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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00003305 ID=TCONS_00003305|Name=TCONS_00003305|organism=Clytia hemisphaerica|type=transcript|length=2819bp
tacTTGTTATGATATGGggttaaaatgtaaaaaacaatCTGCAAAGTGCG
TCCGGAAAGAAGCTTAAGGACACTTTTTTGTATCTATTGATTAATCAGTA
AGTTAATGgattctttttaaaataaagattttgttcagctttttttcgga
cacacAGAGTAACATAGAATAAATACGCTTGGTACACACAAAATAATTAA
AGTGCAATCGACTCTTTCAGTGTCCTGGGGTAGCAAGTACAACATTTAAG
GAGCATCACTTGAAAGGTTGGAATTAGGTTGTTTTGCTTGGAACGATCGA
CCTGTCCTGTTTTTTATGCGGTATTAACGCCGTCCTTTGAAGATGATGAC
TGTTGGAATAGCGATTGCCGTTAGAGTGATTCACACTGATTGACTTTTGA
AGTAACTTTTAGGGTTGATACCTTTTCGGGAGAAGAAATTTGGGCAATAA
TTTcacgaaaaatgttttcttaattttcatttgctttaaCGAAAAGTTTG
TTTCAGACTTTTCAGACAAAGCTGAATCTACAAAATTTAATTCCAGCGAT
AATATAtggaaaaaattctcttttcacAAATTTGCCGATTCACGAAAGTT
TCTTCTCGCGATAGTTTTCCCCTACAGTATTAAAAACCTTGGCACGGAGT
GtccaaagaaatatttcaatcGCAGGAAAAAAACGACTATAAAATATCAC
TGTCAAAATAATTAGCTTTGTTATCAATACCAGGGGAGTCACGGTCTTCG
ACTGCTTTAATTGTGTTCACAATGTCCCCGTTTGGTTCAATATGGTTCTC
CTCGTCACCATCGTCTTCATCGTCAATTTCATTCTTAACATCTTCAAGTG
TTGGAAATGGTGCTTCTTCTTTGGTTGAGGCTGTCGTTGTTGAATTATCA
CTGAAAGTGACAAATTGCGCTTGAATGTGAAAAATATCGGTATTGGATCT
CTTTCGGAGACTTGAGGTGCTCGTTTTTCTGCTGCTATGGTTACCAAGTT
CCGGAGGAACGTTATCGATCAACGTACGAATTTCCTGGATTTCGTCTCGA
AACTCGTGCAAACTTTCTTGGATGTGTTTCAAATAAGATAAAGTCTCCGT
ATGGCAAAGCGCATTCTTCTCCATGATGTCTTGAACGTTGACAAATGGGT
ATCGAACGTTTTTGAAATGCTTAATGTAGTTGAACAGCttgactttcaaa
acaaaacgtATGGCTTCTTTATATTGATTATTGATGAGATTGCAAAGAGG
AATGTCATCACCTGGCTGATAATTACTTTTCTTTCGACTATTTCGTACGC
TCCTACGAAGTTTTTGAAACCGTTGTCCACGGCGACTTACATCACGATCT
CCTTTTTTCTGAACATTTCCATCAGGTCTGGGaacattcaaattttgttt
gaatttcccCATATTGAAGACTCcacctttcttctcttttcctTTGTTAG
GGCTATTTGTTTTCGAATCGAGGTTAGATTTGGTCGATCGTGGCGCATAT
TTCCCGTCTAAAACATCCTGCATGCCAGGTAAAAGCTTGAAATAAGTCAA
ATTAGCCTCCTCGTCCTTAGGAACTCTCGGGAAGAAGAAAAACCAAGTAC
CTTCTAGATGTTCTTGTTTAGATTTGACGGAATAATATCTCCAACATGTT
TGAATAACCACAGCAGCCGGGTTACGAACTTTAATGAATCGTAATTGCTT
CTTTTGTTTAGCGACTTGTAGAGCAAAGCCAGAGCCAAGAATACCGGCCG
GTAAAGCGAAGAAAGCGCACCCTACCAACGCAAAAACGCCAGTCATTAGC
TTTCCAGCCCACGTTTCCGGGCTAATATCGCCGTAGCCTACAGACGTAAC
AGTTATCATAGCCCAATATAATCCATTAGCCATATTGTCGATCGTACTGG
TCTCTGCGCCCACTTTCTCGATGATATAGATCAAGTAGGTCCCACCAAAC
AAGATGATAAAGCCAACAAAATAACACGTGACTAGTTCCTTGCCGTGTTT
GTAAACTACACGGCCCATAGTGCGTAGATCACCTCTTTGCCGATCCAAAC
GTAAAATACGAAAAATCTGTAGAAACCTCGTAATACGCAGTATGGTGAAG
TATGCAGTCTGAACANTTGCCGTGTTTGTAAACTACACGGCCCATAGTGC
GTAGATCACCTCTTTGCCGATCCAAACGTAAAATACGAAAAATCTGTAAG
AACCTCGTAATACGCAGTATGGTGAAATATGCAGTCTGAACGCTAAGAAT
AGCAGTAACAAGTGTTGATATGATAACAAACAAATCAATAGCCATGTAAA
GAGTTTTCATGAAGCGAATTCTACCACATAAACCTTTGTATTTGCCAAGG
TAGCTGCAAGACCAGAGACGTGCGATATATTCTACAGAGAACCATGATAA
TAGGGCTAGTTCGTAATATAAGATCAAGTTTTTCAGTGTAGTACTATCTT
CGTACGTGTCAATAGTGGACAATATGCTGGTAACAATACTTCCCAAAATG
AGAACTAGATTCATAAGATGGTACGATATTGCTATATTANGTCACAATAC
TTCCCAAAATGAGAACTAGATTCATGAGATGGTACGATATTGCTATATTG
GAGTTCGGACGCTCCAGAAAGACGTAGACTTTACGGCGTACGTGTAAATA
ACGTCCTTTACACGAATTGTCGACGGGTTCAGCGTCCATTAACGCCCGTT
GTTGTTCAGCAAATAAGTTGGTTTTCAGTTTTGGGACAGCAGAGATATCC
ATTGACGCTCCAAACATCTtggctttgaaattttgaagtcttCTTGTAAT
CTGTTTAAACGAGAAAAAT Run BLAST on NCBI transcript from alignment at sc0000026:189973..198848- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00003305 ID=TCONS_00003305|Name=TCONS_00003305|organism=Clytia hemisphaerica|type=transcript|length=8876bp|location=Sequence derived from alignment at sc0000026:189973..198848- (Clytia hemisphaerica)
TACTTGTTATGATATGGGGTTAAAATGTAAAAAACAATCTGCAAAGTGCG
TCCGGAAAGAAGCTTAAGGACACTTTTTTGTATCTATTGATTAATCAGTA
AGTTAATGGATTCTTTTTAAAATAAAGATTTTGTTCAGCTTTTTTTCGGA
CACACAGAGTAACATAGAATAAATACGCTTGGTACACACAAAATAATTAA
AGTGCAATCGACTCTTTCAGTGTCCTGGGGTAGCAAGTACAACATTTAAG
GAGCATCACTTGAAAGGTTGGAATTAGGTTGTTTTGCTTGGAACGATCGA
CCTGTCCTGTTTTTTATGCGGTATTAACGCCGTCCTTTGAAGATGATGAC
TGTTGGAATAGCGATTGCCGTTAGAGTGATTCACACTGATTGACTTTTGA
AGTAACTTTTAGGGTTGATACCTTTTCGGGAGAAGAAATTTGGGCAATAA
TTTCACGAAAAATGTTTTCTTAATTTTCATTTGCTTTAACGAAAAGTTTG
TTTCAGACTTTTCAGACAAAGCTGAATCTACAAAATTTAATTCCAGCGAT
AATATATGGAAAAAATTCTCTTTTCACAAATTTGCCGATTCACGAAAGTT
TCTTCTCGCGATAGTTTTCCCCTACAGTATTAAAAACCTTGGCACGGAGT
GTCCAAAGAAATATTTCAATCGCAGGAAAAAAACGACTATAAAATATCAC
TGTCAAAATAATTAGCTTTGTTATCAATACCAGGGGAGTCACGGTCTTCG
ACTGCTTTAATTGTGTTCACAATGTCCCCGTTTGGTTCAATATGGTTCTC
CTCGTCACCATCGTCTTCATCGTCAATTTCATTCTTAACATCTTCAAGTG
TTGGAAATGGTGCTTCTTCTTTGGTTGAGGCTGTCGTTGTTGAATTATCA
CTGAAAGTGACAAATTGCGCTTGAATGTGAAAAATATCGGTATTGGATCT
CTTTCGGAGACTTGAGGTGCTCGTTTTTCTGCTGCTATGGTTACCAAGTT
CCGGAGGAACGTTATCGATCAACGTACGAATTTCCTGGATTTCGTCTCGA
AACTCGTGCAAACTTTCTTGGATGTGTTTCAAATAAGATAAAGTCTCCGT
ATGGCAAAGCGCATTCTTCTCCATGATGTCTTGAACATTGACGAACGGAT
ATCGAACATTTTTGAAGATTTTAATGGATTGGAATAATTTCACTTTGACC
ACAAAACGAATGGCTTCTTTATATTGCTTATTAAGCAAGCTAGACATCGG
CATAACGTTAGAGCTCTTCTTACGTTTCTCCGCTTTGCTACTCGTACGTA
ATTTCAATCGATGTAAACGTCGGTCTTCTTCTCGCTCTTCTTGACTCGTT
GTCCCATTACTGAAAGGTTTGGTCATGCTTCTCTTCATCTTCTTGAAAGA
GAATCCTTTCTTTTTACCCTCCTCATCAGTTTCAACCACCATCCTGTTCG
GGTAAACACTCGACTTCATGATCTCTTGAACACCGGGTAAGATCTTGTAA
TACTCAGGGGTGTTATTTTTCCCCAAGATTTGCGGGAAGAAGAAAAACCA
AGTGCCTTGTAGTTGATAGTTACGTGGACGTACGGCGTAGTTTCGCCAAA
AAGTTTGTAGAACAACGGCAGCCGGGTTACGTACTTTGAGGAAGCGACGT
TGTTTCTTTTGTTTAGCGACTTGTAGAGCGAAACCTGAGCCAAGAATACC
GGCCGGTAAAGCGAAGAAAGCGCACCCTACCAACGCAAAAACGCCGGTCA
ATAGCTTTCCAGCCCAGGTTTCCGGGCTAATATCGCCGTAACCTACGGAT
GTAACAGTAATCATAGCCCAATATAATCCATTAGCCATATTGTCAATCGT
ACTAGCCTCTGCACCTGATTTCTCGATGATATATATCAAATAAGTTCCAC
CAAACAAGATGATAAAGCCAACAAAGTAACACGTAACTAGTTCCTTTCTA
TGCTTGTACACAACACGACCCATAGTGCGTAGATCACCTCTTTGCCGATC
CAAACGTAAAATACGAAATATCTGTAAGAACCTCGTAATACGTAGGATAG
TAAAGTAAGCAGTTTTGATACTCAGTAAGGCCGTCGTTAGCGTGGACACA
ATAACAAAGAGATCAATCATCATATATAATGTCCTCATGAAGCGAAATTT
GCCGGCATAACCTTTATATTTGCCAAGAAAGCTGCATGACCAAAGGCGCG
CCAAATACTCAACAATAAACCACGATAGCAGTGACAATTCATAATACAAA
ATCAAATCTTTTAGAATTTCATTATCTTCGTACGATTGGATAGTGGATAA
AATACTCGTCACTATACTTCCAACGATAAGTAGAAGGTTCAGTAAATGGT
AACAGATGGCTATTTTGGTTTCCGGTCGCTCCAGAAAGTAGTAGACAATC
TTACGAAGATCTTTGTAACGTGATTTCGCATCCATTGACGTTGCCTCCAT
CAGACTTGCAAGCTCTGTATCCGTACTGCCGGTTAGACTTTTCTTTTTGT
TATGTGCCATTTTTTCTTTATGGTTGTTTTTATACAACCCCCAGAATTTT
TTCTTCTAAAGCCTAAAAGTCTACTCTAAAATGTCTAATTTTGTTGATGT
TTTTTTCACTAAAAAGGAACAGATGAAAACGGAAAGGTTTATGCGATAGA
AATACAGTAAAATTACTTTTGGGACATATCATTGTTATATTACCATGTCA
ATGGCCTTAAAGCTTGTAAATTTACGTGTTGTGGGTTGTCCTTTTGCAGG
AAATCCAATGAGCTCCTATCAGAAGTATCAAAGTTACGCCAGCTTTCTTG
TAATTCTCTCCATTCAAAAATCTGACAAGCTTAGGGTCTTAATAAGCACT
CGAAGAAGATCTGTTAAAAAATTGATGCCCAAACCATACGATGAAGATAG
ACAGACGGACGGACGGAGAACAAGGAAAATTTAGTACGAAGAGAATCTAC
TTCGAGTGTCGCTATGATCCAATACGCCCAGCCCAAAATCAAATACCCCA
AGTAACCCGAAACCAACCGACAACCTTGCATATTTAGTACAAAGTGAATG
AGTGAATACTGAACATTTCAGCNAACCGACAACCTTGCACGTTTAGTACA
AAGTGAATGAATGAATACTGAATATTTCAGTACAGAATGAAACGGTTGAA
AAGCTCCGTGATAAATGATGATATGCGTCTAAAGAAAAGGACTTATCGTT
CGACTTTTTGGTGAGATTTGAAGATTTGTGTCGCAATAACCGACAAAGGT
AATCCATCAACTTTAATGTCAATAACAAATAGAATAAAATAGAATTAACG
ATGTTTAATATTCGATGATTAGCCTGGTACAGCTATATACATACATCATA
AAATAGCGTCAAGAAGATAAAAAAGATTGTTTCTCTACAAATCTTAGGTT
TTACACATACTAAAAAGTACTTAATAATACATATAGTTTATGCCTGAAAA
TGATTCTCTAAAAATGAATGGCTAATACCTTACTAAATAATGAATGGCAT
AAGAGTGAGTCACACAACTGTTCACAAGAGGGATCTTGATAGAGAGCAAA
CCCTTATTAGGATCCGTGACATCTTTCGGGGAGGCAGCCGCATAGTATTG
GTTCAAAAGTGGATACAATTTCATGCCTGGAAAATAATGTATGGCCAAAA
GGATGCCAGTTACAAACAGGTTGATTTAAAACTATATTAATATAGTTTCA
ACTCAATTCCATCGTTTCCATCACATTAAAACTCCTTAAAAATGTTTTTC
AAAAAATGTCCCATACAAGAAGAAAACCGCTCCCCCATTTACCGTGCTTT
AAAGAAAAGAAAATCTAAAGTAAAGATCGTATATGCTATCACATCCTTTA
TTGAAGATAGAAAGGAGAGAAATTCTTTCACATCTAATGGAGAAAGAGCC
AAGAAAATCACAATAACTGTAGATAAGGAAAGGGCGAGTCCATTGAGTTT
CAAGCCCGAAGGACTAGAGATGAGACTCCTGAATGGGAAATGAAACCACT
TATTTCCCATCCAGAACGCCCGCGCGTAGTTTTTTACACAAACACCAGAT
TGAAAATAAAATCTATCGCTAGATTTCAAAAAATGTAGTCCTCCAAAACA
AGGAACCGATAGATACAATCCATCGTTATGATTACGCCTCGTTCTATGTG
CGTTTTGGATGGGAAATAAGTTACTTCAATTTCTCTTGTCTGAGAAGGGT
TAAAGTTTCGCCTCTAGCACTTCGGGCTTGAACACCTCTTGAACCTTGAA
CCACCTCGGTCCTTTTGCCCAGCTGCCCCCCCCCCCGGGCTCTTGAATAT
CTGTGAGGTCTTTAAAGTTTCATGTTCTTCTTGAAAGACATCTTTTTTCC
CTAGATGGGAAACTGCCAAAGCAGTATCTTTACATGAGAAATGATGTCGT
CTAGATAAATGGAAAATGTAAAAAAATATTGATGCATGATAAAATGATTT
GCGCAAGTTCATGCCTTTTTGTCTTTCTTTCTTGAATTACAATACGTGAC
CCACTAAATTGGATTTCCATCAATTTTGAGAACTATTTCGGTCAATGCAC
GAATCAACAAAAGATTTCATAAAAGCGCAAATTTCGGGTTCACTGGAGAA
TCATTTAATGATGTATGTCGTTAAGGCCTTCTCGACAACTCATGTGAAAG
CAACACGCTTTTTTTTATAAGAATACACTTTATAAGAATGTCTATGATGA
GAATGGCCAAAAAATTAAGAATAATGCTAAGTATATCACCATCATGGAAT
TTTGCTGTTCATGCTAAGAATGTCATTTTTAGAGCATTTTCAATTATAAA
TTGCCAATTATACCCCCAAGTAAGGCTCACTCCTTTCACAAAAATGCCAT
TTTATGCTTGAGACGTATGTACTAAATGTTAAATCTAGTCTGAATTAGGA
TCCTAACCTAAGAATGCTGTAGGAATATTTTAAGATGATTTTCCCGAAAA
AGTTAAGAATATCCATGATGAAATGGATTTACACCATTCTTATAAAAAAA
AGCGTGTACACACATAAAATCATCTTCCAACTTGACAGGATCCCCCAACA
ATACATACGGATTGGATTAATAAAACTCAAATATTTTACCTTTGTTGAAT
TTTGACAGTCATCTCAAGATCAATCATCCATCCAATTTCCAAAGACTGAG
TGAAGTTTGGTCGAATATCACTTTAAGATGTAATTTATTAATTTAATAAA
GTATCTGGAAAATAGAAATAGGAAAGAGATTTAAAATGATTTAGGAACGA
AATTTGCGAAAAAAATCTTTCAGAAGACGATAAGAAATAATTCACGCACT
ACTACTACAATGACTTTGCAAATAATTTTTGTTCGTTTTCCCCTTGTCAA
CCAATCATCAGCTGTAAAAGTGACGCAATGACAAAATACATGAATGAATG
CATATTCTTTAGAATTAGAACGAAAAGGCCTGGAGAGTTTGGGAGAATTC
ATGAATCCAAAATTATACAGTCACATCACTGTCCGGCAGTTTGTTTATTT
GTTCATTAGACATTGGTGTACAATAGAGAAGAGGAACTGGACTATAGGTT
TTGCAAGGAAAAAGTCCATATGAAAAAATCTCCGTTCCTTTTTGGGTAAA
TTGTTGCTTGCTCAGTGGGACAGGGGTGTAAAAGTGTATTTGATTTTGGA
GTATTTTTTGAATATTTCTAACCACTATCATATAAAAATGTACTAACAAA
AATGTATAAAGTCTGGAATATAATTTGATAAATACTAACTAAAAGTAAAC
CCGGTATCCTTCTTAACTTGAAAACCTCCGGAACAGTAAAACCTCGATTC
AGTTTTGAAAGGATGATCAGATAAGATCATATATATTTCGAATGGTTATT
GAGGTTTGAAAAAAACACTGCCAGCTAATTTGAAATAGACTTTAAGAGTG
ATACCTCATTGAAAAGATCATTTCTATCGCATTGAAGCTTTAAATCTTCT
AAAAAATTTAAAAATAAAGATTTATTTTCGATTTGATACTTTCGTTTTCA
TCTTCATTTTCAAATTTTCAAAACATTCTCCAAATCTTACATCGATTCGC
TTAAAAGTATCTTTCCAACGAGATATTACTTTTAATTATATCTTTTTTCA
CTCAGGAGCAATTTCAAATTTCGAAAAAAGTACAGAATAGCAATTTTTTT
GCCACAAACTTTCAGTTGACCCTAAAACTGAACACGCTTCCGTTCCAGTC
AAGTAGATAAGTTAATACCGTGTGAAGTTAATTTACGACTTAACCGGAAT
TTTTAATTGTAGACACGATTCTGTGACGTCAATCTCCAAGCGCAAAATTG
TCAACAACCCCGTTAAATTTCGATTAAGAATTAAGAAAATTCTACCCATG
CGAATTGAATTGGATCGATTAGGACGTAATTCAAAATAAAGACAAAATCA
CGCTGGAGATCTTTACGTTATCAAAATCCTGGTGTTTTCAAATTACGAGT
AATGATTACAATTTTTATCTCCTCTCCTAATCAGCCCTTACAGAGACAAA
TTTATTTTGCCATCTTATATTTAAAGGGAGGTTCACGTCTGGTGATAATG
GTGCCAAAAAGTCATTCAAAATCAACTCAGCTCATTAAATAGGAACTCGT
TCTCTAGGGGAATGGGGACGCCAGTTTGCGAGGATTCCAAAGGGTCTCCA
ATATGCAATCTTTTGAGCACTAGCTCTTCTCTTTCAATGATTCGATAGGG
AAGCCTCAAATGTATTGGTTGATCAAGTATCAACATTACTGTTCGTATCA
CATCCAAGACCAGTATCTGTTGGATCCACATCGTCTGATTCTGGATCGAA
GACTTCATTATTTGTCGTAACAACAACACCATTACCGATATGGTCATTTG
CGTCACTACCGCTGGCGTTGCTAGGGATGACAACGCTACCGTTAACGTTG
CCAGGGTCATTAGAGGTATCATTATTTGTGGTAATTACTATTTGTATGTC
ATTGTTATTAACCTCGTCAGCTTCGGAGATGGCTGAAAGATCATAGAACG
TGTCAGTTTCTGAATCAGAGTCTGGCTGTTTATGGAAGTTCACTTGAGGT
GGTGGAAATTTGTGAATTTTAAAAAGTAAAGAACGGAGGGCTCTCATTTC
AAGTTTAACTTGTGTCATTTCATCCTCAATATGTTTTAAATGTGACATTG
TTTCGGTGTGAGCCAACGTATTCTTTTCCATGATGTCTTGAACGTTGACA
AATGGGTATCGAACGTTTTTGAAATGCTTAATGTAGTTGAACAGCTTGAC
TTTCAAAACAAAACGTATGGCTTCTTTATATTGATTATTGATGAGATTGC
AAAGAGGAATGTCATCACCTGGCTGATAATTACTTTTCTTTCGACTATTT
CGTACGCTCCTACGAAGTTTTTGAAACCGTTGTCCACGGCGACTTACATC
ACGATCTCCTTTTTTCTGAACATTTCCATCAGGTCTGGGAACATTCAAAT
TTTGTTTGAATTTCCCCATATTGAAGACTCCACCTTTCTTCTCTTTTCCT
TTGTTAGGGCTATTTGTTTTCGAATCGAGGTTAGATTTGGTCGATCGTGG
CGCATATTTCCCGTCTAAAACATCCTGCATGCCAGGTAAAAGCTTGAAAT
AAGTCAAATTAGCCTCCTCGTCCTTAGGAACTCTCGGGAAGAAGAAAAAC
CAAGTACCTTCTAGATGTTCTTGTTTAGATTTGACGGAATAATATCTCCA
ACATGTTTGAATAACCACAGCAGCCGGGTTACGAACTTTAATGAATCGTA
ATTGCTTCTTTTGTTTAGCGACTTGTAGAGCAAAGCCAGAGCCAAGAATA
CCGGCCGGTAAAGCGAAGAAAGCGCACCCTACCAACGCAAAAACGCCAGT
CATTAGCTTTCCAGCCCACGTTTCCGGGCTAATATCGCCGTAGCCTACAG
ACGTAACAGTTATCATAGCCCAATATAATCCATTAGCCATATTGTCGATC
GTACTGGTCTCTGCGCCCACTTTCTCGATGATATAGATCAAGTAGGTCCC
ACCAAACAAGATGATAAAGCCAACAAAATAACACGTGACTAGTTCCTTGC
CGTGTTTGTAAACTACACGGCCCATAGTGCGTAGATCACCTCTTTGCCGA
TCCAAACGTAAAATACGAAAAATCTGTAGAAACCTCGTAATACGCAGTAT
GGTGAAGTATGCAGTCTGAACANTTGCCGTGTTTGTAAACTACACGGCCC
ATAGTGCGTAGATCACCTCTTTGCCGATCCAAACGTAAAATACGAAAAAT
CTGTAAGAACCTCGTAATACGCAGTATGGTGAAATATGCAGTCTGAACGC
TAAGAATAGCAGTAACAAGTGTTGATATGATAACAAACAAATCAATAGCC
ATGTAAAGAGTTTTCATGAAGCGAATTCTACCACATAAACCTTTGTATTT
GCCAAGGTAGCTGCAAGACCAGAGACGTGCGATATATTCTACAGAGAACC
ATGATAATAGGGCTAGTTCGTAATATAAGATCAAGTTTTTCAGTGTAGTA
CTATCTTCGTACGTGTCAATAGTGGACAATATGCTGGTAACAATACTTCC
CAAAATGAGAACTAGATTCATAAGATGGTACGATATTGCTATATTANGTC
ACAATACTTCCCAAAATGAGAACTAGATTCATGAGATGGTACGATATTGC
TATATTGGAGTTCGGACGCTCCAGAAAGACGTAGACTTTACGGCGTACGT
GTAAATAACGTCCTTTACACGAATTGTCGACGGGTTCAGCGTCCATTAAC
GCCCGTTGTTGTTCAGCAAATAAGTTGGTTTTCAGTTTTGGGACAGCAGA
GATATCCATTGACGCTCCAAACATCTTGGCTTTGAAATTTTGAAGTCTTC
TTGTAATCTGTTTAAACGAGAAAAAT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00003305-exon-sc0000026-1575043694:197713..198848 | TCONS_00003305-exon-sc0000026-1575043694:197713..198848 | Clytia hemisphaerica | exon |
| TCONS_00003305-exon-sc0000026-1575043694:189973..191655 | TCONS_00003305-exon-sc0000026-1575043694:189973..191655 | Clytia hemisphaerica | exon |
| TCONS_00003305-exon-sc0000026-1510915933:197713..198848 | TCONS_00003305-exon-sc0000026-1510915933:197713..198848 | Clytia hemisphaerica | exon |
| TCONS_00003305-exon-sc0000026-1510915933:189973..191655 | TCONS_00003305-exon-sc0000026-1510915933:189973..191655 | Clytia hemisphaerica | exon |
| TCONS_00003305-exon-sc0000026-1491911889:197713..198848 | TCONS_00003305-exon-sc0000026-1491911889:197713..198848 | Clytia hemisphaerica | exon |
| TCONS_00003305-exon-sc0000026-1491911889:189973..191655 | TCONS_00003305-exon-sc0000026-1491911889:189973..191655 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000026 | supercontig | sc0000026:189973..198848 - |
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006813 | potassium ion transport |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0005249 | voltage-gated potassium channel activity |
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0008076 | voltage-gated potassium channel complex |
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
| Category |
Term Accession |
Term Name |
| biological_process |
GO:0006813 |
potassium ion transport |
| cellular_component |
GO:0008076 |
voltage-gated potassium channel complex |
| molecular_function |
GO:0005249 |
voltage-gated potassium channel activity |
Blast
BLAST of TCONS_00003305 vs. Swiss-Prot (Human)
Match: KCNQ3 (Potassium voltage-gated channel subfamily KQT member 3 OS=Homo sapiens GN=KCNQ3 PE=1 SV=2) HSP 1 Score: 192.586 bits (488), Expect = 1.320e-50 Identity = 122/368 (33.15%), Postives = 191/368 (51.90%), Query Frame = -1
Query: 1068 TILRITRFLQIFRILRLDRQRGDLRTMGRVVYKHGKELVTCYFVGFIILFGGTYLIYIIEKVGAETST--------IDNMANGLYWAMITVTSVGYGDISPETWAGKLMTGVFALVGCAFFALPAGILGSGFALQVAKQKKQLRFIKVRNPAAVVIQTCWRYYSVKSKQEHLEGTWFFF-----FPRVPKDEEANLTYFKLLPGMQDVLDGKYAPRSTKS--------NLDSKTNSPNKGKEKKGGVFNMGKFKQNLNVPR----PDGNVQKKGDRDVSRRGQRFQKLXXXXXXXXXXXNYQPGDDIPLCNLINNQYKEAIRFVLKVKLFNYIKHFKNVRYPFVNVQDIMEKNALCHTETLSYLKHIQ 2096
T LR RFLQI R+LR+DR+ G + +G + H KEL+T +++GF+ L ++L+Y++EK E + A+ L+W +IT+ ++GYGD +P+TW G+L+ F+L+G +FFALPAGILGSG AL+V +Q +Q F K R PAA +IQ WRYY+ + L TW F+ FP K++ + KL G+ D + PR + + N+D+ SP+K + K G+ N +F+ + GD RG G+D P+ ++I K AIR V ++ Y K FK P+ +V+D++E+ + H + LS +K++Q
Sbjct: 224 TSLRSLRFLQILRMLRMDRRGGTWKLLGSAICAHSKELITAWYIGFLTLILSSFLVYLVEKDVPEVDAQGEEMKEEFETYADALWWGLITLATIGYGDKTPKTWEGRLIAATFSLIGVSFFALPAGILGSGLALKVQEQHRQKHFEKRRKPAAELIQAAWRYYATNPNRIDLVATWRFYESVVSFPFFRKEQLEAASSQKL--GLLDRVRLS-NPRGSNTKGKLFTPLNVDAIEESPSK-EPKPVGLNNKERFRTAFRMKAYAFWQSSEDAGTGDPMAEDRGY--------------------GNDFPIEDMIPT-LKAAIRAVRILQFRLYKKKFKETLRPY-DVKDVIEQYSAGHLDMLSRIKYLQ 565
The following BLAST results are available for this feature:
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