TCONS_00003601 (transcript) - C. hemisphaerica

Overview
NameTCONS_00003601
Unique NameTCONS_00003601
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1983

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00003601 ID=TCONS_00003601|Name=TCONS_00003601|organism=Clytia hemisphaerica|type=transcript|length=1983bp
CTAAGACAACGCTGACCAGTCAGAGGACGCCAGAAGTAGATAACCATAAA
AGAATACCATGTATCCAACAGAAACTAAAGATTTATTCGTTCCAAGCAAT
GAAGACATTTGTAAAGTTCTATCCCAAGGGTTGCCAAAGTACTTCAAAGA
AGTTTCAGTTAATGAAGTTGATTGTCCAAATTTGACGGAGAAACCATGGG
GACTAGCTGCCAAAGGAATCTGTGGCAGTCCAAAGAATTTAGATGTTGGT
GGACCACCATATCTTGTTCCTACAGTTCAAAGAGACAAGATCTACAAATT
TGAAGAACTTGCAAAATTGACAGGAATCAAAGATACATTTTTTATTGGAG
CTGGGGCTGGCCCATGTCATGTTGTTGGGGTTAATTCAGAGATGATGGCA
AATTTGAAGACGGGGGATTCTGAGAATGTTCAAACTTATGTTGCAACAGT
CAGAGATGATAATTCATGTAACTTGAGACAAATACaagcaaaagattttt
gtttaCTTGGGAATTTTTTAGCCTCTGAAGGCAAACAaggaaagGTCATA
AAAATCAATGTTAAAACACGCTTATCGGAAGAAAACTTTCCACTAGCTAT
TAGGAAAGTTTTAACTGAGTATTCCCCGGACAAGATAATAGGGCTTGGTG
GTGTTTTTGTTATCAAAAATGGTAAAGCTAAGCTACATATCATGCCAGAC
TTCAGCTGCACACCATTGGAAACTGACGAAGCTGTGAATAATTGGCTGAC
GTTCAATGTTTCAAGTTCACCTCTTGTCTGTTTGAGCGTCTTTTATAACG
TTGATCAGGGATATGATTTACGTATTGAGCACACGCATTGTTTCAGCCAC
CATGGCGAAGGAGGCCATTATCATTACGACACAACTCCTGAAGAAGTTGA
ATATGAAGCTTATTTTGTAGTAGCCGAACAATTACTACGTGTGGACAGGC
CTTTAAATACTCACGCTGTTGGGCgtgattgaaatattttgttatgcttc
attaggcgagaccaatttaatttgttgttctacgggcctgaccgacccta
tttttgctaaattcaaaaaaatgataatattgaatttccactatgTACag
tatattttacacactagttatttgtaagaattaaatttgaataaagctga
aaattaattcaagaaattgaaaaatttagaaaatcaagcattttataaaa
acagtgaattttttaaccagataatttttcgaaaacattttcggtacttt
aaCAACTCTGATAaatgaaagatttatttttattttaccgaccgaccgac
ccaaattttgctaacgatctgcccatagaacaacaaattaaattggtctc
gcctttagtcaaaaatatttcccgcttttcatcaataAATTCCTTTTTCA
ATGCAGTACAGTAGTTAAAGTAAAATTGCTAAATGTGGATGGACCAAGAA
accgaatttttttcattattgaCTGTTGGTGGTTATTGATGAAATTCGtg
gtttttttaaaaaacattataTTTTCAAACACTACTCTAATTTGGTAGTA
GGTTTGGATATCAGAGATTTTCACTTGTAGTTGTTGCTAGCCAACTATCC
CACCGGAATGGAGACCCTTATACTTGGAGATATTTCACATGGAGACTTTG
ATgaattttacttttcaaaagTGAGGATTTTTTTGGGAACTAATTGTGAT
TTAGTGATAATTAATTCATGATaagcaccactggagagtcttctgagaac
ttttaaaattttccacccaatacgtcacttaaacaatagaaaaagtgacg
tattgggtggaacaaaaacagaaaagttgcataatttcgtgaagtcatca
caatggtgcatatcatgaatagtagAGAACATATTTTACACTAGCAATGG
ATACAATTGAATGTTGCATTGATAACTGGATGATATGAATATACTGTTTC
TAGTCACTTTAATTTTTATTGAATTACTCCTTT
Run BLAST on NCBI

transcript from alignment at sc0000030:167163..182134-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00003601 ID=TCONS_00003601|Name=TCONS_00003601|organism=Clytia hemisphaerica|type=transcript|length=14972bp|location=Sequence derived from alignment at sc0000030:167163..182134- (Clytia hemisphaerica)
CTAAGACAACGCTGACCAGTCAGAGGACGCCAGAAGTAGATAACCATAAA
AGAATACCATGTATCCAACAGAAACTAAAGATTTATTCGTTCCAAGCAAT
GAAGACATTTGTAAAGGTATAATGTTTCAATTATTTCGAATAACTCTCGT
TTGACATATCACATGTCAGCAGAAACAGCCAACCCGGGGGGGGGGGTACT
TAGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNCCAATCAGAATTTGTTAGCGAGCGGTATTCATCTAATCGGAATCGCG
CAACACGAAAGCGAAAGTGAAAGTAAAGGCGGAAATATATTCTTTTTTCT
ACATGATTTGCATATATTAGAACAGAAAGAAACGCCAATTTGTCAAAGAT
TTGTTTAAAACCACCTTATATTTTGTTGAGTATTGCCTAAATTTATCGAA
AAAATATGCTTTTCAACATTAAAATCTTAAAATCTCTTTTATTGTTAAGT
ATCCCCGGGGCGCTCAACGGCGAAAGAAAATAAGCGGGCGGAACCGCCCT
CATAGTTTAATCCCAGGATTGAAAAAACCTGGAGAAAACCTTTTCCGTAC
ATATAATGTAGCTAAGGAATTTTAAAACACGGCATTTAAAGTGAAACAAG
ATGAGGGAGAAGTAGCGATTGGAGGTTTTTGTAATTAAACAGCATGACAA
AGGTTTGTTATATTTTAGCATAACAAAGACAAACTCAGGAGGTAAGGTAA
ATTGCATTTTGACTGCTTTTAACTGTTTTNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTAGGCA
AATGGAGGGTACGGTATGTGCCGCCCTTAAGGGTACCTTATTTGGACTTC
CAAAGTCCCGCTAAGGGTCAGAAAAATCAGAAAATCAAATTTCAGTCCCA
CTAAGGGTCAGAAAATTTCAACTTTTTACCCCCTGGAAGATCGAAATTTG
GTCAAAATTGGTCAAATTAGTCTCTATTTCTATTTCTATTTGGTTGAGTT
GCAGGAGGCTTTAGAGGCCTATTCTCGCAACTATAGACGCTTACTAATGA
GCGTCCCGTCAGCACCTTGAACTGACTACCCAATTCCCCTCACATGGCAT
GGGATGACCCGGGCGAAGGAACGTTCACTTGCCAAGTGAACTGCCGTGAG
TGGGAATCGAACCGTGGTCACCTGCACAGAAGCCAAGGTCGACTACCACT
ATACTACGGCACCCTAGTCCCGCCAAGCAAGGGTCGTAAAATTCAAAACA
TTTTCCTTGGTTTTCTCTTTTTTAGTCCCAGTAAGGGTCCAAAGTTCGAA
AGTCGGGCGGCACCCCCCCCCGTCAGCTCGCAACACTAGTACCCCTGGGC
AGCCAACAAGTAGCCAATTTCCCCAAAATATCAGTATCTGTTTCCCTTTT
CCCTCCAGGATAGAGCTTTTTTGAAAAATGTGGAAACAGATTCGATTTTC
TAGGAAAGACCTTTTCCTTAAAATCATCTGTTTCCCCGCTCCAGCTGATG
ACGTCGAAATAGATCAATATTTTCTAGGAGATGACATAATCCAGGGGATG
TCCAGACAATCTCAATCGAACGGAATCGACGATCAAACCAGTCGAACCAA
ATCGAACGCAATCGACCGATAGAAATTCAATTGTCGAACGCAATCGAATC
TCAATCGAATATTACCACAATTTTCAGATTCAATTGATATTCGATTGCTT
TGGATTGATGTTCGATTGTGTTGGATTGATGTTCGATTGCGTTTGATTGC
GTTCGATCGTCAAATCATTGACCCCCGGATTGTTCATCGCATAATTTCTA
CGGGAAATCGAAAGTAATTTCATTCAGCTTGTGATGTTTGAGAGCTTGGA
TGTTGTGAAGCTGCAAGAAAAAAGCCAGACGATCTCAATCGAACGGAATC
GACGATCGAACCAGTCGAACAACAATCGAACCAATCGAATATTACCCAGA
ATTTTGACATTCGATTGAGATTCGATTGCGTTCGACAATCGAATTTCAAT
GGGTAGATTGCGTTCAATTTGGTGCGAGTGGTTCGATCGTCGATTCCGTT
CAATTGAGATTATCTGGGGATGTCAATTGAACGTTCGATTGCCAATCGAA
CCAATCGAATTAATCCAATTTAGAACCTAAAAGTTAGCGAGCTAACTTAC
CTTGTTTCCTCAAATCACTGCCATCTTAGGCCCTAACCCATTTGAAAGAA
AAATTGATCCAGCTTAAAAACACGAGATTTAAAGGACATAAGGTAAACTT
TTAGTGAAATTATGGAGTTGATTGAGTGCGGCGCTTATCACGTGGGAGCG
TAAAAGCCCTCTGGGGGCATAAGGGGTTTGCAATTTCCGAAATACCAAAT
GTTTTTGCCAAAGATTTAAAAATTCCCACCACTCCGATACCAATTTTTTG
GGGTATTTTTCCTCGTTTTGACTAATGTTTCATTTTTGATTTTTCATGTA
TGTAATGAATTCCAAAAAAGGGGGATAAAAAAGTTATGATATCAATATTT
GGAAGCAAAAATTCATGGATTTCCGATACCGAAAAATATCAGGATTCTGA
AATACCGAATAAATTTTGCCTGATTTCTGAAACTCTGAAGAAAACAAGGT
CGAATTCCGCAATTTCAAAATACCATTTGTATCCTATTTCAGCGCTAATT
TCGAACTTAAGATTTTATTTATATTTCTGGAGTGTCTTTAATTATTACTG
CTGAGATAGTTCTGTGGTGTTGGTTCTGTCACGGTTATAAGATGGCAGGG
CTTATTGGAGGAAGCGCTTATTTCAAAACTTGAGATTACAGTGCAGCTCT
TATATTAAGGGAGGTGCTTAAAACAGGGCGACGGTATAGAGGAGATACGG
AACCACAAAAATCGAATTTACAAAAAAAATGGAACAAAATTTGATCGAAT
GCCAATCGAACATAAATTGAATTAATCGAATGCCAATCGAACATAAATCA
AATTGATCAAACATTAATCAAACTAATCAAATCAATCGAAAAGTATATGC
AATTGAAGCTAATCGAAACTAGTCAAACGTCAATCGAACACCAATTGAAC
GGTAATCGAATCCAATCAAAAAAAGATGTGAAATTCGATTGGGCTAATCG
AAAATCAATCATTCGATTGGCTTCGATTAAGTTCGATTGATTCGGTAATC
AAATTTTTCGATTGACATCCCCTGGCATAATATAAATTGAGAAACAGATA
TCTGTTTCCAAAAAGATGATATTGCCTTGGAAACAGATTGAATGTTCTGG
GAGAAAACAGATATCCTATTCTATATAAGCTTGGGAGAACAGACAGTCAA
AACTTAAACCTATCGTCAACTGCTCCAACTTGGGACGAGTGTACGCAACA
TGGGACTTGTTGATATCTGGCCTGTATTTTCACTTACTATTAAATCTCTT
TGACAACAAATTTGTTTCGATGACTCCACCAAGTTTATCAATCATACTTT
CTGTCATAACATGTCACGATAGCTTTCAATGATAGCGCGCCCTTTTTATC
TTTTGTTTTCATTTATAATGACCGGGCGCTGAATGGAGAATATTAGAGAG
CTTCGCCGCCTAGCCGCCTAACCGCCTACCGCTCGATGAGATTAACAAAT
AGTGAGTGTGTAACTTGCCGGGCGAGTGACGTCAAAGGCTCACATTCGCG
TGTGTTTTCCTTTACGGATTTTTTTCATATTTAGATTTAAAAGCATACTC
GATGCAGAAGAGAAATCCTGTATTTTTTAATACACCGTTCATTGAACTCA
AATCAAATGACTTTGGAGGTTTGGTGAAATAGTGGTGGAATGGCCGTCCC
ATGTTGCGTAAGATAGTCCCAAGTTGGAGCAGTTGACGGTAAATCAGGAG
TAGAAACTAGGCTAGACTTACCTTTTTTATCTTTTCCTTTTACAACAATA
CAATGCTGACAAGTTGACACAACACCATGTGTACATGTACATTGACAAGT
AATCCCTGAGAGAAGTTTTTATAGAAATCTGCAACAAAAACGAAAGTGGT
CTCTTCTACTGATTGCTTCCCATTTNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCTTGCCAAG
TGAACCGCTGCGAGTGGGAATCGAACCTCAGTCGCCTGTGCAGTAACCAA
GGTCAATGACAACTATACCACAGCGCTCCTTCGCAGCTGTTTATCAAATT
TTCCGCCAATGAGGTTGCTGCATTTCAAACAGCCTTCTTTTTGGCACCCG
TGGCATGGCATGAACCCCCCCCCCAGCCCGCAGGGGGGGGGCTACAACCA
AAATCTGGGCTGGATTTTTTTTTAATTTCAGGGGGTACCTATGATCTCTG
GGGGTGCCTAACTTTTATACAGTAAGGTCTGGGGGCTGGGGAACTATATT
TTATATCTTGCTTTTATCTATCTATCATTGACATTATTCTTTTTAATTAT
AAAAAATATACAATTTTTTCATTTCTTGACATATACAGAAAAACAATTGT
TCACAGGGGGTACCTTCTAACGTCTGTTGTTTGGGGGTACCTAAAATTCA
GGGGGTACCTATTTTCTTAGGGGGTACCTAAACCCCTGGTCCATCCCATG
GGCCGTGGCCTTCCAGTGCCTAGCACGACGGGTGGCTGTAAAATCCCACA
CTTCATATATTTGTTTCAATCTGTCATCCGTGGCTTAGGTTTTTTCTCAT
CTTCAATTTACTGAAGAAAGCGGGAATTTGATGCGAGAGTTAGATTGTCA
ACAAAGTGCTGTGAAAAATCATTGAATAAAAGAAGAACTTAAAATCTTAA
ATATTTTCATTTTGAAGAATAGGTGCAAAAAAGTGAAACATAGAAGAGTT
TCATTTTTCATTGCATTAATTGAAATGGGGGATTTCGAAAATTTTCTATG
TTTAGTTTTTTGCACAAACCCCTGTAACTATGGGCGAGCACCCCGTTGTT
AAGATGTTGGCTTGAAATCGAAAATAAAAACACTCAAAACGAAAGTAAAA
TCGGCCCGTACTATTCTGAAAATTGTTGAAACAGACCACAAATTTTCTAG
GGAATAAAATACTTTGAGATTAAAAATTTAAGTTTTGAGGAGAAACAGCA
AAACAGATCTTCATTTCTAGGAATAAGATTTTTGAAACTTTTGGCCAACA
AATCAAATTTTCCAGGAAGGCTATCCCTGGGAAACAGATATTTAAAAAAG
GCCCTCGCTGGATGCTCTCGGCATGTTGAGTTTCTTTTATCTTCTGTGCT
GTGTGCTGTGGTGCTGTGTGCTATGTGTGGCATAACTTATCTTTAGTATT
ATCTCTACTGTCAACTGCTCTAACTTGGGACTATCTGACAAAACATGGGA
CCGCAATTCGGCCACCATTTCACCGAACCTCCAAAGTCATTCCGTGAAGT
TGGGCAACTTGTATCAGTGGAGGCTAACATGCATAGCCCTTAAATGACTG
ACCAATCAAAGCAGCAAAATTTCAAAACAAATGAACTACAAGCTTCGCTC
GCAGCTCTACTCTACCATTTTTGTTTTGATTTAAGTTTGTATTTTAATGA
CCAGATAGGTCATTCATTTGACGGCTATTCATGTTTGCCTCTACTGATGC
AATTTACCCAACTTCACAGTTTGATTTGAGCTAATGAACGGCGTATTAAA
AAATACACAATTTCTCTTTCGCACAGAGTAGGCTTTTAAATCGAAATATG
AAAAAAATTTGTAGTGGAAAACACGCGAATGTCTGGAACGAAGAAGACCA
AATTAGTGGCAAAGCTACACACTCTTTATTTGTCAATCCCATTGGGCGAT
AGGCGGTTAGGCGGCTGGTGTTCTCTAATTCTCCAATCGGCGTCCGGTCA
TTTTGAATGAAAACAAAAAAGTTAAAAAGGGTGCTCTATCAGTGAAAGTT
ATCGCAACATGTTATGGCAGAAAGTATGATTGATTTAACTTGGTGGAGTT
ATCAAAACAAATTTGTTGTCAAAGAGATTTCACAGTAACTGAAAATACAG
GCCAGATATCAACAGTCCAATGTTTCAACCAATTGTCCCAAGAGCAGTTG
ACAGTACATTACTTATTGAGTAAAATTTATTCATTCCATTTGATATAATA
CTTTAGGATAGCATCACCTCGTTTCAAGTATTTATTTTGCATTTTGTTGT
AGCTTTCCACTTGGTTTCATCACCCACTTTTCAAATGTTAGGGGGGCACT
AAAGCTGATTGGGGGAGAGATTCATGATGGGGGGAGAACCTTTTGGAGAA
TTTTTGAAGTAGCACAAACCGTCAATAGAAACAACGCAACGGGTATGGCA
GGTAAAAAAACACTACAAACCCGAAATTTTCCTTTTCGTAGGTAAAATCA
CCGTAAAATCGCTTAAGTTCAACAGTAAGAGTGTAAAGTTTTGGGGATAA
AACTAGAAACTTCGGTGATGATTTTGTCACCAACTCAATTTTTTTGTAAA
AAGAAGTAACCTGCTGCTGCATGGACTTAGGCCAAAAAAAAAGTAGTCTT
TTTTCTGGAAATCGTTCGGGTGAACTTATTTTTGAAAGTAACCCAGCCGC
AAAAAAGAAATTTTTTTTTTGTGCTGTCAGAAATTTAAACTGAATATTTC
AGACAACTAGGCTCAAAAAGCTAAACGTTTTCTCAAGAAAACAAAGGTTT
TGTAACAGAGTAAATAATATACAGCAAAGACGAACGAACATTCTTATTAA
ATATTGGTATTGTATAATATTTGTGACGTCAATCTTAAATATAAATGATT
TCGGCTTTCTCTTTTATTTTTGTTTGTTGTTTGTTCTAACAATGCTTTTT
GTTTATATTCCACGTGCATTTGATCGCAGACATTTTTATACAATTTACAT
TTATACATAAATAGAAAGAGAAAAAAATCAAGTGTTTTAGAAAAATCTAA
AAATGTGAAGAAAAAAAAATTTGTGGCTGCCCGGGTGACAAGTTTTTTTN
CATTTTTATACAATTTACATTTATACATAAATAGAAAGAGAAAAAAATCA
AGAGTGTTAGAAAAATCTAAAAATGTGAAGAAGAAAAAATTTGGCGGCTG
CCTGGGTGAGTTTTTTTTTCACCCGAATTTCCGGAAACAAGAATCCTTTT
TTTTGGCCTTATTCCTAATTACAGTTTCATGTTGAATAATCAAAAACTGA
CTGACTCCAGCATAAGAACAATGACAACAAAAAATTTTGTACACACTTTT
ACTAATCATACATCACATATCAGTGTGTTATTGATTTGATTGAATAGAAC
CAACAAAACTTCAACAAATTGAATGCAATAATTGAGATTCAATGGCAAAA
TTTTGGGTATTATTTTTTTGACTTGATTATCTTCAATAGATAAGCACTGG
GGGTTGATATTTTCTAATATTTAAACCAGACTTACTCTTGATATAAGTAG
CCAGTAAAATTTGATGGTCATTCAAGAACCATTCTGACGCTTGTCAATAA
CATTTATCTTTTCAATCTTTCTACTTCTAGTTCTATCCCAAGGGTTGCCA
AAGTACTTCAAAGAAGTTTCAGTTAATGAAGTTGATTGTCCAAATTTGAC
GGAGAAACCATGGGGACTAGCTGCCAAAGGTAACAAAGTATGAAATTTTA
ACGCTTTTGATATAGTGTGGACACAAACTTAGCCTGTTGTAAACATCTCA
AACTTGTTAAAGTTGGGTTTTTCTTTGATCGATTTAGTTTTGGTAATATA
TTTTTCAATTGTAATTCAAGTCTGTTAGGTTTGGTAATTACCAATCAGCC
GATCAATGAGATTTAAAATTTCATTTGGCACCTTCTAGAGATCAGATTAA
AAGGAAGGTTGTAGTCACTGTGATTGAAAAAATAATAAGATGTTTCCAAC
CTGTTGGAATTAGATGAGGGATGTCGGGATTAGACCAACTTACGGTATTC
AACAATAGTAATAATAGAGACAGAGTGCTATTAGGAATAGTTTTCAATTC
AATATAAGCGACTTGTTTGTTGTATATATTCACATGTTTGTCAATATCGT
GATAATGTACGTTACAGTACGTTAGCGTATTATGTGATTAATTAATAGAA
TAGTAATTTTGTAGGAATCTGTGGCAGTCCAAAGAATTTAGATGTTGGTG
GACCACCATATCTTGTTCCTACAGTTCAAAGAGACAAGGTTTGAAAATCA
TAACATTTTTGTATGATATCTACAAGTTAATATACTACATTATTGGAACT
AATTTTCGCAGGTTTTAATTTTAGCATTTTTCGCGGTTTTTCGTCAAAAT
CGCGAAAATTTGATCCGCGAAAAAATTTTGAGAGTTGAAAACTGCGAAAA
TTAATTCCCGCAAAATACAATTTTTTCCAATTTTATCGAAAAATTTGAAA
AATCCCTAGGAAAATGAAAGAAATTTGTCCAAAAAAGGGGGAAGCCGCGA
AAATTAAAACCCGCGAAAATTCCAGAATGGAAAAAACCACGAAAATTAAA
ACCCGCGAAATGCAGTTTCTTTTTTAAATTATAATATTTTTGATCAGCTG
ATGGATTTTGGTTTATTTTGTTGTTTTATATTAGATCTACAAATTTGAAG
AACTTGCAAAATTGACAGGAATCAAAGATACATTTTTTATTGGAGCTGGG
GCTGGCCCATGTCATGTTGTTGGGGTTAATTCAGAGGTACTGTATTTTTA
TCACCCTATAGCAGATTAAATAGCATGTTTTGCTACTGTTAAATAATATG
TGTTGTAATTTCAACTTGTCATTATAATTTTTTACTCTATTACTATTACT
ATTACTATTACTGACCTTGTCAAAGATCTGTTCGGTAGAAAATTATTAAT
TCAGACCATAGCATCACTGTATAAGCTTTAGCTCAGTTCCAAATAGATTC
CATCTAATGATAACTTAAAAGAAGTGTTTTACTTGATTTTGATTCACGTT
TACACTGGCTTTTGCATCTTCTTTTAGTTTTACTTGTTTTCTGATAGGGT
TAGAATATTAAATTGATGTCTTTAGCTGCTATATCTATTGATTATTCTTG
ACATTTTTTTCCAAGCTTTGTTTGTAATTATAGTTTACACACTTTTAGAT
GATGGCAAATTTGAAGACGGGGGATTCTGAGAATGTTCAAACTTATGTTG
CAACAGTCAGAGATGATGTATGTATGTAAAGAAATTTGTTTTGTTTTTTT
AAATTAATTTTGATAACAAATTTTATGACACTTCTGGTATACTTTGAAAT
TTTTGTTGACACCCGCACATATACTCATGGTACCCTTTTTGCCTAAATAC
CTAGGCTCAAGCTTTGCTGAGATGTCAAGTTTAAAATAGGAGATTTGAGT
TGACTCTCTGAAGCTACTGAACTATACTTTTAATTTTAGAATTCATGTAA
CTTGAGACAAATACAAGCAAAAGATTTTTGTTTACTTGGGAATTTTTTAG
CCTCTGAAGGCAAACAAGGAAAGGTAAAAAATTAAACTTCGAGTTTTTAC
CCTTAATATTTTTGAACTACAATCATGGTCAGAATATGTCGGTATTTGCT
TTTTCGCAGAATCTAAAGTACGGGCAAGAATGACATTTTCAGGCTATAAT
CAGATAATTCGTTTGGTAGGGGTATAATAGCTTCCAGCTTAAACTAGCTG
GACCATTCACCAGCGTTTGGATCCTAAGCTCCTAAGTCTTAAGTCTCATG
TTTAAACTCAGAGTTAAAACTAAAACCAATATTACGTTATTAAGGCACTT
AAAAGTACTTGCAGTTTTTAAGATTCTTTGCCAAATTTTAATGGCCATGG
TTGTAATTCGTAATTTGTTTATCTTCATCTTTGTGAATTTGTCCTTCAAA
TTAACGATAAATTGATTTGTCCAAATAGGAAAACTTTTTCTTCGGAAAAG
TTATTTGTTGAACAAAACTCGTTATCACTGACAAAGTTTATTTCCTCTTT
TAGTCATTTTCAGCTCTCATGACATTAGAATACCTATCTAATGATTTCAT
TTTTCTTCTTTTTCTAAAGGTCATAAAAATCAATGTTAAAACACGCTTAT
CGGAAGAAAACTTTCCACTAGCTATTAGGAAAGTTTTAACTGAGTATTCC
CCGGACAAGATAATAGGGCTTGGTGGTGTTTTTGTTATCAAAAATGGTAA
AGCTAAGCTACATATCATGGTGAGCTTGTTGTTAGACTGTTAAAGGGGGG
ATAATATTATTTGTTGTTGTTAACAATTATGGTCCGTTTTGTGAGTTTGT
TTTCTGGTTACATTCCTCCCATTCATTCTTTTGGGCAGAAAAAGTGTGTC
AAAATGAAATAGGGTGCAAAAAATGTTTTTCTACTTTTCTGGTCGTGCCA
ACATTAAAAAAAGCATAAAATAGTGAAACATTCTGAATTTGTAGAATCTC
ATCTTAAGACTCTTAAAATGGGTCCTTGATTCGTGATGAATGCGCCTCTG
AAATCTGGCAGAGTAAAAGCTCAGATCTTCCTTCTTTTTTGCTCTTATAA
ATTTTAAATTTCATCAACACTCGAAAATATCCTAGAAATTACTAGATGCG
CGAAAATTAAAGGGACCACAAGTATCCTACTTTGCGCAACTATTAATGGG
TTTTTAAGGTATGTCTGATTTTGATGTTTGTCTATGGATAATTCTGGACT
CTCTTATAATTTTAACTGGGTTTCTTATCAGCTTAAACTTCATACAATGG
GCCATTCTATTTTATATCCATACAGGTGGAGCGGACGAACATTTTCAGAC
AGGGTAATCTGAGAAAAATTTTCCAGGGGGTGTTTTTTCATTTTTCCAAG
GGGTAAAAAGTTATTCTAAAATTTCCAGACTGATTCTAGTTCGTCCACCC
TCACTTTTAGGTATGAAAAAAGATTAATACTTCTTAAATTTTCCAGGGGG
TATTCACACATTTTCAATAATTTCTTTTTTGCCTTGAAAAGGTTCGTCCA
CCCCCTGTATGGTTTTTAATGGAACAGCCCAACTCTGAAGATGATTATAC
ACTAATGTGATGTTTTTATTTCTCTTCCCCTTTCTAGCCAGACTTCAGCT
GCACACCATTGGAAACTGACGAAGCTGTGAATAATTGGCTGACGTTCAAT
GTTTCAAGTTCACCTCTTGTCTGTTTGAGCGTCTTTTATAACGTTGATCA
GGTAACGAATGAAGTCAAACCATTTTTAACAGAAAAGGGTCTATTTGATT
TTGCAATCATTTGAAACTAAAACTATACTACAAGCTCTTAGCAAATGGAG
TGCTCGATTATACTTCTAAAAGCGCACAATACTGCGTCTGGCTTGTAGAT
AACCAACAGTAATGCTCCTAGACTTCGATGTTATCTCTCCTCTATTACCG
GCTATTTCCAACAACCTGCTAATGAAAAAAGTCAAGCTATTTTTAACAGA
AGAGGGTCTTTTTAATTTTGCAATATTTTCAAACTGAAACTTGATACAAT
ACCCACTTACTATATTCAAGATAAAACTCTTAACAAAAGGAGTGTTCAGT
TAGATTTCTGAAACAGCACAGAATGATCCAGCATCTAGATTTCAGCTTGC
AGTTTTCTCTATTTAATTACTTAACCTTTTCAGCTGTGTATATTTTTCAG
GCTGTGATCTCCCATGGGAGTGAAAAATAATAATGAGCATTTTCAGAAAA
AAACCATTACCAAGAAATTTGAAAAAGGTTTCGGAAAATCATTAAAATGT
GCTCTATTTTCTTGCCAAGTAGCAGAAGATTTTCCCATAAAAAATCTTGA
ATGTTACGAAAATCCTGAAGTTTTTCAAAAGTAAATTGTTACGGAAAATC
CATGTCGTCCACAGGGGGGGGGGGGNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTCTAGGGA
TATGATTTACGTATTGAGCACACGCATTGTTTCAGCCACCATGGCGAAGG
AGGCCATTATCATTACGACACAACTCCTGAAGAAGTTGAATATGAAGCTT
ATTTTGTAGTAGCCGAACAATTACTACGTGTGGACAGGCCTTTAAATACT
CACGCTGTTGGGCGTGATTGAAATATTTTGTTATGCTTCATTAGGCGAGA
CCAATTTAATTTGTTGTTCTACGGGCCTGACCGACCCTATTTTTGCTAAA
TTCAAAAAAATGATAATATTGAATTTCCACTATGTACAGTATATTTTACA
CACTAGTTATTTGTAAGAATTAAATTTGAATAAAGCTGAAAATTAATTCA
AGAAATTGAAAAATTTAGAAAATCAAGCATTTTATAAAAACAGTGAATTT
TTTAACCAGATAATTTTTCGAAAACATTTTCGGTACTTTAACAACTCTGA
TAAATGAAAGATTTATTTTTATTTTACCGACCGACCGACCCAAATTTTGC
TAACGATCTGCCCATAGAACAACAAATTAAATTGGTCTCGCCTTTAGTCA
AAAATATTTCCCGCTTTTCATCAATAAATTCCTTTTTCAATGCAGTACAG
TAGTTAAAGTAAAATTGCTAAATGTGGATGGACCAAGAAACCGAATTTTT
TTCATTATTGACTGTTGGTGGTTATTGATGAAATTCGTGGTTTTTTTAAA
AAACATTATATTTTCAAACACTACTCTAATTTGGTAGTAGGTTTGGATAT
CAGAGATTTTCACTTGTAGTTGTTGCTAGCCAACTATCCCACCGGAATGG
AGACCCTTATACTTGGAGATATTTCACATGGAGACTTTGATGAATTTTAC
TTTTCAAAAGTGAGGATTTTTTTGGGAACTAATTGTGATTTAGTGATAAT
TAATTCATGATAAGCACCACTGGAGAGTCTTCTGAGAACTTTTAAAATTT
TCCACCCAATACGTCACTTAAACAATAGAAAAAGTGACGTATTGGGTGGA
ACAAAAACAGAAAAGTTGCATAATTTCGTGAAGTCATCACAATGGTGCAT
ATCATGAATAGTAGAGAACATATTTTACACTAGCAATGGATACAATTGAA
TGTTGCATTGATAACTGGATGATATGAATATACTGTTTCTAGTCACTTTA
ATTTTTATTGAATTACTCCTTT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_002008XLOC_002008Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00003601-exon-sc0000030-1575043694:182019..182134TCONS_00003601-exon-sc0000030-1575043694:182019..182134Clytia hemisphaericaexon
TCONS_00003601-exon-sc0000030-1575043694:172706..172804TCONS_00003601-exon-sc0000030-1575043694:172706..172804Clytia hemisphaericaexon
TCONS_00003601-exon-sc0000030-1575043694:172147..172220TCONS_00003601-exon-sc0000030-1575043694:172147..172220Clytia hemisphaericaexon
TCONS_00003601-exon-sc0000030-1575043694:171649..171750TCONS_00003601-exon-sc0000030-1575043694:171649..171750Clytia hemisphaericaexon
TCONS_00003601-exon-sc0000030-1575043694:171168..171236TCONS_00003601-exon-sc0000030-1575043694:171168..171236Clytia hemisphaericaexon
TCONS_00003601-exon-sc0000030-1575043694:170862..170945TCONS_00003601-exon-sc0000030-1575043694:170862..170945Clytia hemisphaericaexon
TCONS_00003601-exon-sc0000030-1575043694:170166..170315TCONS_00003601-exon-sc0000030-1575043694:170166..170315Clytia hemisphaericaexon
TCONS_00003601-exon-sc0000030-1575043694:169184..169297TCONS_00003601-exon-sc0000030-1575043694:169184..169297Clytia hemisphaericaexon
TCONS_00003601-exon-sc0000030-1575043694:167163..168337TCONS_00003601-exon-sc0000030-1575043694:167163..168337Clytia hemisphaericaexon
TCONS_00003601-exon-sc0000030-1510915933:182019..182134TCONS_00003601-exon-sc0000030-1510915933:182019..182134Clytia hemisphaericaexon
TCONS_00003601-exon-sc0000030-1510915933:172706..172804TCONS_00003601-exon-sc0000030-1510915933:172706..172804Clytia hemisphaericaexon
TCONS_00003601-exon-sc0000030-1510915933:172147..172220TCONS_00003601-exon-sc0000030-1510915933:172147..172220Clytia hemisphaericaexon
TCONS_00003601-exon-sc0000030-1510915933:171649..171750TCONS_00003601-exon-sc0000030-1510915933:171649..171750Clytia hemisphaericaexon
TCONS_00003601-exon-sc0000030-1510915933:171168..171236TCONS_00003601-exon-sc0000030-1510915933:171168..171236Clytia hemisphaericaexon
TCONS_00003601-exon-sc0000030-1510915933:170862..170945TCONS_00003601-exon-sc0000030-1510915933:170862..170945Clytia hemisphaericaexon
TCONS_00003601-exon-sc0000030-1510915933:170166..170315TCONS_00003601-exon-sc0000030-1510915933:170166..170315Clytia hemisphaericaexon
TCONS_00003601-exon-sc0000030-1510915933:169184..169297TCONS_00003601-exon-sc0000030-1510915933:169184..169297Clytia hemisphaericaexon
TCONS_00003601-exon-sc0000030-1510915933:167163..168337TCONS_00003601-exon-sc0000030-1510915933:167163..168337Clytia hemisphaericaexon
TCONS_00003601-exon-sc0000030-1491911889:182019..182134TCONS_00003601-exon-sc0000030-1491911889:182019..182134Clytia hemisphaericaexon
TCONS_00003601-exon-sc0000030-1491911889:172706..172804TCONS_00003601-exon-sc0000030-1491911889:172706..172804Clytia hemisphaericaexon
TCONS_00003601-exon-sc0000030-1491911889:172147..172220TCONS_00003601-exon-sc0000030-1491911889:172147..172220Clytia hemisphaericaexon
TCONS_00003601-exon-sc0000030-1491911889:171649..171750TCONS_00003601-exon-sc0000030-1491911889:171649..171750Clytia hemisphaericaexon
TCONS_00003601-exon-sc0000030-1491911889:171168..171236TCONS_00003601-exon-sc0000030-1491911889:171168..171236Clytia hemisphaericaexon
TCONS_00003601-exon-sc0000030-1491911889:170862..170945TCONS_00003601-exon-sc0000030-1491911889:170862..170945Clytia hemisphaericaexon
TCONS_00003601-exon-sc0000030-1491911889:170166..170315TCONS_00003601-exon-sc0000030-1491911889:170166..170315Clytia hemisphaericaexon
TCONS_00003601-exon-sc0000030-1491911889:169184..169297TCONS_00003601-exon-sc0000030-1491911889:169184..169297Clytia hemisphaericaexon
TCONS_00003601-exon-sc0000030-1491911889:167163..168337TCONS_00003601-exon-sc0000030-1491911889:167163..168337Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000030supercontigsc0000030:167163..182134 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
8.84421	9.56736	7.69713	6.24976	10.0189	8.43508	12.0757	12.7726	7.46483	7.54267	5.87336	5.62925	6.18376	6.83812	10.4844	11.2378	7.71155	6.10346	6.44397	7.26185	6.73124	6.0096	8.27516	6.55167	4.70185	5.56208	5.47062	4.79542	5.39954	4.54935
Blast
[Close]
BLAST of TCONS_00003601 vs. Swiss-Prot (Human)
Match: CK054 (Ester hydrolase C11orf54 OS=Homo sapiens GN=C11orf54 PE=1 SV=1)

HSP 1 Score: 259.225 bits (661), Expect = 1.007e-79
Identity = 147/307 (47.88%), Postives = 196/307 (63.84%), Query Frame = 2 
Query:   89 VPSNEDICKVLSQGLPKYFKEVSVNEVDCPNLTEKPWGLAAKGICGSPKNLDVGGPPYLVPTVQRDKIYKFEELAKLTGIKDTFFIGAGAGPCHVVGVNSEMMANLKTGDSENVQ----TYVATVRD-DNSCNLRQIQAK--DF--CLLGNFLASEGKQGKVIKINVKTRLSEENFPLAIRKVLTEYSPDKIIGLGGVFVIKNGKAKLHIMP-DFSCTPLETDEAVNNWLTFNVSSSPLVCLSVFYNVDQGYDLRIEHTHCFSHHGEGGHYHYDTTPXXXXXXXXXXXXXQLLRVDRPLNTHAVGRD 979
            VPS E++  V+ +GL   F +V V+ VDCP+LT++P+    KGICG  +  +VGG PYL+P V + K+Y   ++AK   +   F +GAGAGP   +G NSE M  ++T +SE+      +Y A V   D  C L +   K  DF   LL N  ASEG+ GKVI++  K R    NF   +R+ L ++  +K IG+GG F+I+ GK K HIMP +FS  PL +DE VN WL F    +PLVCL VF + D G+DLR+EHTH FS HGEGGHYHYDTTP+ VEY  YF+ AE L R+D+P  TH++GRD
Sbjct:   10 VPSLEELAGVMQKGLKDNFADVQVSVVDCPDLTKEPFTFPVKGICGKTRIAEVGGVPYLLPLVNQKKVYDLNKIAKEIKLPGAFILGAGAGPFQTLGFNSEFMPVIQT-ESEHKPPVNGSYFAHVNPADGGCLLEKYSEKCHDFQCALLANLFASEGQPGKVIEVKAKRRTGPLNFVTCMRETLEKHYGNKPIGMGGTFIIQKGKVKSHIMPAEFSSCPLNSDEEVNKWLHFYEMKAPLVCLPVFVSRDPGFDLRLEHTHFFSRHGEGGHYHYDTTPDIVEYLGYFLPAEFLYRIDQPKETHSIGRD 315
The following BLAST results are available for this feature:
BLAST of TCONS_00003601 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
CK0541.007e-7947.88Ester hydrolase C11orf54 OS=Homo sapiens GN=C11orf... [more]
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