGACCTGACGGCGCTG
GTCGTAAAAAGCCAATCAAGACAGTTTTGAAACTTGATAAGAGTGGGCTG
GGTTTACATAAAACGAAAGAAAGGGTTAGTCATTTTGCTGCTTTTGAAGA
AAAGGCTATTGGTAAAAGAACTCATGATGATATTATGAAAACGGAACGTA
GAAAAAGGAAAGGAAAGTCGGGAACGGATGGTAATTTGTCTCAGTGGAAA
CAACAGAAAAAGAAATCTCGTTTTTGGGAAAGAGATCTGAGGAGATATAT
GTCGTCGAATGATTAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00003794-exon-sc0000031-1575043694:268942..269570 | TCONS_00003794-exon-sc0000031-1575043694:268942..269570 | Clytia hemisphaerica | exon |
| TCONS_00003794-exon-sc0000031-1575043694:268359..268418 | TCONS_00003794-exon-sc0000031-1575043694:268359..268418 | Clytia hemisphaerica | exon |
| TCONS_00003794-exon-sc0000031-1575043694:264674..267476 | TCONS_00003794-exon-sc0000031-1575043694:264674..267476 | Clytia hemisphaerica | exon |
| TCONS_00003794-exon-sc0000031-1510915933:268942..269570 | TCONS_00003794-exon-sc0000031-1510915933:268942..269570 | Clytia hemisphaerica | exon |
| TCONS_00003794-exon-sc0000031-1510915933:268359..268418 | TCONS_00003794-exon-sc0000031-1510915933:268359..268418 | Clytia hemisphaerica | exon |
| TCONS_00003794-exon-sc0000031-1510915933:264674..267476 | TCONS_00003794-exon-sc0000031-1510915933:264674..267476 | Clytia hemisphaerica | exon |
| TCONS_00003794-exon-sc0000031-1491911889:268942..269570 | TCONS_00003794-exon-sc0000031-1491911889:268942..269570 | Clytia hemisphaerica | exon |
| TCONS_00003794-exon-sc0000031-1491911889:268359..268418 | TCONS_00003794-exon-sc0000031-1491911889:268359..268418 | Clytia hemisphaerica | exon |
| TCONS_00003794-exon-sc0000031-1491911889:264674..267476 | TCONS_00003794-exon-sc0000031-1491911889:264674..267476 | Clytia hemisphaerica | exon |
The following polypeptide feature(s) derives from this transcript:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000031 | supercontig | sc0000031:264674..269570 - |
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003676 | nucleic acid binding |
| GO:0005515 | protein binding |
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
| Category |
Term Accession |
Term Name |
| molecular_function |
GO:0003676 |
nucleic acid binding |
| molecular_function |
GO:0005515 |
protein binding |
Blast
BLAST of TCONS_00003794 vs. Swiss-Prot (Human)
Match: GPAN1 (G patch domain and ankyrin repeat-containing protein 1 OS=Homo sapiens GN=GPANK1 PE=1 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 2.457e-17 Identity = 55/150 (36.67%), Postives = 76/150 (50.67%), Query Frame = 3
Query: 2913 CELCGVSFPTSFKKQHETSMTHLLK-DTSKTLPDSSYTIPEHNVGFQMMLRTGWEQE-GLGPDGAGRKKPIKTVLKLDKSGLGLHKTKE-RVSHFAAFEEKAIGKRTHDDIMKTERRKRKGKSGTDGNLSQWKQQKKKSRFWERDLRRYM 3353
CE C F S H TS HLL P+ +P + GF+++LR GWE GLGP G GR PI TVLK D+ GLG + RV+HF A++ +A+ R + T + + +++++K R WERDLR YM
Sbjct: 218 CENCDTHFQDS---NHRTSTAHLLSLSQGPQPPNLPLGVPISSPGFKLLLRGGWEPGMGLGPRGEGRANPIPTVLKRDQEGLGYRSAPQPRVTHFPAWDTRAVAGRERPPRVATL------------SWREERRREEKDRAWERDLRTYM 352
The following BLAST results are available for this feature:
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