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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00003754 ID=TCONS_00003754|Name=TCONS_00003754|organism=Clytia hemisphaerica|type=transcript|length=5044bp
ACATAATAGCCTATTATTGTCTTTTTTCCACCGAATCAATATTTGATCAA
CATCTATTTTCTCTTAACCTAACATGAACAATAGCGTAATCAAATATTCA
GCATTTTAAATTCCGAGATAGAAACATAATTGATTAACCAATGAGCGTTG
AGGGATGAAATCACATGTCTATAGAGGCTTTCAAAAAAGCACTATAGATT
TGACTTAAAGATTGCATGACAACGAGAGTGTAGTTTTGATGTTAAGAAAC
TTCAGTAACATCATAAcacataaaaaaagaaaagtctcGTTTGAGTTgag
gattgtttttttttgtgttagAGAGAAAGAGACGCTTTTCTTGAAATGGT
GTATGAATTTGCGCACACCATAACACACTACAAATACTGCACACTCTCTT
ACAAACACTGAAAAGTACTGCACAAGAGAAGCTACACCTCTATCACACAG
AGAAATTTTATATGTTACAAAAGAGAAGTTGAAGGACAACAAACTTGAGC
ATTTTTCGTTAAcgtgaagaaaaaagaagagagaatattttaaaaataaa
agagctctattacacaaaaatataaaggaaaatttataGATGTATGTATA
AACTACTATTAGAACAGAGAAATTAAATATAAGAGATAGAGATACACATT
TATAAACAACAATGCTACACGCTGAAGAGTACTACGCACCCACCGATGTC
GGACTAAAGAAAGGCGAAGCCATGTATCAAATGGCTAACACAAACATTTT
GCAGGAAAACATGGGGCAACCTTTAAACGACAAAGTTGGTAACACAACAT
TATTAAACGAAATGGGTGAATTTAAACCTATGAATGGACAAAATGGATCA
AGTAATATGGACGAACAAAGAGCTCTTCAACTTGCTTTTGAACTTTCTAT
GTTGGGTTTGACAAGTGAGGAAGAGATGAGTTATAATGAGTTACGCATGA
AAAAATCGATGAACATGACGGAATGTGTTCCAGTCCCTAGTTCGGAGCAT
GTGGCTGAAATCGTTGGCCGTCAAgGCTGCAAAATCAAAGCTCTTCGCGC
CAAAACCAACACATACATCAAAACACCAGTTCGTGGAGAAGAACCTGTCT
TTGTCGTCACAGGTCGTAAGGAGGATGTCGGTATGGCTAAACGAGAGATC
CTGCAAGCAGCTGAACACTTCAGTCAAATCCGTGCTTCAAGACGAAACAG
TTCTTCATTATCACCACTTGGTTCCCCTGCACCAACAGCTCCTGGCCACA
TCACGAAACAAGTTCGAGTTCCTTACAGAGTTGTTGGTCTCGTTGTTGGA
CCTAAAGGCTCTACCATCAAACGCATCCAACAAGCTACCAACACTTATAT
TGTGACACCTTCACGTGATAAGGAGCCCATCTTTGAAGTCACAGGTCTTC
CTGATAATGTTGATCGAGCCAAACGTGAAGTTGAACAACACATTGCTCTC
CGAACAGGTGGCATCTTTGATCCAACTCATCCAGAGCTGACTGATCAACT
CTTGAACGGATTTGGCAACTCCAGCTTGTTCTCACCAACCGGCTCCTCCA
GCGGTGGTAGCTTCTCATCCCTCCTGGATAATCACTCGACCAATCCACTC
TGTCAACGCTCACATTCGGTGGATTCGTTCAGTTACCTTAGTGGACAATC
TAATGCTTCATCTAAATTCTCAGATCTCAGCTCAGCTGGAACCAGCCCAT
tcaacaataacaacaacaacgCTTTCTTCTGTGACACTGTCATCCCATCA
CCAACAGCTGACATTGAAAATGGTATGGGACAATTCGACCCAGCTCCTGG
TTCACCTGCACCAAGCTTATGGCCAGAAATGATGATTCCACGCTCAGCAG
CCATTGGACGACTGGGTGGCCCTCAAATGCAACCGATGCCACCAACCAGA
TCTCTCAGTGTCAGTACATTTACACCTGAGAATAGTGAGGTTCCTCAACT
CCGACGTTTGTTAAGCGAATCAGCTGCTGACCCATCTGCTGACTTACAGT
CCACCTACTCTCACTTTAACGGAACCACAGTCACCAGTACTGTTCAATCA
CCAATGATTCCTGAAGCTTCAATCATTGATATGACCAAGGTCAACACCAG
TGACGGAGAATCACAATCTTCAAGCCCCGATTGGATGGCCAACAAGCAGA
ATGGTTTACCAACCCAACAACCAGTACCTGGCAAGAATCAATGCTTCATT
TGTAATACTGGTAAAGTTGTGGCAGCTCTGGTACCTTGTGGTCATAACTT
GTTCTGTCTACCATGTGCTGAGCAGATGAAAGAGAACGAAGGAGATTGTC
CAGTTTgccaaaagaaagttgaagcCTTCCTAAGAATCATCTCTTAAATG
GAATGTGAGAAGGAACCCCCTCGAAAAACGAAAAAGCCttgtaagaaaga
aaattttgacttttattttttttggtctCGTTTTTGGAGACAACTTTTCT
TACTTCGACTTTTAGAACATTATAAAGGGTAGTGATTTGCCTCCTCTCAA
CAACGTGAAAAGGCTTTCTTTTTTATCCACAAAAAGGTTGGTGATATGAT
ATGTCTTCCCTTTTTGTTAAAGTTTTGTCTCGAGATAATAATCACTAACC
TTTATCCAACCCTCTCTTATCCTGCTGTATAGAAAAACTTCTTTTCGGGA
TTTTCGAATGCGTTGGTCTTCTTTTTTTACTGTACATATATAATCAGAAG
TTTCTGAAGAGAGGGGGGAAACGATACTTTCATGAGCGCACGCGCGACAA
TATGACACGATCCTAAAACGAGAGGGTGTATCAAAGAAAGTATCCAttca
gaatttaaaaatattaaaaaagaatttaataataaaaaagGGTTATTATa
gaaaaagattattttttaaacagataaaatttttttccagaacTAATAAT
TTGTATTGTATTTTGTCAAACAGTCAGTATTTTTGTTGCCCTGTTCATTA
TTATTTTAGTCCAAAGTGTTTTTTGTTAATCCATCTCTCTTTTCCTTTTC
CTTGATCTACTACTTCAGTGCTTTCTGCAGCATTTAGGTTCTACCTGAAC
TATTTTAAAACGTTTAGTGTTGTACAGGCTAGTTTCAATTTCTTAGACTT
TAGAGTCTAGATCTTTGTCTAATTCTGAACTGTGGAAAGCAGACTTTTGG
GTAATTTAAAAATGGTTACACTTTAGAAAAGGACTAAGAGAGGTCGATTG
ACAATATCCACTCTAAAGATAAAATTTAGCTAAATAATTTCATCGCTTTA
TTAATAATATATAGTTTAAGAGAGAATTTTACTTGAGGTTTTTTGTCACT
AAAAATTATTACGCTAGGAGAGAATAATAATGGTATTATTATAATTGAAA
CATTGTGAAaggtttatttttttatataaatattaCTACTAAAGAAAGAT
ATTATTGTTTTTGTCCTATCAGAGAAGCTATGACACACTTTACCTAacac
aaaaacatcaaaaacaatacaaaaaaaacaatttttgataattttttatc
aaggaattattttttttcgtttttgttgttTATAAAACGAACACTTTACT
TAATATAGTTATTATTATGATCATagagaaagaaaattattaaatacATT
TTGACCTATATCGAGAGACTGAGTGATGGTGCATTTTTGAGTGtgcgaga
gaaaaaaaatactttcgaatatgataattttttataaaatataaatagtt
gaaaaaggttggaaaatattattattatttagaaAACACGCCTGAAAAAT
GTTCGTTTTTCAGTAATTCATTTTGCATTTTAGAGTTTTTGTAGTATATA
TGCTTATAATTATAATTAGTGATATgggtttatttttttcttctgttcAA
TTTTAACGGTTTATTTTTGTCTTTCTCACTCAACaaattattttgcaatt
ttaacctttccttttttttgtatattttttcataGCGGCAAAAATTATCT
TCTCAAAGTTAAAGAGTCATTAATCTTAAATTGGTCTAGGTAATAGGTAT
GCTTTCCAAATCAATTAAGAGAAACATCAAGAGTGCTTTCCTGTATATTG
CAATTTTCCTGTCCCGAAGTAGTTATCTTAAATTGCCGAAAATCAATCTT
TCTCATTATTTGTTATGGTGAAATTATAATCAAAGACTTTGGGCTTGCTT
AGCCAATTTTCTTGATGATGTGTTTATTCATTTCAATTGTCACAAACTTC
CTGAATTTGTCTCGATTAGTTAAGTCCCagctttcttttttcaaattcat
aatggcggccTAATTATTTTGTTGGTTACAAGGAAACAAAGTTGcggaaa
acattttcaaattggtCAGCTTTTTAACGACTTCCTCTGATGGtcatttt
catcttttcttttaattacgttgagaaaaacattcaaaagaaGAGCGGAA
CCTTTCTTCATAAATTACCATGTGTTTGTGTTTACTTTAGatgtttcgaa
tttttgaaTGTCTTTCCCATTGCATTCAGTGAGGTATTTTGTGACATGAT
AATTAATGTTTTATTCACTACTCATCTGAAAATTAGCTTAGTTTTAGTAA
cccattttaagaaaatttgcactccttaaaaaatgcactttttacAGACA
GCACCTACTTCGATTTATGAAACGACCAGATTATTTTGATGTGTTTGTTT
GTGACAATTGTAAAAGAAAAAGTATATTTTGCTGTGAAAAATGCTATAAC
ATAAAAtgtttgataaaataattattagTAGTAGATAACGataatgatat
tttttgctTTATATATATAATTAATACTACTTTTTCTGTTAGAGATTTAT
ACCTtatatacaataataaaaaatctACTTTGCAATGACCTTACTACTTA
TGAGAGATGAGAAAACGAAATTATTGTATGTAACGAAAACAACAATTTTA
TGATATATAATAATGACGATTTCGcctattttttaatatttaaaatgtat
atgtattatcagacaatattctccaaaaaattattattactaTACAGTCG
aatagaaaaatttttatctttcaaGTGAAAGAATTCcattgttg Run BLAST on NCBI transcript from alignment at sc0000031:699143..709442+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00003754 ID=TCONS_00003754|Name=TCONS_00003754|organism=Clytia hemisphaerica|type=transcript|length=10300bp|location=Sequence derived from alignment at sc0000031:699143..709442+ (Clytia hemisphaerica)
ACATAATAGCCTATTATTGTCTTTTTTCCACCGAATCAATATTTGATCAA
CATCTATTTTCTCTTAACCTAACATGAACAATAGCGTAATCAAATATTCA
GCATTTTAAATTCCGAGATAGAAACATAATTGATTAACCAATGAGCGTTG
AGGGATGAAATCACATGTCTATAGAGGCTTTCAAAAAAGCACTATAGATT
TGACTTAAAGATTGCATGACAACGAGAGTGTAGTTTTGATGTTAAGAAAC
TTCAGTAACATCATAAcacataaaaaaagaaaagtctcGTTTGAGTTgag
gattgtttttttttgtgttagAGAGAAAGAGACGCTTTTCTTGAAATGGT
GTATGAATTTGCGCACACCATAACACACTACAAATACTGCACACTCTCTT
ACAAACACTGAAAAGTACTGCACAAGAGAAGCTACACCTCTATCACACAG
AGAAATTTTATATGTTACAAAAGAGAAGTTGAAGGACAACAAACTTGAGC
ATTTTTCGTTAAcgtgaagaaaaaagaagagagaatattttaaaaataaa
agagctctattacacaaaaatataaaggaaaatttataGATGTATGTATA
AACTACTATTAGAACAGAGAAATTAAATATAAGAGATAGAGATACACATT
TATAAACAACAATGCTACACGCTGAAGAGTACTACGCACCCACCGATGTC
GGACTAAAGAAAGGCGAAGCCATGTATCAAATGGCTAACACAAACATTTT
GCAGGAAAACATGGGGCAACCTTTAAACGACAAAGTTGGTAACACAACAT
TATTAAACGAAATGGGTGAATTTAAACCTATGAATGGACAAAATGGATCA
AGTAATATGGACGAACAAAGAGCTCTTCAACTTGCTTTTGAACTTTCTAT
GTTGGGTTTGACAAGTGAGGAAGAGATGAGTTATAATGAGTTACGCATGA
AAAAATCGATGAACATGACGGAATGTGTTCCAGTCCCTAGTTCGGAGCAT
GTGGCTGAAATCGTTGGCCGTCAAggtatgttttcatttttatttcattt
aatttgGCTTTGTTTTGGATGACATTCTACGATTTTTCTTTTACTGAAAT
TAAGATTTTCATTCTTAAAcgtttcagattttttttatgaatcttAGCTT
TGTATACAGCAAGGCATGATTTTTGATAGATTTTCTTCTAAAAGTTTGAA
TGTTGCTATTTCTCAATGCGATTGCCACTCCCCGCTGTATAttcaattct
gttttgttttttgttgtgatttttttgCCGCGCTTCTTTCGTCGAAAacc
ttttgtttcaattttttaaacagaCATTTGTCCATGCTGAACATAAGCGC
GAGAAAGTTTTGACCTAGCGTACATAACTCTACTGCGAGCATTCATAAAC
AACATTACTTGCAGCTTTACTACTCAAAAAAGGCCATGTgcgtttttgtt
tattttttaaagttttcccgcgtacaatttttttctttgaaagtttttgt
ttacttttcacgAAGACGTAATAAACATTTTATACTTTTTCTCACACAAT
AATAGACGATCAATATTTGTTTAGAGTGAGAGAGTACTTCTTATAAAAGC
TGAGAAAAATAGTTCTtcacaaaaaatataatatcagTAATTTTTAGCAA
ACAAATCTCGACGAAAGGATAACTTAGATTAATCCTTCTCAATTAATTTA
ACACATACTTTCACACGTAACATAATTTTCTATGCTAAAACAATCTAATT
TTCTTATCTAAACATCAATCActagaaaattataaaaaacggAGAAAATT
CAACAATCTTTTTTCTCTTTGCTAATAATATTGTGTCTCCAGCCTCCTAG
AGAGTGTCTTGGGGAATCATAGCCTGATATTTtcagtattttgaaaaata
tttgcaCGAACGCGAGAAGTCTTTCAAGGGGTAGGaaagtttttaaattc
tcatGTTTAATAACCTCAGTTTTAAATCAATGAATACAGAATCAGAAGAT
TTTTTCTTGTGCACAAAATGATTTGGTTTTGATTGATTTCTCATTTGGTT
AGAAATAATTCACACACTCACTCACTTTCGATTGTTAGTAAAATCTCATG
AAAAGTTGATGAATAAAGCAAGTATTGAATCCCAATAGACGCTTCGTGCT
GCGAAATAATATTAATGAATTTTTAAGGTCCtcaatcaagattttgaata
tctttaatATTATGGTGAACATAGCAttatctttttctgaaaatctttgA
ATGACTTTTTACTTGAGTTActtatacatttttttcatttacttttcttc
ttttattatctctcatatatatttttttggtcAATCATCTTTTCCTGAAA
TATTAAAACCTATTTTTCGatcaactttttataaaaaaatccggtctcat
ttttgtttttatctgcaaaacgtgttttttttctttttctttattatttg
tAGTTTATCATATTTTCCTTGCAATAAAGCTTGTTCCTTTGATCTCATCG
AAAGTCATTTTAAATCAACTTATAAACTTTTTacctaaaaagttgaaaat
aaagcTCTCAAAAAGTCGTAATTAGGAAGCTTATTTTCTCGATGCTTTGC
AATCAAGCGTTTTCAATCCGAAAAAAAACGTCTTTAAAATGGAAGAAAAC
ATGTGTTGGAAAATATACACTAGTGAACACGAAGAAaggaataaatcttt
ttttttcattttaatttctttttacttcaaaaaacctttcccctttttta
ttttggtgacACGACCGCATACTCTTTAGATACGATATATAACGAGAAAA
AAACTCTTAGTTTCGAGACTGTTcagatttttgttttaaatacaGTATAG
TCCATCATAACATATGATAAAACAAATTTGCAACAATGTACAAAAAATTA
AGGggataaaacattttaaaactctTTTCTCTAAACGTTGCTCTCTCGTA
ATTCTTTTTAGTTTACAGCTGCCATCTTTCTCTGAAGCATTATCAAAAAT
GTGGCATAACTTTCGTCCCCCTTCTCTTTGTTAATCTATACTAATTACCT
TAGCAGGGTTTTAAACTCTATAGACGTGCCTGTTTTTCCCTTCAAAAAGT
ACCTTTAAATTCACACATTGATATGTTAAAGAATTTTCACATCCCTTTTC
TTCCCTCTTTTGTTTCTCATCTCCAGTCCACCCCAGTCTTCTTTTGGATT
AAAGTTGTGCATAGCAGCAATTTTCCTTTTAATACTGGAACACTTTTTTT
AAGTAAAGATAAAATCTCTCTGttttagttttcaaaaagattgaaagata
GACAGttatcttttttcaaataaaaactgttGAAACCGAAATATATTTTC
GCAATGATatctattccaaaaaaatatgCAATCTGTACTTTTTTTAACAT
TGCTCTTGAGGGATAAAAGAAACAATTATAGGTACATAATGCCTCTTCGG
TATtaagttcaaattttcaaaaagtacaccttcttttttataaaaacatc
ctaaattttcgaagccttaggatgtttttagttttttgagttttaagcct
aaaaatgttcttgacataatcttattttcaccaatttttgagtatttttg
tccattttcctaagaaattagtcgttttagagtctgcgaagccttaaaat
gttcttaacttgttcttaacattttggccatcgaagccttatgttcttat
ttagttTATTCTTATCCAGTAGATAAAATCTTTTTCACATTCAGTGTTaa
acaaaacttcaaaatgcctATCTTtcttgtttacatttgaaaactcGACC
TTGCTATAAGGTCAATCAACGTCATTAATCATTTACAgttgaagaaaaaa
tcttttgttctGTTTATTTACTTATATTGTTAAGTTTTGTATGCACACAA
GTGGAAGTTATATACATAAGCTTTTTGTTTACACATTTGTTCAAGATCAT
ACATAACCATACTTTCAATTATAACCACCTTTTGTAAACCTCTTTCCGTC
TTTTACACTCTCGGTGCTGGCACACAATCATATAAGATCAAACTTATGGT
TTCAGTCCTGTCTATCAAGAATTCAGAATGGAGAAAGAATTCTATCTAAT
CGGAATTCAGCATCGCAAGTTCTTCATTTTTGCTGACCAAACAATGTAGC
CTGCTGTCGGACCTTCTGTTTTCACATCATAGAAAAATTGTTATAGAAAA
TAAGGTTACATCTGATGATTGCTTAGAGCATGAAACTCCGAGTTATggat
ttataaatttttggttttgaaatatatttttgattagaAAATAAGCTCAT
AATCTCTCGGTTCTCTTTTTTTAGGCTGCAAAATCAAAGCTCTTCGCGCC
AAAACCAACACATACATCAAAACACCAGTTCGTGGAGAAGAACCTGTCTT
TGTCGTCACAGGTCGTAAGGAGGATGTCGGTATGGCTAAACGAGAGATCC
TGCAAGCAGCTGAACACTTCAGTCAAATCCGTGCTTCAAGACGAAACAGT
TCTTCATTATCACCACTTGGTTCCCCTGCACCAACAGCTCCTGGCCACAT
CACGAAACAAGTTCGAGTTCCTTACAGAGTTGTTGGTCTCGTTGTTGGAC
CTAAAGGCTCTACCATCAAACGCATCCAACAAGCTACCAACACTTATATT
GTGACACCTTCACGTGATAAGGAGCCCATCTTTGAAGTCACAGGTCTTCC
TGATAATGTTGATCGAGCCAAACGTGAAGTTGAACAACACATTGCTCTCC
GAACAGGTGGCATCTTTGATCCAACTCATCCAGAGCTGACTGATCAACTC
TTGAACGGATTTGGCAACTCCAGCTTGTTCTCACCAACCGGCTCCTCCAG
CGGTGGTAGCTTCTCATCCCTCCTGGATAATCACTCGACCAATCCACTCT
GTCAACGCTCACATTCGGTGGATTCGTTCAGTTACCTTAGTGGACAATCT
AATGCTTCATCTAAATTCTCAGATCTCAGCTCAGCTGGAACCAGCCCATt
caacaataacaacaacaacgCTTTCTTCTGTGACACTGTCATCCCATCAC
CAACAGCTGACATTGAAAATGGTATGGGACAATTCGACCCAGCTCCTGGT
TCACCTGCACCAAGCTTATGGCCAGAAATGATGATTCCACGCTCAGCAGC
CATTGGACGACTGGGTGGCCCTCAAATGCAACCGATGCCACCAACCAGAT
CTCTCAGTGTCAGTACATTTACACCTGAGAATAGTGAGGTTCCTCAACTC
CGACGTTTGTTAAGCGAATCAGCTGCTGACCCATCTGCTGACTTACAGTC
CACCTACTCTCACTTTAACGGAACCACAGTCACCAGTACTGTTCAATCAC
CAATGATTCCTGAAGCTTCAATCATTGATATGACCAAGGTCAACACCAGT
GACGGAGAATCACAATCTTCAAGCCCCGATTGGATGGCCAACAAGCAGAA
TGGTTTACCAACCCAACAACCAGTACCTGGCAAGAATCAATGCTTCATTT
GTAATACTGGTAAAGTTGTGGCAGCTCTGGTACCTTGTGGTCATAACTTG
TTCTGTCTACCATGTGCTGAGCAGATGAAAGAGAACGAAGGAGATTGTCC
AGTTTgccaaaagaaagttgaagcCTTCCTAAGAATCATCTCTTAAATGG
AATGTGAGAAGGAACCCCCTCGAAAAACGAAAAAGCCttgtaagaaagaa
aattttgacttttattttttttggtctCGTTTTTGGAGACAACTTTTCTT
ACTTCGACTTTTAGAACATTATAAAGGGTAGTGATTTGCCTCCTCTCAAC
AACGTGAAAAGGCTTTCTTTTTTATCCACAAAAAGGTTGGTGATATGATA
TGTCTTCCCTTTTTGTTAAAGTTTTGTCTCGAGATAATAATCACTAACCT
TTATCCAACCCTCTCTTATCCTGCTGTATAGAAAAACTTCTTTTCGGGAT
TTTCGAATGCGTTGGTCTTCTTTTTTTACTGTACATATATAATCAGAAGT
TTCTGAAGAGAGGGGGGAAACGATACTTTCATGAGCGCACGCGCGACAAT
ATGACACGATCCTAAAACGAGAGGGTGTATCAAAGAAAGTATCCAttcag
aatttaaaaatattaaaaaagaatttaataataaaaaagGGTTATTATag
aaaaagattattttttaaacagataaaatttttttccagaacTAATAATT
TGTATTGTATTTTGTCAAACAGTCAGTATTTTTGTTGCCCTGTTCATTAT
TATTTTAGTCCAAAGTGTTTTTTGTTAATCCATCTCTCTTTTCCTTTTCC
TTGATCTACTACTTCAGTGCTTTCTGCAGCATTTAGGTTCTACCTGAACT
ATTTTAAAACGTTTAGTGTTGTACAGGCTAGTTTCAATTTCTTAGACTTT
AGAGTCTAGATCTTTGTCTAATTCTGAACTGTGGAAAGCAGACTTTTGGG
TAATTTAAAAATGGTTACACTTTAGAAAAGGACTAAGAGAGGTCGATTGA
CAATATCCACTCTAAAGATAAAATTTAGCTAAATAATTTCATCGCTTTAT
TAATAATATATAGTTTAAGAGAGAATTTTACTTGAGGTTTTTTGTCACTA
AAAATTATTACGCTAGGAGAGAATAATAATGGTATTATTATAATTGAAAC
ATTGTGAAaggtttatttttttatataaatattaCTACTAAAGAAAGATA
TTATTGTTTTTGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNTTCCCTTTTTGTTAAAGTTTTGTCTCGAGATAATAATCAC
TAACCTTTATCCAACCCTCTCTTATCCTGCTGTATAGAAAAACTTCTTTT
CGGGATTTTCGAATGCGTTGGTCTTCTTTTTTTACTGTACATATATAATC
AGAAGTTTCTGAAGAGAGGGGGGAAACGATACTTTCATGAGCGCACGCGC
GACAATATGACACGTTCCTAAAACGAGAGGGTGTATCAAAGAAAGTATCC
AttcagaatttaaaaatattaaaaaaagaatttaataataaaaaagGGTT
ATTATagaaaaagattattttttaaacagataaaatttttttccagaacT
AATAATTTGTATTGTATTTTGTCAAACAGTCAGTATTTTTGTTGCCCTGT
TCATTATTATTTTAGTCCAAAGTGTTTTTTGTTAATCCATCTCTCTTTTC
CTTTTCCTTGATCTACTACTTCAGTGCTTTCTGCAGCATTTAGGTTCTAC
CTGAACTATTTTAAAACGTTTAGTGTTGTACAGGCTAGTTTCAATTTCTT
AGACTTTAGAGTCTAGATCTTTGTCTAATTCTGAACTGTGGAAAGCAGAC
TTTTGGGTAATTTTAAAATGGTTACACTTTAGAAAAGGACTAAGAGAGGT
CGATTGACAATATCCACTCTAAAGATAAAATTTAGCTAAATAATTTCATC
GCTTTATTAATAATATATAGTTTAAGAGAGAATTTTACTTGAGgtttttt
ttcactaaaaattaTTACGCTAGGAGAGAATAATAATGGTATTATTATAA
TTGAGACATTGTGAAaggtttatttttttatataaatattaCTACTAAAG
AAAGATATTATTGTTTTTGTCCTATCAGAGAAGCTATGACACACTTTACC
TAacacaaaaacatcaaaaacaatacaaaaaaaacaatttttgataattt
tttatcaaggaattattttttttcgtttttgttgttTATAAAACGAACAC
TTTACTTAATATAGTTATTATTATGATCATagagaaagaaaattattaaa
tacATTTTGACCTATATCGAGAGACTGAGTGATGGTGCATTTTTGAGTGt
gcgagagaaaaaaaatactttcgaatatgataattttttataaaatataa
atagttgaaaaaggttggaaaatattattattatttagaaAACACGCCTG
AAAAATGTTCGTTTTTCAGTAATTCATTTTGCATTTTAGAGTTTTTGTAG
TATATATGCTTATAATTATAATTAGTGATATgggtttatttttttcttct
gttcAATTTTAACGGTTTATTTTTGTCTTTCTCACTCAACaaattatttt
gcaattttaacctttccttttttttgtatattttttcataGCGGCAAAAA
TTATCTTCTCAAAGTTAAAGAGTCATTAATCTTAAATTGGTCTAGGTAAT
AGGTATGCTTTCCAAATCAATTAAGAGAAACATCAAGAGTGCTTTCCTGT
ATATTGCAATTTTCCTGTCCCGAAGTAGTTATCTTAAATTGCCGAAAATC
AATCTTTCTCATTATTTGTTATGGTGAAATTATAATCAAAGACTTTGGGC
TTGCTTAGCCAATTTTCTTGATGATGTGTTTATTCATTTCAATTGTCACA
AACTTCCTGAATTTGTCTCGATTAGTTAAGTCCCagctttcttttttcaa
attcataatggcggccTAATTATTTTGTTGGTTACAAGGAAACAAAGTTG
cggaaaacattttcaaattggtCAGCTTTTTAACGACTTCCTCTGATGGt
cattttcatcttttcttttaattacgttgagaaaaacattcaaaagaaGA
GCGGAACCTTTCTTCATAAATTACCATGTGTTTGTGTTTACTTTAGatgt
ttcgaatttttgaaTGTCTTTCCCATTGCATTCAGTGAGGTATTTTGTGA
CATGATAATTAATGTTTTATTCACTACTCATCTGAAAATTAGCTTAGTTT
TAGTAAcccattttaagaaaatttgcactccttaaaaaatgcacttttta
cAGACAGCACCTACTTCGATTTATGAAACGACCAGATTATTTTGATGTGT
TTGTTTGTGACAATTGTAAAAGAAAAAGTATATTTTGCTGTGAAAAATGC
TATAACATAAAAtgtttgataaaataattattagTAGTAGATAACGataa
tgatattttttgctTTATATATATAATTAATACTACTTTTTCTGTTAGAG
ATTTATACCTtatatacaataataaaaaatctACTTTGCAATGACCTTAC
TACTTATGAGAGATGAGAAAACGAAATTATTGTATGTAACGAAAACAACA
ATTTTATGATATATAATAATGACGATTTCGcctattttttaatatttaaa
atgtatatgtattatcagacaatattctccaaaaaattattattactaTA
CAGTCGaatagaaaaatttttatctttcaaGTGAAAGAATTCcattgttg
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00003754-exon-sc0000031-1491911889:699143..700167 | TCONS_00003754-exon-sc0000031-1491911889:699143..700167 | Clytia hemisphaerica | exon |
| TCONS_00003754-exon-sc0000031-1510915933:699143..700167 | TCONS_00003754-exon-sc0000031-1510915933:699143..700167 | Clytia hemisphaerica | exon |
| TCONS_00003754-exon-sc0000031-1575043694:699143..700167 | TCONS_00003754-exon-sc0000031-1575043694:699143..700167 | Clytia hemisphaerica | exon |
| TCONS_00003754-exon-sc0000031-1491911889:703467..705792 | TCONS_00003754-exon-sc0000031-1491911889:703467..705792 | Clytia hemisphaerica | exon |
| TCONS_00003754-exon-sc0000031-1510915933:703467..705792 | TCONS_00003754-exon-sc0000031-1510915933:703467..705792 | Clytia hemisphaerica | exon |
| TCONS_00003754-exon-sc0000031-1575043694:703467..705792 | TCONS_00003754-exon-sc0000031-1575043694:703467..705792 | Clytia hemisphaerica | exon |
| TCONS_00003754-exon-sc0000031-1491911889:707750..709442 | TCONS_00003754-exon-sc0000031-1491911889:707750..709442 | Clytia hemisphaerica | exon |
| TCONS_00003754-exon-sc0000031-1510915933:707750..709442 | TCONS_00003754-exon-sc0000031-1510915933:707750..709442 | Clytia hemisphaerica | exon |
| TCONS_00003754-exon-sc0000031-1575043694:707750..709442 | TCONS_00003754-exon-sc0000031-1575043694:707750..709442 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000031 | supercontig | sc0000031:699143..709442 + |
Blast
BLAST of TCONS_00003754 vs. Swiss-Prot (Human)
Match: MEX3B (RNA-binding protein MEX3B OS=Homo sapiens GN=MEX3B PE=1 SV=1) HSP 1 Score: 269.626 bits (688), Expect = 6.148e-77 Identity = 160/216 (74.07%), Postives = 181/216 (83.80%), Query Frame = 2
Query: 857 MDEQRALQLAFE-LSMLGLTSEEEMS-YNELRMKKSMNMTECVPVPSSEHVAEIVGRQGCKIKALRAKTNTYIKTPVRGEEPVFVVTGRKEDVGMAKREILQAAEHFSQIRASRRNXXXXXXXXXXXXXXXXHITKQXXXXXXXXXXXXXXKGSTIKRIQQATNTYIVTPSRDKEPIFEVTGLPDNVDRAKREVEQHIALRTGGIFDPTHPELTDQ 1498
+D+QRALQLA + LS+LGL S+E S Y+ KKS+NMTECVPVPSSEHVAEIVGRQGCKIKALRAKTNTYIKTPVRGEEPVFVVTGRKEDV MA+REI+ AAEHFS IRASR +++L+ P PG T QVRVPYRVVGLVVGPKG+TIKRIQQ T+TYIVTPSRDKEP+FEVTG+P+NVDRA+ E+E HIALRTGGI ELTD+
Sbjct: 28 LDDQRALQLALDQLSLLGLDSDEGASLYDSEPRKKSVNMTECVPVPSSEHVAEIVGRQGCKIKALRAKTNTYIKTPVRGEEPVFVVTGRKEDVAMARREIISAAEHFSMIRASRNKNTALNGAVPGPPNLPGQTTIQVRVPYRVVGLVVGPKGATIKRIQQQTHTYIVTPSRDKEPVFEVTGMPENVDRAREEIEAHIALRTGGII-----ELTDE 238
The following BLAST results are available for this feature:
|
