TCONS_00003410 (transcript) - C. hemisphaerica

Overview
NameTCONS_00003410
Unique NameTCONS_00003410
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1267

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00003410 ID=TCONS_00003410|Name=TCONS_00003410|organism=Clytia hemisphaerica|type=transcript|length=1267bp
tttagaGTTATCGTAGAAAGacaaaaaataatacaaaaatgaaacacttg
caaacttttttgttgttgatagCATGCTCAACAGTTTATACAACAACAGA
TCAACAAAAACAGTCTCATGttgaatttgatgaagaattagAAGATTATC
CTCCACACGATCCCATAATGCAACCCTTTGATGAACCTTATGAAGATGAA
CTCAAATTTGAAGAAGAACGAGTGAAGAGCCAACATCATTCCACAAAGCC
AAAACAAGATTCAGAAGAAGAACCAATTCAATCATATGGCGCCGTAGAAG
AAGACACAGACCAAGATAAGAcattccgatttcccgattacCCCGATAGT
GAGGATGATGACCACGAACCGGTTTACCAACCCGAAGACCCGGGAGAAAT
ACCGTATTCCCAATCAGatgagaaaatattaaaacaagAATCGAATACAA
ACGTAAAAAAGACTGGAGATGAGAAACAAAAAGaccaaaaagaagaagaa
gaagaaattcaaacttATGGAGAACCGAACAAAGTTGAAGAAGGTGTTAA
AGAACATTctaaacaacaacaacaacagactCAACATAATGTTTATGACG
CTGAAGATGATCATGAACCTGTCTATCAACCAGAAGATCCTGGAGAACTT
GGCAATGATGTCGGTAATATTGGAGTAAATGGAATTGGTGATGGTGGTGA
TACTATTGTTGTGAATGATGATGTTGAAATTGAAGTCCATGATGAGTTGT
AAAAAGATGAAGGTATATTTTGgtgtattgtgttTAGTGATCACTGATAA
AATATCATAACACTTCTTGTGGTGGTgagaaaattgattaatgtTTGGGA
TATTTCAATGCTGGGTTTTACTTTTCGTATCTATATAGCGTTAGGAACTA
AGATTATACTTAAGTCAGACCCTGATTAGGATTCTTGTACTGCAAGCATT
TAACTGCCTTCCTTTCGTCCGAATTTAATCAACACACGCATTATTAAAGT
TAGTTGGATTAAGAAAAGAGAAATGAAGATTTATTTTTTCTACTGGAcca
ataatcaaataaattttattttacgtGGAAACTATGAATTTCGCTGATTT
caattgtattttcattttttattttatcaaaagctAGAGCCCTTCAAAGT
GGGCTAATTTTGCTCGTTTTTTGGGCCATTTTAGCTTTTACTTTGAAGGA
CTGTATCTTTTGCTCCTAGAAAGAAATGAACATTGTGAATACATAATTGA
AATCGACGAAGCTCAAA
Run BLAST on NCBI

protein sequence of TCONS_00003410-protein

>TCONS_00003410-protein ID=TCONS_00003410-protein|Name=TCONS_00003410-protein|organism=Clytia hemisphaerica|type=polypeptide|length=237bp
MKHLQTFLLLIACSTVYTTTDQQKQSHVEFDEELEDYPPHDPIMQPFDEP
YEDELKFEEERVKSQHHSTKPKQDSEEEPIQSYGAVEEDTDQDKTFRFPD
YPDSEDDDHEPVYQPEDPGEIPYSQSDEKILKQESNTNVKKTGDEKQKDQ
KEEEEEIQTYGEPNKVEEGVKEHSKQQQQQTQHNVYDAEDDHEPVYQPED
PGELGNDVGNIGVNGIGDGGDTIVVNDDVEIEVHDEL
Run BLAST on NCBI

transcript from alignment at sc0000028:97859..114910+

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00003410 ID=TCONS_00003410|Name=TCONS_00003410|organism=Clytia hemisphaerica|type=transcript|length=17052bp|location=Sequence derived from alignment at sc0000028:97859..114910+ (Clytia hemisphaerica)
tttagaGTTATCGTAGAAAGacaaaaaataatacaaaaatgaaacacttg
caaacttttttgttgttgatagCATGCTCAACAGTTTATACAACAACAGA
TCAACAAAAACAGTCTCATGttgaatttgatgaagaattagAAGATTATC
CTCCACACGATCCCATAATGCAACCCTTTGATGAACCTTATGAAGATGAA
CTCAAATTTGAAGAAGAACGAGTGAAGGTATGAATATGCTTCTTTTTTAA
GATTAAAAAACCTACAATCAGCGctaaaatacttggcacaaaagggaaat
tccccgtgaaattttataaccacaaacaacttggaagtgctctaaagtag
gttggaagggtagagttttaactctgagttttaacgttAGACTTAagtct
taggaccttaggatctgaggatccgaaagctcaaaaatggtctggtaggg
cttgaaatatagcctagaaaccaataaatccctcccagatcgaaattttt
gataaaaccaagttgaaggcccgaaattgaaattctcgctcgaacttcaa
ttttcgaacaATGGTAAAATAACCGAAATTGTcgatatgttatggcactg
attgtagctcATGATTACTCGATATTTCAACGCAAATAGACATTTCCAGA
AAAACTTTTTACCTTTTATTTTGAGAATATCATAATATACTTCCCTAAAA
ACTTAGAGGGGCGATTTCATGTAAAATGAGCAGTTCCATATCAATTCAGG
GGGTGGCCCTTGTCAAGctaaaaataattcttgaaaatgtgtggaCACCC
TGGAAAGAggcgaaatttgtaaatttccaaaaattctgcTTTAAAGGGTG
GACGAAGTAAAATCAGTCTCTTAATGGAAGTTTAAATTACCCCTCGGGAG
AACAAAAAAGCTTTCGTtgcaccccctggaaattcttcatCGGATTAACA
CCCTGGAAATGTTCCCCATCCCCGGTATAGATATAACATGGAATGGCTAA
ATCCACAGGTTCtcgtgaaaatgaaaaaaattatttcatgtCATGCATGT
TTTTCAATGAATTTTCTATTAGAGCCAACATCATTCCACAAAGCCAAAAC
AAGATTCAGAAGAAGAACCAATTCAATCATATGGCGCCGTAGAAGAAGAC
ACAGACCAAGATAAGAcattccgatttcccgattacCCCGATAGTGAGGA
TGATGACCACGAACCGGTTTACCAACCCGAAGACCCGGGAGAAATACCGT
ATTCCCAATCAGatgagaaaatattaaaacaaggtatttttattttttat
aatatttcaCTATGTATTACTTTTCATTCTGAATGTTCCCTACTCCACCA
caatattcttcttttttactggaacaatttcataaaaaacattaGGGTtc
aaaagagcaaaaaaataGCAGTTTGAAAATAAACCTGAGCCTGGAAAGAC
AGAATTTCAAGCAGTTTTCAGAGTTTTAAGGGTATTAATATTTTGTctta
aaaagcaaaaataataagaacaagGTGAGACTCAAAACGgcataaaaatg
agaaaagccTCGACATCATTAATTACcggttctttaatgacttaataaAG
AGAGTATATAACATCATAAATCTTTCCGGAAAAGTTTATTAAATCGGGTT
TCGTTACAGCACAAAGTTACGTATGTTGAggctaaaagataaaaaaatgc
cTAGTTTATTTGTGAACTAATATGAAGAATATGAACCACCCTTGGTGTCT
TTTCACTTTACTTCAAATTTACAACATAATGATTGGCTATTTTTCAGTAT
CATTTGGCAATTTATACCATGCTGGGCATGCATAATCATCATAGGCAACg
cttttactaaataatgtgaAGCCGCAATAATTTTTATGGTACTCCATACG
TCTTTGCCAATATTTGTTAGGCATCATACCTTCCAAAATGGCCATTTCAT
TATGGGCAACCTCGTACGCAGATTTCTTGTGTAAGATTGAAGCCAATCCT
CGTCCTCTCCATTTGGGATCAATAATTGTGCTCTCGATGCATAAAAAACG
GGCTATGTCCATCCTCTGTGTTAGTTTATCCATCAATTTAGTGTAATCAT
CGAAAAATTCGTTCCGTTGTTCAAGATATCCCCATAGTTTTGATTGTCTA
TCAATGTCACAGGAAGCTAACCACTGTTTGAATTCGGTCAATTCTCGTTT
GCATTTTTCTACATCTATGTAGTAATTGGTTTGGCATGCTCTTACTGTTT
CGTTCTCGTCCAATACCACCAAAGATAAACCATCTAAGTTAGAATTGTAT
GCTCCTTTTGGGTCAAGAATATACTCAATTGAAGCATGATCCTTTTGCTG
TTCAGCGGTAAGACCCATTCGTTTCAAATATACAGGTATCATGTATTTGT
CTAAAAGATTTTGAACTTCTTTCCCATGTTTGCTAATCTGATATCTCACA
ATGTTGTACATTTTCGAATCATTTGTATACTATAATACGACCAATAATTT
CACAAAATgatatattatatttcaaactCCAAAGCCACACACATTCCGTT
CAgtatttttaactttatttaTGTAGTTTTTTTCCTGTTTGTAATGTCAA
CAATAAAACGTATCATATTTTAATAAGAAACTCTTGAGAAACACTGTACA
AAGCTTAAGCTGATAAAGAAAATAATCTTTTGCAATACATTGATTTTAAT
CTCCAAAGGTCTAGAAGAGAATCATAATCTCGCTCAGCgttgaaaaagcc
ttaagttTTCAGATTTGTGGAGCAGaaatgcattgtaagggtaaactttt
tgatttcagcaacgaaaatttttttctctaaaagaaaagggttgaaattt
taataaaaatgcactgtgagggtatgaatttcaccgattttttgcTGTGC
ATGTCGTAAGTTGATAAACCCTCTGCCCCACCCTCCCTGGGCTCGAAATC
TTAATGCATAGGATGCTTTAGAATAATCTTAAAATTATAACCGCAAGTGG
TAgtaatatttcatccccccccgCCTTAGATCATGTTCAGATGTTACCGT
ACCGTTTCGCTCCGATACGATTCTctttacggatcgagtgtgttcatatt
gatttcggaacgtttcggagcaagaaagcggggcagttccgttccgatga
aaaaagtggagcgaaactgtttcgatctgttttgctttgtaattttgccg
ttcacacttgtttcggaaccgttaaCGGAaaggaacggaaccgtaacgtt
tGAACATGGTCTTTAGAGGGAACGATCAAAAGAGGGGTCTATCAATTTAG
GAGGACACATTTTTTTCAGTCAATTTTTGGAACAAGAACCTTACCCTATA
AAAGGGGTGGCTTCAAAACCAGGGTGTGGGATTTGAAGTGGGTGGAAAGG
ggattttattttcactttacATCTAGGGGAAACAGAACTCTGAATGCCAC
TCTGAAAGTACCAGTCAATACGCCTTAaacttaaaacctacaaaaaatag
AGGTATCCTCTATCTGATTTAAAGTGGAAgtgaggctgaaacttttttgt
gttgaaagtacgctGTTTATAGTTttcttcaaactgaaaattaagaataa
tgacAAAACTAAGTGACGAAATATTGAaccaaaaacaacaagaaaattga
CTGGAAATCTTGAGGAAATTGATCAAAATGACATTAAAAGTATAGTGAAA
ATCGCAAAAGAAATAGCgtggaaatataaaaaatatcaaaaataataaCT
CCAGACGCCTGAGCCAAATAGGCTGATGAACAGAAAAACACAGAGGCAAA
AGGCAGAAAACAACATACCAGGTAGCCAGTATGTAAAAACTGTGAAAAAC
TGTGCACTAAAGTTGAAAGTTGATGGAATTTGACTAATGAATAAAGTTTA
GACCAAAACTGACTAAGTCTGAAACTCCATATTGATTGATGCAACCACAC
ACAACGCTTCTCATAGCTTGATTGATGATTCATGATAATCGAGAGAGAAA
AACGCGTACttgaacaaaattgaaaatactagATAATTGCCTAAGTGTGA
ATAAACTAATTATATGACAAAAATGATACAAATAAACTTAAAATGACTAC
AACATAGAATTAATTGTCAAGAGACTGAACAGAAAAGTGACGTAAGACCA
AAACAAAGGACTCTGGACTGCACAAAAAGACACAAAAGGCGCTaaatgaa
ttaaatttttgaccatttttttaaTATACTAAAACCATCATGCATTACAT
Acttaatttctaatttttttctccatggttacaccccaaagaaatcgtaa
ggccctcaaagttctatttcaaaGCTCATTCATTATGGTAGTGGCCAATA
taatctgaaaatcgactttctcaaaacatggtcatattgcatacaaaaat
gtcacaaatttgatggagatttaggAAAAACATTGTAACATACGTCAAAA
ATGCCCTTACGGAAACTAAATGCTcgtattccattgaaaacgaatATTGA
ATGcattaaaatataataaaattctaggttcaaaactttgatgaatttct
aatTCATTGGGAATCAAAATGTATTTGAATTCTAGACTttaaatacatac
aaaatgtaTAATAAAAGATTACGCTGAACTTAAGTaaagaaaatacaatt
caaatgtTGTTTCAAGTAAATGCATTTTCCATTAACTGTTTTAAACGtag
taaaattatatttttaatgtgaaccacggattcactaaaataaaatgcCA
TTCAGATGCTCTCacaaataaaatgcattttttatttttttaaacgcatt
gaaactaaattttttcgatatggtcatgaatttgacaaaataaaatgcag
ttcaaatagttttacaaataaaatgcactctccattcgattttttaaacg
TATTGAAgctaaatttttcgatatcgTCTAAATCCGATAATAATAAAGTT
TTGACACTTCAAAGCcgtttttttatacaaaaacaggtgcaattgcatta
tgggcatgaaatcctgaaaaatacaaatattactttgggaatggatttct
agcaagtatttgatcaattgaatcacggTTCAGCAACTGAATTGCAACTT
CacagtttcagtaagttgtgaGTAAGGGTcaatgtttgtaggttttaagg
tgtattttgataatataacgtacagttttgaaaatattaggTACCAATGA
TAGCATTAAtaactttgcagtgaatcactgttcaaaatttgagaccaaaa
gaactattttataaaaagttatccaagaaaaccattttgtaaGTTTTAAG
GGGTAATTAGCTAAAACTGCATTTTCTGTTCTAGCTCTGATGGCATGTTC
TTCTAACATAGCTTTTAAAGCAACCCGATTGTCATAAATATGCCAGTTTT
GAATTATGATCATTGCATGGgtacctaaaaagtataggtttttttacctt
aaattcaattgtgtaatctCTTGGtctgaaaaacttgatttttgaaggga
tatttgaaaactttttgaataacttcgaattttatGAATGAAAGTACATT
TGTAAGAGGTTTTAATAAAGTGAATTATACTATATTACATTAAGTTTGGT
GGCTAAGAGAGCCCAAATCCAACTTTGTCGggtttaaggggtatgtggtt
ttaaggggtattcaCTTGTAACAATACAAAGTACAAATTTTCGTCATAGG
TAAATAAAAATGTACGATAATGTACCCTATCAATAACCAATTATATCAAT
AAACTCGGTGACGGACTGCTCCAAATCAGTTTGAAAATTATAtaccttta
accctattcaacctagggttttaggggtggttcagaactaggggggtgta
tacacgcttttttattataagaatggtgttttttaattttctcaacttca
gttgagctacaatctgacaatgtctgtgtgtgtgtctgtgtgcctgtctg
tcacaaaaactttagggcagcctggagacttcagaaatgcttggatttgg
ctgaaatttggcacacttgttccttgggtgaatatctgggggtgtttttt
tcatttttttttaattttgatttttggggcctgNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNgc
ctggggacaagtttttcgccaaaacgaggctaaaactttagggcagcctg
gagacttcaaaaatgcttggatttggctgaaatttggcacacttgttcct
tgggtgaatatctggggttttttcttcattttttttaaattttgattttt
ggggactggggacgagtttttcgccaaaacgaggctaaaactttagggca
gcctggagacttcaaaaatggtcggatttggctgaaattttgcacacttg
ttccttgggtgaatatctggggctttttttcatttttcaaaaatattgat
ttttggggactggggacgagtttttcgccaaaacgaggccaaaactttgg
ggcagcctggagacttcaaaaattgttcgatttggctgaaattttgtaca
ctgTTCCTTGGGTTAATATCTAGGGGTccttatttcatttttcaaaaatt
ttgatttttggggcctggggacgagttttttgccaaaacgaggctaaaac
tttggagcaGCCTACATGCCtcaaaaatgatcggatttggctgaaatttg
gcacacttgttccttgggtgaatatctgggggtctacaattgggcctatg
aataatttgaagccactgaagttNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNTAAATAATATTAAATAATATTAAATAATATTA
ATTTAATAGCCttaattttggccaaaaaagcGTATATTTTCGCGGGTACT
GAATTTTTCGCAAATcacgatttttttttctgagaaaCGTGTTTCACGAG
TACTAAATTTCGCTATTGCCACTTTCTGgaatttttcgcgtgtattaatt
tttgcgattcactaaattgaatatttttttaaaaaatggttaAGGCAACG
AAAAGACTGATTTGGCTTGAATCAAAATATCACTGATCCCTTAAAAATTC
ATCATCTcttctatttaaaaaaatttcgcgattttgtattttgaaaaaat
aaaacagtgctaaattacgcaaaattttgcataaaaactcgcgaaattaa
gtacacGTGGAAATTTAGTACCCGCGAAAATATATAAACTTAAAGTAACA
TCAGTTTCACTATACAAAAGCCCCAATGCAGAACAAGAAACCATCGTAAA
GGttcaatttttgagaatttttgaaCAGTAGGTTTTTACActtttccgaa
aagtgaattttgtcTTTGAAGCTCATAACTATAGAATAAGtggatcaaat
ttaaaaagtggtACCTCAAAgtaaggaaaatgaaaatggacaATAGgcaa
tttgtgtttttttgggttaatttttagaaaataatttatataaaaaagta
gtaaaaattaaTATAAAGAATCCAGGAtgagaaaattatttacaaatGTA
TACGTATAATTTGGAGATGACTTCACTACCAGAGTGAATCATCGTTGGTG
ACAATGCTGCAGACCTTGATGAGCAGAAACCATATTCCAATACAAAAGGT
GACAAGTGAGGTGTCATATAAGCTCCATGGTCTTCCGTTATCATGTTGAT
AAAAAAGAGCGTCTGACGTCGTGCTGACAGTGTTTTTGAATACTTTTGAT
GGACTTCTTCGTTGGGCAGAACTAAAAAATCAGAAGTAATTATGTTTAAT
GGAAAGAAATATTCACTAATCCACTCTTTGTAATAAAATGATTAAGAGGC
TAGAAATGTCAATATTGGTTGAACATATCTAGGAGCCGAGAGGATCATTC
GATCTATTCATCATTAGCTTAATTACCTTTTTTGTACTCTAGGAGTAACT
TTCTTGGTCTTGTCATTGTCTAGATCTGAATTCTTTGGTTGTTCTTGGCT
CAAATCGTTACCCTTTGCGTCTTGTGGCTTGGTGAGCTCTTTATTAATTT
GTGTAGCAATAGTCAATGTATTTGCTTCGATGTCGTTTGAAGCAATCTGT
TTTGGTTTTCTCTTgcgtttcctttgtttttgctTGCCCACTGCCTCTGT
CTCTTGAATGGTTTGCATTTGAGCAATTTTATGTTCATATTGTTCCTTGA
CCGTTTGCAAGTGTTCTTTGGTAGCCTCAAGCTTTTTATTGGTTTCAATC
TTCTTCATGCTATTCGAGTGGGCCTGAAGAGAAgtatttgaaaattaatt
ttgacaCAATCAAGACAGGTTACCTTCGTAACCTGCTTCCAAGATTGAAC
GCCTTCCGATCAGGCATTGTTCATAAGAAATTACTCGTTGCCCAAAGAAT
AGTCTTTCTTAGGGGATGAGCATTCCTAACAATCACCATCAATATCGATC
TCTATATCATACTGTTATACTCTTATGTGCTTAATTGTGTAGGGGGTATG
TGTTAGTCcacataaaaatcaacaaaatggggGGGGTCATAAATAAGTGC
TACTGacctgattttgctaaaaatccctaggaaaatgaaggtttttggcc
aattttgacGCCACTTCGTAGTATAAaggtcataaaatgggggggagggg
gtcattaTAACGTGTTATGGGttgattttttcccaaaaattacaaaatga
cCCCCCCCCTACAGTTAAGCACACAAAAGTAAATACTAATTAACAAGCAA
TCATtcaagcaaaaatgattttctcaGGGAATGACACAACATGACAAATG
AGTTCCTAAAGATTCTTTATTGATGCTGATCGATGGtaatttattaaaag
aaaaagctGAAATCCTACCTCTTCTCTGTAAGCATTACGTTCTCGGATCA
AAGATTCGATCCTCTTTTTTTCACGTTTCAAATCGTTCTGGATTTTCTCC
ATTGTGACCTTTTGTTTTTCGATAGTAGCTCGGTCtgcattttctttctt
cttgtgTGCAGAAATATCTTCCAAACGAGCGCGAATCTCGACTTCGCGTT
GGTTTAATCTCTTCTCCAAACGAAGCACACTTTTCGATGCAGTCTCTAGT
TTCTTCTCGCAGattgctttttctttttgtaagaaaGCAATCATCAATTC
AGATTCTTCCAGGTTGCCATCTTTTGCAGCCAATGCCTCTTGGTGCATCG
AATCCATCTGCCTGGCTTCTTTCTTCAACTTCTCAAGCTGTTCCTTAGCT
TCACCAATCTCGTCCATGTGCGCGTCTTTCACACGGAGCAATGCCTCATA
TCGTTTTGCAATTTCTGCCGCATGGATTAATTCAGATTCGACTTGCGCTA
ATTTCAATGCATCATTCTCTGCCTTTAGCGATCCCATACTTTGTTCCTTG
ATGTTGATTTGCTCTTTAAAGCAGTTGCACATCTTGATCAACTCGCTCTC
TTTTCGTGTCATTTCCTCAGTATGTTTCTTACGATCTTCCTCGTTATCCT
TTATCAATTCCTTATTAATCGCCTTCAGATCATCCAGCTCCTGTTGTTGT
TTGTTAAACACTTCTTGAGTCTGGGCGACCTTATCGTTCACTTCCCTGAC
CTCTTTGGTAGCCTTAAACAATTTCTTCTTGATGACAGCCTTCTTGTCAT
TTAATTCTACGATCTGAGAGGCCTGGGCATTAACTAACTCTGTTTGTCGC
TGTAAGGAGTGTTGTGTATCAAGGAGTAATTTTTGTTCGGCGTCCAAACT
TTTACGAAGCCCTTGAATAGTTTCTTGGTTAAGCTCCGATTTCTCTTTTT
CAATAGAAAGCATTCTTTCCAAACGTTTGGCTCCTTGTTCGTTGACGGCA
GCTAGCTCcctctcaaaatatttttttatttcatagaTCTGAGCGTCCTT
ATGACAAATTTCAGCCTCCTTTTCTGCCAGAAGGACTTGGTTGTGCTCTT
TTTCGGCGGTCAATAATGCGTCAAAGTGTTGTTTCAACTGTAAGGTAGTA
TCGGCAACACATTCTTTGATATCCNCTCGCAGattgctttttctttttgt
aagaaaGCAATCATCAATTCAGATTCTTCCAGGTTGCCATCTTTTGCAGC
CAATGCCTCTTGGTGCATCGAATCCATCTGCCTGGCTTCTTTCTTCAACT
TCTCAAGCTGTTCCCTAGCTTCACCAATCTCGTCCACGTGCGCGTCTTTC
ACACGGAGCAATGCCTCATATCGTTTTGCAATTTCTGCCGCATGGATTAA
TTCAGATTCGACTTGCGCTAATTTCAATGCATCATTCTCTGCCTTTAGCG
ATCCCATACTTTGTTCCTTGATGTTGATTTGCTCTTTAAAGCAGTTGCAC
ATCTTGATCAACTCGCTCTCTTTTCGTGTCATTTCCTCAGTATGTTTCTT
ACGATCTTCCTCGTTATCCTTTATCAATTCCTTATTAATCGCCTTCAGAT
CATCCAGCTCCTGTTGTTGTTTGTTAAACACTTCTTGAGTCTGGGCGACC
TTATCGTTCACTTCCCTGACCTCTTTGGTAGCCTTAAACAATTTCTTCTT
GATGACAGCCTTCTTGTCATTTAATTCTACGATCTGAGAGGCCTGGGCAT
TAACTAACTCTGTTTGTCGCTGTAAGGAGTGTTGTGTATCAAGGAGTAAT
TTTTGTTCGGCGTCCAAACTTTTACGAAGCCCTTGAATAGTTTCTTGGTT
AAGCTCCGATTTCTCTTTTTCAATAGAAAGCATTCTTTCCAAACGTTTGG
CTCCTTGTTCGTTGACGGCAGCTAGCTCcctctcaaaatatttttttatt
tcatagaTCTGAGCGTCCTTATGACAAATTTCAGCCTCCTTTTCTGCCAG
AAGGACTTGGTTGTGCTCTTTTTCGGCGGTCAATAATGCGTCAAAGTGTT
GTTTCAACTGTAAGGTAGTATCGGCAACACATTCTTTGATATCCAAGCCC
ATATTTTCAACCTCTTCACGGGCCATtatcaattttttattcaaaccaTC
AATTGTAGTACGCAAAGCATCCGCCTCTTCACGATTCGCGAGATCGGATT
CTTCTTTGGCTAAAGATAATCCCCGGATCTCTGTTTCAGCTACTGTGCTT
CTTTCCACAATGCTGTCGTAGTCACCTTTCATTTTACCGTAATCAACTTT
AATTGAACGAAGTTCGTCCAAAAGAGCTAAATCATTTGCTGGAGAAATAT
CTTTACTTCCCTTTACTTTTGTATCGGCTTCGCTATCGTTTGAAGGAGTA
TTTATGCCTTTTCTTCCTCCTACGCATGCACCTTCCCGTATCTTTTCTTC
ATTCTGGACTTTGATGGTATTTTGATAAGTCTTCATCGCAATGCCGAATT
CCAGTGGGCCGACGTTCAACTCCTTCATAATCTATAACAAATGTGAATGA
TATTAAGTCCGAATTTCCGGCTGAACCAGCCCATAAAAGGACTGAGCTCT
AAATTCACTAACTGAGGCCACACCTTGGTCAGGGGTAACGAAATGCATCA
GTGTTTGCATTGACTAATGTGATAGTTACCTCAAAGCGAAAAACAGTCTt
tataaaaattgtatattgAATAGCAAACATGGTCCTGAATAAGACGGCAG
TTTTACTAGAAAAGAACCCTTGCGCCCAAAGTAGGTGAAGATTGCGTGGT
TGCCCCTCTTGAGCAGATGACTGTTGTAGTAAGGGTAGAAAATATGGTAT
TTAGCCAGAGCTATTAGAGCTAGAGTAGTCTTTGCTTCCGGAtatatgaa
aattgtaaagcAAACCTTTCTTTGAAGCGATTCTTTATCATCGGTAACAA
TGTATGGCTTTGTGTTTCGGCCACCGTAAAGTTTGTCGGGAAGAGAAACA
TCCTTGTAACTGATTAATGTTTTATTGATCTGACACAATTGGTCGTCTTC
TGGTGTATTAACACGACCGTCTGATTGAAAACTTTGCATTTGAATTTCAC
CACGATAAAAGCCCTTTGAAAGTCTTGCTTTCGAAGATTTCTTCAGATCT
TCCGCCATCAATGATGTAGCGCGCCACcacatcttttaaaaaattttcgt
tGATAAATATTTTCCACGTCTATCCAATTcacaatgaaaaatttaaatga
atttcTTTCTTGGTGgctatgtttaaaaaaagaaaacttttgtaaaatta
tatttgacgtcaaaagttAGACGTCAGCTGACGTTTTCACGATGGCTTTC
TCTATCTGCCATTCCGATggtggattggcggccgcccacgctctAAAGAG
GCGGGCCTATATCACCACAGAGAGCAATGAAATTCGGCCGATCATCCCTT
GGTGCTCTGCGTTACTATCTGTTAGCCTTGTGAGCTAACAAAATGTTGTT
CTGGGGGTGTGATAAATGTAAGAATTTGTAACTACGGTTTTCTTATGTCT
TTACTCTATGAACTCCGATANNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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aacaatcctttgttattgaatctattgtttaatttatatcatgtttagat
gtttcaaacaattaattcctttcaaaattttttaatatggcagcttataa
tcggtacaaaaagtcttttgaaatagctctattataatgaagctctattt
cttactcctcgtgctttaacacgtggtaatttatatctttgtttatcttt
gtaatcatacatgatcaatctaagtatcaatcagattcgtgctccctggt
cagtaaaatgtgattctatgcattcattttcggtatttctattctggtct
gtaaaatatttaggtatcccacaacctagcccaattggctaNTTGAGTAA
TCTGCTTCGTCTGGCACAGATTTTTCAGATATCACTGCTTGTATGATTGA
ATGCTTGTTTGAAAGCGGTTGTTTGTTTGAATCTGTATATTTGTTTAGAA
ACAATTACTTTGTTATCTAATCTATGTTGAGATAATTTCTCGATTGTTTA
TGTTTACCTCATCTTGGGTACAATTTCTCGAAACATCTAGACAATATTCc
gtttgtttgctttgttttcaaaacttttcagctTNAACAGTTGCAATATG
TTATGTAATAAACTGCGCAATTATTCATATGCTCATAATTGTACTTCTTA
TCTTTGTTCTCATCAGAATTTTGATGCTTTAGTTTCTTGATGAAGATAGT
TCAGATTTCTCTTGTCGAGTCTCTTCTCGAGTTCCGCATGATTCACCTTA
CTTTTAAGAATCTGATAACGCATAATTATCTTGGAAAGCTATTACTGCGT
TTCTCTGCGTTTTACAACNGTTTCTTCTTCTGTGATGAGATTTTGAATTT
AGTCAAGTTATTCGCTTAACTACTTCCTCACATTCAGCATGTGTTCATGC
TTGATTCATTGATTTTAATTTAAATcttctaattttattttaatttttct
ctcaTTTTGCGTATAATATTTCTCNNNNNNNNNNNTGTTAGCCTTGTGAG
CTAACAAAATGTTGTTCTGGGGGTGTGATAAATGTAAGAATTTGTAACTA
CGGTTTTCTTATGTCTTTACTCTATGAACTCCGATattaatctattttca
atatattCCCTAGATCCAATTATCTCTAGGACCTGATAGCTATATCAACA
ACCTTGCGCATAATGATGCCCAAGGTGTGTTGATATTCGCTAGCATAGCT
AACAGCCCCGTTNTCAACAACCTTGCGCATAATGATGCCCAAGGTGTGTT
GATATTCGCTAGCATAGCTAACACTATCGGAATCATTTCGTCGCACACAT
GACTAATAGTTCAATCTAAAAATTAGTGCCtttcataaaaaattcccgAA
AAACGCActttttctggattttctaGAGATTTTAACACAAGTTcttcctg
attttttgtacatacaTACGTATAAGTACTGCCATCAATGTGTCGAAAAG
TGTTTTCGAGGCGTCAATAAAAAGGGAAAATGAGAATTCGTGTTGGCCTT
GTGTCACTATCTTTGATTAATGATTTTCACTATTTAGAATCGAATACAAA
CGTAAAAAAGACTGGAGATGAGAAACAAAAAGaccaaaaagaagaagaag
aagaaattcaaacttATGGAGAACCGAACAAAGTTGAAGAAGGTGTTAAA
GAACATTctaatcaacaacaacaacaacaacaacaacaacaacaacaaca
acaacaacaacaacagactCAACATAATGTTTATGACGCTGAAGATGATC
ATGAACCTGTCTATCAACCAGAAGATCCTGGAGAACTTGGCAATGATGTC
GGTAATATTGGAGTAAATGGAATTGGTGATGGTGGTGATACTATTGTTGT
GAATGATGATGTTGAAATTGAAGTCCATGATGAGTTGTAAAAAGATGAAG
GTATATTTTGGTTTGCTGGTTatgcaccttttcgaccgtagtcgtcaatt
gccgcgcgggcattcttttgtccgttttaccaccatccaatcctttttta
cacttttttctattgtcattaggtgcgaaaaaaagactgggacggtttta
gggtggtaaacggacaaaaaaatgcccgcgcggcaattggcggctacggt
cgaaaaggtgtattgtgttTAGTGATCACTGATAAAATATCATAACACTT
CTTGTGGTGGTgagaaaattgattaatgtTTGGGATATTTCAATGCTGGG
TTTTACTTTTCGTATCTATATAGCGTTAGGAACTAAGATTATACTTAAGT
CAGACCCTGATTAGGATTCTTGTACTGCAAGCATTTAACTGCCTTCCTTT
CGTCCGAATTTAATCAACACACGCATTATTAAAGTTAGTTGGATTAAGAA
AAGAGAAATGAAGATTTATTTTTTCTACTGGAccaataatcaaataaatt
ttattttacgtGGAAACTATGAATTTCGCTGATTTcaattgtattttcat
tttttattttatcaaaagctAGAGCCCTTCAAAGTGGGCTAATTTTGCTC
GTTTTTTGGGCCATTTTAGCTTTTACTTTGAAGGACTGTATCTTTTGCTC
CTAGAAAGAAATGAACATTGTGAATACATAATTGAAATCGACGAAGCTCA
AA

Coding sequence (CDS) from alignment at sc0000028:97859..114910+

>TCONS_00003410 ID=TCONS_00003410|Name=TCONS_00003410|organism=Clytia hemisphaerica|type=CDS|length=2856bp|location=Sequence derived from alignment at sc0000028:97859..114910+ (Clytia hemisphaerica)
atgaaacacttgcaaacttttttgttgttgatagCATGCTCAACAGTTTA
TACAACAACAGATCAACAAAAACAGTCTCATGttgaatttgatgaagaat
tagAAGATTATCCTCCACACGATCCCATAATGCAACCCTTTGATGAACCT
TATGAAGATGAACTCAAATTTGAAGAAGAACGAGTGAAGAGCCAACATCA
TTCCACAAAGCCAAAACAAGATTCAGAAGAAGAACCAATTCAATCATATG
GCGCCGTAGAAGAAGACACAGACCAAGATAAGAcattccgatttcccgat
tacCCCGATAGTGAGGATGATGACCACGAACCGGTTTACCAACCCGAAGA
CCCGGGAGAAATACCGTATTCCCAATCAGatgagaaaatattaaaacaag
AATCGAATACAAACGTAAAAAAGACTGGAGATGAGAAACAAAAAGaccaa
aaagaagaagaagaagaaattcaaacttATGGAGAACCGAACAAAGTTGA
AGAAGGTGTTAAAGAACATTctaaacaacaacaacaacagactCAACATA
ATGTTTATGACGCTGAAGATGATCATGAACCTGTCTATCAACCAGAAGAT
CCTGGAGAACTTGGCAATGATGTCGGTAATATTGGAGTAAATGGAATTGG
TGATGGTGGTGATACTATTGTTGTGAATGATGATGTTGAAATTGAAGTCC
ATGATGAGTTGTAAatgaaacacttgcaaacttttttgttgttgatagCA
TGCTCAACAGTTTATACAACAACAGATCAACAAAAACAGTCTCATGttga
atttgatgaagaattagAAGATTATCCTCCACACGATCCCATAATGCAAC
CCTTTGATGAACCTTATGAAGATGAACTCAAATTTGAAGAAGAACGAGTG
AAGAGCCAACATCATTCCACAAAGCCAAAACAAGATTCAGAAGAAGAACC
AATTCAATCATATGGCGCCGTAGAAGAAGACACAGACCAAGATAAGAcat
tccgatttcccgattacCCCGATAGTGAGGATGATGACCACGAACCGGTT
TACCAACCCGAAGACCCGGGAGAAATACCGTATTCCCAATCAGatgagaa
aatattaaaacaagAATCGAATACAAACGTAAAAAAGACTGGAGATGAGA
AACAAAAAGaccaaaaagaagaagaagaagaaattcaaacttATGGAGAA
CCGAACAAAGTTGAAGAAGGTGTTAAAGAACATTctaaacaacaacaaca
acagactCAACATAATGTTTATGACGCTGAAGATGATCATGAACCTGTCT
ATCAACCAGAAGATCCTGGAGAACTTGGCAATGATGTCGGTAATATTGGA
GTAAATGGAATTGGTGATGGTGGTGATACTATTGTTGTGAATGATGATGT
TGAAATTGAAGTCCATGATGAGTTGTAAatgaaacacttgcaaacttttt
tgttgttgatagCATGCTCAACAGTTTATACAACAACAGATCAACAAAAA
CAGTCTCATGttgaatttgatgaagaattagAAGATTATCCTCCACACGA
TCCCATAATGCAACCCTTTGATGAACCTTATGAAGATGAACTCAAATTTG
AAGAAGAACGAGTGAAGAGCCAACATCATTCCACAAAGCCAAAACAAGAT
TCAGAAGAAGAACCAATTCAATCATATGGCGCCGTAGAAGAAGACACAGA
CCAAGATAAGAcattccgatttcccgattacCCCGATAGTGAGGATGATG
ACCACGAACCGGTTTACCAACCCGAAGACCCGGGAGAAATACCGTATTCC
CAATCAGatgagaaaatattaaaacaagAATCGAATACAAACGTAAAAAA
GACTGGAGATGAGAAACAAAAAGaccaaaaagaagaagaagaagaaattc
aaacttATGGAGAACCGAACAAAGTTGAAGAAGGTGTTAAAGAACATTct
aaacaacaacaacaacagactCAACATAATGTTTATGACGCTGAAGATGA
TCATGAACCTGTCTATCAACCAGAAGATCCTGGAGAACTTGGCAATGATG
TCGGTAATATTGGAGTAAATGGAATTGGTGATGGTGGTGATACTATTGTT
GTGAATGATGATGTTGAAATTGAAGTCCATGATGAGTTGTAAatgaaaca
cttgcaaacttttttgttgttgatagCATGCTCAACAGTTTATACAACAA
CAGATCAACAAAAACAGTCTCATGttgaatttgatgaagaattagAAGAT
TATCCTCCACACGATCCCATAATGCAACCCTTTGATGAACCTTATGAAGA
TGAACTCAAATTTGAAGAAGAACGAGTGAAGAGCCAACATCATTCCACAA
AGCCAAAACAAGATTCAGAAGAAGAACCAATTCAATCATATGGCGCCGTA
GAAGAAGACACAGACCAAGATAAGAcattccgatttcccgattacCCCGA
TAGTGAGGATGATGACCACGAACCGGTTTACCAACCCGAAGACCCGGGAG
AAATACCGTATTCCCAATCAGatgagaaaatattaaaacaagAATCGAAT
ACAAACGTAAAAAAGACTGGAGATGAGAAACAAAAAGaccaaaaagaaga
agaagaagaaattcaaacttATGGAGAACCGAACAAAGTTGAAGAAGGTG
TTAAAGAACATTctaaacaacaacaacaacagactCAACATAATGTTTAT
GACGCTGAAGATGATCATGAACCTGTCTATCAACCAGAAGATCCTGGAGA
ACTTGGCAATGATGTCGGTAATATTGGAGTAAATGGAATTGGTGATGGTG
GTGATACTATTGTTGTGAATGATGATGTTGAAATTGAAGTCCATGATGAG
TTGTAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_001904XLOC_001904Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00003410-exon-sc0000028-1491911889:97859..98085TCONS_00003410-exon-sc0000028-1491911889:97859..98085Clytia hemisphaericaexon
TCONS_00003410-exon-sc0000028-1510915933:97859..98085TCONS_00003410-exon-sc0000028-1510915933:97859..98085Clytia hemisphaericaexon
TCONS_00003410-exon-sc0000028-1575043694:97859..98085TCONS_00003410-exon-sc0000028-1575043694:97859..98085Clytia hemisphaericaexon
TCONS_00003410-exon-sc0000028-1491911889:98931..99141TCONS_00003410-exon-sc0000028-1491911889:98931..99141Clytia hemisphaericaexon
TCONS_00003410-exon-sc0000028-1510915933:98931..99141TCONS_00003410-exon-sc0000028-1510915933:98931..99141Clytia hemisphaericaexon
TCONS_00003410-exon-sc0000028-1575043694:98931..99141TCONS_00003410-exon-sc0000028-1575043694:98931..99141Clytia hemisphaericaexon
TCONS_00003410-exon-sc0000028-1491911889:113846..113968TCONS_00003410-exon-sc0000028-1491911889:113846..113968Clytia hemisphaericaexon
TCONS_00003410-exon-sc0000028-1510915933:113846..113968TCONS_00003410-exon-sc0000028-1510915933:113846..113968Clytia hemisphaericaexon
TCONS_00003410-exon-sc0000028-1575043694:113846..113968TCONS_00003410-exon-sc0000028-1575043694:113846..113968Clytia hemisphaericaexon
TCONS_00003410-exon-sc0000028-1491911889:114008..114218TCONS_00003410-exon-sc0000028-1491911889:114008..114218Clytia hemisphaericaexon
TCONS_00003410-exon-sc0000028-1510915933:114008..114218TCONS_00003410-exon-sc0000028-1510915933:114008..114218Clytia hemisphaericaexon
TCONS_00003410-exon-sc0000028-1575043694:114008..114218TCONS_00003410-exon-sc0000028-1575043694:114008..114218Clytia hemisphaericaexon
TCONS_00003410-exon-sc0000028-1491911889:114416..114910TCONS_00003410-exon-sc0000028-1491911889:114416..114910Clytia hemisphaericaexon
TCONS_00003410-exon-sc0000028-1510915933:114416..114910TCONS_00003410-exon-sc0000028-1510915933:114416..114910Clytia hemisphaericaexon
TCONS_00003410-exon-sc0000028-1575043694:114416..114910TCONS_00003410-exon-sc0000028-1575043694:114416..114910Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00003410-proteinTCONS_00003410-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000028supercontigsc0000028:97859..114910 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
11.3341	9.25404	2.39196	1.41152	13.8828	11.1491	19.9607	20.705	10.0597	12.4605	8.28948	6.56581	6.42287	6.53125	6.66437	6.51844	12.6872	15.7131	6.38066	8.31815	9.88854	10.9117	13.5722	14.6811	9.75674	10.9569	18.8979	11.5318	9.37915	9.48003
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00003410 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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