TCONS_00003764 (transcript) - C. hemisphaerica

Overview


Name	TCONS_00003764
Unique Name	TCONS_00003764
Type	transcript
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	2201

Sequence

The following sequences are available for this feature:

transcript sequence
transcript from alignment at sc0000031:810605..819980+

transcript sequence

>TCONS_00003764 ID=TCONS_00003764|Name=TCONS_00003764|organism=Clytia hemisphaerica|type=transcript|length=2201bp
ACCGTTTGTTACTACGGTTGGGTTTGATTGTGATGGACATTGTAAAAGAT
GGGTCGAACTTTTGGTCCTTTTTCGTCTTTACATGTgatgccaaaattaa
aattgaaacCGATAAGAGAGCATACACCACCTTCACCTAAATCAACAGCG
CCAACCCCGCCCAGTCGACCACGTGATATTCCGCCCGTTATCCGCCATGA
CTTTACACACAAAAGCACGAGTGAAATGGAGCCGTTTGAAACTTCCCATA
TCGCATCAATAGACAATGCCGTTCATTATGATGAATTACAAAAAGCAAAA
GAAGCATCGGGAAGTAAAAACAATATCATTAAGCATCCACTAAACGATCA
CAGAGGTCGAAGATTGTGTTGCTCAGCCGAAAATTCACCCATATTGAGTC
GTAGCATGATTTCAAGGCAGAATATACCTTCACCGAGGGAACAAAGAACA
AACTCGATCACACCACGATTGGTTCTACAAAATATAGATAAATTTGACGT
CACTGTTCAATGTCCTGATGGTAATTTATTCAAAGCCGGTGTTTTCAAAG
CCTGGACGTCATTTCAGCTAGCCTGGAAAATTGCACACGTGAGAGGAATG
GCGGAGAAAATTGCACTAATAATTGAAGAACATATAAGTGACTTACATAT
AAAACGCTTAATTGAGGACCACGAGATCATTCATAAAGTGACTACAAACT
GGGCACCAGACTCGAACAATATTCTTGTAATGAGTGAACGTATTTCCAAA
TATGACCTCTTCAATGAACCCGCTGATTACCTTCCGATTGAGATGTTCGA
CACACGATCTGATTTCATTGAACAACCTAAGAATGTTCGCAGAAGCTCCT
TGCTTAGGTCAATCATGACAGCTGATCAAACACCTGATCTCCAAGGCTGG
GTTTTCGTAAAAGCCTTCGATAAACAAAAATGGAAGAAACGTTTCCTCCG
AATCAAGGATAAGATTGTGTATACTTGTGAAACAGACGATGAAAACTCAG
AGATAAAGGCAATCTACCGATGTGACGAATGTTATTTTTATGATTGTCTG
GCTGAATTTCAAGTGGCTCACAAAACTCCCTATCCTCACTGTTTCTGTAT
TATTCCTAAAGTGGTGACTTCTTGGCATGAAATCAAATGTTTTTGCACGA
CTTCAGAACGTCATCTGATTGGCTGGATGTCTGGATTCAGATTCGCTAAA
TATGGTCAGCAACTGTACACGAACTTTCGAGAGGCGATGGTAAAGGAAGC
CAACTTGAGGCGGACAAACAGTGCTCGTGTCAGCCTTTTGTTCAGGAGAT
CATTTGGCGATAATAACAATACCAAAGATAACAAAGCAACGGTCGACTTC
TCTGGACAAAACGGACGAGTTATTTCGGACCCAATGGAAGCATTAAAAAT
ACAATCAGAAATGGCTTTTGAAATTCCTAAGCAAACAAAAAGAAGTAGTG
GGACTTTCCCTCCATCCAGTATCCGACAAAACGTTCTTGACAAGAAGATT
TGGTATCATGGAAAATTAGATCGTGAGCAGGctactaaaaaactgaaaaa
acatGGCTCTAAAGAAGGTTTATTTTTGGTTCGTGAAAGCAACTCAACAC
ATGGTAACCTCGTTCTGACGGTGATTACAAAAAAAGGGCGTGTCTCCCAT
CATCAAATATTCAAGaacAAGAATTTATACGGTATCGAACATGGCCCACA
ATTCAATTCTTTGGAACTTTTAATCGAAGCTTACCATAGTGGAGCTGTCG
AGGGCGCTGActtcagtttgaaaaaagcttGCCCTATATAATGAAAATTT
ATCGGGAAAAGTCATTGCAGgttgaccaaattttccagCTGATAacttaa
aatgttttatttgcAAGAAGTTGTAGatagatttcaaaatttgaattatt
ctgtgacaaaaaaatatgaactgtataaatttatattttgaagatggagt
taaaaattaatttgtatTTAAGAGAAATTATATGTTGGTTTACTGTACTA
AACAGAGTTTTGTAGTCTATTTATATATGTCTAAAAAAGAAATctaattt
tataaaattatgtaaaagtatgatgaaaatgattattttaattatttata
aaaatgaACCCTGAACCCAGTTTTGCTTCAGCTCCCCCGTATTTACCCTT
TGGACAACAGGGTACGATCTATTGAGCTCGTATTTAGCCAAATATAACTC
T

Run BLAST on NCBI

transcript from alignment at sc0000031:810605..819980+

Legend: exon

Hold the cursor over a type above to highlight its positions in the sequence below.

>TCONS_00003764 ID=TCONS_00003764|Name=TCONS_00003764|organism=Clytia hemisphaerica|type=transcript|length=9376bp|location=Sequence derived from alignment at sc0000031:810605..819980+ (Clytia hemisphaerica)
ACCGTTTGTTACTACGGTTGGGTTTGATTGTGATGGACATTGTAAAAGAT
GGGTCGAACTTTTGGTCCTTTTTCGTCTTTACATGTgatgccaaaattaa
aattgagtAAGGGCCATTTCTTaatcaattttatatttttcggTGGACGT
GGTTATGGATTTATCTTGCTTGCATTAACTCGCCTTATAATCagaaaata
tgtgaataattaCATAGAACTTGAGAATAATTAAATTGTACTTATGTGAC
GAAGCATGTAGCGTAAAACCCCCATGGCTGTTTATTTGGAGGAAACGTCA
TTCCTCGTCTTAACTTGTTTGAACTTGATCTATGacttttcttctttcaa
atcTTCCTGTTATgttggagtctccataactcgaacacacaaatttgctc
aagtttaggaaatttcgagttatagagacgtGTTTACTGAAGGGGCCAGA
GAACTTGTTCCAGTTAATGAAACATTCGATTTATAGAGACCCTCCTACAC
TGCTAATTAAAGGTAGGTGGATTTAAGAATCGAGGATCAAAGAAAACATC
TCCtaaatttttatctttcagaacCGATAAGAGAGCATACACCACCTTCA
CCTAAATCAACAGCGCCAACCCCGCCCAGTCGACCACGTGATATTCCGCC
CGTTATCCGCCATGACTTTACACACAAAAGCACGAGTGAAATGGAGCCGT
TTGAAACTTCCCATATCGCATCAATAGACAATGCCGTTCATTATGATGAA
TTACAAAAAGCAAAAGAAGCATCGGGAAGTAAAAACAATATCATTAAGCA
TCCACTAAACGATCACAGAGGTCGAAGATTGTGTTGCTCAGCCGAAAATT
CACCCATATTGAGTCGTAGCATGATTTCAAGGCAGAATATACCTTCACCG
AGGGAACAAAGAACAAACTCGATCACACCACGATTGGTTCTACAAAATAT
AGATAAAGTAAGATAGAATACTGATTCTTGTTTACATTATCGGGCCTTCC
TACACCGGCCAGTCAtctacctaaaaataaagtgCACGAATCCGTTGTCG
AATGCCAGCAGCAGGCCGATGATGTCAAACAAGGCACCAGGCTGCACCTT
CATTTATCTGATTTGACTGTTTTTCTCCCCCTGTAAATTTTTATTATCAC
TTGATTTATCCTTCACATAACTAACTCGATCTAAACAAGTACAAAATTAA
TAAGCCTTCTTACTGTCTTGATTGAAATAGGCCATTTTGTACAGAAGGGC
AATCAATTTTTTCATACGACAAAAGTCCAACTGGACCagtgcgttcttca
ttatcgaacctcgTGTATCTTGctttcctacatgataaccatgttgacat
tgagcttagtgtggacgcaATATGCAAGATTTTCCATTTACCAAGAATTC
AAGGCACTCATCTTGAGATTAATCGGACTCTGTTTAGACCTTaagtactc
tgtaccagagtgtatctcacgtttgtCGTTTCGTATTAACTCGTGTCTGT
AATTGCATTGCATTGgaaacctctgcgatgaagtatgatttataaattgc
aatacttctctcgtcgtctcccctctctcacctgCACTCCGTCGCAGCgg
tcagtttgaaaaatcgcaAATCAGAAGAGACAATgtcaacagaccctcta
cggcaatgaattttaatataagccgtagatatcgggtgtACAGACTAAAC
CTTCAGTCATGTGAAATTACTCGAAATATTCTTCTGAATTTGATTCCCTC
TCACTCTTTTAGTTTGACGTCACTGTTCAATGTCCTGATGGTAATTTATT
CAAAGCCGGTGTTTTCAAAGCCTGGACGTCATTTCAGCTAGCCTGGAAAA
TTGCACACGTGAGAGGAATGGCGGAGAAAATTGCACTAATAATTGAAGAA
CATATAAGTGACTTACATATAAGTACGATACTCATGTTATGCACCTTTGC
AATGTTTTCTGACATTACACCACGGACTCAACagttgattggttgtaagt
ggtGTTTAAAtccagtcaatacgtcacttgcaaccaatcagctgtttgaT
ATAGGTTCCATGATGTGATGAAAAAAGACGTTGAAACGATGCATACCATT
TATATTtgcttttcatcaaattttttttcaatggttTGCTCAAAGCCTAA
AATctgtttcaaaaaattgacaGTCTGCATATTTTCATACATTGAAGGAT
AAAGGataaaagtaatacctcgttggaAAGATTATCTTAAGTGGATTGTG
TTaaggctttaaaattttgaaaatgaagatggaaaATGAAGCAGAACAAA
CGAATTTTTGACTACTAGGACAAAAAAGACTctcgaattttcttttttta
tactttACAGAACGCTTAATTGAGGACCACGAGATCATTCATAAAGTGAC
TACAAACTGGGCACCAGACTCGAACAATATTCTTGTAATGAGTGAACGTA
TTTCCAAATATGACCTCTTCAATGAACCCGCTGTAAGTGAATGTTGATCA
CTTTGATCAactaaaatctaaatcaaaatGGATTCCTGAGGATTGAATTC
TCGCTCCTTTCGCTGTCGAGACGGCCGGCCTTGGTCCCCGtgaaaacaat
agagagactgAAAAGTCTTTGATTCTGGTCTTTCtctctgtctgtcacaa
aaacctTAGggtagcctggagacttcaaaaatggtcggatttgacttttt
tttttaggttCCATTTATTTAGGGCCCTGGGACGAATTTCTGGGGAAAAA
CTTAAATTTAGTCCAGAACAGTACAgtgcacgttcgactattataTTATG
TAGTGCTTTCAGTAATTTCAGAAACTAATACTCCGATTTCAGGATTACCT
TCCGATTGAGATGTTCGACACACGATCTGATTTCATTGAACAACCTAAGA
ATGTTCGCAGAAGCTCCTTGCTTAGGGTGAGTTTATTTGTTGCCTTTCCT
atcattaccgagtttatgtatcggaggatatcgagggcgacggtaagtga
aatcgatacaaaacaaagtcgatagtcgATGtgcggctctatatcgcctt
tgctcacctaaacagacgacggtattttggtgtttttaccgtcgtcgagc
aaagtggacggtgattttggggacatgtcaactttgctttataccgtccc
cctcgatttatctggaatacataaactcgctaatgttgTTGGGAAAGAAA
TATTGCTTGGCCGGTCCTTAGCTCACCCCGACAACATTGTTTGGTGGGAA
GAGGGGGATGCTCATTTTTGCGCTTTGTACACATAGGTTTTGTCAATGGT
TGTACCTGTGCTTTGTTGACCTCATATTGTATGTATACTTTCAAGCAATA
TCAATTGTCTTTCAACTACACAATAAATTTTAGATCTATCATTTAGACCC
CTTAAACCCTTAATCTCGGATGAGATTTAAGTCGAGTTAAAAGACAAACC
AGCACTTTGAAATCCATTTATTCCAAgtcttaaaattttttaatcctTTT
ACAGTCATTCATGCTGTTACGGACTAAGgtttataattttataatcttat
tcatgatatgcaacactaGAGAGTCTTccaagaatttttaaaatgttcaa
cccaatacgtcacttaatttaaacaatagaaaaagtgacataTTGgattg
aacttttcaaaaattcttggaagactctccagtgttgcatatcatgaata
aggcATTGTACTGAAGAGAcgataaaacttgttcgagttaaggagacatt
cgaattaaAAAGGTTCGAATTAAAGGGAATCCCCTTACTTTCACGTGCTT
GATAAAAACAACACCCGATATCAGCCCAGCtgtcacacaacgttgtttca
acgttcatctaacgttatatggacgttgtgaatattagaaaaacgttgaa
tgGACTAAGAAGACTTTGCTTCACAAATACGTTTTTTCATTCATAGTCAA
TCATGACAGCTGATCAAACACCTGATCTCCAAGGCTGGGTTTTCGTAAAA
GCCTTCGATAAACAAAAATGGAAGAAACGTTTCCTCCGAATCAAGGATAA
GATTGTGTATACTTGTGAAACAGACGATGAAAACGTAAGTTTTGTCTTTT
TACTCAATTCTGGCTGATTGCTGGGAATTGATAAAGAAACACAAAGTTGA
TTCAAATACctatatactttttttataagaacatttaggctcaaaaatgc
ataaaaataaTAGCAATTTGAGAAAGAACTGAGCTTTTTCAGGCTAAAGG
TAGTAATAAATTGGGTATACAGAATGaaatatcttaatttttttttaacg
aCAGGGATATGACCATTTAAGGCTCAAATGAggtttattttccttttttg
gtGAAAATATGTAAAACTTTGCTCGACtctcattgttcttatttttctta
tttttttgttctctgagtctgaaattgttcttatcgtgTTCTTATTCTAG
AAAAAACTCAAGACATTAAAATTTAATGCTCTAACATTTTACTAAATTCA
GCCCtcgataaaaatttaaaattaactAATTCATTTCCTTCTGCAATCCG
AACTCGAACTTTTGTtcagattcgaattatagagaatCGAATTTAATTTC
TAATTACCTATTTCTCATTATAGTCAGAGATAAAGGCAATCTACCGATGT
GACGAATGTTATTTTTATGATTGTCTGGCTGAATTTCAAGTGGCTCACAA
AACTCCCTATCCTCACTGTTTCTGTATTATTGTAAGTAATTTTTCGtcgc
tttataagaacaaattatataagttGGTggtcaaaatatcaagaacaagt
taagaacattttaaggctttgcgcgggtttttcttatttcaatttcttag
aaaaattctgcaaaatgaCTCTTTTTAAAATGGTATAATAAGAACATCTT
GCGAACATCTTTTAATCTtagaactcaaaaagttgaACATGCGACAgctt
agaaaattttgaatgtttttgtaaaaatttacgGAATTTACTAGATTTCT
GTTCGGATGCTTTGTTCGAGCATTAATTAATATCTGTACATGTTGTTTAT
GTATTCTTTTTTATAtgagaataattttataagaacaatgtgaCTCAAAA
ATACTACAGATATGAACAAATCAAGATGAGCCTAGAATAGCtgaatttta
aacaaaataagGGTCTAATTAACCTAATATATCTCAATTTTGCCCTAGAA
ATAAGAGCTAGATGAGAGCAATTTTATGTTGAAAGTGCCctgaaaattaa
gaacagccgagcctcatcaaaatttaaatgtTTGTTCTATGAAAAAGTGT
AATGGTTAACAACAAATTCTCTTTCTCTTTCAGCCTAAAGTGGTGACTTC
TTGGCATGAAATCAAATGTTTTTGCACGACTTCAGAACGTCATCTGATTG
GCTGGATGTCTGGATTCAGATTCGCTAAAGTAAATTCACAGTTATGTTTA
TACTTTTTAAAGGTCCCTCAAAATAACTTCTTTCTAAGGTACCGTTAATA
TAAACAATACTTATGAAATTGCTGGTTTACAAGCTTAAAAATTATCCATG
CATTTAATCTCAGTGTTTTCAGAACACTTGTCTCTGATTGGATAATATCC
TGGAATTGCTTTCCTCGACTCTCGTACCCACTCCACTTAGAAAGATATCA
CAATATCGCGAATCCCTattgaatttttaaacttttaactaATCTACACC
CATTAAAATCGGTAAtttcactctctctaattcgatcctcaagggaccaa
gaattttcCCTCGATTTAGAGANAtttcactctctctaattcgaccctca
agggaccaagaattttcCCTCGATTTAGAGAAAAAATTCGAATCACAGAG
AGTATTTTTCACGACTGTCCAGCTGAGGGGACTAAAGTTTTTATTTCGAA
TcataaaaagaaagatttgagtAATACTGTAGAGCTTCGAATTAGAAGGA
AGCGTCTGATTTTTATCGATTATATTTTAGTATGGTCAGCAACTGTACAC
GAACTTTCGAGAGGCGATGGTAAAGGAAGCCAACTTGAGGCGGACAAACA
GTGCTCGTGTCAGCCTTTTGTTCAGGGTGAGTCAGCAATTGAATTTTTAA
GCCCGAAAGATCTTTTCGTCCGTAGCTGTCAATTGCAGCGCGGGCATTTT
CTGTCCGTTTTACCatccagtctttttttcgcacatAAAGACatagaaaa
agtgtaaaaaaagggtTGGATCGAGtctagggtggtaaattaaataataa
agtgactgcgcgactacggttgaaaaggttTATTGAGACGAATCTACcct
aagcaagaaaaagtgaaatctTAAAACTTGCATCGTATTTAGGATTACGG
ATTGAATGTAGGACTTTCTTTTTGGtcgcgttttacgtttttttcaatat
ttggcAGTAAATGTTACTTCCAATCCAGAATTTGTATGAAAACCACGTTG
GTCACGAAACTTATGTAAGAAGTAAATCGCTTCAAATCCTACATATCTTT
CGGCTATACCTTATTGGGTTCAATagttgaatttcaaaacattttaaagc
tttttcacTTCTCCAACTGTCATGGAAATGTTAGTGCATTGGATACCTTC
AGCTAgaatttaattcttataaatatTTACTTTCCAGAGATCATTTGGCG
ATAATAACAATACCAAAGATAACAAAGCAACGGTCGACTTCTCTGGACAA
AACGGACGAGTTATTTCGGACCCAATGGAAGCATTAAAAATACAATCAGA
AATGGCTTTTGAAATTCCTAAGCAAACAAAAAGAAGTAGTGGGACTTTCC
CTCCATCCAGTATCCGACAAAACGTTCTTGACAAGAAGATTTGGTATCAT
GGAAAATTAGATCGTGAGCAGGctactaaaaaactgaaaaaacatGGCTC
TAAAGAAGGGTAAGAAGGCCGTCTGTTTgttcagctggcacacaacgttg
tttcaatgtttatctaatgttcaaaACGTCCATATTACGTTAAattaacg
ttgaaataacgttgcgtgccagctggCCTCGAATTCGTCCTAATCCCAGT
CTTTACTTGCTCTCGATCCAAGAAGGCCGTCTGTTTGATTGAATTTAACC
TAAATCTTTCCCTTCCCATACGCGTTATATACACGGATGTCGCGGACGTT
GTACAACTAATTAGATGCTCGGGaatctttgaatttttcaaaagggaaaa
tatttcctttgttccCTTGTTACAGATCAATAAAAATCAATTAATATTAT
ACTGGTCAAATTGACAATATCGAACGATATAGCAACTGAAAATACTGTTT
TCACCTATATATCTTTTGGTCAATGTCTTAAGAAAACTGAATGTGGATTA
CCTTATATACTCTTTATTCATTGTAGTTTATTTTTGGTTCGTGAAAGCAA
CTCAACACATGGTAACCTCGTTCTGACGGTGATTACAAAAAAAGGGCGTG
TCTCCCATCATCAAATATTCAAGGTAACTTTCTTTAAGTATAATTTATGT
CAAAATCATGCGTTTTGTCTGACAACGTTCTCAATCgcccttttcataaa
ttatgcaacaactgcctcgttttgaaaccattaccaagatTATCAAATCC
CTAGAGCTTTCAAATGCtacttttacaaatagaattatCTTCTTGATAAA
GTCCTTTGGGAATCAATTatcatagcaatattttgaaaacgagtaAGCGT
TGCTCgagacgtaatttatgaaaaggtctctCAAGAAAATATGCAGGGTG
TCAGGGAAAAAAGTGTCGAATTtgaaccacagatatctgtaaagcccgaa
gggctagataggcaactttaagctttctttagcaaaaaaaagtgaatatt
ggaaaaaatattgttgctattgttttccgaaacccgcgaagcttctgatt
ggtcaatcgctgaaattctattgtaatgtcacgttactttggtaggaaat
ccttccaaagatgagcttcactttttgaccaaggccgctaatctagccct
tcgggctataCTATATCATTgattcgaacatgattctgagtagaaggttg
ttgcgcGTGTTTAACAAAAATGTGAGAAAATACATACCAACACAAttatt
gtttttacaacagtcattgtgattgaaaagaattaactttctttacaatt
ttcatgacgttaaagttattgagaattgttttttgtaaaactaCTGTTAT
TCATTaaagatgtctcatgacaattaatatgacatagaaaaaatttaata
aacattGCAAAGTTAGTGAAATACGCACAAGAACTCTTTtttttctatag
aagtggtacgacccGATACTTTTTtgcgggacaccctgtataaacatttt
tgccaatttttggatttttaattGCTTTAGGATTCCTTCCTACTCTAATG
TCCCAAGTAAtaggggggtctgaataaaaaGGGGGGGAgtccgaaatttt
tgcaaaatataataaacgggagggtctgaataaacgggggggtctgaAAA
TCATCATCATTTGACACGTATTTGATCTAATTTGCAGTACTCTAAGGTCG
TTAGAAATAGATTAAGCCTGATTTACANGGGGGGGGGGTCTGAAAATATT
TAGAAGTTTCCTTTTACCTAAGTACTTCTATGAATTTTCAAGGGGCAAAT
TAAGGGTaataaaatggaaaaacacttcaactcaaaaacaaaaaactaga
aaattaataaacgggggggtcctaataagaacgggggggtccgaaaattt
ttcgaaaattaataagcgggtggggacgtctattcggGAGAAAAGctaga
gaatttcttttgaataaacctttctttattttattttcagaacAAGAATT
TATACGGTATCGAACATGGCCCACAATTCAATTCTTTGGAACTTTTAATC
GAAGCTTACCATAGTGGAGCTGTCGAGGGCGCTGActtcagtttgaaaaa
agcttGCCCTATATAATGAAAATTTATCGGGAAAAGTCATTGCAGgttga
ccaaattttccagCTGATAacttaaaatgttttatttgcAAGAAGTTGTA
Gatagatttcaaaatttgaattattctgtgacaaaaaaatatgaactgta
taaatttatattttgaagatggagttaaaaattaatttgtatTTAAGAGA
AATTATATGTTGGTTTACTGTACTAAACAGAGTTTTGTAGTCTATTTATA
TATGTCTAAAAAAGAAATctaattttataaaattatgtaaaagtatgatg
aaaatgattattttaattatttataaaaatgaACCCTGAACCCAGTTTTG
CTTCAGCTCCCCCGTATTTACCCTTTGGACAACAGGGTACGATCTATTGA
GCTCGTATTTAGCCAAATATAACTCT

Gene-mRNA-Prot

This transcript is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
XLOC_002098	XLOC_002098	Clytia hemisphaerica	gene

The following exon feature(s) are a part of this transcript:

Position

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
sc0000031	supercontig	sc0000031:810605..819980 +

Expression

Values :

    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.378617	0.860657	0.49256	0.225419	6.44073	6.70878	0.755189	1.76375	1.79237	1.64625	0.138658	1.72979	7.16507	7.67312	3.45599	4.45352	1.61575	4.25123	8.10766	5.92764	2.55011	0.963548	4.29042	6.337	6.60165	3.07341	1.1582	1.35527	0.00745813	0.836933

Blast

[Close]

BLAST of TCONS_00003764 vs. Swiss-Prot (Human)
Match: GRB10 (Growth factor receptor-bound protein 10 OS=Homo sapiens GN=GRB10 PE=1 SV=2)

HSP 1 Score: 151.754 bits (382), Expect = 1.401e-38
Identity = 117/447 (26.17%), Postives = 207/447 (46.31%), Query Frame = 1

Query:  424 IPSPREQRTNSITPRLVL-------QNIDKFDVTVQCPDGNLFKAGVFKAWTSFQLAWKIAHVRGMAEKIALIIEEHISDLHIKRLIEDHEIIHKVTTNWAPDSNNILVMSERISKYDLFNEPADYLPIEMFDTRSDFIEQPKNVRRSSLLRSIMTADQTPDLQGWVFVKAFDKQKWKKRFLRIKDKIVY--TCETDDENSEIKAIYRCDECYFYDCLAEFQVAHKTPYPHCFCIIP-KVVTSWHEIKCFCTTSERHLIGWMSGFRFAKYGQQLYTNFREAMVKEANLRRTNSARVSLLFRRSFGDNNNTKDNKATVDFSGQNGRVISDPMEALKIQSEMAFEIPKQTKR-----SSGTFPPSSIRQNVLDKKIWYHGKLDREQATKKLKKHGSKEGLFLVRESNSTHGNLVLTVITKKGRVSHHQIFKNKNLYGIE-HGPQFNSLE 1716
            IP+P  +     +P ++        Q   K DV V   DG      +    T+  L   + +     +  +  + EH   L ++R +EDHE++ +V +  A +S    +  +  +KY+ F  P ++ P +M      + +Q  N  ++ LL++ + +   P++QG++ VK   K+ WKK ++ ++   +Y  T  T  E   ++ +   ++   +  +A  +  +  P  H  CI P KV     E++  C   E+    WM+ FR  KYG  LY N+R    ++A L   ++   S+           ++++   +DFSGQ GRVI +P EA     E      K++ R     S     PS++   +   + W+HG++ RE++ + +K+ G  +GLFL+R+S S     VLT+        HHQ  KN  +   E  G  F SL+
Sbjct:  138 IPNPFPELCGPGSPPVLTPGSLPPSQAAAKQDVKVFSEDGTSKVVEILADMTARDLCQLLVYKSHCVDDNSWTLVEHHPHLGLERCLEDHELVVQVESTMASESK--FLFRKNYAKYEFFKNPMNFFPEQMVT----WCQQ-SNGSQTQLLQNFLNSSSCPEIQGFLHVKELGKKSWKKLYVCLRRSGLYCSTKGTSKEPRHLQLLADLEDSNIFSLIAG-RKQYNAPTDHGLCIKPNKVRNETKELRLLCAEDEQTRTCWMTAFRLLKYGMLLYQNYRIPQQRKALLSPFSTPVRSV-----------SENSLVAMDFSGQTGRVIENPAEAQSAALEEGHAWRKRSTRMNILGSQSPLHPSTLSTVIHRTQHWFHGRISREESHRIIKQQGLVDGLFLLRDSQSNPKAFVLTLC-------HHQKIKNFQILPCEDDGQTFFSLD 558

The following BLAST results are available for this feature:

BLAST of TCONS_00003764 vs. Swiss-Prot (Human)

BLAST of TCONS_00003764 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
GRB10	1.401e-38	26.17	Growth factor receptor-bound protein 10 OS=Homo sa...	[more]

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TCONS_00003764 (transcript) - C. hemisphaerica