TCONS_00003310 (transcript) - C. hemisphaerica

Overview
NameTCONS_00003310
Unique NameTCONS_00003310
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length656

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00003310 ID=TCONS_00003310|Name=TCONS_00003310|organism=Clytia hemisphaerica|type=transcript|length=656bp
gtttacaGGTGtagtaaaaataattaaaaaaacaacaacaaatgagGTGG
CAAAATAGTAAACGAAATATTTTATAATGATTATGAAAATGGGAGCGggT
GACGAAGATGACCAGTAAGTGACTTTATTTAACGTCCATATATGTGAAAG
TCCTACACAGGATTTCTTGTTCGgGAGCCGCCAAAGAAAATCTTGAAGTT
TCGAAATTATGCACCGAAAGATGAACAACTAAAAGAGAAGAAAGTTGAGA
AAGTTAAACCGATTGATgCTGCTGAAGGATTATCAGAACATTTGGAGAAA
GCCAAAGATGTCAAGGACATTGAAGAAGTTaatATTGCTACCTTGGCACC
GCGCAAACCAGACTGGGATTTGAAAAGAGATGTGGCGAAAAAGCTTGACA
AGTTGGAGAAAAGAACGCAAAAAGCTATCATCGAACTTATTCgcGATCGT
TTAAAAGGCGAAGAAAATTTAGCGGATGCAGTCAATACGGTGGGGGATAA
CTGAATTTCCATGACAACGGACAAATCGTggtgaaagttttttattattt
aaccCCTCATATTATACTTATTTTATAACCAATATGATGTAtttgaattt
tctatttctattcttAAGAACAAATATATCAATTTTTATCTGTCAAAATC
GAAATG
Run BLAST on NCBI

transcript from alignment at sc0000026:236942..249246-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00003310 ID=TCONS_00003310|Name=TCONS_00003310|organism=Clytia hemisphaerica|type=transcript|length=12305bp|location=Sequence derived from alignment at sc0000026:236942..249246- (Clytia hemisphaerica)
GTTTACAGGTGTAGTAAAAATAATTAAAAAAACAACAACAAATGAGGTGG
CAAAATAGTAAACGAAATATTTTATAATGATTATGAAAATGGGAGCGGTA
AGATTTTATTGTTTAATTTCCCCCAAATTTCCAATGGAATGGAATTTATT
TTCATTCACGACATTGATTGTTAAGAGATTTATATATGGTCCATACTTGG
AGTTCTGAAGCTTACCAAAAGACCAACCATTCAATATACTTCATCTAAGC
GAAATACAAAAGAGGCTTTTGATTGAAGATTGCTTTTCCCTTCTCCAAAG
TCAACAAAATTCTACAAAATTTGTTGTTTAACAGAAGAGATAAGATAAAA
AACTTTGCTTTGGCCAAAAAGACATGATTGTTTTTTTCTTTATTTTCAGG
GTGACGAAGATGACCAGTAAGTGACTTTATTTAACGTCCATATATGTGAA
AGTCCTACACAGGATTTCTTGTTCGGTGAATTCAAAAGTGAAAAGCTACA
ATCTATTGAAACATTTTGGCTTTTCACTTTTAAAAGATACAACAGAATAC
AACAAAAGGCTTTCAGTAAAGCAAAATCTTATGTTATAATCTTATGTTAT
AATTTGAAGCCATTTTTCAAAGTCTGGAATTTAAAAACAGTGAAGCAATA
TATTTCGGTGGTATTACCATTCTCAAGCTTATAAAAATACAAGTGTTCTG
TTTTTTTCTGTTTTTTTTTTAATTTTAAACTTTTTAATTTCAAATATTTA
AAAAAATGGCTTATATAAAACCCAAGTCATGATTCATATGTCTCTTTATT
GCACAATTGCATCTCCTAGTCCTACAGGAATCTAATTTTGGCTCTGCTAG
GCTTTCTAATGTTTTCTTTTCTTCTTTTTGAAGGGAGCCGCCAAAGAAAA
TCTTGAAGTTTCGAAATTATGCACCGAAAGATGAACAACTAAAAGAGAAG
AAAGTTGAGAAAGTTAAACCGATTGATGGTAAAAACTTTTTGTCAAAAAA
GGGTAACATGCTGCCTTAGTTAAAATACAGTGACAATTGGATTTACCGTT
CCAGTTGATTGTAATTTAGAAAAGGGGATGAGTAAAAAGTGCAGATGAAA
TTAGGATTCAAGAATAAAAAGTGTACATAAATTGTCGTTCACATGACTGA
AGGTTCAATCTCAAAATAAGTGTCTTAGAAGATTGAAAATCATGCACCTT
AATTCTGTTTGAGAGATTGGTCTTTTTTGAAAAGTCATAGTATAACTATT
GATTTTGTAGAACACTAATTCTTAGATTGAACTTTTAGCCATGAACAGTG
AAATAAAGTGTAGAGTTCTAGAAGTTGAAAAGGCTTGGATGCAATTTGGA
CACATTGNCTTTAAGCCATGAACGATGAAATAAAGTGTAGGGTTTTGTAG
GGTTTTGAAAAGGCTTGAATGCGCTTGGACACATTATTTGTATGTGAATT
TGTTCTTTGTTTCCCTTCGGAAGAATCTTAATTAAGTAGGATTTAAAGAA
TATTTCTGTTCTGTACAAAAAACGGTTTAGTTTAAACTACAAGGTTAAAG
TATCACATGTTCAAGGAATTAGGTGAAGGGGGTTGCTGAGTAGTGGGAAT
TTTTAATAAAATTCGGATGACAACCACCTGGTACTTTTTCGCAATTTTTG
AACTGAATGTGACCCTAAAAATATTTTACTTGCAACTTGCAAATTAAGTG
ACCTGCCTAAAAATCGCTTCGCAATTTTTATACATATACACTAGTCTTTT
TAGTAAATAGTAGGGATTGACTTGGTCCGGTGTAACTAATATTTTTGTAT
TAGACCCGCCCATTCGATTGTTCTTCTTTCATTCATTATAGCTGCTGAAG
GATTATCAGAACATTTGGAGAAAGCCAAAGATGTCAAGGACATTGAAGAA
GTTGTAAGTTATAATTGATTCCTCAGGGGGAGGGGGCTAGGGTTTGCAGA
ATGTCGGGTTCTCATGATATGCACCATTGCAATGTCTTCCACGGACCCAA
CAGCTGATTGGTTGGAAGTGATGTATTGACTGATTTTATGTCACTTACAA
CCAATCAGTTATTGGGTCCGTGATGTAATGCCAGAAGACATTGCAATGGT
ACATATCATGAATCTGAGGACCAAACCTCCACAGTTTTTCCTTGCAGAGA
CTAAATTTTTGCAAAAAGAGACCCTGAGAAAGATCACTTTCGAAAAAAAA
ATTCAAACCTTTTTTAAGAGATTATTGACTTTTCATGGTCTTTATACCCT
TAAAACGATTCACAAAGGGGAAAGTCTGGACTGTTGAGAGACAACTTCGA
CTCTCTGTTGTTGTTACCACCCGCACATACCCGTCCGCACATACCCGACC
TCTTTTTTTGGCTTAGTAATCCCCCTGATTGATACTCTTCTTTCTTCCTT
GTGTTAACCATCGAATTTTGAATTGTTGTTTTTCTTTTCTTAATAGTCAG
TGTGTCAGTCTCTGAGGATGTTTCTTTGTTTTCATATGTTTTCATATTAG
TATTTTCGATCGAACAAATTTCATTCTAATCGATTGTACATTCGATATTA
TATGAAGGAATGAAGAGAAGGGTATGAATTATGTTGCCTCTTGTCTATGC
TATGCCCTCTTTCACTTTTTATTCGGAATCGTCAGTCTGGTGTTCTTCGA
ACGCGAGGTTCAAGTTTGGAAGTTCATTTACTGTATAGTATTATTTTTCT
TTAGAATATTGCTACCTTGGCACCGCGCAAACCAGACTGGTAAGAAATGT
ATTTAGAGTGGAATACACGTTTTCTGTTAGAACGTCAATAAATTGTGAAT
CAATCGGACGCTCTTAAATTTGTGGGATTGAAGCCTTAAAAATGTTCTTA
AAGTGTTCTTATTTAATAAGAAATTGCACGTTTAAGGGTCTGCAGACGTT
ACTAGAAATTTTCTGCTATAAAGCCTTATGTTCTTATAAACTTGGGACGA
GATGGAGTTTTTACAAGCTCTCATTTGATTTGGTTGGTCGTTAACCAGTA
ATAAAACAATTTTGTTACTTTTTCTAAAGAACGCGTCATTTTTATTACTT
CAAATGACCAATCTTATAAAAACTCCACCACGTCTGATAAACTTTGTTCT
TATATTAAAAAAATTGCAATGTCAATTTTTAACTGCCTTATGATAGAGTT
GGCAGGTTTCTAGACTAGCCAAATGACATGTTGGTAACATCGTCTTTGCT
AATTACGATTTAATTGGGCTATTATATCTTCGGTTATTTGATTGTGCGTC
AAGCGGCTCCCCATAAATTGATAAAAATCTCTGACGATGAAAAAACGGCG
GTAACATCATTCGTAGCTGGTTTGGCTATCTAATGACTTTAAGACCCACA
AGAGAGTAGACCGAAAAGCTCAAAATAATACACGTTTCTTTTATAAGAAC
GTCCAAAATATTTGAAGACCACCAGTATTCTTAACAAGCCTTAAAATGTT
CTTAAAATATACATGTCTTATTTTCACCATTTCATGAGTATTTTGTTTTT
CGTGCAATTTCCCAAAACATTGGATGTTTAGAGTCTGCAAGCCTCTTTAA
TGTTATTTTAACTTGTTCTTAATTTTTTTTGCCATTGAATCCTTATGTTC
TTATATAGTTTGTTCAAAAAATGTATGCTAAAAATAACATGTTCTTTATT
TGTTCTCACGCTTCTGATTCTTAAGTAGGTCTTGTTTTTTCGCTTTTTGG
TACTGATTCTCTTGAGCTCATCTGATTCAGAACGATAAACTAGGTATAGA
ACTAGGNTGTTTTTTCGCTTTTTGGTACTGATTCTCTTGAGCTCTTATTC
AGAACGATAAACTCGGTATAGATACACTGATTCTTGTCTTTGCAAAACAT
TTTTGAATATGTTTTCCAGCTTTTGAAGGAATGAAAAATTCCGAGCACTT
TTGTGAATTTTGGATTGGGCAAAAAATGCTAAAAATGACTGTTTTTACAA
TTTTGAAGAGGATTATTTTCCACTTTCTTTTTCCCTATTTGTCAATCATA
CAAAAACATTTCAAAATCAAGATTTGGCGCAAGTTTTCACTTTATCCATA
CAGGGGGTGGACGAACATTTCCAGAGGGTAATCCTAGGCGGTATTTTTCC
ATTCTTCCAAGGAAGTAAAAAAGTTATTCTAGAATTTTTAGGGGGTATCC
ATACATTATCAATAATTTTTTTGACTTGATTAGGTTCGTCTACCCCCCTT
GTATTGTTTTCTTAATGGAACAGCCCATTAGGAGGAGTTTCCTTGTTTGG
TTTTGCTGACTTATCTACTTATATTTGAAAAGCAAGATTATACAAACTTG
AATTTACTCTGCAGAATTTGAACGCAGAGAATCCGAGTAAACTCAAACAT
GCAGCTTACAGCGATACACAAGTTGCAAAATTAAAATCTGAAGACAAATC
ACGCTTTTACTCGAAATTTTTAATTGCTTCTTATTTCTGATTGGTTCGAA
TTTATTGACACTAATTAAGTTATCATATCAGCTGTAAGTTGTAAAAGACA
TGGGAATAAAATCACGTGAACTTTTTCGAGTAATCACATGTTTTGACTGC
CTGATATAAATTTGCAGCCCATGTATTAACGAACCATTAACAAAGCATTA
ACAAGATCCGTTTTACTGGTCATTCCAAATTCGATATTTGTAATTGATTG
GCGTTCTATGATCTATTGACGTGAGAACTTAATTAAAAAAGATTTTACAA
ATTGTCTAATCACGTTCGTTTAATGACATTGATTGATTTCATTATGAATT
AGTATGTATGCGATAAGGACTTCTTTAAAACCTGACCCTCCATAAGGGAG
TGGTCAGAAAGTATCCACCAAGGGGGGATGGAGGATTCTAGGGGGGGGGG
TGCCAACAATTTTTCCTAAGGGAGGTCTCAAAAAATTTCATGTCTTTAGG
GGAGGTACTACAGGAGGGGTGCCAAAATACATTGACTGGTTATGATATGA
AATCTTTTCCCTTAGTGTGAAATGCACGATGTTTAAGAACTTCCCATATT
AGACTTACACCAGCTCTCTCCTTCAAAATATTGATCAATAGTTATTTCAT
TATCTAAAATTGATTTATGGCAAAGCGAATTAAATTTGACTATTTGGTAT
AATTCACGGTGCAAAATTTTCACCTATTTTACAAATTATCATTCCCACTG
GAGAAATAGTTTCACCGCCGGGGCACTGAGACATAAAAAAGATTCACTGT
GAACCCGAGGAAATGATCCGCTTATTGAACAAATGTAGCTTTTCAACATC
GTAAATTCACTCGAAAAACACGGTCATTATTTTTGGATCTTTTGCGACAA
CTCTCACAGCTTTCACTACCTTGAAAATTTATCCTAAAATTAGGAAAGAA
GTCATTGTAAGTGCGTGATATTGATATTGCGCTGTGAGGGACCGATTGAA
AAGTGTCAAAGCAGAATTGTTATTTTATGATGTTTGACATCTTAATATTT
TCTCGATTCTTCTCTTTCAAGGGATTTGAAAAGAGATGTGGCGAAAAAGC
TTGACAAGTTGGAGAAAAGAACGCAAAAAGCTATCATCGAACTTATTCGT
AAGTGATTTATCTCTTCTTGGCATAATCTAACCCCTTCAAACTTTGAAAT
TTTCACTTCACGTTAAGAATCGGTTGGCGTTTTTACTTCAGAGGTGATGT
CTGTGCAAACTGTGCGGTTATTTAAAAGAGTTTCCAAAAATTTTGAAACC
TTCTGATGTTCTTAACATGTTGTTATTTTCACCACTTTCTGAGTATTTTT
GTCCATTCTCCTAAGAAATTGGATGTTTTAGAGTCTGCAAAACCTCAAAA
TATTTTTAACTTTTAATAATTGGCCATCGAAGCCTCCCTTTTTGGCTCAA
TAAAAAGTACCGGGACAAGACAAATTTTTCTGAAAATCAGGGTACATACT
GCAATGATCCTCAATCTCAGGGCTGCATTTTATGCCTTTTTCTAACATTT
TGATAACGTAAGGTTTGCATCTCACCAGTTTCATCGATTGATAATATTTT
GTTCTTTTCCAAGAACGGATCTATTTCAGTGAAATTGACAGTAACAAACA
TCAGTTTATTTTCAAGTGAGCTTTGTAGGGAAATGAACCCTCAGCCTTCC
CTTTTCGTAAGAAATCACTTATGGAAAGCATGACGTCAATCGATGGTTAA
AACTTTGACACGTAAACACCAGACTGTGTTTATATTTTGTCGTGTTTTCA
TATATACTACACAACTTCATATATAAGAACTTTGATCAGTATCAACATCT
TTTTATGATGTAAACTCAGCTGTCAGTAGATTTAAAATATTGTATCTCAT
TAAAGCTAGTAATCACCGACGTCAGTCAAAGGTCATTAGTGGTACTCTAG
AAAGAAAAAGTGTCCATTAAATTCTCTCTCCTCAATTGTGGTACAATTCT
GACTTAGTTGTCTTTCCTTAGCTGTAATTTGATTGTAATTGATTTTTTAA
GACCATTGAGACCCACATTTTGGTGACAGCTAAGTCTCTTATCCATTTTT
AGTTGTTGTGTATTAACTGATATTTGTTGTGTATTAACTGATATTTGTTG
TGTATTAACTGATATTTGTTGTGTATTAACTGATATTTGTTGTGTATTAA
CTGATATTTGTTGTGTATTAACTGATATTTGTTGTGTATTAACTGATATT
TGTTGTGTATTAACTGATATTTGTTGTGTATTAACTGATATTTGTTGTGT
ATTAACTGATATTTGTTGTGTATTAACTGATATTTGTTGTGTATTAACTG
ATATTTGTTGTGTATTAACTGATATTTGTTGTGTATTAACTGATATTTGT
TGTGTATTAACTGATATTTGTTGTGTATTAACTGATATTTGTTGTGTATT
AACTGATATTTGTTGTGTATTAACTGATATTTGTTGTGTATTAACTGATA
TTTGTTGTGTATTAACTGATATTTGTTGTGTATTAACTGATATTTGTTGT
GTATTAACTGATATTTGTTGTGTATTAACTGATATTTGGGGCAGTTTTCA
ATTTCACACCCATTAAAGTTCACGAATCAGCTTCTTTTTCAACAAGTTCC
CTTCATTTTTTCTCAGAGTTTTGGCCAGAATTCGGATTTCCCGCGATAAT
TTAAAATCTCGAAAAATAATTCAGCAACTTTCAGGTTTTTAAAAATGGCT
TGAGCCCTGCCACCCCCAAGAACCCCCCCTCAATGAGAAGTGCTATCCAT
CGACTCTTATAGATTCTGCTGTTTGTTGTTGTTTTGGCGAGTACTATCTT
GTCTGAATGAGATGTTGACGCACTTTTCTACAAATTGTTTTGTAACATGA
TAAGAAATTCGTGGCGAGAGCTTGTTTCCTATGTTTTTTATTCGATTTTA
CTGTGGTGGTACCACTTTACATAAACCCTATTTTTTAAGAACTTGATACT
TTCAATGATTTCATAGCCATTAAAATCATAACTTTAGTTTCTCATCTTTT
AAAAAAAATAAAAAATAAATCTCTCCAAAATGGAGAAGGGTAACTTTCAG
AATTTAAATTTCTTACTCTTTGTATTACACTCTTTTTTATAAGAACAATG
AGGCTCGATAAGCCAAGAAATGAGAATATGATAAGAACAGGATAAGAACA
ATTTTACGCTTAAAACGCAAACTAATAAGAACAGAAATTTACTTTAAAAA
ATGTAGTGTAATTTTCAAATTTCTCCTACAGTTCAGGCCTTTCTACATAG
TTCTACAGTATGTTTAAAGACATTTTTCAGGAACAAAGATCCAAGGCTAA
ACCTGGCAATGCGTATCTGCGCAATTTTTTCATCGTCATTGATAAACAAA
TATTTAGCATTTTGGTATCGACTAGTAACAGCAATCAGAACAAAAAAGAC
CTTTTTATTTATTTGATCAGTGGTAATTAAACAACACGAAACTAATTAGA
GATGATTAAAAATACCGATTAACTTGTCGCTTGCATGTACACTACACATT
AGTTTTCAAGAACTTTTGAATTTTGTTTGAGGCTCGGCTGTTCTTGTTAT
TTTGCATTTTAGCCTCCGTATAAATCCTCTCTGATCATGCTCTTTTTGTT
ACTTTGAAAAGTATTTAATTTTGGGATTCTTTTTTTCTTCTACTTGAAGT
TTAATTTTTTTTTGGTATTTTTTCAGAGCCATTTTTCTAATAAAAAACAT
TTGCCTTGTTTTTCTTCTAATTCCCAAGGGTTTGGTCGAGGAGCTTTTTG
TTTTGATTTTTCAAAGAATCTCTGTGAGGAATCAAATGCACTTGATATAA
ACAAAATTATTATCTTATGAATGAATTCAATTGAAATATTCTCGTAGAAA
AGGGGTGTGTTCGAAACATGTCGAAACACAGAGTTTTTAGCTTCTTTTGA
TTTTTTTATTCGAAAAAGTCAATCGAACTAGTCTACAATTTTTTGGGTTT
AGCAAAAGATACCTGCTTCAAATATTCGTCATTTAAAAAGTAGAACGAGT
TTTTGTTTTTTAAGTAAACGACAGACAGAATCAGCGAAAAATTGATTGAT
TTATTTTTATCACTTTTTATTTTCATAACTTTTTTTCACAAGATATTTTC
TAGTTAGAGAAAATAATAAAAATGTTTTTCCTGCTACAAGACGTATATAT
TATATGAAAAAACAATTTCAAAAAAAAACATAACCGTTACAAAAATACGT
TAGTGCAAGGAAAAAAGTGCAATGTCAGCACAAAAATTGCTTTCTACAAG
AACATAAAGATTCATAAAGCACAAAACCATCAAGACTGTACGATTTTTCA
TTTTAAATGTTTTGTTTTCATTTCATTTGTTTTTTTTGTTTTTGTATCCT
TCTCGTCTTTAAAACACCTCATCATGCATGTCAATCCAAGAAGTTTTTTT
GATATGGTTAATTTTTAACTACCCGTTAATATAACTGTGCCGTCATTCTG
GTTAAGATCGTTTCGTTTTGTCGTATTCTTTGTCGGACAGGAGGGTCGGT
CGGTCAGGGGTGGAGATCCATCAACGCGTAACATCAAGCCTTCATTTTTG
GTTGTTTTTCTCTGCGTTTTGAAGTTTAGTGGCAACTTTACGTTCGTGGC
CAGCTGGGCTCGCTCTGTTGGTGTTCTTTGCTGATTCCTTCTTCGAGCGA
CCTTTACGTGTTGACGGTTCGACGTATTTACGGTCGAAATTGTAATGCTC
ATATTCGTCGAAGTAGAGTTCCGTGGCAGCGTTTGCTGTGAATAAACTTT
GCTTCACTTTCATCTTGAGTTTGTCTTCTGCAAAAAAATTATGTGTGTTA
CTTCTCTCTCTTTGATTCCAAATGTTATCTGCGAAAAAAAGCTACACCAG
CCTCCTATATATCATCAGGTTTGTTTACAATTTTTTCACGCATAAATTAT
CTTGTTCCTTTTGTTACTCTCTTGCATAAATTATAATTTCCTTTGATGGA
ATGCCGCATAAATTATAACGTATTGTTGTTTAATCAAATCAATTGTCTTC
GATTTGGTTAATCTGATTGGTTGGTTCTTACGTAATCAAATTTTGATTGG
TTGTTTAAAAATAGAATTATGAATAATTAACAAACGCTACCAGCGTCATT
TACAAATAAGTTGAAGCAGCTGATCTCAACATCTCATATATTCATACTAC
AAAAAATATGGTACAAAAATCTCTTGTTATATCAACTCAGCAAAAAAATC
TCGCTTCTTTCTAGAAAAAGCTTTTTTCGAATCAAAACATCAAATATTTA
CTCGTATTTACTGCATATGTGTTAAAAAATAATTTTTTGTCTGATTGCCT
TTTCTACAATATGCAGACTGCGCAGATTTTTCAATTTTTATATATCTATC
TAATACAAAAGGCCAAAAAACGATCAAAGTTTATTTTAAGGCTTTGCGGA
CTCTTAAAAATGCAATATCTTAGAAAATTACAGCAAAATACTAAAAAATA
AGAATATTTTAAGAACATTTTCAGACTTCAAATCCAAGAAGTTAAGAACA
CTTAAAGGCTCAACAACTTTAGACGTTCTTACAAAAAAACTAATCTTTTG
ATTACATTGTCACTGGAGTTTGAAAATTCCCTGTTCTCCATTCATGCTGT
TAGATCAAATGGATAGAAACCACAGGAGGACTAGAATTCCCTCTCGCTCC
AATTGCAAAACAGAAATTCCATCTCTAATTCCAATTATTGTAAAACTCGT
GATGAAAAATACTAGTACATATGTTTCCTTCTCATGAACTTGTATCCATC
TCAAATGCACGTTTTTCATAAGAACAAACTATATAAGAACAAAATAAACT
ATATAGTCAAAATATTACGAACAAGTTAAGAACATTTTAAGGGTCTGAGG
AATCTAAAACACTCAACTTCTTAAGAAATTGCACAAAATTCTCCGAAAAT
TATGAACGTAAGAACATGTTAAGAACATTTCTAGGCTTAACACTCAAAAG
GTTAAGAATATCTTCGAAAATTTTGGATTTTTTTATGAAAAAACGAGATC
GCCATGTAAAAGTGATCGACCAGGTGTCAAGCAAAATAACATTACTTAAC
CCTTTAAGTGCCACGGTCATTTTTTTCTAAGTTTTTTAAAGAAAATCGCT
ACCTTATTGGAACTAAATTTGGCCAAATTTGAAGGTTCTTGGATCACTCG
TTGACCAAAAATGGTCAAAAAACGGTCAAAATCTTAAAAAAGTGGATTTT
TGTCAAATTTTTGCTTTTTTTTTGACTTTTTAGCTTAAAATCTCGCTGAA
AAGACTCACTTTTGATTTTTTTTTGCTTGAACATGAAGCCCAATCCAATT
CCTACGAGTTAGACCAAAAATGACGATTTATAACTCAAACTGGGCGCCCT
CCTACATAGCCCATGTCTGATATATACGACATTGGCACTTAAAGGGTTAA
CATTAACTTTTAAGGATTTAGATGGGCTAAACATCCTACAGTCAACTCTC
TCTAATTCGAACCTTCATAATTCAAATCTATCTGTAATTCGAACTAAAAT
CTTAGTCCCCTCAACTGCAAAGTGGTATACAATAATCTCTGTAATTTGAA
TCTTTCTCTAGTCTTTAATTCGAAGGGAAATCGAATTAAAAAGATTATAT
GTTTGTAACTCTTTATTTATAAAAGTTTTGGTTGAATTTTTTATCTTTTT
ATCTTCTAATAAAGATGACTTCACCAGGAAAATGTGGTATTTCGGGCATT
TTTGAACCATTCTTAGTTTTAAATTGACGAAATTTTTAAATCGACTCGAT
TTCCAGATGAAACAGATGAAAAAAAAATTTTAAAAATTTTGTCTGCATGG
CTTTAAGGCACCTGTGTGCCAAATTTTCGCCACCTTTCATTTATTCATGT
ATATCATGTATATCTGAGGCGCAGTACATAAGTGTAGTGGTTATCAGTCT
TGACTTCCGTGCAGGAGGTCGGGGTTCGATTCCCACTCGGTGCTATGATT
CACTTGGTAAATGAATGTATCTTCGCCCGGGCTAACCCATGCCATGTGAG
GGGAAATGAGTACCATGCTCTAATAAAAGAGTGTGGGGAGATATACCTGA
CTCTTTGGTGTGGTTGCTATACTTGTCAGGTTCGATCATACGGGAGGATG
CACTGTCCTCCCGAGTCGTTCAAGTATAATAACTATACACCATCAGCTCT
GTATGTCGAACACGAGTTGGCAGAGTCAGGTAAACGCAGTGATTTTCCTA
TCCTAGGATAGTGAATGTTGTCCTGGATAGAGCCTGTTACGTTCATCGGA
AGGTTCGTCTCTCATTCTCTCATCATGCATATCAGGAAAACTTTTTATCT
ACAACTGAATCACTTGTTCCAGTCCCGTCGGCATTTCCCGTTTCTTTTTA
TATTTATGGCAGTTAAACGTTTTGGGTAAAAACAATTTTAAAGTCTGTCT
CAAAATTATCTGTCATGGAGAAAAGAAGGCTATAATTTCTGTTTCAAATA
GAATCAATTATCGGTTTTGCCCTTGTTGAAAAGATATCCAAGAGTGAAAC
ATTAAACGGAAAGAAATCAAAAATATTTGGGAAATGAAGAAGAAAAAGTT
CTTCTAATCAAATTCCAATTACCAGTCTCTTCTCCAAGGTACTTTAGTCT
AACCTAGACCCAAATGTTAGCATTTAACTTTAATTTTTCAGGCGATCGTT
TAAAAGGCGAAGAAAATTTAGCGGATGCAGTCAATACGGTGGGGGATAAC
TGAATTTCCATGACAACGGACAAATCGTGGTGAAAGTTTTTTATTATTTA
ACCCCTCATATTATACTTATTTTATAACCAATATGATGTATTTGAATTTT
CTATTTCTATTCTTAAGAACAAATATATCAATTTTTATCTGTCAAAATCG
AAATG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_001840XLOC_001840Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00003310-exon-sc0000026-1575043694:249150..249246TCONS_00003310-exon-sc0000026-1575043694:249150..249246Clytia hemisphaericaexon
TCONS_00003310-exon-sc0000026-1575043694:248772..248847TCONS_00003310-exon-sc0000026-1575043694:248772..248847Clytia hemisphaericaexon
TCONS_00003310-exon-sc0000026-1575043694:248269..248363TCONS_00003310-exon-sc0000026-1575043694:248269..248363Clytia hemisphaericaexon
TCONS_00003310-exon-sc0000026-1575043694:247344..247405TCONS_00003310-exon-sc0000026-1575043694:247344..247405Clytia hemisphaericaexon
TCONS_00003310-exon-sc0000026-1575043694:246508..246542TCONS_00003310-exon-sc0000026-1575043694:246508..246542Clytia hemisphaericaexon
TCONS_00003310-exon-sc0000026-1575043694:243699..243775TCONS_00003310-exon-sc0000026-1575043694:243699..243775Clytia hemisphaericaexon
TCONS_00003310-exon-sc0000026-1575043694:236942..237155TCONS_00003310-exon-sc0000026-1575043694:236942..237155Clytia hemisphaericaexon
TCONS_00003310-exon-sc0000026-1510915933:249150..249246TCONS_00003310-exon-sc0000026-1510915933:249150..249246Clytia hemisphaericaexon
TCONS_00003310-exon-sc0000026-1510915933:248772..248847TCONS_00003310-exon-sc0000026-1510915933:248772..248847Clytia hemisphaericaexon
TCONS_00003310-exon-sc0000026-1510915933:248269..248363TCONS_00003310-exon-sc0000026-1510915933:248269..248363Clytia hemisphaericaexon
TCONS_00003310-exon-sc0000026-1510915933:247344..247405TCONS_00003310-exon-sc0000026-1510915933:247344..247405Clytia hemisphaericaexon
TCONS_00003310-exon-sc0000026-1510915933:246508..246542TCONS_00003310-exon-sc0000026-1510915933:246508..246542Clytia hemisphaericaexon
TCONS_00003310-exon-sc0000026-1510915933:243699..243775TCONS_00003310-exon-sc0000026-1510915933:243699..243775Clytia hemisphaericaexon
TCONS_00003310-exon-sc0000026-1510915933:236942..237155TCONS_00003310-exon-sc0000026-1510915933:236942..237155Clytia hemisphaericaexon
TCONS_00003310-exon-sc0000026-1491911889:249150..249246TCONS_00003310-exon-sc0000026-1491911889:249150..249246Clytia hemisphaericaexon
TCONS_00003310-exon-sc0000026-1491911889:248772..248847TCONS_00003310-exon-sc0000026-1491911889:248772..248847Clytia hemisphaericaexon
TCONS_00003310-exon-sc0000026-1491911889:248269..248363TCONS_00003310-exon-sc0000026-1491911889:248269..248363Clytia hemisphaericaexon
TCONS_00003310-exon-sc0000026-1491911889:247344..247405TCONS_00003310-exon-sc0000026-1491911889:247344..247405Clytia hemisphaericaexon
TCONS_00003310-exon-sc0000026-1491911889:246508..246542TCONS_00003310-exon-sc0000026-1491911889:246508..246542Clytia hemisphaericaexon
TCONS_00003310-exon-sc0000026-1491911889:243699..243775TCONS_00003310-exon-sc0000026-1491911889:243699..243775Clytia hemisphaericaexon
TCONS_00003310-exon-sc0000026-1491911889:236942..237155TCONS_00003310-exon-sc0000026-1491911889:236942..237155Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000026supercontigsc0000026:236942..249246 -
Expression

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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
247.868	220.039	240.03	271.318	172.216	132.704	191.224	199.656	286.39	211.254	280.232	372.497	210.192	244.983	204.609	203.181	195.607	196.521	132.462	107.711	145.035	137.556	187.374	172.749	248.826	247.929	215.375	206.508	134.165	129.962
Blast
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BLAST of TCONS_00003310 vs. Swiss-Prot (Human)
Match: CCD12 (Coiled-coil domain-containing protein 12 OS=Homo sapiens GN=CCDC12 PE=1 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 8.505e-29
Identity = 62/104 (59.62%), Postives = 80/104 (76.92%), Query Frame = 1 
Query:  193 LKFRNYAPKDEQLXXXXXXXXXPIDAAEGLSEHLEKAKDVKDIEEVNIATLAPRKPDWDLKRDVAKKLDKLEKRTQKAIIELIRDRLKGEE-NLADAVNTVGDN 501
            L+ RNY P+DE LK+++V + KP+   E + E LE AK    IEEV++A LAPRKPDWDLKRDVAKKL+KL+KRTQ+AI ELIR+RLKG+E +LA AV+   + 
Sbjct:   57 LRLRNYVPEDEDLKKRRVPQAKPVAVEEKVKEQLEAAKPEPVIEEVDLANLAPRKPDWDLKRDVAKKLEKLKKRTQRAIAELIRERLKGQEDSLASAVDAATEQ 160
The following BLAST results are available for this feature:
BLAST of TCONS_00003310 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
CCD128.505e-2959.62Coiled-coil domain-containing protein 12 OS=Homo s... [more]
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