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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00003445 ID=TCONS_00003445|Name=TCONS_00003445|organism=Clytia hemisphaerica|type=transcript|length=1208bp
GTTATGTCCTTCAAAAAAGAAAGCTTTCAAATCAACCTGGGTATCAAATA
ATGGAATGGGTAAAAAACTAAAACATCACGAAAATATTGGATCAAAGTTG
GCTTCGAATGAAAATGCTCTCTAATATGACGTTCTACCTTTCGATAAGTC
ACTGAGGGTTTTCGCTCCCGTCTTGTTCGATTTCTAGCATGTAAAGAGCT
ACATACCAGGCAAGTATACCAGAGCTTTTGAGATATGTTTTAAGTAAGGG
ATCGTAAGTagtcagaaaaaataaaaaataaaaatgataattagaaaaaa
aaaatgaaaaaacaaaaattaatgataataaaaaatagtttcttttttaa
aactCAAGTTGTTActcttttttaaagaattttgaaattcatatttcgtt
ttgaATGAATTTCTTGCGTGCATAAATATAATTGGAAGATACGTTGTTTT
TAAAATGGGTATaataatattatattattttggtACTGTGTAAGACCCAC
ACCCTGATTTTATTTATACATCCCTAAGTTGAAGGGCGGGAAATCTAAGA
GCGCTGTTTACCTTCACCTGAGGTCAGAACCAGCCGCTTTCCACCTTCAC
GTCTCGCGGTTTCTTTCGTGCTTGAAAATACAGCATGAGTAAATAGCTTT
GCATTTAGGTATGGTCATGATTGATAGAGCCGTTTGCGATCACGGGTGGT
TTTTCCTCAATACTATTATTTCGGCTACCGGAGTTTTTAAAAGATGATAT
CAAAACTCCGGTCGTATTGTTCGCTTGTCCTTTTGAATGATTTGAACGAG
TTTCTAATGAATTTTGTCCGATATTAGTTCTATTATTCAAGGGAGAAGAC
CCAAGAGTTGTTGTTGAATTCGGAGGTGTCGTTCCGCTGTTTCGATTTTC
ATTCCGGTTATTATCGAAAGACGTTTTCCGGCTGTTATTACCGCTGGTCG
GTGGGTGTATGTGTCGGAAATCACCGGATAATTTGCGTTCTTTATCTTCG
ACGATTTTCTTATGAATTTCTTGGTGCAGTCTCTTATCGAATTCACGACT
GAGTTTACGGCTGATATCTCTGTCTAATTTCCGTTCGAAATCAGGCGTAA
ATTTCTTTTCTTGCTTCTCCTGCGTTCGTTGCTTCTCTTCTTCCATTTTA
CGACCCATCTCGACGTAATATTCGAATGCGCGTAAAATAGGATTTAGCAA
GAAGTCCT Run BLAST on NCBI transcript from alignment at sc0000028:671131..673712+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00003445 ID=TCONS_00003445|Name=TCONS_00003445|organism=Clytia hemisphaerica|type=transcript|length=2582bp|location=Sequence derived from alignment at sc0000028:671131..673712+ (Clytia hemisphaerica)
GTTATGTCCTTCAAAAAAGAAAGCTTTCAAATCAACCTGGGTATCAAATA
ATGGAATGGGTAAAAAACTAAAACATCACGAAAATATTGGATCAAAGTTG
GCTTCGAATGAAAATGCTCTCTAATATGACGTTCTACCTTTCGATAAGTC
ACTGAGGGTTTTCGCTCCCGTCTTGTTCGATTTCTAGCATGTAAAGAGCT
ACATACCAGGCAAGTATACCAGAGCTTTTGAGATGTTTTAAGTAAGGGAT
CGTAAGTagtcagaaaaaataaaaaataaaaatgataattagaaaaaaaa
aatgaaaaaacaaaaattaatgataataaaaaatagtttcttttttaaaa
ctCAAGTTGTTACTCTTTTTTAAAGAANAGCGAAAGCGATATTGAAATAT
CTTAAGAACGTCTGACGAAATGCATTGGTAGAATGAACTGATCAATTATT
GTCAAAGTGAGAGAAATGAATTgggttcttccagaaaaaagACCGTTCAt
agggggtggaagatataTTTCCAGGGGTATCGAAAAGATCCTGAAAAACT
GCCATCTCCATGGGGTGaatttgcaatgtccagggggtaaatttgcaatg
tccaggggatCGATTTGATGCTTGTGGTAAAAcgcgtgtccagggggtga
aaaatcgaaatgtcctggggtagatcattgaaaaaataatatatcctcca
cccccatgaacgatttttttctggaagagacaattgattgaaaaaatatt
ggctgggaaaaaaagatcataagaaaaataattggtATGTGATgtgcttt
ttctttctttttgagtATAAAGTaacgaaaaaactttttcaaaattataa
gttaaaaaatgaaatgttATTCTGttgtgaacaaaaaaaaaataaacgaa
CTAAATCCAAAGAATAACAGAAAACGAGTAATGGCCTAATAAAAACACGA
AATGCAGGAACGATTTTCCCGTTTCAAGCTGAAGGCTAGAGATGAATCTG
CAACCTTTCTTTGACAAACCAAAGTTAAACGTTAAATTTGCACCACATTT
CGGATGGTGAGGGATTGAATCTAGCTCttcattgttttttcttcattgtc
aggttttacaattttcaaattttgttactAAATTGAAAACCATACGGGCT
GATGCAACTCAGGCAGGAAATATGTGGCTATCAATTCCTACAGAGTAGAT
TCAACTCAAGCCTTCGGCTATACCCTATTGGGGATGATAATCGACCTAGC
CTTTTATTTCTCATTGAGATTTTAAAGAACAAATGGTTTTCCAATAAGCC
GACAACATTCGCATAGCATACACAATGACCTTTTATCTCAATACATCAAT
TTTTTGTACCCAACTTTATGTCCAAGGTTATGTCCTTCAAAAAAGAAAGC
TTTCAAATCAACCTGGGTATCAAATAATGGAATGGGTAAAAAACTAAAAC
ATCACGAAAATATTGGATCAAAGTTGGCTTCGAATGAAAATGCTCTCTAA
TATGACGTTCTACCTTTCGATAAGTCACTGAGGGTTTTCGCTCCCGTCTT
GTTCGATTTCTAGCATGTAAAGAGCTACATACCAGGCAAGTATACCAGAG
CTTTTGAGATGTTTTAAGTAAGGGATCGTAAGTagtcagaaaaaataaaa
aataaaaatgataattagaaaaaaaaaatgaaaaaacaaaaattaatgat
aataaaaaatagtttcttttttaaaactCAAGTTGTTActcttttttaaa
gaattttgaaattcatatttcgttttgaATGAATTTCTTGCGTGCATAAA
TATAATTGGAAGATACGTTGTTTTTAAAATGGGTATaataatattatatt
attttggtACTGTGTAAGACCCACACCCTGATTTTATTTATACATCCCTA
AGTTGAAGGGCGGGAAATCTAAGAGCGCTGTTTACCTTCACCTGAGGTCA
GAACCAGCCGCTTTCCACCTTCACGTCTCGCGGTTTCTTTCGTGCTTGAA
AATACAGCATGAGTAAATAGCTTTGCATTTAGGTATGGTCATGATTGATA
GAGCCGTTTGCGATCACGGGTGGTTTTTCCTCAATACTATTATTTCGGCT
ACCGGAGTTTTTAAAAGATGATATCAAAACTCCGGTCGTATTGTTCGCTT
GTCCTTTTGAATGATTTGAACGAGTTTCTAATGAATTTTGTCCGATATTA
GTTCTATTATTCAAGGGAGAAGACCCAAGAGTTGTTGTTGAATTCGGAGG
TGTCGTTCCGCTGTTTCGATTTTCATTCCGGTTATTATCGAAAGACGTTT
TCCGGCTGTTATTACCGCTGGTCGGTGGGTGTATGTGTCGGAAATCACCG
GATAATTTGCGTTCTTTATCTTCGACGATTTTCTTATGAATTTCTTGGTG
CAGTCTCTTATCGAATTCACGACTGAGTTTACGGCTGATATCTCTGTCTA
ATTTCCGTTCGAAATCAGGCGTAAATTTCTTTTCTTGCTTCTCCTGCGTT
CGTTGCTTCTCTTCTTCCATTTTACGACCCATCTCGACGTAATATTCGAA
TGCGCGTAAAATAGGATTTAGCAAGAAGTCCT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00003445-exon-sc0000028-1491911889:671131..671364 | TCONS_00003445-exon-sc0000028-1491911889:671131..671364 | Clytia hemisphaerica | exon |
| TCONS_00003445-exon-sc0000028-1510915933:671131..671364 | TCONS_00003445-exon-sc0000028-1510915933:671131..671364 | Clytia hemisphaerica | exon |
| TCONS_00003445-exon-sc0000028-1575043694:671131..671364 | TCONS_00003445-exon-sc0000028-1575043694:671131..671364 | Clytia hemisphaerica | exon |
| TCONS_00003445-exon-sc0000028-1491911889:672739..673712 | TCONS_00003445-exon-sc0000028-1491911889:672739..673712 | Clytia hemisphaerica | exon |
| TCONS_00003445-exon-sc0000028-1510915933:672739..673712 | TCONS_00003445-exon-sc0000028-1510915933:672739..673712 | Clytia hemisphaerica | exon |
| TCONS_00003445-exon-sc0000028-1575043694:672739..673712 | TCONS_00003445-exon-sc0000028-1575043694:672739..673712 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000028 | supercontig | sc0000028:671131..673712 + |
Blast
The following BLAST results are available for this feature:
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