|
|
Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00003416 ID=TCONS_00003416|Name=TCONS_00003416|organism=Clytia hemisphaerica|type=transcript|length=69bp
TAGCCTATTTAggataaaaggaagaaaaaTTTGAGATCCGCGTCGAAATT
TGCATgaatttgagtaatt Run BLAST on NCBI transcript from alignment at sc0000028:353891..355939+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00003416 ID=TCONS_00003416|Name=TCONS_00003416|organism=Clytia hemisphaerica|type=transcript|length=2049bp|location=Sequence derived from alignment at sc0000028:353891..355939+ (Clytia hemisphaerica)
TAGCCTATTTAggataaaaggaagaaaaaattgatttattgaaaacacac
ttttttaaaaataagaatacactttataagaatgtccatgatgaaaatgg
tcaaaaaattaagaatatcaccatcatagaattttgctactgaagctaag
gggtcactcacatatcgatgcttcccacgactaacgtcaaattgacgcta
atttgaaaaccccccacccccacctcttaacgtcaaggtttaaaaaatat
aaaaaatcgatgaaactctctccttcactttcatcgatgttttgtcagcc
atctttaattttgctATGGCTtgctcagtttacattttaaaaataatgga
gataatttctaaactttttttcggaaagtTGCTGGAATTAATTTATCTCT
GTAATCATAATCAACAGAATAGCagcatttcacaaaaaaaagacTGACCG
TTGGCAAAATTTAAGGGCCACGTGGATCatctaaacaaaaggaacactag
acataaacatcgggccgtttgttttggttaaaattgttctataaaATAGC
GAAGCGAACGAATACTTAGGTATATAAAATCAGGAAAAGAAATAACATCT
GTCACAgaataaacgtctcaaaaatccatatttctggtgaaatttcttag
caTTGCAGACTCTAACCCCCACCCCTTTGCGTCAATTTGATGTTAGTCGt
gagaagaatcgatatgtgagtgacccctaagaatgccattaagaacattt
tcaattataaattgtcaattatccccaagtaaGGAAAGGAGTGAGTTTCA
CAAAAgtttttatgcttgagacgtatttactaaatattaaatctaatctg
aattaggatcctaaaacctaagaatgctgtatgaatattttaggatgatt
ttcccaaaaaacttAAGAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNggacagacgaacgaacg
aacgaacgaacgaacgaacgaacggacatgggttaatttataggacctcc
accggggcacccggaggtaggtccaaaaataatggagataatttctaaac
tttttttcggaaagtTGCTGGAATTAATTATCTCTGTAGTCATAATCAAC
AGAATAGCagcatttcacaaaaaaaagacTGACCGTTGGCCAAATTTAAG
GGCCACGTGGATCatctaaacaaaaggaacactagacataaacatcgggc
cgtttgttttggttaaaattgttctataaaATAGCGAAGCGAACGAATAC
TTAGGTATATAAAATCAGGAAAAGAAATAACATTTGTCACAgaataaacg
tctcaaaaatccatatttctggtgaaatttcttagcaTTGCAGACTCTAA
CCCCCACCCCTTTGCGTCAATTTGatgttagtcgtgggaagaatcgatat
gtgagtgacccctaagaatgccattaagaacattttcaattataaattgt
caattatccccaagtaaGGAAAGGAGTGAGTTTCACAAAAgtttttatgc
ttgagacgtatttactaaatattaaatctaatctgaattaggatcctaaa
acctaagaatgctgtatgaatattttaggatgattttcccaaaaaactta
agaatatccatgatgaaatggatttacaccgttcttataaaacaaaaagt
agtgTAAACTTTGAGATCCGCGTCGAAATTTGCATgaatttgagtaatt
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00003416-exon-sc0000028-1491911889:353891..353919 | TCONS_00003416-exon-sc0000028-1491911889:353891..353919 | Clytia hemisphaerica | exon |
| TCONS_00003416-exon-sc0000028-1510915933:353891..353919 | TCONS_00003416-exon-sc0000028-1510915933:353891..353919 | Clytia hemisphaerica | exon |
| TCONS_00003416-exon-sc0000028-1575043694:353891..353919 | TCONS_00003416-exon-sc0000028-1575043694:353891..353919 | Clytia hemisphaerica | exon |
| TCONS_00003416-exon-sc0000028-1491911889:355900..355939 | TCONS_00003416-exon-sc0000028-1491911889:355900..355939 | Clytia hemisphaerica | exon |
| TCONS_00003416-exon-sc0000028-1510915933:355900..355939 | TCONS_00003416-exon-sc0000028-1510915933:355900..355939 | Clytia hemisphaerica | exon |
| TCONS_00003416-exon-sc0000028-1575043694:355900..355939 | TCONS_00003416-exon-sc0000028-1575043694:355900..355939 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000028 | supercontig | sc0000028:353891..355939 + |
Blast
The following BLAST results are available for this feature:
|
