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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00003519 ID=TCONS_00003519|Name=TCONS_00003519|organism=Clytia hemisphaerica|type=transcript|length=1112bp
tATAGATGTAAATTTTGAGTCACGAACATcatttgcctcgttttgaagtt
attgccatggtgattaactcccagtggattttattacaagtacttcctat
tcataaaaaaatcatttaatgtcccTGTCCCAAGGGACAATCACCatagt
aattgtttgaatacgaggcaagtgatgtttgtgacgtaatttatgaaaag
gtctatcccaCTGCAGAAACCAGGAAAAGCTCGCCGACTGATATCGAACC
TCAGACCGATCATCCTATTATCAACTCTACTAAAATTGTGAGAGTATGCA
TGGTTGATCGAACTGGAGAAAGACTCGTTAATGAAACTCCAGTCACAGCT
CAAGCAGCCTATCGAAAGAACCACCTTTTTCCTACCAAGAACGAACAATA
TAATTGTAAAACGAAAACCTCCACCTCGTCATACTCGCCGCTTCGCTTGA
TTTCGAATCCCCCAAAGCATTCTATGTGCTGTATTTAGCTCAACGCTTGT
TAattgacaatgaaattacaaatctcttccccTGATAAGTTCGACAGAGT
CTAAAACTGCCTATGGACGGCATCAACCGAAAAGTCCTAATAGAGGTTAC
ACGGAAAGACCCTTTTCTGGACACGAGCTCGCTTATAGTCAAGAAGATGC
TGGAGAGAACGTAATCTGTGAGATGCGGAAGAAGCTTTAGTAGTAAAACA
TAAGCGATTTTATGTATATTTTACAATGAAACGATTTGGAAATAAACCGC
GGTTCTGAcccacaaaatcgaggacggaTATGAGGATTAACCGTCGTTCT
GAGTCTGTCAAAATCTAGACAAATCAAAACCTAACCGTCCCCGTCGCAGA
AAAATGCATAAATATAAAACTCGCTATTCACCATCGACACCGGAGCTTCT
CAAATGCCAGTGCCATAATAGCTTCACTTCCAGCCTCGAAAACTCGATGC
CAACCAAGACACCCGAAATTCAACTTCATAAACATAAACCATCATGAAGC
TTTTCCATCGTTACCCAAGTCAAACATCTTGACCTGGAAATGGAATATGC
AGATGACATGCCAAATCTTACTAGTGATTTGATGTGCGGCAGTAAGTACG
AGAAAGACGTAG Run BLAST on NCBI transcript from alignment at sc0000028:165469..166580 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00003519 ID=TCONS_00003519|Name=TCONS_00003519|organism=Clytia hemisphaerica|type=transcript|length=1112bp|location=Sequence derived from alignment at sc0000028:165469..166580 (Clytia hemisphaerica)
CTACGTCTTTCTCGTACTTACTGCCGCACATCAAATCACTAGTAAGATTT
GGCATGTCATCTGCATATTCCATTTCCAGGTCAAGATGTTTGACTTGGGT
AACGATGGAAAAGCTTCATGATGGTTTATGTTTATGAAGTTGAATTTCGG
GTGTCTTGGTTGGCATCGAGTTTTCGAGGCTGGAAGTGAAGCTATTATGG
CACTGGCATTTGAGAAGCTCCGGTGTCGATGGTGAATAGCGAGTTTTATA
TTTATGCATTTTTCTGCGACGGGGACGGTTAGGTTTTGATTTGTCTAGAT
TTTGACAGACTCAGAACGACGGTTAATCCTCATAtccgtcctcgattttg
tgggTCAGAACCGCGGTTTATTTCCAAATCGTTTCATTGTAAAATATACA
TAAAATCGCTTATGTTTTACTACTAAAGCTTCTTCCGCATCTCACAGATT
ACGTTCTCTCCAGCATCTTCTTGACTATAAGCGAGCTCGTGTCCAGAAAA
GGGTCTTTCCGTGTAACCTCTATTAGGACTTTTCGGTTGATGCCGTCCAT
AGGCAGTTTTAGACTCTGTCGAACTTATCAggggaagagatttgtaattt
cattgtcaatTAACAAGCGTTGAGCTAAATACAGCACATAGAATGCTTTG
GGGGATTCGAAATCAAGCGAAGCGGCGAGTATGACGAGGTGGAGGTTTTC
GTTTTACAATTATATTGTTCGTTCTTGGTAGGAAAAAGGTGGTTCTTTCG
ATAGGCTGCTTGAGCTGTGACTGGAGTTTCATTAACGAGTCTTTCTCCAG
TTCGATCAACCATGCATACTCTCACAATTTTAGTAGAGTTGATAATAGGA
TGATCGGTCTGAGGTTCGATATCAGTCGGCGAGCTTTTCCTGGTTTCTGC
AGtgggatagaccttttcataaattacgtcacaaacatcacttgcctcgt
attcaaacaattactatGGTGATTGTCCCTTGGGACAgggacattaaatg
atttttttatgaataggaagtacttgtaataaaatccactgggagttaat
caccatggcaataacttcaaaacgaggcaaatgATGTTCGTGACTCAAAA
TTTACATCTATa
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00003519-exon-sc0000028-1491911889:165469..166580 | TCONS_00003519-exon-sc0000028-1491911889:165469..166580 | Clytia hemisphaerica | exon |
| TCONS_00003519-exon-sc0000028-1510915933:165469..166580 | TCONS_00003519-exon-sc0000028-1510915933:165469..166580 | Clytia hemisphaerica | exon |
| TCONS_00003519-exon-sc0000028-1575043694:165469..166580 | TCONS_00003519-exon-sc0000028-1575043694:165469..166580 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000028 | supercontig | sc0000028:165469..166580 . |
Blast
The following BLAST results are available for this feature:
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