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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00003335 ID=TCONS_00003335|Name=TCONS_00003335|organism=Clytia hemisphaerica|type=transcript|length=918bp
GTGTATGTTTTTAATGGACAGGGGAATTCCCTATCACGGTATATGTAAAA
ATTCCCTTTAAAGGAAATACCTGTAGGGAATACCCAGAGACACGAAAATT
CTCTATAAAAAGCAGAGTGTAATAAAATGTTGTTAAACTGTATCAGTTAT
AAGTTGAAGAAGCTCACTGAATAAgttgaaagaagagaaaattcTACAAA
AGGACCCACAAACCATAATCGAGGATGCCAAGAGAAGTCGTTACAAAGGG
AACCAACAATCAAGGCAACCACTACGTCATATACGACGACGGTGCTTTTG
CGTACAAAAATAGTAATGATGAAGGAAAGACAGATTCAACATATTTCAAC
AACGGTCGTGGACACGCCTTCTACCAAAATGCAGCCCAAAATATCAAAGT
TTATGACAATTTCAACCAAGGAACAAGAAAGGTCAGCCCAATCAAAGACA
ATAGTCAATAAACTTGCAAACTAATTTTCTACCGCATATTTCAGAAATAC
TCAAATTGATAATCTGGCAATTGAaatcaacaacaaaatcaaaatcacaA
TTTCTGACATACAGTGTTGCAATCACGGAAGAGAATAAATTGGAGAAGGG
GAACGTAAATTTTCTCAGCTAACACCCAATAACATCAAACCCTGGATACA
TAGACCCATGGACATGTTGACGAATTTCCCCTTGGATCTTATATCATTCT
CCATGCATTAGCAGGTGTTTCGTTCTAGAAGAGCCGACCAACTTTTCCTT
AAAGGCCGATCTCCACTTGGGCGCGCTGCGTttgcaccttttggcttcaa
tcctttttgctcgaaaaaaagattacgtcataaaaacgtAGCGCGcgctc
aaaagtaaagttgaacacatttcaactttttcaaccgttttttttttttt
ttttttttttttttttNN Run BLAST on NCBI transcript from alignment at sc0000026:330026..331488- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00003335 ID=TCONS_00003335|Name=TCONS_00003335|organism=Clytia hemisphaerica|type=transcript|length=1463bp|location=Sequence derived from alignment at sc0000026:330026..331488- (Clytia hemisphaerica)
GTGTATGTTTTTAATGGACAGGGGAATTCCCTATCACGGTATATGTAAAA
ATTCCCTTTAAAGGAAATACCTGTAGGGAATACCCAGAGACACGAAAATT
CTCTATAAAAAGCAGAGTGTAATAAAATGTTGTTAAACTGTATCAGTTAT
AAGTTGAAGAAGCTCACTGAATAAGTTGAAAGAAGAGAAAATTCTACAAA
AGGTAAGCGAAAATATCATAACACTTCTGTCTGAAGGAGCCATGGTCACG
CCCATTACAATATTGAAGGGGTATTGAAGGAAACAGGCTGAGAATGAGAA
AATAGCATTTTTTAATTCGATTTTTTTTTTTTGAGAATCAAGACAAAGTT
CCAGAAAAATACTTACATCATAACAGTTAGAAGACTTAGAAACACTCACA
AATATCTGTGGAAACACTTGAGAAAGTCAGAAAATCAATATACAAGATAG
GAAAGTACCGTAGATTAGTCTATTAGACTATTGGGACTATTGTATTATCG
ACATGTGTCCTTTAAGCTCTTCACAAAGTTTAACATGTAAGAAACATTTA
AAGGCTCAAAAGGCTGATTTCTTGCTTGGTAAAACTAGTTTCTTAAAAAA
AATGTGTATTGGCTTGACAGTAAGTGTAATTATACTTAGACCCTTAGAGT
AGTGGCTTTTTGGATATTGGGTTTTCTCTCATCAAGCTCTCATCGAGCAA
GATTTTTGAGACGAAATTTGAATCAGTTGTTGTTTTTTATATTCTAGGAC
CCACAAACCATAATCGAGGATGCCAAGAGAAGTCGTTACAAAGGGAACCA
ACAATCAAGGCAACCACTACGTCATATACGACGACGGTGCTTTTGCGTAC
AAAAATAGTAATGATGAAGGAAAGACAGATTCAACATATTTCAACAACGG
TCGTGGACACGCCTTCTACCAAAATGCAGCCCAAAATATCAAAGTTTATG
ACAATTTCAACCAAGGAACAAGAAAGGTCAGCCCAATCAAAGACAATAGT
CAATAAACTTGCAAACTAATTTTCTACCGCATATTTCAGAAATACTCAAA
TTGATAATCTGGCAATTGAAATCAACAACAAAATCAAAATCACAATTTCT
GACATACAGTGTTGCAATCACGGAAGAGAATAAATTGGAGAAGGGGAACG
TAAATTTTCTCAGCTAACACCCAATAACATCAAACCCTGGATACATAGAC
CCATGGACATGTTGACGAATTTCCCCTTGGATCTTATATCATTCTCCATG
CATTAGCAGGTGTTTCGTTCTAGAAGAGCCGACCAACTTTTCCTTAAAGG
CCGATCTCCACTTGGGCGCGCTGCGTTTGCACCTTTTGGCTTCAATCCTT
TTTGCTCGAAAAAAAGATTACGTCATAAAAACGTAGCGCGCGCTCAAAAG
TAAAGTTGAACACATTTCAACTTTTTCAACCGTTTTTTTTTTTTTTTTTT
TTTTTTTTTTTNN
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00003335-exon-sc0000026-1575043694:331287..331488 | TCONS_00003335-exon-sc0000026-1575043694:331287..331488 | Clytia hemisphaerica | exon |
| TCONS_00003335-exon-sc0000026-1575043694:330026..330741 | TCONS_00003335-exon-sc0000026-1575043694:330026..330741 | Clytia hemisphaerica | exon |
| TCONS_00003335-exon-sc0000026-1510915933:331287..331488 | TCONS_00003335-exon-sc0000026-1510915933:331287..331488 | Clytia hemisphaerica | exon |
| TCONS_00003335-exon-sc0000026-1510915933:330026..330741 | TCONS_00003335-exon-sc0000026-1510915933:330026..330741 | Clytia hemisphaerica | exon |
| TCONS_00003335-exon-sc0000026-1491911889:331287..331488 | TCONS_00003335-exon-sc0000026-1491911889:331287..331488 | Clytia hemisphaerica | exon |
| TCONS_00003335-exon-sc0000026-1491911889:330026..330741 | TCONS_00003335-exon-sc0000026-1491911889:330026..330741 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000026 | supercontig | sc0000026:330026..331488 - |
Blast
The following BLAST results are available for this feature:
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