TCONS_00003613 (transcript) - C. hemisphaerica

Overview
NameTCONS_00003613
Unique NameTCONS_00003613
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2610

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00003613 ID=TCONS_00003613|Name=TCONS_00003613|organism=Clytia hemisphaerica|type=transcript|length=2610bp
CGgacaagaaagaaaagaaagctaaatcgaaagtgaaagtgaaagtgaag
aaCGATCGTCAGACAACTAAAAGTCATCCATCAAAGCCACCCAAGGGAAA
CGACGAAACAGCGAACAATGTTGTTTCTAATGTTGTGTCTTCTTCTGCAG
CACCAAAAAAAAGAACGATGGTACCGATGACGAAAGAGGAATACGAAAAA
CAACAAAGTGTTGTCAGGAGAGTTTACGATCCAGAGACTGGCAGAAATAG
GCTGATCAAAGGCGATGGTGAAGTGTTGGAGGAGATTGTCAGCAAAGCAA
GACATAAAGAAATCAATAAGaTGTCGACGAAGAATGACGGAGAATACTTT
GCCACGAGCATCGGTCTAAACCGTAAATGAAAGATCTTGTTACAAATTCA
CAATATGTTGGCAATAACCGAGTCATACGAACGGAAAAGACTTGTTGTga
taaattttggtttttaaacaACGGAAAAGTATACTTGACAAACCGACAAA
AACATTGATCCTGAGAATTGGTGTTAAATGATCGATCTCACCTTTTTAAA
CGTTGTTAGCATTTTACAAATCAATTTATACAAACTTTTGGTAATCATGG
CGCAAGTGTTGTTTTGAGATAcagttttttcgtttttcgggCGAGGAGTA
TATTTGCAATCATCTGATGCACTGAAAAGACATTATTTCCCTACACTTGG
GAGCTCGAATCTGAATAAGCGAATAACGGAATCAACAAGAACGAGAGTTA
CATTACATTTATTGAGAAAACATTCGTGGTATCCAATTTATATTTATTGG
AACTGATTAAAGGTATTGTTGCATAGAGTTGCTATAGAAATATTTGacta
aacaaaatggcagacgtTGATCGCAATAACAATATTAGCGACAGTGAAGG
AGAGCACATGAAGAAATCACGCTTCTCCGCTGTATTGAATTTCTTCAATG
ATATTATTGGGAAAACAAGTTCAATACCGTATGGTCTCGATCATACAAAT
GGCCCCAACAGACGTTTCTCAGCGACGTTGCGACGTAAAAAGAGACAAAC
CTCAGCACCTGATATTTCAATCTCGGTCACATCAGACGGTGAAAATAATA
GACATCGAAAATTGGCGCCAAAAAATTCGTCCCCAGCCTCCTTAAATTTA
CCGAGGGCGCGAATGCAACGCCCTGCTTTGTCAACCAACTCTCTTAGTCA
AGCGGATGTTGCAGAAGCGTGGTTACGCCCAACACGCCATCGAAGCTATC
GATCAAACGGGGGCATCAATTATCATCAAAGTGATCTTAGTCTGGATAGC
TTCGCCTCATCTACGTCTAGTCGATTGAATTTAACGGGAGGTACACTCGA
TCGTCATACCAGAAGCAGATCAAAGAATCTAACCGTACGTTTTAGTATAG
ATGATCTTCATAAGAAAGAGCAAGCTACCATGAAAAGATCGTTTAGTAAC
TCGGCAGACTTACGGAAACCGAATCAGGTTCAAGTAGATGATGCGCTCGC
CGCGCTTAAAAATCTTGATGATAATTTAAAGACTCAGAGTGAAGGTAACT
TGATACATGTAGGAGCTTTTGTTTGTAGTGTCGAGCGTTCGAGAAGTCAA
GACAAGCTATCCAACGGTGACGAAGACGTCTTCATTGATGAACAAAAATC
GAATCAAATCGGGAAACAAGATGATATGAAATCGGGAAATCTTGAAAGCA
GTATGCCAGCTATCACTGTACAGATTGATCAAGGAAAGATTTTTGGTAGA
CAGAAATCTCGTCGAAGAAGTAGCTCCTCCAGTTCAAGAGAATCCAAATC
TTCAAGTAGGAACACCTCCAAAACGTACCGAAATATCAGGACTAGAAGCT
TATCTAACGAAGTCAAAAATGGcggagaaaatgaaaaaggaaactTATCT
AAGACCAGACGATATAGTTCGTTAGATCTTGAGTTGAATAAGAATGTAAT
CAAAAGTAAGACTAGCCGCTTGTCTATACCGAGTGGTTCAGAAACTCCGG
ACCGAGAGGAGCCAATAACACGAAAATCGTCTGAACTATTACACGATTGC
TTTGATACAAGTTTCTGGGAAGATGCATCGATCGTAAGCGAGGCTAAGAT
TCGAGATATTTCTGAAAACGAAGCTCGTCAAGTTTTGTCAAAGATTGATT
GTCACGAGAAAAGCGATAAACATATGTCGAAAGAAATCACTTGCAATGTT
CGTGATAAGATTCGGGCGTATACAGGGCGTAATTTTAAGGTCATCGTGAA
CACCCTTATTGGTGGTTTGGTCCGCCCTTCCACCCATGATACGGTGGGTG
TTACAGTTAAAGGAATGACTGATTCGAAAAATGATCGTTTTGTAGTGACA
GCTTTTGAGAAAGACGATATGTTTATTTCGGTGACgtgtgttttgatgaa
aattcaaaatggtaccaAATTTGTGACAAATATTGAAGAGAAAGCACTGG
GAAGtgctaaataatttttttatgtgaCCATATTATTATTGGATATCTTG
ATTTAGTATGGATCTTAGTATAGAACgtatttttatttgattcaAATCGA
CTAAATAGTTGGCCAGTAGCGTGGTGGTAAAGGGGGCAGCGCCCAatttt
tcgggggggg
Run BLAST on NCBI

transcript from alignment at sc0000030:321035..330939-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00003613 ID=TCONS_00003613|Name=TCONS_00003613|organism=Clytia hemisphaerica|type=transcript|length=9905bp|location=Sequence derived from alignment at sc0000030:321035..330939- (Clytia hemisphaerica)
CGGACAAGAAAGAAAAGAAAGCTAAATCGAAAGTGAAAGTGAAAGTGAAG
AACGATCGTCAGACAACTAAAAGTCATCCATCAAAGCCACCCAAGGGAAA
CGACGAAACAGCGAACAATGTTGTTTCTAATGTTGTGTCTTCTTCTGCAG
CACCAAAAAAAAGGTACGTGGTTGGTTGCAGGCTTTTAGATAATCTCTGA
TCGAAGTTTATCTGAAAGTGGTTCTCTGACCACAACTACCTTAAGGGAAG
AAATCTTCGTGGAATTTAATTTCGCGGTTAAGAGGAATTTTTTTTTCAAA
TTTGGCTTATTTTGCCCCAAAATTTTTAAATCAAGAGAATATTCTTGTTT
CGTGGAATTTGATTTCACGGATTTGTCAAAAAACTGCGAAATTTTCTTCC
CTGGTGTTTATAAAGCAACCATGTTTGAATAACGGTTATGGAGACTACTG
TGTCATCTAAAGAGATAAATCAGTGTCGGTATGGATTTTGCAATTAATAA
AAAAGTTACAGTTTATTGTTTTCTTAACTACAGAACGATGGTACCGATGA
CGAAAGAGGAATACGAAAAACAACAAAGTGTTGTCAGGAGAGTTTACGAT
CCAGAGACTGGCAGAAATAGGTATTAAATGAGGTGCCAATCTCTTTTTTA
TTCCCATTCTCATTTTGGAATTCAAGCAAAAACACTAATTATCAACCTTT
AAAGTGTGGAGGACTGGGTTCGTGTTAAATTGACGTTAAAAAGCAGTTCT
GACGCCTTGTAAATTTATTAAGAGACCCTTCAAAAGGCGACCGCGTCGTT
AAGGAAATATAGGTGTATTTAGCCGTCAGCTCTGGCTCAGAGTCGATATT
CATACGTGGAATGCTCGCTGTTAGCACTTTTAGGGAAGTCAGTTGTCTTC
ACGGGGTCCACGGCCATCAGGCTTGGGTATTTATAAATGAACTTAGCAAA
AAAATAGGAAAGAGCAGGGATTTGAACCGGAAACTGCACATCCTTCAGGG
AAAACAATTATTAAAAGAAATATATCTATAGAGGTCTGTNTAGGAAAGAG
CAGGGATTTGAATCGGAAACTGCGCATCCTTCAGGGAAAAAAATTCTTAA
AAAAGATATATCTATAGAGGTCTGTGTATCAGACTACCTGGTTGATCCCT
TAGATCAGTCTCTACTCGTGCCATTCCTCTGAGACTTGTTTTGCTTTAGA
GCACTTTGTGAAAAGAGATAACCCTCATGTTTTACACTCTTATTTTCTTT
CATCTTCAGGCTGATCAAAGGCGATGGTGAAGTGTTGGAGGAGATTGTCA
GCAAAGCAAGACATAAAGAAATCAATAAGGTACCTGCTATAATGTTGTTA
AACTACAATACTGGCCAAAAGTAAATGGAATCCTAATTATTCAACTGTTT
TACTGGCTCCTCTTCTCCCCTACTACAATCTTGCAGAGTCAAGTTGGACT
GAAATTCAACATTGTATAAGGGGGTAAAGGAGGGAACTTGTTTTTTCAAA
TGATAGTCGATGGAATATCGGATTTGTTTGTTTATGGTACAATGATACAC
GTGTTATACAGTAAGATAATAATACATGTGATGTGATAGTGCGTAATGCA
GTAATATTGCAATACATGTAATGTAATAGTGCGTAATACAGTAACATAAT
AATACATGTAATTTGATAATGCGTAATACATTGATATAACATGTAATGTA
TTAGCATGATCACCTACAATCCTTTCCTACCATATCAATCATGCTGGACC
ATGTGTTAACCCTCAAGGTACTTCAAATTCCCTCAAATGCTGAATGGTGA
TGAATAGGAAGAAAAATAGAAGAATAACGAATCCTGTTTTAAAAGTCTTT
ATTGAAATGGCTTTGTTTACTGGATTGAAACGTCCTACTTTGGGTAGTGG
ATACTGTGTAGTGAGGTCTGGTAGCACATAAAAACGTAAGAATACTTCAG
ATAAATCTGCCAAATTTCATGCTTTTATCACCATCTGAAGTATTTTTGTG
CCAACAGACCTCACTATTAGATTGCTGACAATTTTCCTTACACTTAACGA
TCGAAAACAAGCTCTCGGTTTTTAATCTGTTTCCCGATAAACAGACAATC
GGAATCGTGAATAGGAATTATCACTCTGATAAGAAAAAATATGTTTTGAT
TAGTTTCTAAGGATTCAAGGTGAAAATTTCATGATAAGTTTTTAAGTTTT
TTTTATTGTCAGTTAAATCAAAATATTGGACTCGTAGCAGGAGTAGAAAT
GAGGACTTAATTTCTACCATGGTTACCGTGTTTGCCGATTGACTTCATCA
TTAAAAAATCTTTTTTCTCTATTGATAATAAAAACAGTGGGTGGATTGCT
GAGTATCTCTAGGCTTTCATGTTTAGATCTTTCCTATCATCTACCAAATA
TTTGGGGGATGATAAAATGTTCGTCTAAGCATTCACAGAGCTTGAGTACA
CCCCTGTCTCAAAGCCCCGGTGGAACTTTTTTCTTCAGTGGAGATATAAA
TCCCTATTGAAATCCCAATGGGGATAAAAGTTTTATTGATCAAAGGTTAA
AAAATCCAGTGAGGATGGTTTTGGAGCGCAATTTTTAGACATTGATTTTT
GAGAAGGGATGAAATCAAAGTCAATTTACCATTTGGTAGGAAATTCCAGG
GTATTTTCTCACCGGGGAACAAATCTTCCAGTGGGGCTGGGGTCCCAGTG
GGTTTATGACACAGGGGTGTTTGAGTGAACCTTTCAAACACATTGGAAAG
CTAAGAACTTCGAAGTATTATTATCATCCATTGTTAACCAGTTACATTTC
GAAGCGGGCTACACGGCTTTTTGCACAACGCAATTGGTTCTTTTCGCATG
ACGACGGGCCTGCACTGTCCAGAGTTGCCCGTCGTTAGGAAAATTCCTTG
TAACGTCACTTTTTCAAAGAAAAATGAACAATGCGTTGACATCATTTCAT
TTATTTCTGACGTCAGAAATTATAAAAAATTTTGATCTCTTTTCGCTTGT
TTTTTTCGCTTTATTTCACAACTGCTACCACCGCCCATCAAGACTTTTCC
TAATGGGAGGAAAGGAGATTGCATCGCAAGAAGGTACCACACAAGGTGAC
CCTACAGCAATGCCAGCATATGCAATTGGATTAATGCCACTGCTTGAGAT
CCTCCAAGAAGATTTGCTGACACAAGGAGTTAAAAATGCTGCATATGCTG
ACGACCTCGCTGGTACTGGGAAGCTTCAAGCCCTGAAGAAGTGGTGGGAT
GACGTCAATGACTTAGGACCTCTCCTAGGTTACAACCCAAAAGCTTCCAA
GTCGTATTTGATAGTGAAGGAGGATAAGCTCGAAGAAGCAAAGGTGCTAT
TCAAAGACAGTGGAATCAACATCACGGTTGATGGACACAAATATCTTGGT
GGTTTCATTGGTCAAGAGGGTGGCCAACAGGAATATGTAAAGAAATTGAT
AGAAAAATGGCAAGCTGAGCTCCAAACACTGAGTGATATNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNACAGCCCTCACTAACCGGTCATT
ATTGTATTAAAGAACCTTTTAGCTCCAAGATATTTACCTTGAACAGTGAA
GTGCAGGATACAGTTGGCTCTCTCTAATTCGATCTTCAATGAATTTTCTT
CGAACTAGAGAAATATTCAAATTACAGAGATTTTTTTATGCTGCTTTCCA
GCTGAGGGGATCAATATTTTAGTTCGAATATATTGATAATATTGTTCATT
TGGACGTTTTCAGAATTTAAAGTTCGATTTCAACACTTCCGGATCCTATG
ATCTTAAGGTCCAAAGTGTTACTCTCGGTCGCCTAATAAACGAGGGGGGG
GTCGGGATAAACGGAGGACCTAATTACCGGGGCCCGTTTATTAGGCATCT
GAGAAGTAAATTAGAGCACTTAAAAACCATTTGTTGTGTTTTAGATTTCG
CAGGTACTTCCCCTTTTTTATCAAATATTATGATTTTCATTCTAAGCGTT
TCTGTTTTTCAGCTCTAATTTTGTTGTTGTTTTTAGATGTCGACGAAGAA
TGACGGAGAATACTTTGCCACGAGCATCGGTCTAAACCGTAAATGAAAGA
TCTTGTTACAAATTCACAATATGTTGGCAATAACCGGTAAGTCATCATTG
GGTTAGTGCCACATATTTCTGTAGAGTCTGAAGATGCTAGTTGGTATATT
GTTGCTATTGTTTTTGAATACCTGCGAAGCTTCTTATTGGTCAAGCGCTG
AAATTCTATTGTAATGTCACGTCACCTAGGTAGGATTTCCTACCTAACCA
CGGCACACTTTTTAGTCAAAGCGCGCTAGATGGCTCCTTCGAGCTTTACA
GAAATATGTGGTTAGTGCTATCATTTTTCTTTGCATCAGTCAGGCTTATA
GGGCACACGTGGGAGCTAAACATGAAATAAAAGTTCGAAACCCTTAATTT
GGTCCTATTTTTTTCAGTACTAGTGAACATGCTGCATGTTAAGTATCAAA
AGTTGACATTTCACCCTGCTTCTCTAACAGTTAGCTGTAGAACATCACCA
GACTTTAGAATATGCAACAGTCGTAAACAAATACGGGCTTGTAAACTAAT
AAGGAAAAATAAAATACACCGGTTAAAGCAGGTTACTACTATTGAGGCCT
TGTTAAATATGTCCAAAATNTACTTTAGAATATGCAATAGTCGTAAACAA
GTTACGTAACAATCTAATCTACTAATTGAAAAATTATTAGCCCTAAATTT
GGCAATGCTTGAATTGCTATCAACAAAAATATGATATACAGTTGTGGCTC
TCTCTAATTCGAACTTCAAGGGACTAAGACTTTTCTTCCCCGGCTGGCAC
ACAACGTTGTTTCAACGTTTTTATAACGTTATTTTCGCTTTGCTTGCCAG
CACCTTACCATTTTCAGGATCTAAAAAGCCAATAGTTAACTAAAAATGTT
CAGTTGCCATAATTTTGTAGCAACTCCCAACTCACCAACTAGAAAATTAC
CTAAATCCCAACAGAATAAATAAAGCTTTATGTATGATATGGACGTTGTG
AACGTCAGAAAAACGTCGAAACAACGTTGTGTGCCAGCTGGGTCGAATTA
GAAAATGATTCGAATTATGGAGAGCGTTTTACACCACGGGGGCAAATACT
TTAGTTTGAATTACAGAAAGATTCGAATTATAGAGGTTCGAATAAGCGAG
AGTCTACTTTAACTAAAAACATAAGGACTTGGAAGTTTTATGCCAGTCTT
GGTGGATTAAAAAAACTTATGTTAGAGATTTTCCTACAATAAATATTTTC
GATTAAGTAGAGAGCGATTAGAGAGAATTCTTATCCACCGAAAGAGCGGA
TTATTTGACAGACATAGATATTTCTCATTAGCAATCTCTTTCCAAGGGAT
TATCCTTGTAATTGATAAAGAAGCTTTGTTAAAGATTGATACCATATAAA
CGCTTTAAGAATGGTGTTTTGTTTTCATATTATCATCGATATTCTTAAGA
TTTTTAGAGAATATCATCCTGAAATATTCTAAGGCTGGAGATTCAAATTA
AGCCTAGATTTAACATGTAAAATCTGTCTCAATATAATTTGCAGCGGAGA
CAAAAAAAGGATGTATAACTTTTGATAGAATTCGAATAAAGCTTCGATGG
CCAAAATGTTAAGAGCAAGTTGAGTATATTTTGAGGCTTGCGTACTCTAA
AATGGCCGATTTCTTAGGAAAATGGACGAAGCTATTCACAAAATGGAGAT
GATAAGAACATGTCAAGAACATTTTTTGGGTTAAATTCAAAAAAAGAACT
TCTGAAGGCTTCTTATAAAAAAAGTGTAGCTCTCATATGTCATAAAAAAG
TGATCAAAAACTCCCTGCTAATTCCATTTCTATTTATCGTTTAACCTTAT
TTAAATGAGTAATTACATACTTTTTTTCTCCCTTGATTTAATTATTCAAA
TTTTAATATATGAAATTTAACCAATAGTGCTAATTAAACCATATTAAATC
TTTATCAATTACTTCTCACTGATATGTTTAATACATACCTATTTATTTTC
CTTTAAAACATTTAGAGTCATACGAACGGAAAAGACTTGTTGTGATAAAT
TTTGGTTTTTAAACAACGGAAAAGTATACTTGACAAACCGACAAAAACAT
TGATCCTGAGAATTGGTGTTAAATGATCGATCTCACCTTTTTAAACGTTG
TTAGCATTTTACAAATCAATTTATACAAACTTTTGGTAATCATGGCGCAA
GTGTTGTTTTGAGATACAGTTTTTTCGTTTTTCGGGCGAGGAGTATATTT
GCAATCATCTGATGCACTGAAAAGACATTATTTCCCTACACTTGGGAGCT
CGAATCTGAATAAGCGAATAACGGAATCAACAAGAACGAGAGTTACATTA
CATTTATTGAGAAAACATTCGTGGTATCCAATTTATATTTATTGGAACTG
ATTAAAGGTATTGTTGCATAGAGTTGCTATAGAAATATTTGACTAAACAA
AATGGCAGACGTTGATCGCAATAACAATATTAGCGACAGTGAAGGAGAGC
ACATGAAGAAATCACGCTTCTCCGCTGTATTGAATTTCTTCAATGATATT
ATTGGGAAAACAAGTTCAATACCGTATGGTCTCGATCATACAAATGGCCC
CAACAGACGTTTCTCAGCGACGTTGCGACGTAAAAAGAGACAAACCTCAG
CACCTGATATTTCAATCTCGGTCACATCAGACGGTGAAAATAATAGACAT
CGAAAATTGGCGCCAAAAAATTCGTCCCCAGCCTCCTTAAATTTACCGAG
GGCGCGAATGCAACGCCCTGCTTTGTCAACCAACTCTCTTAGTCAAGCGG
ATGTTGCAGAAGCGTGGTTACGCCCAACACGCCATCGAAGCTATCGATCA
AACGGGGGCATCAATTATCATCAAAGTGATCTTAGTCTGGATAGCTTCGC
CTCATCTACGTCTAGTCGATTGAATTTAACGGGAGGTACACTCGATCGTC
ATACCAGAAGCAGATCAAAGAATCTAACCGTACGTTTTAGTATAGATGAT
CTTCATAAGAAAGAGCAAGCTACCATGAAAAGATCGTTTAGTAACTCGGC
AGACTTACGGAAACCGAATCAGGTTCAAGTAGATGATGCGCTCGCCGCGC
TTAAAAATCTTGATGATAATTTAAAGACTCAGAGTGAAGGTAACTTGATA
CATGTAGGAGCTTTTGTTTGTAGTGTCGAGCGTTCGAGAAGTCAAGACAA
GCTATCCAACGGTGACGAAGACGTCTTCATTGATGAACAAAAATCGAATC
AAATCGGGAAACAAGATGATATGAAATCGGGAAATCTTGAAAGCAGTATG
CCAGCTATCACTGTACAGATTGATCAAGGAAAGATTTTTGGTAGACAGAA
ATCTCGTCGAAGAAGTAGCTCCTCCAGTTCAAGAGAATCCAAATCTTCAA
GTAGGAACACCTCCAAAACGTACCGAAATATCAGGACTAGAAGCTTATCT
AACGAAGTCAAAAATGGCGGAGAAAATGAAAAAGGAAACTTATCTAAGAC
CAGACGATATAGTTCGTTAGATCTTGAGTTGAATAAGAATGTAATCAAAA
GTAAGACTAGCCGCTTGTCTATACCGAGTGGTTCAGAAACTCCGGACCGA
GAGGAGCCAATAACACGAAAATCGTCTGAACTATTACACGATTGCTTTGA
TACAAGTTTCTGGGAAGATGCATCGATCGTAAGCGAGGCTAAGATTCGAG
ATATTTCTGAAAACGAAGCTCGTCAAGTTTTGTCAAAGATTGATTGTCAC
GAGAAAAGCGATAAACATATGTCGAAAGAAATCACTTGCAATGTTCGTGA
TAAGATTCGGGCGTATACAGGGCGTAATTTTAAGGTCATCGTGAACACCC
TTATTGGTGGTTTGGTCCGCCCTTCCACCCATGATACGGTGGGTGTTACA
GTTAAAGGAATGACTGATTCGAAAAATGATCGTTTTGTAGTGACAGCTTT
TGAGAAAGACGATATGTTTATTTCGGTGACGTGTGTTTTGATGAAAATTC
AAAATGGTACCAAATTTGTGACAAATATTGAAGAGAAAGCACTGGGAAGT
GCTAAATAATTTTTTTATGTGACCATATTATTATTGGATATCTTGATTTA
GTATGGATCTTAGTATAGAACGTATTTTTATTTGATTCAAATCGACTAAA
TAGTTGGCCAGTAGCGTGGTGGTAAAGGGGGCAGCGCCCAATTTTTCGGG
GGGGG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_002014XLOC_002014Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00003613-exon-sc0000030-1575043694:330777..330939TCONS_00003613-exon-sc0000030-1575043694:330777..330939Clytia hemisphaericaexon
TCONS_00003613-exon-sc0000030-1575043694:330320..330406TCONS_00003613-exon-sc0000030-1575043694:330320..330406Clytia hemisphaericaexon
TCONS_00003613-exon-sc0000030-1575043694:329611..329680TCONS_00003613-exon-sc0000030-1575043694:329611..329680Clytia hemisphaericaexon
TCONS_00003613-exon-sc0000030-1575043694:325154..325253TCONS_00003613-exon-sc0000030-1575043694:325154..325253Clytia hemisphaericaexon
TCONS_00003613-exon-sc0000030-1575043694:321035..323224TCONS_00003613-exon-sc0000030-1575043694:321035..323224Clytia hemisphaericaexon
TCONS_00003613-exon-sc0000030-1510915933:330777..330939TCONS_00003613-exon-sc0000030-1510915933:330777..330939Clytia hemisphaericaexon
TCONS_00003613-exon-sc0000030-1510915933:330320..330406TCONS_00003613-exon-sc0000030-1510915933:330320..330406Clytia hemisphaericaexon
TCONS_00003613-exon-sc0000030-1510915933:329611..329680TCONS_00003613-exon-sc0000030-1510915933:329611..329680Clytia hemisphaericaexon
TCONS_00003613-exon-sc0000030-1510915933:325154..325253TCONS_00003613-exon-sc0000030-1510915933:325154..325253Clytia hemisphaericaexon
TCONS_00003613-exon-sc0000030-1510915933:321035..323224TCONS_00003613-exon-sc0000030-1510915933:321035..323224Clytia hemisphaericaexon
TCONS_00003613-exon-sc0000030-1491911889:330777..330939TCONS_00003613-exon-sc0000030-1491911889:330777..330939Clytia hemisphaericaexon
TCONS_00003613-exon-sc0000030-1491911889:330320..330406TCONS_00003613-exon-sc0000030-1491911889:330320..330406Clytia hemisphaericaexon
TCONS_00003613-exon-sc0000030-1491911889:329611..329680TCONS_00003613-exon-sc0000030-1491911889:329611..329680Clytia hemisphaericaexon
TCONS_00003613-exon-sc0000030-1491911889:325154..325253TCONS_00003613-exon-sc0000030-1491911889:325154..325253Clytia hemisphaericaexon
TCONS_00003613-exon-sc0000030-1491911889:321035..323224TCONS_00003613-exon-sc0000030-1491911889:321035..323224Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000030supercontigsc0000030:321035..330939 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
2.32924	2.33432	1.05278	1.22349	2.83382	2.54797	1.5287	2.81861	1.2969	0.938799	1.3365	1.36967	1.9348	1.49868	1.17777	1.47729	1.23972	1.88103	5.38507	5.45335	0.941447	0.636521	0.955793	1.52603	0.373772	0.450306	1.46098	1.14603	0.976873	1.0774
Blast
[Close]
BLAST of TCONS_00003613 vs. Swiss-Prot (Human)
Match: AR6P4 (ADP-ribosylation factor-like protein 6-interacting protein 4 OS=Homo sapiens GN=ARL6IP4 PE=1 SV=2)

HSP 1 Score: 95.9005 bits (237), Expect = 7.971e-21
Identity = 43/68 (63.24%), Postives = 53/68 (77.94%), Query Frame = 3 
Query:  165 TMVPMTKEEYEKQQSVVRRVYDPETGRNRLIKGDGEVLEEIVSKARHKEINKMSTKNDGEYFATSIGL 368
             M PMTKEE++ +QS++R+V DPETGR RLIKGDGEVLEEIV+K RH+EINK +T+ D   F    GL
Sbjct:  352 AMKPMTKEEWDARQSIIRKVVDPETGRTRLIKGDGEVLEEIVTKERHREINKQATRGDCLAFQMRAGL 419
The following BLAST results are available for this feature:
BLAST of TCONS_00003613 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
AR6P47.971e-2163.24ADP-ribosylation factor-like protein 6-interacting... [more]
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