TCONS_00003506 (transcript) - C. hemisphaerica

Overview
NameTCONS_00003506
Unique NameTCONS_00003506
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length172

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00003506 ID=TCONS_00003506|Name=TCONS_00003506|organism=Clytia hemisphaerica|type=transcript|length=172bp
ATCGATACTGGGGCCTTGCAAGAAGCTTGTTCTTTGGGTACAAAGTCCAG
CGTATGGTTTGGATACAGATGACATCACAGTTCGAAGCATTGGTGAAAAA
TTAGCCTGTTCTCCTTGACATGTCCATCGCAGTTCGATCCCAGTCTGAGT
GAAGGTGGCGTCGAACTTCCCA
Run BLAST on NCBI

transcript from alignment at sc0000028:844842..845068-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00003506 ID=TCONS_00003506|Name=TCONS_00003506|organism=Clytia hemisphaerica|type=transcript|length=227bp|location=Sequence derived from alignment at sc0000028:844842..845068- (Clytia hemisphaerica)
ATCGATACTGGGGCCTTGCAAGAAGCTTGTTCTTTGGGTACAAAGTCCAG
CGTATGGTTTGGATACAGATGACATCATNGCTTGTTCTTTGGGTACAAAG
TCCAGCATAGGGTTTGGATACAGATGACATCACAGTTCGAAGCATTGGTG
AAAAATTAGCCTGTTCTCCTTGACATGTCCATCGCAGTTCGATCCCAGTC
TGAGTGAAGGTGGCGTCGAACTTCCCA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_001948XLOC_001948Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00003506-exon-sc0000028-1575043694:844996..845068TCONS_00003506-exon-sc0000028-1575043694:844996..845068Clytia hemisphaericaexon
TCONS_00003506-exon-sc0000028-1575043694:844842..844940TCONS_00003506-exon-sc0000028-1575043694:844842..844940Clytia hemisphaericaexon
TCONS_00003506-exon-sc0000028-1510915933:844996..845068TCONS_00003506-exon-sc0000028-1510915933:844996..845068Clytia hemisphaericaexon
TCONS_00003506-exon-sc0000028-1510915933:844842..844940TCONS_00003506-exon-sc0000028-1510915933:844842..844940Clytia hemisphaericaexon
TCONS_00003506-exon-sc0000028-1491911889:844996..845068TCONS_00003506-exon-sc0000028-1491911889:844996..845068Clytia hemisphaericaexon
TCONS_00003506-exon-sc0000028-1491911889:844842..844940TCONS_00003506-exon-sc0000028-1491911889:844842..844940Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000028supercontigsc0000028:844842..845068 -
Expression
No biomaterial libraries express this feature.
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00003506 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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