TCONS_00003490 (transcript) - C. hemisphaerica

Overview
NameTCONS_00003490
Unique NameTCONS_00003490
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length964

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00003490 ID=TCONS_00003490|Name=TCONS_00003490|organism=Clytia hemisphaerica|type=transcript|length=964bp
CCCGCGTGCTTTCCACATGCAATTTCCGCGCCATCTTGTTTGTGTAGCAG
TACCGTCACCGGGAAATATTTTGGGGAAGAATTCGATCTCAGTTGGACTC
ACAACGCCACAATTAGATTATACTAAATATTCAGACTTTTCTAATTAAAG
TTTTATCGCCAACTCAAAAAATCCTAGAAAGTGAACCTTGAATCGTCGCC
TCTTGACTTTTTCTAAACACTGGCAAGGAGGAAAAGACAATATTCAGCAT
ATTACGATTCTCTGGAGttGAATTGGACTTTGCCAGAAAGACAAGATATC
TTCACCATATTCTGTTTTGGTTACAACACAAAGAAAGCTACAAAAATGTC
GAGTGAAAAGACCCCCATCACTGGCGACAACAAGTTGCAGCAAACACAAA
AGCAAGTTGACCAGGTTGTTGATATAATGCGACAAAACATGGACAAAGTT
TTGGAAAGAGATTCTAAATTATCAGAACTGGACAACCGTGCTGATGCTCT
ACAAGCAGGAGCTTCACAGTTCGAAACAAATGCTGGtaaattaaaaagga
aaatgtgGTGGCAGAATTGTAAAATGTGGATTATTCTCATTGTTGTAATT
CTGGTTATCATTGCAATTATAGTCATTTGGGTTGTATCTACCAATTAGAA
AATCATTATTGGAGTTGGAACACTGTACTTCTGTAGCACAACACTGATGA
CAAAATGTTAGCTTTGGCTGGTCACTGGGGATATGATGGTATATATTTAC
TTTGGCAGATGATATTCTTGAtgttgtgaaggaaaataaaatgTGGGGAG
AAGACACAATTATACAAATTGTTCTCATGGAGTATTTTGTACATAGctat
ttttttaatgtcgatATTGCAGTTTGTATAAGACCTTCTAAAAGATTGTT
AATTATTATGTACAAAGCACACTTTTTGTTAGAAAGTGTTTGTGCGACAA
Cctttttcttccat
Run BLAST on NCBI

transcript from alignment at sc0000028:474216..484080-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00003490 ID=TCONS_00003490|Name=TCONS_00003490|organism=Clytia hemisphaerica|type=transcript|length=9865bp|location=Sequence derived from alignment at sc0000028:474216..484080- (Clytia hemisphaerica)
CCCGCGTGCTTTCCACATGCAATTTCCGCGCCATCTTGTTTGTGTAGCAG
TACCGTCACCGGGAAATATTTTGGGGAAGAATTCGATCTCAGTTGGACTC
ACAACGCCACAATTAGATTATACTAAATATTCAGACTTTTCTAATTAAAG
TTTTATCGCCAACTCAAAAAATCCTAGAAAGTGAACCTTGAATCGTCGCC
TCTTGACTTTTTCTAAACACTGGCAAGGAGGAAAAGACAATATTCAGCAT
ATTACGATTCTCTGGAGGTATTTACCTACAATTTCACAAACAAACATTTT
GTGCGAGAAACTTCAATTCAAGCTTTTAAGTTAACTGCACCGTTGTTTTT
ATTTTTTATCAGGTATCTATGACACTGAAAATCAAATAGAAACTAAAAGC
AAATTTTTTCTTTAAAAAATATCTTGATAATATCTTTTATTTTTATTTTT
TTTCTTAGTTGAATTGGACTTTGCCAGAAAGACAAGATATCTTCACCATA
TTCTGTTTTGGTTACAACACAAAGAAAGCTACAAAAATGTAAGGGCTTCT
TAATTTCATTTTTATACCGTTATTATTCATACTTAAATTTTTGAANAAGC
TACAAAAATGTAAGGGCTTCTTAATTTCATTTTTATACCGTTATTATTCA
TATTTAAATTTTTGAATCTCTCTCACTCACACAACAATGGGTCATTCCAG
ATAAATTTTATTACCCCCGTCTAACGACGTACATTTTGAAATGTTTTCTA
GCTTCAAAAATAATTTTTTGTTCAGTGGTGGTCCGAAATTCCAATGAAAA
TCCATGTCTTTTTGCAAAATACGTTGGAAATTCAACTCTTATCTTTTTTG
CTGTTTTTATTTCAATTGCCTTGGAAATTCATGCATTTTCTTCTCTGGCC
TTGGAAATTTTAAATTTTTGGTGAACACCGTTGCCCTCTGAAATTTTGTG
TCGTCCGCCCCCTGTACGTGTTACAGACAAATTCTGGAATGGCCCAATAC
CGTAAGTTGGTCCAATTTTGACAACAACCCACGGCATGGCCCGAGCATAA
TGTTTGGGGCCTCTTGATTGATACTTTTTTTAAATGGCCCGCGCGTGGCG
CAGTTTCGTACCATGTTCAGGCCAGATTTTCGAAAACTTGCTACGCTCGC
GCGTGTAATTTCAGGACCCAATATTTTTATTTTAAATTCCTTATTTTAGC
AAAGAAATTTAAAAATCTTCATCTTTATTCAAATATATATTGTTCAAATA
TAAAAGTTAATCATCTATTTTCCAATTAAGTTAGGAAAATTATTAAAAAG
TTAATCATTTGAATCTTACATAATATGGTCTTCTTTTTATTCTTTATCCC
GTTCCCTTTTCTTGTGGTCTTCCCCTATTCGAAGCAGAATTTTTCTGGAT
CGTTTTTTTTACTGTTATACAACTTTGTGAATCAAACTGGTATTTGGAAC
TTTGAATTTGTTTAATGAAAATATTTAACAATGGATGATGATAAACCAGG
AAAGGTAAATAAAATTAAATTCAATTGTAAATGGCCCGAACATGGTCTGA
ACAGGCCCGAACATGTTCGGGCCATGCCGTGGGTCGTTGTTGACATCCCT
CTTCTAATTTCGATCACCCTTCTTTAAAGATAGGAATAATAGGAAGGTCA
GAATCACTGATGGACTAGATTTAGACAAAGTCAAAACCTAAAAGTCAGTG
CTCTGTGGTTGTGAAGTAGTTTACAAAATTGTTAAGATAAAAAAAATGAC
ATAGTACTTTTAAACAACTTTTTTCAAAATCATTTTTTTGAAGCTTCTTC
GTAGAAGAATGTGTCTTTCCATAAGGAATTTTGTAACACTTCATGGCAGA
TTAATAAGACAATCAGTTGGGTGTTTTAAAGATANATTTGTTTAATGAAA
ATATTTAACAATGGATGATGATAAACCAGGAAAGGTAAATAAAATTAAAT
TCAATTGTAAATGGCCCGAACATGGTCCGAACATGTTCGGGTCATGCCGT
GGGTCGTTGTTGACATCCCTCTTCTAATTTCGATCACCCTTCTTTAAAGA
TAGGAATAATAGGAAGGTCAGAATCACTGATGGACTAGATTTTTTTCTCT
CTCAGATCGATAAGCAAAGAAAATTAGTTCAATCAGGTTCAATGTGTCAG
TCAGTTAGTGAAAGTACCTCGATTTCAAGCATGGTCAAAGTTCACAGTAA
GAACGACTTTCTTTTTTATTACGGAAACCAAATGAGTGAGAACAAAGTCA
AAACCTAAAAGTCAGTGCTCTGTGGTTGTGAAGTAGTTTACAAAATTATT
AAGATAAAAAAAATGACATAGTACTTTTAAACAACTTTTTTCAAAATCAT
TTTTTGAAGCTTCTTCGTAGGAGAATGTGTCTTTCCATAAGGAATTTTGT
AACACTTCATGGCAGATTAATAAGACAATCAGTTGGGTGTTTAAGATAAA
AACGGCAATTATTGCTCTTTTCGGCAATTATTGCCGAAAACGGCAATTTT
TTCAACAATGAAATGCTGAATCAGCAAAATGTGTTGTCCTTTTAAGGGCA
AAGATGTCAGAGGTGTTTGAAAATAGTAAAATTGCTTTGAGAAAAAGGTT
TTTCAGGATTTTTAAAAGTGATTTTTTCATGGACAATAGGAAAACGAAAG
CTTCTTCGTTTTAATTTTCGCATTTATGGGGAAGAATAAAACTTTTAGAA
AATGTTTATTCAATATGAGGATTCCCATTTCCGTAAAATCGCAATTCCCC
ATGGCTGCAAAATGGTGTCTATGGGTAATTCTTTTGTTCCTTTGCTATTT
TCTTTTGTTCTATGTGACATAAAGAAGCTTCACAAACCGAAGTACTTCCA
CTAACTGTCAGTGATTCTGACCTTCCTATTATTTCTATATCTAAAAAAGG
GTGTCGAAATTAGAAGAGGGATGTCGCTAGTAGTAGACCAACTTATGGTA
CAACATACGATCAATAACTTTTTCCAATCAATGACCATTTGTTAACCAAT
CGATGGATTGGAAGCGAAAAGAAGCGGCGAAAGAAAAGGCGCTGTGGTAT
AGTGGTCATTGACCTTGGTTGCTGCACAGGCAACTGAGGTTCGATTCCCA
GTCGCAGCCTTTCACTTGGCAAGTAAATGAACCTTCACCCGGGTCAACCC
ATGCCATGTGAAGAGAATTGGGTACTCAGTGTAAGGTGCTGGCGGCGCTC
TTTGAAGCATCTATAGTTGCGAAACTCAACCAAATAGAATAGAAAAAAAA
GATGTCATTGACCACATTCCTGGAATTTTCAAATGAAGCAGCCTGAAAAT
GCTACGAAAAAATTATTTAATGGTGGAAGGAAAGTGAACAAATATCATAT
CAATATCATTCTTGCAGCTACAAGGTTTGAACATGAGAAATTGGCAAAAA
TCATTCCGTTTTTTCCATGTCTTTATAATAATTCCTTGGATTGAGATGTT
TTGTGATGTTTTACATGTTATTCAAGTAGGTTAAAACAAATTACACAACC
CCACCACCTCAATCACTATCTAACCAAACCGTATCCACTTTGTTAATCTG
GTTATCAAAATCTTTAAAAAGCATTCAAGCTCTATCAGAAAGATTTTCCC
CTGCAATGTCTCATATTGTATCACTTTTATATCAGCTGACTTTCACATGT
ATGCTCCATATCTGCAACTGGTGTGATTTCAATTTAACTTTCCTAGTTAA
CTTGATTCTTAGGCTGTTCCTTATAAAAATCCTTATGGGTGTCATAAAAC
AATTTTCAATTTCTTTTCAAAAGTGATTGATTCAAGGGTACATTTTAGAT
ATAGCACATGTTCACACTAGGTATTTAAAAAGATAATGTTTTATAAATAT
GAAGACTTTTAAGGGCTGAATGCTCAATGATTCCTTGGCCATGCTAATTA
AATCTGTTTACTGGTTATAATGGAATAGGTTATGTATCATGTTGAAATTT
AATTTTTTATGGTCTGATTCTTTATCTTTTAAGAAAAATCAAAAATCAAT
TTTACTTTAAAGTTAAACTTAAGATTTTTCAAACTCGAAATTATGCATCA
GGCTGACTTAAAACACTCTTTATCTAGTGACTCAGAAAGAAGAATGTTTT
TTGGAATAACCTTATTTTAATGATTTTGTACTACTGTAATACAGATTAAA
TATTGTATCAAATAATCTCTAACACTTTCAGGTCCTACGAATCAACACCA
ATCAGTAACTCTCCTTCACCGTATGGGTAACTAATTTACTAAACACTGAG
TTGAATCAGAACTAACAAAGTACATTTCAAGTTTACAATAAAGAACTTGC
TAATAATTAGATATAATTAACACTATAGATATGATTAACACTAAAGATAC
AATTAACACTATAGATACAATTAACACTATGATTATTGACATTTAAATAT
TAAAACGGAACTTTAAATAACCAACCAACCTCCCCTAATGGCATTACTAA
AATCTCAGACATATTTTAGGACTAAAATAATTGTCCTTGATTCATTGAAC
CATAACCCAATTTTAAAAATAGGTATGTTGATAAGTATGCAGGCCATTTT
TCATGCCCTTTAAGCGTCTGATTATCAGACGCTGCCCCTCTTGAAATTAC
TAGAATATTGGTAAAAGCAGCCTTTTTAATGGAAAAACACTGGAACAAGC
ACTCTTTTTGGCCACCAACGGACGCTGCCTTACCTTTCTAAAATATGGCC
TGGTATGTACACATGTTTTAGCCGATCTTGAACCTAATTTTGCTCTGATT
CTCTCAAAAAGGAAACTTGAATATAAAACCCTGCACAGGTATTAACAGTA
AGGGTTCTACTTTTTAAATCGAGGAATTGCATGTCTTCAAAAAGTTCTTT
AACCTTTCCGCCCCGAAAGACGTATCTGATACGTTCACCATACGTTCCGA
AAGACGTATCTGATACGTTTTTAAGGTAACCTTTATATTTGGTCGGATTA
CGCCCCAACCGTCAGAGGTACGGTAAAACCGATTAAAAAATCGGAATCAG
CGTGAAATTTCAGATAAGAAACAATCAGGGTTTGTTTTGCTATGACGCAA
CATTTTTCAAAAATAGAAATGGTAGACCAAGCTGTGTTGCGTGATTTTGT
GAAACTGGAGGAGGCAGAAAGTTAGCTATGAAAGTAAGGGTTTATAANNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAA
GTAAGTGTTTTTATCAATTTTTCAGTTCTCTATAATTTTTTGAAGTTTTG
CACCAAAAAATGACTTTTTCGCGACATTGTTTTTTCATATACCTTTTGTT
TGGCTTCATAATTTCTGTCCAAAACAGTTTGAAGTACTCAGTTAAACATA
TTTAGAAAGGGGAAAGGTAGGGCTTTCCAAAAATATAAGGGTTTTTTTCT
GAAGTTAATTTTTCAAAAAGTTATAANNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAAAAAGTTAT
AACGGTTATCGTGAAAATTGCATTTTCATCAAAAAACGTTGCGCGCAGAC
GGGCTGAAGATATAAAAATGTTGCGCGCTGGAAAGGTTAAATGTGAAAGA
ATCTTGATTTGGTTGGAATAGTTACATAACATGGAAAAGATTGAAGACAG
TATATGACGAAAATTCTTAGTACATAAAGTTTTTAAACAATAATACTTTT
GAAAAATATGTTCTCTCTGAGATTTTAGTAATGGGGTAACCTTTAACATT
TACTCGGCTTAAACATACATTTTTTAACAGAACACAATATTTTGAAGATT
ATCATCAAGTCAGGGGGGGGTATCGAGTCAGTGTACTGGNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNACAGTGTACTAAA
AAGGGTGGTGGTCTAATTTTTTGGAAAAAAATCCAAAAATCAAGTTAGTA
CCCTATGGTCCAGTACACTGACTTGGTACCCCCCCCTGATCAAGTCCTTG
TAGCAATAATGAACGGTGAAATTTTATTGTAATCAGGAAATTTTACATGA
TATTTATAATAATGGGTCTTTATAATTGACCTTTTATTTAATTTTACTGA
TAACCAAACCAATTAACTGACACAACTTCAACATAAAACACACATAGTTG
GACCCTTGACAAACCCTTTTCAACAATTTTCTTGCTTCTGTAGGTCGAGT
GAAAAGACCCCCATCACTGGCGACAACAAGTAAGACTTCTATTTTGATAT
TAGGCAAGACCAATTTGATTAGTTGTTTTATGGGCCGGACCCGCCCAGAA
ATTCCAAAAATAAAAATAAAAATCGACTGACCGACCCTCTTTTTTGGGTA
GCTTGGCCCGCAAAACAACAAATTAAATTGGCCTCGTCTTACAGCTACTT
TTTTGTTTAATTCCTAATCAGTGATAAATTTACCACTAGCATTTTTCTCA
TGTGGGCAGATCTCGTCTTGCAACTATTACTTCTTTATGACTGAACTTTA
TTTTCTGTTCAGGTTGCAGCAAACACAAAAGCAAGTTGACCAGGTTTGTT
TTACTAATTTGTTTTTCCGTTTTGATTGACTAGAAAGGCATAAGTTCATT
GAACAAATTTTTCTTAGTTATTTTCTGAATTGAAAAAACTTTTGATTTGA
ATGAAAAAGACTTTCATACAACAGTGCTTTTAATCTAGGACTACAAAGTC
TAGCCGAAAACCAATGATGTATGCTTTTATATTCTAGGTTGTTGATATAA
TGCGACAAAACATGGACAAAGTTTTGGAAAGAGATTCTAAATTATCAGAA
CTGGACAACCGTGCTGATGCTCTACAAGCAGGAGCTTCACAGTTCGAAAC
AAATGCTGGTAAATTAAAAAGGAAAATGTGGTGGCAGAATTGTAAAGTAT
GCTTGCTCTCTTTAAATATTCGTCCATTTGTACCTATATGCCACTTTTAT
GGTCTCAGTGNAAAGTATGCTCGCTCTCTTTAAATATTCGTCCATTTGTA
CCTATATGCCACTTGTTAACACTTTTATGGTCTCAGTGGTATCCTACACA
TTCTAAATCTAAAATCAAGTAAAAAGAACAATTCTTTTTCCAGAATTTCT
CAATCAAAGAAAAACTGCTATTTTTTTAAGACACCTGTTTGAAAAGACTT
GTTGTTATGTTCTAAGGCAAAATAAAGTACTAGAAAAAGTAATGAATAGA
ATCGCTCAATCATCATTTACTCTTTCTTTTAGATGTGGATTATTCTCATT
GTTGTAATTCTGGTTATCATTGCAATTATAGTCAGTAAGTAAATACTGTC
CTCAATGAAAGCTACATTTGCTTAGTGCATTCTTGTGCAATCAAATCAAT
ATAATTTTCCCAATATATTAGGTTTTCACCTTGAAAGTGAATGGATGAGA
TTTGCAGTACCTACTCTTTAAGCTATGAGTTCTAGAACTGCTCGAAAAGC
TTGCAAACGATTCAAGTGGTTTTGGACCCATTCATTTTATTATGATATAA
ATTTCCAGAGATATACCATACCAAGGGGGGATTGACCATGAAAAATGGAA
TGATATACCTAGAAAAATCTTCATGTAAATTATGAAAATGAAAAATTCAC
TGAAAATTCTAGATATAATTAACCAAATCTTTCCATTCACAACTTTCCTT
TAAAATCGTATAAACAAATTTCCGTCAGTCAAAATGGGTCCATTTTTTGA
GCCTCACCAATTAGAATATCCCTGTTCAGGCTTTTCCAGGAAGAAATAAG
TAGGTGAGCGACGAATCACTCACGTAACAAAGACAAAATTTTTACGAAAT
CACGCACATGAACCAATCTTAGCGTGTGCGATTTTGTACAAAATGCCCTT
AGATATTTTTCTATAGAATCAAAGTATAATTGATGTGCCCAATTTTTCGC
TCATCATACGAGATTGACAAGTGTTTTACTAAAAGCGAGCGCGATCGCGC
ATGTCTTATTGAAAAGCATGCCTGTTCAGCAATAATTTGAAATGGCCAAA
AATTCACCAAATTTACTGTTGGCATCATCAGCTGTACACCAAGATCTACA
TTTTGCCATTGAATCATTCTAATTGAAAATGGTACAATTTATTGAATTTC
AATATCTAAATTACAAAATTATTAAGTTTGGCACTTTACTGCCTCAGCTG
AAATATTGTGAAATATATGAAAAAAGTCCAATATATTTTAGATCGATTGT
GGGGTTTTTCTGGTGGTTCTTGGAACCATAACTTATTTTGGTCAAATTTC
ATATTATTTTCTTTACTTTTCTTTAGTTTGGGTTGTATCTACCAATTAGA
AAATCATTATTGGAGTTGGAACACTGTACTTCTGTAGCACAACACTGATG
ACAAAATGTTAGCTTTGGCTGGTCACTGGGGATATGATGGTATATATTTA
CTTTGGCAGATGATATTCTTGATGTTGTGAAGGAAAATAAAATGTGGGGA
GAAGACACAATTATACAAATTGTTCTCATGGAGTATTTTGTACATAGCTA
TTTTTTTAATGTCGATATTGCAGTTTGTATAAGACCTTCTAAAAGATTGT
TAATTATTATGTACAAAGCACACTTTTTGTTAGAAAGTGTTTGTGCGACA
ACCTTTTTCTTCCAT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_001940XLOC_001940Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00003490-exon-sc0000028-1575043694:483814..484080TCONS_00003490-exon-sc0000028-1575043694:483814..484080Clytia hemisphaericaexon
TCONS_00003490-exon-sc0000028-1575043694:483543..483622TCONS_00003490-exon-sc0000028-1575043694:483543..483622Clytia hemisphaericaexon
TCONS_00003490-exon-sc0000028-1575043694:476602..476637TCONS_00003490-exon-sc0000028-1575043694:476602..476637Clytia hemisphaericaexon
TCONS_00003490-exon-sc0000028-1575043694:476288..476318TCONS_00003490-exon-sc0000028-1575043694:476288..476318Clytia hemisphaericaexon
TCONS_00003490-exon-sc0000028-1575043694:475935..476093TCONS_00003490-exon-sc0000028-1575043694:475935..476093Clytia hemisphaericaexon
TCONS_00003490-exon-sc0000028-1575043694:475547..475598TCONS_00003490-exon-sc0000028-1575043694:475547..475598Clytia hemisphaericaexon
TCONS_00003490-exon-sc0000028-1575043694:474216..474554TCONS_00003490-exon-sc0000028-1575043694:474216..474554Clytia hemisphaericaexon
TCONS_00003490-exon-sc0000028-1510915933:483814..484080TCONS_00003490-exon-sc0000028-1510915933:483814..484080Clytia hemisphaericaexon
TCONS_00003490-exon-sc0000028-1510915933:483543..483622TCONS_00003490-exon-sc0000028-1510915933:483543..483622Clytia hemisphaericaexon
TCONS_00003490-exon-sc0000028-1510915933:476602..476637TCONS_00003490-exon-sc0000028-1510915933:476602..476637Clytia hemisphaericaexon
TCONS_00003490-exon-sc0000028-1510915933:476288..476318TCONS_00003490-exon-sc0000028-1510915933:476288..476318Clytia hemisphaericaexon
TCONS_00003490-exon-sc0000028-1510915933:475935..476093TCONS_00003490-exon-sc0000028-1510915933:475935..476093Clytia hemisphaericaexon
TCONS_00003490-exon-sc0000028-1510915933:475547..475598TCONS_00003490-exon-sc0000028-1510915933:475547..475598Clytia hemisphaericaexon
TCONS_00003490-exon-sc0000028-1510915933:474216..474554TCONS_00003490-exon-sc0000028-1510915933:474216..474554Clytia hemisphaericaexon
TCONS_00003490-exon-sc0000028-1491911889:483814..484080TCONS_00003490-exon-sc0000028-1491911889:483814..484080Clytia hemisphaericaexon
TCONS_00003490-exon-sc0000028-1491911889:483543..483622TCONS_00003490-exon-sc0000028-1491911889:483543..483622Clytia hemisphaericaexon
TCONS_00003490-exon-sc0000028-1491911889:476602..476637TCONS_00003490-exon-sc0000028-1491911889:476602..476637Clytia hemisphaericaexon
TCONS_00003490-exon-sc0000028-1491911889:476288..476318TCONS_00003490-exon-sc0000028-1491911889:476288..476318Clytia hemisphaericaexon
TCONS_00003490-exon-sc0000028-1491911889:475935..476093TCONS_00003490-exon-sc0000028-1491911889:475935..476093Clytia hemisphaericaexon
TCONS_00003490-exon-sc0000028-1491911889:475547..475598TCONS_00003490-exon-sc0000028-1491911889:475547..475598Clytia hemisphaericaexon
TCONS_00003490-exon-sc0000028-1491911889:474216..474554TCONS_00003490-exon-sc0000028-1491911889:474216..474554Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000028supercontigsc0000028:474216..484080 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
545.17	541.569	594.071	595.151	190.497	146.475	249.442	281.875	296.373	269.242	241.054	221.13	155.126	135.602	142.564	144.209	195.62	185.765	150.095	180.777	174.358	160.591	327.614	293.298	123.68	142.549	262.663	210.463	264.399	269.556
Blast
[Close]
BLAST of TCONS_00003490 vs. Swiss-Prot (Human)
Match: VAMP3 (Vesicle-associated membrane protein 3 OS=Homo sapiens GN=VAMP3 PE=1 SV=3)

HSP 1 Score: 96.2857 bits (238), Expect = 2.437e-24
Identity = 60/78 (76.92%), Postives = 67/78 (85.90%), Query Frame = 1 
Query:  346 MSSEKTPITGDNK-LXXXXXXXXXXXXIMRQNMDKVLERDSKLSELDNRADALQAGASQFETNAGKLKRKMWWQNCKM 576
            MS+  T  TG N+ LQQTQ QVD+VVDIMR N+DKVLERD KLSELD+RADALQAGASQFET+A KLKRK WW+NCKM
Sbjct:    1 MSTGPTAATGSNRRLQQTQNQVDEVVDIMRVNVDKVLERDQKLSELDDRADALQAGASQFETSAAKLKRKYWWKNCKM 78
The following BLAST results are available for this feature:
BLAST of TCONS_00003490 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
VAMP32.437e-2476.92Vesicle-associated membrane protein 3 OS=Homo sapi... [more]
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