TCONS_00003789 (transcript) - C. hemisphaerica

Overview
NameTCONS_00003789
Unique NameTCONS_00003789
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length3889

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00003789 ID=TCONS_00003789|Name=TCONS_00003789|organism=Clytia hemisphaerica|type=transcript|length=3889bp
CTCAGATACACTTTCGACGTGTTCGATCGATGGAAATTTGAATGCTCCCT
GGGGCATACCGAATGAGAAAAAGTTGTATATATACAATATACCTACAACA
ATATAGGTTGAATTTAATCTTCTAGTGATGGGTTGTTAACATTTAATGTT
ATTTGTAGGTGTTATGGATATCAAAGGCATATTCTGGGGAAGAACCAGCA
GAGATATTTGCGAAACTCCGAGTGGTACTGTGACAGACTGTTACAACTCC
ACATTAGCTGTTTATCAACTGGAAAATGCAAAGACTTTTTGTAACAATGA
AACACAATGTAAATTAAAAGCATCATTCAATTTTGCGGATAAATGCAACA
ATATCATGTGGTTTGATCCGTGTGATGGAAAATCGAAATATCTGGATTTG
AATTATACCTGTACAGACACGAAAGCTAAAACGGATTACTATTCATCTTC
ACCATGGAGCCAATGGAACGCATGGTCAGCCACCTGTGGAGCCGCTCAAC
GCTCAAGAGAACGAGATTGTCAAAATCCACCTGAAAAACCATGTGGTTGT
AAAAATCAAGAATTAGGTGCTCAAAGAGATACTCCAGATGCTCGTTCAAA
TTCATGTCCAGAATCTACCTCAATTGTACCTGAAATGTCTTCATCGTCGT
CGATATCACCGTCCCCGTCCCCGTCACCATCACCATCCCCGTCACCATCA
CCATCCCCGTCCCCGTCACCATCACCGTCACCGTCACCGTCACCGTCACC
CTCCCCGTCATTATCACCCTCCCCGTCCCTGTCACCCTCCCCATCATCGT
CGTCGTCACCATCACCCTCACCCTCTCCGATTCCTTCTCCATCTATGGTC
GACTCTTCTTCCTCCTCAATACAACCCTCATCTTCACCATCTTCAAAAAG
CAGTAGCCACTTTGAGTTATCCCCCTCGCGTGATATGATGTCTtcaacaa
ctttttatgaagcaACTGAAAGCTTAAATCCTTCAAGCTCAAGCCAAAGC
GCATATACACAATTGCTTTCTCTTTCACCATCGCCGATGTCGTCCTCACC
GATCCATGAAGCTTCATCATCGGCAATCGTTGTTGTTGTCCCTACCACTA
CTGGACTACCAAGCTTCTTTGTCACTGCTTCTTTGACCTTAATATGGGAA
GACTTTTGTAAACATTCACTAGAGTTTAGACAAGGAGTTGCCGCCCTATT
GACGAAGCGTTTGAACAAAAAACAATACGCAGATCAAGTCATCATCTTTA
ACATTGACAACTGCAACAATACCAACAAAGACCAGAAAGCTGTCGTTAAA
TTCTATATCGCTGTCAATAACAGCACAGCGACACCAAGTCAATCTTTAAC
AGTGTTGGCTGGTGAGTTATTGGCTGAACTCATTGAAGATGATGAAACTG
TTgtcattggtccaaatttcggAAAAGGAACTTTCATCATAATCAAGGAA
AAGGATGACGACGATGATTTGTCAGCATGGTTGATCATCCTCATCATCAT
TGCAGCCATCATCTTCTTGATCTGGTTGTGCTGTTGTTGTGCTATCTTTT
GTAGGAAAAGAAAGCGGGAAAAGAACCAACCACAACCACACCGTAAATAT
ACATTCACACCTTTCAATGGATATGAAACACCACACGTTCAACTACGAGA
CAACACTGAAATGGCATCCTTCTCAACAAACGTCATTAAATTAAATGTTA
ATGGAGATACGCCAAGTACACCAAAGTCTGAACGTTCACCCGATGGAATT
GAGAATCCTTCTTATGAGTTAGATGATGTTTCCAATGCACCTTCTACCTT
CCAACCATTGAAAGTAACATTGATGAACCCATCAGATAGTGAAGACGAAG
AAGATAACAAAAAGCCTTCAACCtcctcatcttcatcttcaagtGATTCA
GaaGATGAACCCAAAAAACAAGAAGATTTACCTCATCCACCAACACCTGT
TAATGATAACCCTTACCAACCTCTAACATTACAACTAAATATCACAGATC
CTCAGACAGGGAATACACCAGGTGGAGGTCCTTCTCCTTATCAACCATTA
TCGTTACAAATATCCCCAACTTCAGCACCAGTAACCAATAGCAATGATCC
GGATAAGCCTCCAGATTATGAAGAAATGCTTCCAAAGGAACCAGAGGAAG
atacaaaatcaataaaatcaaactCTTCTACCGATTCCGACAGCTCATCC
TCCTCCTCTTCGTCATCATCTGACAATCCTCTTAATGATTATGATAACCC
TGACAGACCTCCCACACCACCACCTACTTCAACACTTCCTCCACGATCAC
CAGGAGTCACCAGAGTTTTTATTGGTGGCAAATTGGTACGTGAAATTGGT
CAAGGTGATCCAAACAAAGCAATCCATGTTAAGATGACGACGACCATGTA
ATACACGAGTGAATGATGGCGGAGAAGTCAAACGTCCTAAAGAAGAACTG
TATTTTTAATAGGATTCAAATGGTTTTGATAGCGAAATTGCTTATTGATC
TGGTAGGATAATGATCTGTTATaaacacctccttctcacagacccggtag
gatttttttcagccaatgggggtaaaaataacagactgaaactcgCTAGG
AATCGATATTCCCACATTTTTTATGGATGGGGGGTCAAAAAGTTCAGTGG
GGGTGAGAAGAATaggataatattttgcagtgaagattgggtttatttga
tttgattatttccAGTGGGGAGGACTAAACTAACTAAATAATGACAATGA
TGTTTTAATGATAGTCTTTAAAggttaaaacacccctgtgttacAGAACC
Gctggaaaattggccaaaattgtgtccccggtggaaagaatacttccagc
cccactggatacttaactttgatttcatcccattTATTAAAATTCAATAG
GAAAAACCATCTTCTTTTTTTACCTAAGAACAATAGCTTAAGAGGTAGTC
CTCGGGCTAAACTCTACTCAGTGCCGTAGACACAAATTATATTTAGGGGG
GCCCTATATTTAGTATATAAGGAGGTTCccccatggttggggccgacggg
ccAGGAAAACTTTTGGACTTTATACCCTCCAGATTAGCTAAAAATGCCTC
TCCGAAAGTCAATTTTCAGCAAAAGGCAAGTAGAAATCGCGTGCATATTA
GTATATTTTCAAAGAGTCATTCATAAAActatcttttttgatggttactG
CGTtagttatttatttattttgttctgTGGCATGCGTCTGCTCAACGTAA
AAGTGGTAAAAAGAGTGAAGAGATTAAGCAAATAAATCAAATAAGTAAAT
ATAAAGACAACGGTGACGAAATTTACACCTTAACAAAAAAACACCATAAT
CTGAAAATCTTTTAGGGGGGGCCAGGCCCCCCACCCCCCAGTGGCTACAG
CACTGCTACTTCAAGAAAATTTCAAGAAGAACCAAACCCAAAACATAGAA
GAAATTGCAAACATGAGCGGTTAGAGGCCATTTGTCTAACTGTATAAATT
agattatttcgtagaggtcaatagacctgtgaaatacaCATCTATAAATT
AATAGGGTTTCTATCCAAATTATAATTTCGATAGAATTATCATCCCAATG
TGGGTAGAAGTTCTACCGGGGCTGCTAGACAGGGGTGTGTTACAATAAAg
attaaaagttcaaaattcaCGCATAAGGCGTAAACCTACATTGTACAAAA
gagtttatttttttaatcaaaaagtttttattgtcTAAATGTATTTCATA
GGAAAAATGATTTGTAATTAGTAATTGTGattagaatatttttatttgag
gcACATTGTAGCGTTTGATAATTTCTTGTCCTCGTATATTCAAAGACGcc
gacaaaaattggagtacaCTCTTTGCTTCTTTATATAAG
Run BLAST on NCBI

transcript from alignment at sc0000031:162179..176276-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00003789 ID=TCONS_00003789|Name=TCONS_00003789|organism=Clytia hemisphaerica|type=transcript|length=14098bp|location=Sequence derived from alignment at sc0000031:162179..176276- (Clytia hemisphaerica)
CTCAGATACACTTTCGACGTGTTCGATCGATGGAAATTTGAATGCTCCCT
GGGGCATACCGAATGAGAAAAAGTTGTATATATACAATATACCTACAACA
ATATAGGTTGAATTTAATCTTCTAGTGATGGGTTGTTAACATTTAATGTT
ATTTGTAGGTGTTATGGATATCAAAGGCATATTCTGGGGAAGAACCAGCA
GAGATATTTGCGAAACTCCGAGTGGTACTGTGACAGACTGTTACAACTCC
ACATTAGCTGTTTATCAACTGGAAAATGCAAAGACTTTTTGTAACAATGA
AACACAATGTAAATTAAAAGCATGTAAGTTATATCATGTAAGAGTCAGAA
AGAAATATCATTAAAAATTAGAGTGCTGAAGTGAGCCAACAATACACTCT
TCTCGAGATGCATAAATTTATTGTTTTCCTCGTTTTCAAACAGATTTCAT
TGCTATAAAATTACATATTCACAATGATAATTGTGTTGTTTACACCAAAC
ATTTTGAATTTCAAGTACTTTTGTTTAAGAGTTAATGTTTGTCTTTTGGG
AATTTAAATTGGTTTAAATATATAATTTCATAGCAATGAAATCTGTTTGA
AAACGAGGACAACAATAAATTTATGCATCTCGAGAAGAGTGTATTGAAAT
GCTATCTGTTATGCATCGTAGTGGTGGATCTGAGGAGTTTCAGAGGGAGC
ATGACTTAAAGAGACACTCGCCCTCATAAGCTTAGCATCCCCCTTCAGAT
CCGCTAGTATTGACTTCGATCCAAGTATTATATGCGAGTTGAAAAAAAAC
TAACCTAACTTAGAATTGGGAACCAAATTTAGAATTTTGTGAAAGCTTTG
TGCATAGAAGACATAGAAAATTCAATAATTTTGAAGGATATTTTCACTCT
TGTTTTTAGCATTCAATTTTGCGGATAAATGCAACAATATCATGTGGTTT
GATCCGTGTGATGGAAAATCGAAATATCTGGATTTGAATTATACCTGTAC
AGACACGAAAGGTATAAAGATTTATTTTACTGAATTGAACCGAAAATATT
ATTACTAGCCAGAACTCACAAGATGTACTAGAGAAGTCAAACAGACCTTC
AAATGCAATTTCAATTTCAATTTTGACTTTCCAATTCTCCTTATTGACAT
TTAGCCCAGCCCATTAACTGCAACATTTTCTTTGGTTTAAGTACCACTGT
CGAACAGAGACATATAAAACATGGAACCTAAATAGAGTTAAACAACTTTT
TTGTTTCAACGTCTAGCTAAAACGGATTACTATTCATCTTCACCATGGAG
CCAATGGAACGCATGGTCAGCCACCTGTGGAGCCGCTCAACGCTCAAGAG
AACGAGATTGTCAAAATCCACCTGAAAAACCATGTGGTTGTAAAAATCAA
GAATTAGGTGCTCAAAGAGATACTCCAGATGCTCGTTCAAATTCATGTCC
AGGTATTTACTTCTGAAAAAAAAAGCTCTGCAAGTCAATAGCACAAACTG
TTCAGGGTTTTCATTGTAGTTTATTGAAAAGATTTTGCTCATAAACATCT
TTAATTGTCATGATTGATGAAAGTTGAACTGGGTATGAATTGCATTCGAC
AAAACAACAACTGACTATTTACTGAATAATCTTATTTTTTTCACTTCCAG
AATCTACCTCAATTGTACCTGAAATGTCTTCATCGTCGTCGATATCACCG
TCCCCGTCCCCGTCACCATCACCATCCCCGTCACCATCACCATCCCCGTC
CCCGTCACCATCACCGTCACCGTCACCGTCACCGTCACCCTCCCCGTCAT
TATCACCCTCCCCGTCCCTGTCACCCTCCCCATCATCGTCGTCGTCACCA
TCACCCTCACCCTCTCCGATTCCTTCTCCATCTATGGTCGACTCTTCTTC
CTCCTCAATACAACCCTCATCTTCACCATCTTCAAAAAGCAGTAGCCACT
TTGAGTTATCCCCCTCGCGTGATATGATGTCTTCAACAACTTTTTATGAA
GCAACTGAAAGCTTAAATCCTTCAAGCTCAAGCCAAAGCGGTAATTTATA
TTATGATCTGAAAAAATAAAAGCTACATCTATTAAAAAGCCTACTTTACA
TTATTTGTCAGTTTTCGTTAACTTCCATCTAACGCCATCCGGACGTCTTG
AGCGTTAGGTGGACATTGAAGCAACGATATGCGATTAATAGTTAGAGTTT
ATGAAGCCATTGGTCTTAACTATAAACGTATAGTCCAGACATAATAATAT
ATACACTTAAACTACAATTTTTTTCTATTCAGCATATACACAATTGCTTT
CTCTTTCACCATCGCCGATGTCGTCCTCACCGATCCATGAAGCTTCATCA
TCGGCAATCGTTGTTGTTGTCCCTACCACTACTGGACTACCAAGCTTCTT
TGTCACTGCTTCTTTGACCTTAATATGGGAAGACTTTTGTAAACATTCAC
TAGAGTTTAGACAAGGTAATCTATGTATTGAGTGTTTAACAACGTGTTCA
AGTTGGATATCTTGAATTGAGATTCCAATAAAACTAAACAGCCGTACCAT
AGTATAAGAAAGCCGCGGCTTTCTTATACTATGGCCTATGGCCGTACATT
TGTTTTTGAAACACCTGATAGTTTATTTTTACATTAATTTCCAGTAAGCA
TTCTATCAACTCATTCAAGAAATACCTACTTTTGAACTTAATGCACCAGC
ATAGTTCAAATAGTTTTTTCAGAAGCTTAAATACTCATTGTCAATGATAG
ATACGGCCATGTTTTAAGTAGTTTTAAGTAAGGCCTCTAGTTAAAAACGA
TTACGTATAAGATTGCAACATTTTAAATTGTTTCAAATAACTTCTTTCTG
AAATGATATCTTTATACCCTGTTATAAATTCTGTAGGAGTTGCCGCCCTA
TTGACGAAGCGTTTGAACAAAAAACAATACGCAGATCAAGTCATCATCTT
TAACATTGACAACTGCAACAATACCAACAAAGACCAGAAAGCTGTCGTTA
AATTCTATATCGCTGTCAATAACAGCACAGCGACACCAAGTCAATCTTTA
ACAGTGTTGGCTGGTGAGTTATTGGCTGAACTCATTGAAGATGATGAAAC
TGTTGTCATTGGTCCAAATTTCGGAAAAGGAACTGTAAGATACTGTTACA
TTAATGTATTAACTTTTCTAATCGAAACAAGAAGCCAAAGTGGTATTAAG
TCAAAGCGACTAAGCGATGGTGAAATGTTTGTTCGCGATGCGTACACTTC
GTACCAGAAGGCGCTGTTCCTTTACAAAATAAACTTAAAGGGCTCTGACC
ATCGTCGGAAAATTGATTTTAGTATTTGAACATAAAAGTTATATTTTAGG
TTCTTTAACACTTTTAACAAAGAATTGCCTTTATAAATTGCTTTTTATTC
AAATCCCTTCAGATGAATTAAGAATTTAATTGCAGAAATGACGTTATGAA
CTTTAAAAAGACGTTAATAATATGTTGCATCACCTTATTTTATAAAAAGT
GCTAAGTTTTAATGGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNCAGGAATAGTTTGTCTAACAGAAAATGTATAACATGCCATAGT
TTTGTTGGTTACATCAGTCAGAAAACACATTTTAAACACGGCAATTATGA
AAAATTCACTGTGGTCAGAGCCCTTAAGTTAACAAAGCGTTTTTTCAAAA
ACGGTCATGCACCAATACGGCCAGCGAGATATGAATGAGAAGACTGATGT
TGGGCAAAAACCCAGCCTAATTTGAATGAAAATAGCATCAAGATGTTTGT
TTCACAAGTTTTCTTTCAATCAAGCGTCATAAACAACGAGAATGATTATT
CATAAAGGAACATTCAAGAAACAAAATTGTGGGTGAAGTCGTTGCTGATA
ACTTGAGACTGGCTACATGCGGTTTTATTTAGCATACTGGGAGCATACTT
TCATTTTAATATTAATATAGTGAAAATAGTTGAAGTGTAAATATTTGATT
CAAAAGGTTCATTTACAGTAGATTCTCGCTAATTCGAACTCGATCGGGGA
TGCAAATATTTTTTTCCGTAAGCGGCCCAAGCCCTGATTTAGCGGCCCAA
GACCTGAATTACCGGCCCAAGACCTGGGAAACTTTGCGACTTTCGAGACT
TGCTTTTTTGGAAAAAGAAGATAAACGAATCGTTATATTCCCATGGTACT
TCAATTTGATGATCTTCTAATGAATGTGTTCTACTAGTTTTTTAGAACTT
TTTAGGCAATTGATTCAGGTCTGGGGCCACTATAAATGGCAAAAAAGCAA
GTCTCAAAAGTTAAATCAGGGCTTGGGCTGCTTACGGAAAAGAATTTGCA
TCGAGGATTCTAATTTGTTCTCATTCGAGAGAAATTCGAATAAGCCAGAG
TTAACTGTATGATAAACTTTTCTGCTTTTAGTTCATCATAATCAAGGAAA
AGGATGACGACGATGATTTGTCAGCATGGTTGATCATCCTCATCATCATT
GCAGCCATCATCTTCTTGATCTGGTTGTGCTGTTGTTGTGCTATCGTAAG
TGATCAATCAATATCTTCATATTTTCTTCATGATATCACCAATAGTTTTC
GAATTATTTTAGTNTATTATCTTCATATTTTCTTCATAATATCACCAATA
GTTTTCGAAATATTTGAGTTTTGAATTATCCTCTTGATCTGGTTGTTCTG
TTGTTGTGCTATTGTAAAGTGGTCAATATCTTCATATTTTCTTCATAATG
TCACCATGAACATATAAACGACTAGACATCTATCTTTTATTGTCTCTTCG
AAACGAGCTTCGTAGCTGCCTTTATTTCAAAATTGGTATGAAAAATCCGA
CAATATTCCGTCATAATTTTATTTCTTTGAATTATTTAGGTAAAAGGATT
GATAGAGCTTGAACATTACTCCTAATGTACAAAAAAATTATTTTGGAATT
TTTTCACAAGTTTGTAACATATTTTATCAACATTTTCAACTCTAAAATTT
AGAATTTCAACTGCGTGTGTAATTTTGAATCCCTTTTGTCACTCCAATAA
TATTTTTTATGACTTGAAAAAAATAGCTTGCCAAAGTTTAGAGCCTGTGT
CATAAGAATATCAAAATTAGAATGCGACACTCTCTAAAATTATTANCGTG
TATACTTTTGAATCCCTTTTGTCACTCCAATAGTTTTTTTTATGATATGA
AAAAAATAGCTTGCCAAAGTTTAGAGCCTGTGTCATAAGAATATCAAAAT
TAGAATGCGACACTCTCTAAAATTATTAGACACTTTTAAGTCAAAATTTA
AAAATATTAGTCGGAGTTTTGACAAGCTGACGATGATTTTACCTTTGTTA
TCTTAGTTATGAAATAGATAAAAGACTTGAGAATAGTAGAACAACAGAGA
CTTTTGTCGAAGTTTTGACGTTGTTAGCAACACCCCTGTCTCAGTGCCCC
GGTGGCCTGATTTCAGTACATGATTTTTTTCAGTACATGGTTTCAGTACA
TGATTTTTTCCTACGTCACTGCAGTAATCNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGCTTGGG
AATTCAAGAACTGTTTTTTATTGTCGCTGTCTTTATTCAATTTATATCTC
AATTCACAAATGAGTGCAATAAAAATTTGATTACTGCAGTGAACGTAGGA
AAAAATCATGTACTGAAACCATGTACTGAAAAAAATCATGTACTGAAATC
AGGCCACCGGGGCACTGAGACAGGGGTGTTTAGCAAGGTACTCCCAAGTG
GTATATCATCAAAATCTATTGTTTCATTATATGCTTTTAACGAGGCGGCA
ACGAAGCTAGCAGCCCTTTCTACAAAAAGATAAAGGAGATCGATGTCCAG
TCGTTTATATGTTCATGATGTCACCAATAGTTTTCGAAATATTTGAGTTT
TGAACTATTTTCTTGATCTGGTTGTGCTGTTGTTGGGCTATTGTAAAGTG
ATCATTATGTTCATATTTTCTTCATAATATTACCAATAGTTTTCGAAATA
TTTGAGTTTTGAATTATTTTCTTGATCTGGTTGTTCTGTTGTTGGGCTAT
TGTAAAGTGATCATTATCTTCATATTTTCTTCATAATATTACAGATAGTT
TTTGAAATATTTGTAATATAATATTTGCGTTTTTAAATAATCTTTACTAT
CTGGTAATACTGATGCTGTGCTATCGTAACTGTTCATATTAAATTTATGG
TTTTGCCACATGATGGGATCATAGTCGTCAAAATACTTTGCAAAGTAGTG
CATAACACCACTACATCTTCTGGAACATTGCCGTATCACTTAATAAGAAA
AAACGCCTCCCTCAAATAAACGCCCCTTCTAATGATGCCTCCCCTCGGGG
CGTTTATTTGTCATTCGTTTATCCTTCATTTCGTCTCAATTTTACGACGC
TATCAATGTAGATTGTACGAAATCCTTCCAAAATATAGCAAACTTTATTA
GGGGAAGATGTTTGAGAATGTTAGTTTTCATGTGAGCTATTTTCATCCAT
CCATCCTCATAGACTAAACCAAAAAGAATTATCTTATAGTTTTGTAGGAA
AAGAAAGCGGGAAAAGAACCAACCACAACCACACCGTAAATATACATTCA
CACCTTTCAATGGATATGAAACACCACACGTTCAACTACGAGACAACACT
GAAATGGCATCCTTCTCAACAAACGTCATTAAATTAAATGTTAATGGAGA
TACGCCAAGTACACCAAAGTCTGAACGTTCACCCGATGGAATTGAGAATC
CTTCTTATGAGTTAGATGATGTTTCCAATGCACCTTCTACCTTCCAACCA
TTGAAAGTAACATTGGTAAATAAACTAATTTTTTCACCCTCCTTCTTTGA
CTTTCGGAGACTAAATTTATTGGGCATTATTACACAGGTTGCAAAATTAA
AGTCTGAAGATAAATGGGAAGCACGCCTTTATATGGGAAATTTTTATCTG
CTTGTTACATGACATTTATTTCTGATCTAACAAAGGCTTTAGAAAAAATT
TGCCTGAGTTTAAAATGCCTAATTTATGCTAAATGTTCATTAAATTACGG
TTTAAACAAAATATTTGACATAAAAGATAAATTTGTATTGGAAAAGTGTC
GATTTTTGTGACATCTTACTGTCAGAAATGCCATCATACTCAAGGTGTGA
AAATTTTAGGTGTCAATTTTTTTTTTATTTTGAAGCTAAATAAAAGTTAG
GAATTTACAGAACATTTCATGGCAAAAGCTTTTTTATTTCAAGAGCTATT
ACCAATAATTTGACCTCCGAACAGAAACAGCCCCCCCTAGGCCGAATAAG
AATAGATATTTACTTACTAATAATACAGTTGAGTCTCCATAACTCGAGCA
CACACGGAAAAAACACCTTTCGAGAATAGGAGTAAGGTTTATAAGGCATT
GTTAACACTGAAGGAAAGAGAAATCTTGTTCAAGGAGACATTTGGGTTAC
GAAGGTTCAAATTAAAGAGACTCCACTGTATCTGTGATTTCTTTATACAG
ATGAACCCATCAGATAGTGAAGACGAAGAAGATAACAAAAAGCCTTCAAC
CTCCTCATCTTCATCTTCAAGTGATTCAGGTAAGCTCATCTCTTCCCGAA
ATTTAAACCACAAACAATATAGTTCTCTAAAGGAATTATTTTGAAGGCTG
AAAGCGGTGTTTTTCCTGTTAGGTATAGCTTGAAAAACCTCACCAACTGA
TAATTTCAGTAAAAACTAACCTAAGTTATCCAAAAATCGAAGACTTCTAC
CCGAGAACACCATACATGTACAATTAATCCAAGATGTCTCACAAGTTATA
GCAAACATAAAACTTTATGACAGTAGAAGATCTAACAAGTTTCGATCAAT
AGCAAAATGAAGAAATCTGTGCATAAATGATATGAAAAGGAACAAATGCT
CTGGGGAAAATTAGAGACTGATTAAGAAAACACACTCTTTTTTTATAGAA
GATGAACCCAAAAAACAAGAAGATTTACCTCATCCACCAACACCTGTTAA
TGATAACCCTTACCAACCTCTAACATTACAACTAAATATCACAGATCCTC
AGACAGGGAATACACCAGGTGGAGGTCCTTCTCCTTATCAACCATTATCG
TTACAAATATCCCCAACTTCAGCACCAGTAACCAATAGCAATGATCCGGA
TAAGCCTCCAGATTATGAAGAAATGCTTCCAAAGGAACCAGAGGAAGATA
CAAAATCAATAAAATCAAACTCTTCTACCGATTCCGACAGCTCATCCTCC
TCCTCTTCGTCATCATCTGACAATCCTCTTAATGATTATGATAACCCTGA
CAGACCTCCCACACCACCACCTACTTCAACACTTCCTCCACGATCACCAG
GAGTCACCAGAGTTGTAAGTTGATATTCATTAATGGTCAAGATTATCTAC
TATATCTTGAAATCAACATCAATACACCAACATCTATAGAACCTATATTA
ACGTTATAATAATGCTATTACCAGCTTCGAAGCGTCTGATTTCTTTGTAT
GATCCTCTACGCTAGTATCCCTCTGATTTGTCTGTTATAAAGGATGCCAA
TCAAATTATTTGCTAAGTAAGATTTTTGAGCTGTGGATCGTGACGTCATT
ATAATTTGAGGAAGGAATAAAGAAGGTGTTCATGGTAGACATGGACATCA
ATTTGTATACATTCCTATTTAATTTCGGTTGTACTCAAAAGGGTAACGCC
ACAATCAACTTACTTAGCCAAGANATAGTTCTCTAAAGGAATTATTTTGA
AGGCTGAAAGCGGTGTTTTTCCTGTTAGGTATAGCTTGAAAAACCTCACC
AACTGATAATTTCAGCAAAAACTAACCTAAGTTATCCAAAAATCGAAGAC
TTCTACCCGAGAACACCATACATGTACAATTAATCCAAGATGTCTCACAA
GTTATAGCAAACATAAAACTTTATGACAGTAGAAGATCTAACAAGTTTCG
ATCAATAGCAAAATGAAGAAATCTGTGCATAAATGATATGAAAAGGAACA
AATGCTCTGGGGAAAATTAGAGACTGATTAAGAAAACACACTCTTTTTTT
ATAGAAGATGAACCCAAAAAACAAGAAGATTTACCTCATCCACCAACACC
TGTTAATGATAACCCTTACCAACCTCTAACATTACAACTAAATATCACAG
ATCCTCAGACAGGGAATACACCAGGTGGAGGTCCTTCTCCTTATCAACCA
TTATCGTTACAAATATCCCCAACTTCAGCACCAGTAACCAATAGCAATGA
TCCGGATAAGCCTCCAGATTATGAAGAAATGCTTCCAAAGGAACCAGAGG
AAGATACAAAATCAATAAAATCAAACTCTTCTACCGATTCCGACAGCTCA
TCCTCCTCCTCTTCGTCATCATCTGACAATCCTCTTAATGATTATGATAA
CCCTGACAGACCTCCCACACCACCACCTACTTCAACACTTCCTCCACGAT
CACCAGGAGTCACCAGAGTTGTAAGTTGATATTCATTAATGGTCAAGATT
ATCTACTATATCTTGAAATCAACATCAATGCACCAACATCTATAGAACCT
ATATTAACGTTATAATAATGCTATTACCAGCTTCGAAGCGTCTGATTTGT
TTGTATGATCCTCTACGCTAGTATCCCTCTGATTTGTCTGTTATAAAGGA
TGCCAATCGAATTATTTGCTAAATAAGATTTTTGAGCTGTGGATCGTGAC
GTCATTATAATTTGAGGAAGGAATAAAGAAGTTGTTTATGGTAGACATGG
ACATCAATTTGTATACATTCCTATTTAATTTCGGTTGTACTCAAAAGGGT
AACGCCACAATCAACTTACTTAGCCAAGAAATACCAATGTCTTTTGAGTC
TGACAAGCACCCCTTTTTATAAAAACATAGGAATATACCTAGTAGTTGGA
CAGAAATTCTTATTTCTTTACATATATGTGAATGTATTATGCATGGTAGA
GAATCTCTCCCCAAATTGCTTTTTAGTTTATTGGTGGCAAATTGGTACGT
GAAATTGGTCAAGGTGATCCAAACAAAGCAATCCATGTTAAGATGACGAC
GACCATGTAATACACGAGTGAATGATGGCGGAGAAGTCAAACGTCCTAAA
GAAGAACTGTATTTTTAATAGGATTCAAATGGTTTTGATAGCGAAATTGC
TTATTGATCTGGTAGGATAATGATCTGTTATAAACACCTCCTTCTCACAG
ACCCGGTAGGATTTTTTTCAGCCAATGGGGGTAAAAATAACAGACTGAAA
CTCGCTAGGAATCGATATTCCCACATTTTTTATGGATGGGGGGTCAAAAA
GTTCAGTGGGGGTGAGAAGAATAGGATAATATTTTGCAGTGAAGATTGGG
TTTATTTGATTTGATTATTTCCAGTGGGGAGGACTAAACTAACTAAATAA
TGACAATGATGTTTTAATGATAGTCTTTAAAGGTTAAAACACCCCTGTGT
TACAGAACCGCTGGAAAATTGGCCAAAATTGTGTCCCCGGTGGAAAGAAT
ACTTCCAGCCCCACTGGATACTTAACTTTGATTTCATCCCATTTATTAAA
ATTCAATAGGAAAAACCATCTTCTTTTTTTACCTAAGAACAATAGCTTAA
GAGGTAGTCCTCGGGCTAAACTCTACTCAGTGCCGTAGACACAAATTATA
TTTAGGGGGGCCCTATATTTAGTATATAAGGAGGTTCCCCCATGGTTGGG
GCCGACGGGCCAGGAAAACTTTTGGACTTTATACCCTCCAGATTAGCTAA
AAATGCCTCTCCGAAAGTCAATTTTCAGCAAAAGGCAAGTAGAAATCGCG
TGCATATTAGTATATTTTCAAAGAGTCATTCATAAAACTATCTTTTTTGA
TGGTTACTGCGTTAGTTATTTATTTATTTTGTTCTGTGGCATGCGTCTGC
TCAACGTAAAAGTGGTAAAAAGAGTGAAGAGATTAAGCAAATAAATCAAA
TAAGTAAATATAAAGACAACGGTGACGAAATTTACACCTTAACAAAAAAA
CACCATAATCTGAAAATCTTTTAGGGGGGGCCAGGCCCCCCACCCCCCAG
TGGCTACAGCACTGCTACTTCAAGAAAATTTCAAGAAGAACCAAACCCAA
AACATAGAAGAAATTGCAAACATGAGCGGTTAGAGGCCATTTGTCTAACT
GTATAAATTAGATTATTTCGTAGAGGTCAATAGACCTGTGAAATACACAT
CTATAAATTAATAGGGTTTCTATCCAAATTATAATTTCGATAGAATTATC
ATCCCAATGTGGGTAGAAGTTCTACCGGGGCTGCTAGACAGGGGTGTGTT
ACAATAAAGATTAAAAGTTCAAAATTCACGCATAAGGCGTAAACCTACAT
TGTACAAAAGAGTTTATTTTTTTAATCAAAAAGTTTTTATTGTCTAAATG
TATTTCATAGGAAAAATGATTTGTAATTAGTAATTGTGATTAGAATATTT
TTATTTGAGGCACATTGTAGCGTTTGATAATTTCTTGTCCTCGTATATTC
AAAGACGCCGACAAAAATTGGAGTACACTCTTTGCTTCTTTATATAAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_002109XLOC_002109Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00003789-exon-sc0000031-1575043694:175954..176276TCONS_00003789-exon-sc0000031-1575043694:175954..176276Clytia hemisphaericaexon
TCONS_00003789-exon-sc0000031-1575043694:175266..175367TCONS_00003789-exon-sc0000031-1575043694:175266..175367Clytia hemisphaericaexon
TCONS_00003789-exon-sc0000031-1575043694:174825..175010TCONS_00003789-exon-sc0000031-1575043694:174825..175010Clytia hemisphaericaexon
TCONS_00003789-exon-sc0000031-1575043694:174237..174626TCONS_00003789-exon-sc0000031-1575043694:174237..174626Clytia hemisphaericaexon
TCONS_00003789-exon-sc0000031-1575043694:173812..173994TCONS_00003789-exon-sc0000031-1575043694:173812..173994Clytia hemisphaericaexon
TCONS_00003789-exon-sc0000031-1575043694:173143..173390TCONS_00003789-exon-sc0000031-1575043694:173143..173390Clytia hemisphaericaexon
TCONS_00003789-exon-sc0000031-1575043694:169332..169445TCONS_00003789-exon-sc0000031-1575043694:169332..169445Clytia hemisphaericaexon
TCONS_00003789-exon-sc0000031-1575043694:166912..167187TCONS_00003789-exon-sc0000031-1575043694:166912..167187Clytia hemisphaericaexon
TCONS_00003789-exon-sc0000031-1575043694:166148..166226TCONS_00003789-exon-sc0000031-1575043694:166148..166226Clytia hemisphaericaexon
TCONS_00003789-exon-sc0000031-1575043694:165363..165778TCONS_00003789-exon-sc0000031-1575043694:165363..165778Clytia hemisphaericaexon
TCONS_00003789-exon-sc0000031-1575043694:162179..163750TCONS_00003789-exon-sc0000031-1575043694:162179..163750Clytia hemisphaericaexon
TCONS_00003789-exon-sc0000031-1510915933:175954..176276TCONS_00003789-exon-sc0000031-1510915933:175954..176276Clytia hemisphaericaexon
TCONS_00003789-exon-sc0000031-1510915933:175266..175367TCONS_00003789-exon-sc0000031-1510915933:175266..175367Clytia hemisphaericaexon
TCONS_00003789-exon-sc0000031-1510915933:174825..175010TCONS_00003789-exon-sc0000031-1510915933:174825..175010Clytia hemisphaericaexon
TCONS_00003789-exon-sc0000031-1510915933:174237..174626TCONS_00003789-exon-sc0000031-1510915933:174237..174626Clytia hemisphaericaexon
TCONS_00003789-exon-sc0000031-1510915933:173812..173994TCONS_00003789-exon-sc0000031-1510915933:173812..173994Clytia hemisphaericaexon
TCONS_00003789-exon-sc0000031-1510915933:173143..173390TCONS_00003789-exon-sc0000031-1510915933:173143..173390Clytia hemisphaericaexon
TCONS_00003789-exon-sc0000031-1510915933:169332..169445TCONS_00003789-exon-sc0000031-1510915933:169332..169445Clytia hemisphaericaexon
TCONS_00003789-exon-sc0000031-1510915933:166912..167187TCONS_00003789-exon-sc0000031-1510915933:166912..167187Clytia hemisphaericaexon
TCONS_00003789-exon-sc0000031-1510915933:166148..166226TCONS_00003789-exon-sc0000031-1510915933:166148..166226Clytia hemisphaericaexon
TCONS_00003789-exon-sc0000031-1510915933:165363..165778TCONS_00003789-exon-sc0000031-1510915933:165363..165778Clytia hemisphaericaexon
TCONS_00003789-exon-sc0000031-1510915933:162179..163750TCONS_00003789-exon-sc0000031-1510915933:162179..163750Clytia hemisphaericaexon
TCONS_00003789-exon-sc0000031-1491911889:175954..176276TCONS_00003789-exon-sc0000031-1491911889:175954..176276Clytia hemisphaericaexon
TCONS_00003789-exon-sc0000031-1491911889:175266..175367TCONS_00003789-exon-sc0000031-1491911889:175266..175367Clytia hemisphaericaexon
TCONS_00003789-exon-sc0000031-1491911889:174825..175010TCONS_00003789-exon-sc0000031-1491911889:174825..175010Clytia hemisphaericaexon
TCONS_00003789-exon-sc0000031-1491911889:174237..174626TCONS_00003789-exon-sc0000031-1491911889:174237..174626Clytia hemisphaericaexon
TCONS_00003789-exon-sc0000031-1491911889:173812..173994TCONS_00003789-exon-sc0000031-1491911889:173812..173994Clytia hemisphaericaexon
TCONS_00003789-exon-sc0000031-1491911889:173143..173390TCONS_00003789-exon-sc0000031-1491911889:173143..173390Clytia hemisphaericaexon
TCONS_00003789-exon-sc0000031-1491911889:169332..169445TCONS_00003789-exon-sc0000031-1491911889:169332..169445Clytia hemisphaericaexon
TCONS_00003789-exon-sc0000031-1491911889:166912..167187TCONS_00003789-exon-sc0000031-1491911889:166912..167187Clytia hemisphaericaexon
TCONS_00003789-exon-sc0000031-1491911889:166148..166226TCONS_00003789-exon-sc0000031-1491911889:166148..166226Clytia hemisphaericaexon
TCONS_00003789-exon-sc0000031-1491911889:165363..165778TCONS_00003789-exon-sc0000031-1491911889:165363..165778Clytia hemisphaericaexon
TCONS_00003789-exon-sc0000031-1491911889:162179..163750TCONS_00003789-exon-sc0000031-1491911889:162179..163750Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000031supercontigsc0000031:162179..176276 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
1.30129	1.53637	0.616736	0.480623	2.47019	1.98794	2.17112	2.30859	1.34046	2.28902	2.24442	1.34794	7.57537	7.01143	2.55844	2.9591	3.13372	3.89615	14.8954	15.936	3.59063	5.03073	1.96205	2.65707	7.62767	7.1543	1.15348	1.2052	2.25214	1.82045
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00003789 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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