TCONS_00003720 (transcript) - C. hemisphaerica

Overview
NameTCONS_00003720
Unique NameTCONS_00003720
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2576

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00003720 ID=TCONS_00003720|Name=TCONS_00003720|organism=Clytia hemisphaerica|type=transcript|length=2576bp
AAAATAATGAATTGAAATTTCTTAATCACTTATGGAAACCCTTTTTTTTC
GTTTGTTGATTGTATGATTAATTTTTAAATGGATATGTCGATTTCGTCGT
TTGGATATTGACTTTAGAGTGCATATTTGATCGTCGCTACATCAAATATC
AATCAATTGTTACAGAAACAAGAACTGTTCTTTATCGGTTGggccttttt
ttcatttttctattttggcgAAAGGACAACAACTGCTCgtgaaaaacaat
gaaaaaaatggTGTAAGAAGTGCGAACAAATATATTGTTCTTATTCGTAA
TGGAataaaataagcataaattGAGAATCATCATTTGTTACTGCTATGAA
AATTGGTTTCGGACGGGTTTCAAAAGATCTGACCTTAAttaactttgaaa
aatatttgatatgAGATTTCAGTTATTTTTTGATAATTGCTTAGTATTGG
TATCGATATTCTTTTACATACAAAAATGCGATGGATCGCATGTAAAATAT
AAAGGgTGTAAAGTTTACCAGATAGAAGCAAAAGACGAGAGCCAAATTCA
GAAAATCAAACGATTTATCAAGTCATTTCCAACGCAAATCGATGTTTGGT
CTGATAGTCCACAACATTGTCAGTTGATGGTCACCAAAGAGCAAAGCATC
AAGTTGGACGCATATCTATCCAAAGAAAATATCCAAAGAAAGATTTTGAT
CAAAGACGTTCAAAAAGCAATTGATAAAGAACTAGAGGATAACGATGAAA
GAGTCAAGCAGAATGTATACAGCGCCTTCAGGAGGAGGAGGATATTCAAT
TACAAGAGATTCAACAGGTTTTTTGATATACTTCACGAGTTGAAACGGTT
ACAATGTCGGTTCAAGAAGAAGATGGAAATAATGGAGATAGGAAGATCAT
ATGAAAGAAGACCACTTGTCGTCGTAAAAATAACAAAGAATGTTTTAAAC
GAATGTATATCGAACAAGAAGATCGTTTGGATAGATGGTGGAGTACATTC
TCGTGAGTGGATTAGTGTGGCTGGTGCTATGTGGATGATAAAAGagCTCT
TAATTTCCAAGAAAGCATCGATCCAAAAGTTATTAGAAACACATGTTTTC
TACATCGCGCCTGTCTTCAATCCGGACGGTTATGAATATACGTTCACCGA
TGATCGTTTGTGGAGAAAGACGAGGAGACCAACCAACAAAAAAGGATGCA
TTGGAACGGATGTCAACAGGAATtggaatttcaaatggggacTTGACGAG
AAAAATAAAGAGCCCTGTGGATTAACTTACCACGGCGAGAAACCCGAATC
GGAAATATGTGTTCAACATTTTGCTCGGTTATTCCGTTACATTCAACCGA
GGCTTCTATCATATTGGACTTTGCATTCTTATGGTCAATTAGTTTACGTA
CCATATTCATATACCAATTCAAGCACTATTCGTATTCCGAGAAAAAGCAA
AATCACGGAATAATCAATTCTATGGTTTAGGAACCACGCATGTTTTAGAG
AatggTCTCTTACTATTTGGCACATCAATAGATTATATACATGGAGCTCT
AAACATTACATACTCTTTCAACGTTGAGATGAGACCAAGTGAAGCGACTC
TCGGTCAAAATCAAAACCCAACAgaactttttcttctttcaccGAAATCT
ATAGTACCAGCATCCTCCGAAGTTTTTGATGGAATTATTGGAACTGTTGA
GCATATTTATGGACGGACTGAAAACCAAGTATAAAGGATTAATATAGACA
GATCCTGATCTGAAACCCTGACAATCTCGCACTCAGACTAACCTGCCTCG
CTTTTGAATGCTACTAATGGGCATGAGAAATTCGTTTAATAAATTCCTAT
CCTGAGAGTTATTTAGATCATGAAAATTCGAACTCagagactgggttcga
gtttgaaaGCTTTATAGAGACATGGACATGGTGTTCTTGAAATAGGGCGC
CGCACTAATGACAAATTCATTTTATGACAGCTCGATGCAAAcaagaatag
acgatatcggctttaccgaattctccccgaatgactacccatgatgcatt
gcgcaaaaaaattcacggacgaattcggggagaattcagaaagccgatat
cgtctattcttgTTTGCATCGAGCTGTCATAAAATGAATTTGTCATTAGT
GCGGCGCCCTATTTCAAGAATATCCCGCTATAATTTGTTGTCATTACCAG
TCTTTTCAGTGATGCGCATAGCTTGCGAATCCAATACACCTTATTAGTGT
AAGCTCGTTTGTTTTCAACCATCCCTTTAGAACTGTCTGTGTGTGTAATC
TGTTTTCAGGTTCAATTTCACATTCTTTAACGtctcttaagggctctgga
tctacgcaatttttcgattttacaccaacttaaatggcaatttctgcatt
tcaaaaagattaatgtatgtactttttttatatgtcctgttaaacctacc
tttttagaatttaaaaatcgaaaaattgagatgaaaaaattaaatggagA
AGAAAACGAagggtttttcgaagaagagtatttcacctttcaaagcccta
atctcggtaaaaatcaaacattttgg
Run BLAST on NCBI

transcript from alignment at sc0000031:16395..28705+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00003720 ID=TCONS_00003720|Name=TCONS_00003720|organism=Clytia hemisphaerica|type=transcript|length=12311bp|location=Sequence derived from alignment at sc0000031:16395..28705+ (Clytia hemisphaerica)
AAAATAATGAATTGAAATTTCTTAATCACTTATGGAAACCCTTTTTTTTC
GTTTGTTGATTGTATGATTAATTTTTAAATGGATATGTCGATTTCGTCGT
TTGGATATTGACTTTAGAGTGCATATTTGATCGTCGCTACATCAAATATC
AATCAATTGTTACAGAAACAAGAACTGTTCTTTATCGGTTGggccttttt
ttcatttttctattttggcgAAAGGACAACAACTGCTCgtgaaaaacaat
gaaaaaaatggTGTAAGAAGTGCGAACAAATATATTGTTCTTATTCGTAA
TGGAataaaataagcataaattGAGAATCATCATTTGTTACTGCTATGAA
AATTGGTTTCGGACGGGTTTCAAAAGATCTGACCTTAAttaactttgaaa
aatatttgatatgAGATTTCAGTTATTTTTTGATAATTGCTTAGTATTGG
TATCGATATTCTTTTACATACAAAAATGCGATGGATCGCATGTAAAATAT
AAAGGGTAAGTCATTTACAGTACATACAGGGAGACGTGTTCTAGTTTGAC
AGTGTTGTGACAATATTAGCCTATTTCGTGCATCTGTTACATGCTTTATT
CTACTCAATTATAAAAGATGTCCTTGCGATTTCCAAACAGTCACAAATCT
ATTAGCGGATTTTGAGCTTCATTCAAGATGCCTGACAAACTGAGACAAAA
TGTCAGAAAAATTTCCCATCCAGCgtagaaaacattttaaaaaacgTTAA
AGACAAACGTTAACAACATTTTGGGCAAGTTGGGGAGGATTTCAAGGCTT
TGAATCTTCAAAAGGCTATAATAACAACGCAATACACGAAGCAAATTGTA
GAGTTGAATTATTTGCTAGattaaattctgcaaatttttcaacttccTTT
ATCGGTTTTTAAGTGAAGAAATTAACAAACACTTGTTAATATTCAAAGAA
AGATTTACTGCTCATCTAATTTGGTAGTGATAGTTTAGTTTTCAGTCAAA
ATGAAGTGAGTTAACATATAGTGAAATTATGACTAatgtatttttttctc
gatagAATTAAGTTTATTCGGTCACATATGAATATACCCAGTTGGCacaa
acattgtttcaacgttagaCTAAAGAACATTATATGGCGACGTTATGAAG
ATTTGTTAGGGTTGAAACAGTCGTTATGTGCGAGCTAGTTTATTTTTGGC
TGAACATGATCATTCCATTACTATAAAAATGATACCATCATGAATGTTTC
TCGCTGGTTGTAGGAATAATGTTGTATTGtactttttgtctttttcaggT
GTAAAGTTTACCAGATAGAAGCAAAAGACGAGAGCCAAATTCAGAAAATC
AAACGATTTATCAAGTCATTTCCAACGGTAAGGCTCTATATTCATTCCTC
CTTGGGAAAACTATACTAGATTATACTGGAGAGtggattgttgttgttgt
ttgttcaGATATTCTATTACCAACTCCAAAATCAATATATCCAAAGTCAG
AAAATATTTATCTAACTTTGGCTAGAGGATCTATGGTATCATTGAGAAAT
ATTCCGATATATTCAACATTCAGTTATAATTTAAAGAGCTAGATTTAGAT
ATTAGCATAATACTCTCAAGTTGGACCACTAATACCTCTATTGTgttaca
aaaatgttttttgttttttaattcaaaaacaggataaagtttgatttctc
tttACTTCCTAAAGATATTAGTTGAAAAACAGGAAGAAAATTCATCTAAT
GcataattattgaaagtttggtCCAGATGTCGCTACAATTACCGCCCGAT
CGGGCAATTTACTCTGGCCCCTTcccaatttaaaatttaatggGAAAAAA
CTTTGAGCATTGGACAAGAGACGCGATTGGGGCTTTGATAGAAACTATCC
ATCATTTCAGTAGAGTTTCCGTCGGAACTTTGAGAAGGGGATGTATATGT
AGTATCTTCGGTGTTGACAGTTCTTAATATGGTTTCATTTCATACCCAGC
AGGCACACAACCTTGTTTCAACGCCCATCTAACGttaacaacgtccattt
aacgttggattaacgttgaaacaacgttgtttgtCAGTTGGGTAGGTTTA
ATGGCCCGGAATGGTGCATGGAAATCGCCAGCTTTCCTAccaattaaaat
tttgatatctagaaatattttgataatttcttcgctttgctcAAGTGAGG
GATTGAAAGGACGGAAGGAGTttacgagaaaaaaatcagGTTTCAATTCT
TTAATTTTGTTTCCTTAATTGTAAGGAAATTCGTTCACTTCTCTTTTGGT
TTTCTGTACGTGCCATAGAAAACATATGATAAAAACAAGTAATATTAATT
TCTACTTTTCTCAATgtcaaaaacgtaaaaaaacataaagaaaAACCAAC
ACTAAGCAATGAGAGAAATATGGAATTGAAATTTGGTCGGAAAaagattt
tgacttttattttcatcttcatattcaatttatatgaaaaattatttata
gATCACACAAGTCCActtgaaattatctttcttaCAAAGTATTACCTTTA
AacatagatttttttctcatacGAGCAATACTCAAGAATGTGCTTGAAGT
TACATAAATTGTAAACTTACATATCTAATTAGATAATTGCATGCTTATGT
CAAACATATATTATACCATTATTACAAACACGCAAACAAACAATTTATTA
CTTTGTAATTCTTGCAGACTTTTAATTAAAGCTGCAGAATGATATTTCCG
TGGGAACCGCGCGCCGATTTGCGACAAACTTGGATTCATAAATGAGTCAT
AATGCTCCATATAAAATAGCTGAGCTTTAACATGGTTtctattaaaatgt
ttttatagaaCCTgttagatttcaaaattttaatctttaattttttcaat
tttaaataaaaagttctcctaaaattttgttttatttataatttGTTCGT
TATTGCAAATCTAAAATTTGGGTATCAGGGTTTTTTAGTTCTTCAAAAGT
TTTAAGCATAAATGGATCAtttttgccaccggaggaagcctaaagcttct
gaggatggcattcatagcttcacgcataaggaagttgggcaaacatctca
taattttgcgNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNcgcgtt
tttcagtattttagttccgcttaacggtagcattcttatcttacggtctc
tctattgttttatcatcatcaaNNNNNttatcatcatcaaaaagactttt
ccggagttattttgatctgattactcattttgaaatgtcagtttgtcttt
ttcttatccctggagagttaaatgaattcccttttctgggaaattccctt
tttataccacaagtagtttgtaagcgctcttcataggttaaaaatattac
tctactcaaagtattGGAACggttatgttgctaaacgtgtacattagtaa
aataacatatgaagagcagtatcttcagatatatacgctttttataggaa
aaaccagtaagtcatatgattNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNttaaatttatatgagtttttcagcc
ttaaatgtcaatattaattaaaatggaaacatgtacttctcagtaatttc
tgaaatctgaggttcagattcttcttaattagttcttaggttttggccaa
atttcagcctcgtatttttatgaaatttttcttataaaaaacgtgtaaga
caaggcacggatgtcactctaagtagactgtaaatcactcccttgacaca
tttgttagcatttgaaataattttgtctcagatgagaggtcactcttaac
aaaaattactgtagggctaagatcttTCCTTTtgaactctatgtgttcgt
tttgctgcggtggcaccttaatgaaagttatggctagttaaAAATAATTG
CTTGATAAAATCTGCATATCATCACTTTTTTTGGCTCAGTTTCAATTGTA
AAACATATACATATACATAGAGAAAAATATCGATTTTATGGTCATCagaa
ttttttctttgtgattTAAGTACAAACAGTTACCAATTTCTAATTCGACC
TACTTCAATGTGATgcactccattattcgataatattgaaagtcaccgtc
agagaaactctcataaacgacattTTACCATTTCATACACTCCTTTTTCA
GatgaaaattctatttttctctaaaatcgAATTATAGAATGGCAACTGTA
TAAAACTACTGGGAAAATTTTCTGAGTGAATAGATCAATAAAGTAAATTA
TATGGAAAGCTGCATATTCTCATTTATACCTCACACGAGATCATATTAAA
GTAAATTTCTAATAAGATTTTAATTGATCAATTTTCCAAATTGGAAAACA
AACATGTCATTAGAGGTATGCTAAGGACTTTCCAATCAACGGATTCTTAC
TCATGAATTTTcatcaatattttctttcactCAAAACTGCATTAATTTGC
TGTATATTAAGTTTTCTTGGTTAATTAATGGCTCTTAAACGTCCTCATAG
AGTCCTCATGAGGACAAGTAGCAaaccagctgacacacaacctTGCCCCA
TACAATGTCATATTTTGACGTTGAGTGTCAATCTCATCTTGGAACTTTTT
AATCTAACCCCTGTAAAATAATGGCTGGCtacaatataaaaaagacacac
ctgtctcacagccccggtgggacATCTCTCAACACATCGGGGATGAAAGT
TTCGATCAAAATCCAAATTGGGGGTAGAAATTTACTCTATCTTCATCATC
TCAAAAAATCCAggtagaaaattttggagagCAAGTTtctccattgaatt
tcaaataggATGACAATAGAGTCAATATCCAGTGGGGCTGAAGTATTTTT
CCCACCGAGGAAATGATTCAAATTTctggtggggtggaggtcccaCCGGG
TTTTTGACACAGGGATGTTAGCAGAAAAGAGAAGTAGATATAATACCGTA
GCTGATTATAGACAAGCGCACGTTATAAAAATCACAAACGTTCGGGCTGC
ATTTTGGGGATTTTTAAGACATATGTGGTCACAAACATTTGCCAAATCTG
TATTTCAAATGTATTTTAAACACAACTTTGACTAAGGGCATGCCAGATTC
TATATCTATATCGGAGACCGTGAACGTTGGTTCTGTTTTGATATTAATGT
CACTGAtctgtctgcaaagaattgaactgttttaactTACTACGTTGCAA
TAACTAGATGCATGTCATCTCTAAGGGTATTTTTTGCATAAATCTATTTC
TCCTTCCTGTAGCAAATCGATGTTTGGTCTGATAGTCCACAACATTGTCA
GTTGATGGTCACCAAAGAGCAAAGCATCAAGTTGGACGCATATCTATCCA
AAGAAAATATCCAAAGAAAGATTTTGATCAAAGACGTTCAAAAAGCAATT
GATAAAGAACTAGAGGATAACGATGAAAGAGTCAAGCAGAATGTATACAG
CGCCTTCAGGAGGAGGAGGATATTCAATTACAAGAGATTCAACAGGTTTT
TTGATGTAagtgaaacatctaaacataaagtcaaaaacgtgaagCATCTA
TgcataatacacccctgtctcagtgaccagGTCGCTGTCTTGGCTATAAA
GAAATCTCAAAGACTCACTAGGTTGATAACTTTTAAATCGcttttaaatg
tgattttttgacaGTGTActtaaaacaaataaatttccaatttttgagta
gaaaatttcaatatattttgaccagcGGATCTCCTCATTATCCCACCGAG
GCTTAAACTTATgctttttgtcgacttttttcACCGGGTCACTTATGCGG
GGTGTCATAATATTCCATGGACATAAACTTCAAAACATCTTGTTTCAGTT
AGTAAGATGCATGAATCTGCAGAAACGATGTTTAAATATCGATTTAGCAT
TTATGAGATCCATGTAACATTAAAATAATTGTTTAATTAAAGTTGTGTTT
CAGCTAGTTCACCTTTTGAATGAAACTTGAGTTATTTTGGATCagataaa
atatcaaaatattatttatccagataaatttatttcaaaacttcattgtt
aaaaaaaacagcgaaattttgaaataaatttatgtATTTGCTCTACACAG
TTATTTAGCACTCTTTTAAATGGTGTTCAACTACTATATATTTATTCAGA
TACTTCACGAGTTGAAACGGTTACAATGTCGGTTCAAGAAGAAGATGGAA
ATAATGGAGATAGGAAGATCATATGAAAGAAGACCACTTGTCGTCGTAAA
AGTGAGAACTATGTTACTATCCCATAATGCTTTACTTTACTCGACTTGCT
CTTGAAAATGTGACTTCAATCAATTGATTCAATACTGTCTATTTATACGT
AATAGTCCTGCAGATCCCCATAATTTAAACAGGTGTCTTTATTAATAACA
TCATTATCTGGTGGTATATATTGTTTTTTAAACTGCAATATTCCTGCAAT
GCCTCATGGCTGTAATGATGTAATGCAATGAGAAACTTTATTCTCATGAA
CTGGATTCGAATCTGGCTTCAGTGAATTCTTCGccaaatttttctgaatt
tacTGAAACAAAGACCATATCTTTATCCCGAAGTTAGCAGCAAAAACAAA
TCCATTGATCTTTCCAGATAACAAAGAATGTTTTAAACGAATGTATATCG
AACAAGAAGATCGTTTGGATAGATGGTGGAGTACATTCTCGTGAGTGGAT
TAGTGTGGCTGGTGCTATGTGGATGATAAAAGaggtaaacaaatattttg
atttcaaaactttttcatcAGAGTGAGGGGAAAGACGATGGGAGTAAGAT
ATTTATTAATTTGGTTAAACCGTAATCAGTTTTGGGCGACCATAGtgtag
tggtagagcatccgacTACGATGCACAAGGTtatgggttcaacccccagc
cgggtcataccaaagctTTCCAAAATGGTACGTGATTCCTCTTCTAagaa
aaggatcaagggtaaatggGAGAAAGAATGGCGCCCTCCtataccttcgg
gtagatagctatcgaaagaggagctttCGGGTCGCAACATAAGcaatctt
tttgaattatttcttGCTTGTGTCAATGGGTCAAAACGGCGGGTGTGCAC
AAAAGCTATGATCCCTTATTTGTAACTATTGAGTTAGTCATAATCAATGC
GCGGGTCCTGTATTCAATATATTTCAGTTAGAAAACTTGTCACATAAACA
GAATTTTCTAGGTcacgaagaaaataaaaaacatcatATTGATAAATAAA
GTATTTGAGGAAGTGTTTGGCTTAATGTCGCCGGTATAACATTATTCCTT
GATATTGATATGTTTGTggtcttttgttgaaaatagcATGTTAGAAAACA
ATATCTGTAAACAACTTGATCTAAGTATCATAATTTGATTGAGCTACGTA
TAATTTATCACATAACAAGTTTCTAACCATTCAAGATTCTTTCGAAAGTG
GATGGCCAATAATCGGATTTTGAAAGTAGTACGGCGGTTCATATATTTAC
AAATCACTCTTATTATATATTTGAGTATATGACGTAACTTTTAACATTTC
TTTGCGAAATGCAGGCAGAAATCACCAAAGTGATTTATCAAATCGCTGCC
ATGCCACGCGGAAAGAACGTCTCCTTTACTACGGAAAATTAAATGCgctg
atttaaaattttgaaatttcgaaatgATGTACATTAATTATGGCGGATGC
TTAGTTTCGCATTAAATGTAACGGTCAATATTGGACTCCACGTGGCGCCA
AAGCTaacaaaaatggcttttaggGATATTGATAGAGACAAGGCGACTTA
GAGAAAATTGTAATTTGCGTCACGgctgtttttgttattttctacTCAGT
ATTTAGGAAAAGATGTTACCGAGGGAAGTCCGGGGAAAGTTTAGCATTGT
ATTTGTTCCCTAAGTGTGGCCtttgtttttgataatattgataTCATATC
TATATTTGATAATCTGAGATCCACATTTAGGAATGTTACATAATTAACTA
ATGCCAGGCTAATATTTCAGCTGTCGCTTTTGCCGTGTCCCTGCTTTTTT
TCCTAATTTAATGCAGAAAGATTAATTTAAAGTAATAAGCCGGGTTGCAT
TAAACTGTATATTCTTAGTCCGTTTTTTTCCGTGGAAATTGTCGATTGTA
TTTGATGAAATCGTTTCTCATCTCctgttttaaaagtttcttgAGATTTT
TAGATACTCTTATGCGTATATGTaaacaatctgaaaaaaaatgtgATTAT
CCTGTGAAAACTAAAGAGAGTTAAGCTTTACATATTTTTACTTACAGCTC
TTAATTTCCAAGAAAGCATCGATCCAAAAGTTATTAGAAACACATGTTTT
CTACATCGCGCCTGTCTTCAATCCGGACGGTTATGAATATACGTTCACCG
ATGATCGTTTGTGGAGAAAGACGAGGAGACCAACCAACAAAAAAGGATGC
ATTGGAACGGATGTCAACAGGAATtggaatttcaaatggggacgTAAGTT
TGATATTGCTACGTAAGAACAATGTTCATCTCATGTCCATAAAATACAAT
TatctttttatcgttttttataagaacaaaccatacaAGAGCACAAGCCT
CCAATGACCAAAAAACATCCTAAgtaattttggatgttcttatagaaaaa
gtgtattgtaGGACAGTCAAACCAGCGTTGTCGGGGCTTTCATTTGTTTT
TGGGTTAATTTTGTTCTCACCAGTTGGAAAAGCTAAGCAAAATATTCCAT
GGTGTCCATCTAGCGTCTATGACATTCAAATaaggttatttttcatttca
acttAGCAGCAGGGTCATGCTgccttctaggctatatttccaGTCTTATT
GAAACAATTTTGTCAGAGTTGGTGGATCCTGATATCCTGAATCTAAAGTC
TAATTAGTAAGAGCCCTACATTCCTCAAGTAAGGTTACATCGCATATCAA
TCATatatagtcttaaaatgttgaAGGAAATTCCTTGTTTCTGTTTACTC
AAATATAATGACCTCGTTTAAATAGGAAGTGTTTTAGTTCCATATTTTCT
TTTCCAGTTGACGAGAAAAATAAAGAGCCCTGTGGATTAACTTACCACGG
CGAGAAACCCGAATCGGAAATATGTGTTCAACATTTTGCTCGGTTATTCC
GTTACATTCAACCGAGGCTTCTATCATATTGGACTTTGCATTCTTATGGT
CAATTAGTTTACGTACCATATTCATATACCAGTGAATTTTCACCATATGT
TAGTGATTTGGTGAGTATTTATGTTTTATTAATACAATCTttgtgagcgc
tatcagaatcattaaagagaacaaatGAACTAGGTTCGAGTTTAAACTTA
ATCAATTATATAAGATCGAATCCATTCTAGCGAGTGGCTCTTCCTTCCTG
CGAGGCGGATGTTCACCGAAGCAATTAGTGAACGAAAGGTGGCTCCATTA
TGTGATTGGTTTACGTGGGCTCAAACATAACCTTTCGAACAGAAGACTAC
CACACTAAAACTTAGCCTTGATTTTCAGGTTGTAAgcttttttcctattt
ttgatGTTCCTGGTTTTCCTAAGTAATTTAAACGTTATTTCGGTAGGTGT
CAATTCAAATATTACGTAATGTTAAAACTTTGATGACCCTAGATTTACAA
GTTTCCAATGTTTCCAATGGATTTACATTCCAAAAAACATATATATGAGA
AAATATACTTACAGTTTTTATATCCAGGCTTACTACAACTCAACCACACC
CAAAACCTTAGTTATATGCATAGTAGCTTgctagtctggagatccataag
AATATCATCGTTTGTGCTTTGGCTTTACCTTCAAATAGcagttgaaaaca
cagccaatcagaTTCATTATTCACTCAATGGTCGgactttcttagaaaaa
acgCAACACTGTCAACGCTGAAAAAACGCTATCtatactttttttaaaca
aactaAATCGAGATATGTACTCACAGGTTAGGTTCGTCCTGGACAGAGCT
ACTTAAATATATTCTAGTACGCACACAAAGTCGTAAAATATCAGACTTAG
GCCTAAATGCGAAGTACCTTATTGGCCATTTTTACACCGGCCTTATAAAT
ACCAGCCCCTTTTAAGTCAGCCCTTTTcacgccacagcctaattttgaac
ttacgccaattagggccgttcacaacgccaaaatttgtaaaaatggctac
ttatgcttcaaattagtaaataatgacttaaattgtcatttttcagtagt
aaactgttaaaaattccattgaaaatcactgattttttaatatatgaaat
atttcactgaagttttaagtatggagtaaaacaatgaaTAATTTTCGTCT
TTGAATCATACCtgaaatcctttaaattgagaaataatgatgaaaaatta
aCGCCGTTTTTAGGTTacaattttggccctttttgcaCCGGCTCTTTTAA
CACCGGCCATTATTACGCCAAGAACCTAAAAATAACATCAATAGAGGccg
tgtaaaaagggccgataaggtatttcgatatttcgaCTTTCCCGGTATTT
TTTGTCAAACGATAAACGATTTtcaatgttattatttttatccATTTATA
GATTCAAGCACTATTCGTATTCCGAGAAAAAGCAAAATCACGGAATAATC
AATTCTATGGTTTAGGAACCACGCATGTTTTAGAGAGTAAGATATATCTG
GATTTTATAACAGAAACCATTTTCAATCGACCCACATTACACCCTCATTA
AGAACTAgagctaaaattaaaaaaatcagtgtaaatttggaccaaaatca
TTGGCCATTTCAGACTTTAAGGGNgaattaaaaaaatcagtgtaaatttg
gaccaaaatcaTTGGCCATTTCAGACTTTAAGGGTATTTAATTATTGAGC
AAACTCTTGGATTATTAATCGTACCTACACGGTGCTTGTATGGAACTTTA
ATCCCCTTTGACATCAATGTAAAATGTGTTTGCTATTTAAATCTATTAGT
TTTGGTCTAACCTGTACCcttaatcttcatttttagatggTCTCTTACTA
TTTGGCACATCAATAGATTATATACATGGAGCTCTAAACATTACATACTC
TTTCAACGTTGAGATGAGACCAAGTGAAGCGACTCTCGGTCAAAATCAAA
ACCCAACAgaactttttcttctttcaccGAAATCTATAGTACCAGCATCC
TCCGAAGTTTTTGATGGAATTATTGGAACTGTTGAGCATATTTATGGACG
GACTGAAAACCAAGTATAAAGGATTAATATAGACAGATCCTGATCTGAAA
CCCTGACAATCTCGCACTCAGACTAACCTGCCTCGCTTTTGAATGCTACT
AATGGGCATGAGAAATTCGTTTAATAAATTCCTATCCTGAGAGTTATTTA
GATCATGAAAATTCGAACTCagagactgggttcgagtttgaaaGCTTTAT
AGAGACATGGACATGGTGTTCTTGAAATAGGGCGCCGCACTAATGACAAA
TTCATTTTATGACAGCTCGATGCAAAcaagaatagacgatatcggcttta
ccgaattctccccgaatgactacccatgatgcattgcgcaaaaaaattca
cggacgaattcggggagaattcagaaagccgatatcgtctattcttgTTT
GCATCGAGCTGTCATAAAATGAATTTGTCATTAGTGCGGCGCCCTATTTC
AAGAATATCCCGCTATAATTTGTTGTCATTACCAGTCTTTTCAGTGATGC
GCATAGCTTGCGAATCCAATACACCTTATTAGTGTAAGCTCGTTTGTTTT
CAACCATCCCTTTAGAACTGTCTGTGTGTGTAATCTGTTTTCAGGTTCAA
TTTCACATTCTTTAACGtctcttaagggctctggatctacgcaatttttc
gattttacaccaacttaaatggcaatttctgcatttcaaaaagattaatg
tatgtactttttttatatgtcctgttaaacctacctttttagaatttaaa
aatcgaaaaattgagatgaaaaaattaaatggagAAGAAAACGAagggtt
tttcgaagaagagtatttcacctttcaaagccctaatctcggtaaaaatc
aaacattttgg
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_002079XLOC_002079Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00003720-exon-sc0000031-1491911889:16395..16899TCONS_00003720-exon-sc0000031-1491911889:16395..16899Clytia hemisphaericaexon
TCONS_00003720-exon-sc0000031-1510915933:16395..16899TCONS_00003720-exon-sc0000031-1510915933:16395..16899Clytia hemisphaericaexon
TCONS_00003720-exon-sc0000031-1575043694:16395..16899TCONS_00003720-exon-sc0000031-1575043694:16395..16899Clytia hemisphaericaexon
TCONS_00003720-exon-sc0000031-1491911889:17693..17771TCONS_00003720-exon-sc0000031-1491911889:17693..17771Clytia hemisphaericaexon
TCONS_00003720-exon-sc0000031-1510915933:17693..17771TCONS_00003720-exon-sc0000031-1510915933:17693..17771Clytia hemisphaericaexon
TCONS_00003720-exon-sc0000031-1575043694:17693..17771TCONS_00003720-exon-sc0000031-1575043694:17693..17771Clytia hemisphaericaexon
TCONS_00003720-exon-sc0000031-1491911889:21857..22099TCONS_00003720-exon-sc0000031-1491911889:21857..22099Clytia hemisphaericaexon
TCONS_00003720-exon-sc0000031-1510915933:21857..22099TCONS_00003720-exon-sc0000031-1510915933:21857..22099Clytia hemisphaericaexon
TCONS_00003720-exon-sc0000031-1575043694:21857..22099TCONS_00003720-exon-sc0000031-1575043694:21857..22099Clytia hemisphaericaexon
TCONS_00003720-exon-sc0000031-1491911889:22744..22845TCONS_00003720-exon-sc0000031-1491911889:22744..22845Clytia hemisphaericaexon
TCONS_00003720-exon-sc0000031-1510915933:22744..22845TCONS_00003720-exon-sc0000031-1510915933:22744..22845Clytia hemisphaericaexon
TCONS_00003720-exon-sc0000031-1575043694:22744..22845TCONS_00003720-exon-sc0000031-1575043694:22744..22845Clytia hemisphaericaexon
TCONS_00003720-exon-sc0000031-1491911889:23212..23328TCONS_00003720-exon-sc0000031-1491911889:23212..23328Clytia hemisphaericaexon
TCONS_00003720-exon-sc0000031-1510915933:23212..23328TCONS_00003720-exon-sc0000031-1510915933:23212..23328Clytia hemisphaericaexon
TCONS_00003720-exon-sc0000031-1575043694:23212..23328TCONS_00003720-exon-sc0000031-1575043694:23212..23328Clytia hemisphaericaexon
TCONS_00003720-exon-sc0000031-1491911889:24892..25087TCONS_00003720-exon-sc0000031-1491911889:24892..25087Clytia hemisphaericaexon
TCONS_00003720-exon-sc0000031-1510915933:24892..25087TCONS_00003720-exon-sc0000031-1510915933:24892..25087Clytia hemisphaericaexon
TCONS_00003720-exon-sc0000031-1575043694:24892..25087TCONS_00003720-exon-sc0000031-1575043694:24892..25087Clytia hemisphaericaexon
TCONS_00003720-exon-sc0000031-1491911889:25652..25825TCONS_00003720-exon-sc0000031-1491911889:25652..25825Clytia hemisphaericaexon
TCONS_00003720-exon-sc0000031-1510915933:25652..25825TCONS_00003720-exon-sc0000031-1510915933:25652..25825Clytia hemisphaericaexon
TCONS_00003720-exon-sc0000031-1575043694:25652..25825TCONS_00003720-exon-sc0000031-1575043694:25652..25825Clytia hemisphaericaexon
TCONS_00003720-exon-sc0000031-1491911889:27196..27280TCONS_00003720-exon-sc0000031-1491911889:27196..27280Clytia hemisphaericaexon
TCONS_00003720-exon-sc0000031-1510915933:27196..27280TCONS_00003720-exon-sc0000031-1510915933:27196..27280Clytia hemisphaericaexon
TCONS_00003720-exon-sc0000031-1575043694:27196..27280TCONS_00003720-exon-sc0000031-1575043694:27196..27280Clytia hemisphaericaexon
TCONS_00003720-exon-sc0000031-1491911889:27631..28705TCONS_00003720-exon-sc0000031-1491911889:27631..28705Clytia hemisphaericaexon
TCONS_00003720-exon-sc0000031-1510915933:27631..28705TCONS_00003720-exon-sc0000031-1510915933:27631..28705Clytia hemisphaericaexon
TCONS_00003720-exon-sc0000031-1575043694:27631..28705TCONS_00003720-exon-sc0000031-1575043694:27631..28705Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000031supercontigsc0000031:16395..28705 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.0437072	0.0231246	0.112225	0	0.057002	0.0665507	0.927245	1.64525	2.71159	3.57773	1.48938	0.812617	1.61953	3.07296	2.28068	2.06421	0	0.255405	0	0.621116	0.113347	0.157096	0	3.30731e-07	0	0.0343907	0	1.96546e-07	0.287396	0.146517
Blast
[Close]
BLAST of TCONS_00003720 vs. Swiss-Prot (Human)
Match: CBPA6 (Carboxypeptidase A6 OS=Homo sapiens GN=CPA6 PE=1 SV=2)

HSP 1 Score: 184.496 bits (467), Expect = 2.301e-50
Identity = 111/336 (33.04%), Postives = 179/336 (53.27%), Query Frame = 3 
Query:  441 LVLVSIFFYIQKCDGSHV---KYKGCKVYQIEAKDESQIQKIKRFIKSFPTQIDVWSDSP-------QHCQLMVTKEQSIKLDAYLSKENIQRKILIKDVQKAIDKELEDNDERVKQNVYSAFRRRRIFNYKRFNRFFDILHELKRLQCRFKKKMEIMEIGRSYERRPLVVVKITKNVLNECISNKKIVWIDGGVHSREWISVAGAMWMIKELLISKKA--SIQKLLETHVFYIAPVFNPDGYEYTFTDDRLWRKTRRPTNKKGCIGTDVNRNWNFKWGLDEKNKEPCGLTYHGEKPESEICVQHFARLFRYIQPRLLSYWTLHSYGQLVYVPYSY 1412
            L L  +F  I +   SH+   +Y G KV +   K E +   +K+   S+  ++D+W  S            + + +  S  L A+L + NIQ K+LI+D+QK ++K    + +R ++++         +NY+ ++   +I + +  L       + +  IGRSYE R L ++K+ +         K+ VWID G+H+REWI  A   W +KE L++ K+  +++K+L    FYI PVFN DGY +++T+DR WRKTR   ++  C G D NRNW  KW  +  +  PC  TY G  PESE  V+  A   R  +  + +Y + H+Y Q++  PYSY
Sbjct:   15 LPLCWLFLKILQPGHSHLYNNRYAGDKVIRFIPKTEEEAYALKKI--SYQLKVDLWQPSSISYVSEGTVTDVHIPQNGSRALLAFLQEANIQYKVLIEDLQKTLEKGSSLHTQRNRRSLSG-------YNYEVYHSLEEIQNWMHHLNKTHSGLIHMFSIGRSYEGRSLFILKLGRRS-----RLKRAVWIDCGIHAREWIGPAFCQWFVKEALLTYKSDPAMRKMLNHLYFYIMPVFNVDGYHFSWTNDRFWRKTRSRNSRFRCRGVDANRNWKVKWCDEGASMHPCDDTYCGPFPESEPEVKAVANFLRKHRKHIRAYLSFHAYAQMLLYPYSY 336
The following BLAST results are available for this feature:
BLAST of TCONS_00003720 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
CBPA62.301e-5033.04Carboxypeptidase A6 OS=Homo sapiens GN=CPA6 PE=1 S... [more]
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