TCONS_00003300 (transcript) - C. hemisphaerica

Overview
NameTCONS_00003300
Unique NameTCONS_00003300
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1912

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00003300 ID=TCONS_00003300|Name=TCONS_00003300|organism=Clytia hemisphaerica|type=transcript|length=1912bp
AAGGATTCGATTACATAATTTCACCTTTCGATTTGAAATGCCTGTCTAAA
ACGTGTGGTTGGAAGGAATTCTCCATAGCAatcaaatttccaaatttggc
tgaaattatGTACGTGAGTTTAAGTTAGAAAATTCGGTGGGGATTGGAAA
AAGCATAATATTTTACAAGAAACAAAGCAAATGAATTTGGTGCGAAAAAT
GGAGCTTGAACAATCCATTAACAGTGGAGATATGCCATCAGAAGAGAAAA
CTGAAAACAATAATTTCTTCATTAATTTTGAGGACCCAAATACAAGTCCT
GTCGGGCTCCGCGGGGCCGACAGTATCGAAAACTTTGATTCGTATGTTGA
TTTCACTGCGCATAGGACGGAAGGTCGTTCGACTTCATTCCTTACTGACT
GGGCGTTCATGTCTCATGGGATTTTCCAATCGAATGAAATTAACAATCAA
AATACTGTCTTTTCATTGAAACACGTCCCTTCGAATGATCGAAAATCGAA
CGCATTCCTCATGGGAGTAAACCTTCAAAGCATGATTCTGGGTACCAGTG
TTCTTGGTTTCCCTTTCTGCGTCAAAATTGCTGGAGTCTGGGCTCTACTT
GCTATTGTTTTGGTTGGTTTAGCTTCAAGTGCAACGTCAGCAATAATTGG
TGATTGTCAATATCAAAAATCGTTATCAAAACCTGGAGAATTGAAACGAG
TTCATATTTCTTTTGTACAAATGTCTAAAATTTGTATGGGGAAATTTGGT
GCATTTATAATGAAGGTGTTGGTGTATATGAGTTTGCTGAGGAATGTCAT
TGTTGTCATCTTGCTGACAGATCTGACCAAAAACATCTTAACTGAAGTCG
GGATAACAGGCTATGATAAGCGATATTTAACGATAGCTTGGACGCTAGCT
ACCATCCCTCTCCTGTTCATCACTAAAGTTTCTTATCTAGCTTGGATATT
TCATGGAGTTTCGATTTGGAAGGTTTTGGTATTGCCCTTGGCATTATCAT
AAACTCATACTCCGTCCACATGAATTTACCCTCGTTAGAAGGGAGCCTTA
AAAAACCGTCACACTATAAGGCTGCATCACACGTCACATTTCTCTTCAAC
AATATTGTAAAAGTCTCATTTGCTTTGTTTGGCTATTTGACATACACTGA
CACCACAAAACAAGAAATCATTAGTAACGTGACGTCATTCAAACCCTTAC
CAGTTGTTCTACAAATCGCCATCATTTTTTTCACTTATTTCACGGTACCG
ATGCAAAGTTTTGTCGCGTTCGAATTAATTGATAGTTCTTTTCGTCGCCA
CTTTCCACTTCTTGGTAGAAAATCATGGCTGGTTTTAACAAGATTAGTTT
TCATGACTTTAGCTTTGTTAATCGCGATTTTGATTCCACATTTTGGTTTG
GTGGTCAGTTTAATTGGAAGTGTCCGAGGGAGCATGATCACGTTGATTCT
ACCGGCTGCTTATTACGTTATGTTACGGACACACGAAATACAAACACATA
AAGTGGTGGTTAGTTTTGGTATTATCGTTTTTGGTGCAGTTGCTGGCTTG
CTAGGACTCTATTCTTCTATAAAAGCTCTAATTGTAGgcgtcaatttttg
aatttttttgttttcatttccaattttttaagttAGGAAAGTTTATGAGG
GCTATTTCCTACCCTGTAAATTCAGGTCGGTTTCGTTTCTGTTTACGTAC
ATTACTAACAACATTCAGAGAGGATGCAGCGTATGTGTAGTGTATAACCA
TATGGAGCATTCAGCACGCAGTTTTTATTGCAGTCTACAATCGTGGACAA
AACATTTGAGACAAACAGGATTTCCAGGTGAAATTTAAACACcgcaaatg
atttttaagcgcgttaaactacagttggaaagtagagttttaacatgaaa
attcaaaagctc
Run BLAST on NCBI

protein sequence of TCONS_00003300-protein

>TCONS_00003300-protein ID=TCONS_00003300-protein|Name=TCONS_00003300-protein|organism=Clytia hemisphaerica|type=polypeptide|length=273bp
MNLVRKMELEQSINSGDMPSEEKTENNNFFINFEDPNTSPVGLRGADSIE
NFDSYVDFTAHRTEGRSTSFLTDWAFMSHGIFQSNEINNQNTVFSLKHVP
SNDRKSNAFLMGVNLQSMILGTSVLGFPFCVKIAGVWALLAIVLVGLASS
ATSAIIGDCQYQKSLSKPGELKRVHISFVQMSKICMGKFGAFIMKVLVYM
SLLRNVIVVILLTDLTKNILTEVGITGYDKRYLTIAWTLATIPLLFITKV
SYLAWIFHGVSIWKVLVLPLALS
Run BLAST on NCBI

transcript from alignment at sc0000026:125936..131655-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00003300 ID=TCONS_00003300|Name=TCONS_00003300|organism=Clytia hemisphaerica|type=transcript|length=5720bp|location=Sequence derived from alignment at sc0000026:125936..131655- (Clytia hemisphaerica)
AAGGATTCGATTACATAATTTCACCTTTCGATTTGAAATGCCTGTCTAAA
ACGTGTGGTTGGAAGGAATTCTCCATAGCAATCAAATTTCCAAATTTGGC
TGAAATTATGTACGTGAGTTTAAGTTAGAAAATTCGGTGGGGATTGGAAA
AAGCATAATATTTTACAGTGAGGTTTAGTTTATTCGATCATTTTCAGTGG
GGACAAAATTGAAGTATGATATTCCACTGGGACGATATTCTGGCTAATTT
TTTTCAGTAGGAAGGGTCCCAGTGGGTCTGTGAGAAGGGGGTGTCTTTGA
GCCCTAAATTGTTCTTATCCTGTTCTCATTTTCAGGGCAAAACTATGGTA
TTTCAGGGTGTGATTGGCGTGATAATCTATTTTTAACAATTTAATTAAAA
TTTAGCCTTATAAGTCTCAGCATTTATTTCATTTTTTTATTTTTTAGGAT
TTTTGAGCCTCATTGTACTTATAAAATTGTTCACATAATAAAAAGGTGTT
CGAGACTTTGGAAGTTTTGTAAAGCATACCCACAGATATCTGTAAAGCCC
GAAGGGCTAGATAGGCAACTTTAAGCTTTCTTCAGCAAAAAGTGACTTTT
TAAATTTCGTGCCGATGGATAGGATCTAGCCTTTTATGGCTTACTGTATT
TTAAGAAATAAAATATTTCTAGAAATAAAATATTTCTAATTTGTAATTTA
AGAAATATTTTATTTCTTAAAATACGAAAATGAGAAATACCCTNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTTCGTAATT
TAAGTAATGTTCTAGCAGAATTTGCTGACGTCAGCATATGAAGTCAATTT
TTTGTGTTCTAAACTGTCAATACCTGTGCCTTACATCAGTGAAGTGTTAT
GTCATTTGGATCATCCATTGATAAGTTATAAGGGTATTTCTCATTTTCGT
ATTTTAAGAAATAAAATATTTCTTGTATTACAAATTAGAAATATTTTATT
TCTAGAAATATTTTATTTCTTAAAATACAGTAAGCCCATATTGTTTTCAG
AGCGCGAGATCAAAAAAATTAGGCGGCAAACGCGCTATTTCGCATCTCTC
AAACCAGTGAAATTGCTTGTTGTCACCTGCTAGAACAAGATGCTGCGAAA
ACAATGCACATTTTCCAGGCTAAAAATAAATCTTAGTGTAATCTGGCGTG
TAATGAACAATTGGTATCAATTTCAAGGATTTGCCAAAAAAAGATATGAA
TGAACCTAAATGGGCTTTTGTGTGTTGGTACGAGTCTACATTGATTTTTA
ATTCCTTGTAATATTTTACACTCCTCCTTATAAGTTGTTAAAAAGCTGTA
AAAGATAATTCATTGTTGAAGAAAGTTAAGCAATCATCATTTGGCATGAC
AAATAAAAGACTTTATCATGAATCGATGTCGTAAAACACTTGTCACTTTT
TGAAATAATAAAAACAGGTATCATTTTTCGATATTGCATATTCACAGAGG
AGTTGCACATCGCTCATATTAATGCAAAAGTTTTCAATTCAGGCTCTTGA
ATTTCCTGATGAATGAGTTCAAATTTGTGTGTTACTTGAACGCAGTGAGT
GTCAGTACTGGTGAGTGTATATATGAAGGCTTCAGCGTTGTTTGAATTTT
GGCAATGTTTTATTGCCCATGCTTGCTTTCTGGCTTTCAGTGATGAATTT
TGTAAAGAATTTTTGTTGAAATGTGATATTCAGAATCAAAATTTGTTCAA
TATTGGTTTCAATCTGAATTTTATTTTTGATTTCATCTTTTAGTAGTTTT
ACTCGAGCACATTCAAATTTCATTGTGTGAGTGTAGATCTTGTTTGGAAA
TTGTAAACATTCTCTTGTTGGGTAAAATATTTTTTCAGTCTGTCAGTAGC
TTATTTCGTTACATGTTTTGTTTAAAGGAGTTATTTTGGCTCGGCCATTT
TATTTTCTGACCTTTGGAAATTGTTTAGGACTTGAGACTTTGGAGGTTTC
TTGCTAATTTGAGTTATTTCGGCGTTCGGGTCTTAACTGGTTACTTTTTT
GAAGTGGGCTACACGGCTTTTTGCGCAATGTAATTGGTACTTTTCGGATG
ACGACGGGTAACCTATACTAGACGTCACCCGCGTTTGTTGCGACTTTTAT
AAATGTTTCGAGCCCGGGTTTTTGGGTTGAATCTGTGTCCCAGACCTGGT
GGAACTCCCTTTTCGCTGGAAAGTTTGGGTAAAATTTTGTTCCCAGTGGA
CAAATTACTCTACAATTTCAGCCCTTCAGCCCCACTGGGAGATTGATCTC
ATCCCTATTTGGAATTCAATGGAGAAAATAGCACTCCAAAGTCCATCCCC
ACTCCAAAGTCCATCCCACGAGTTTTTTGGCTGAGAACAATAGAATTATA
ATTAGGATTTCCATTGAAATTTTCATCCCCACTGTGGGAAGAAGTTCCAC
CGGGGCTATGAGACAGGGACTTTATATTCATGATATGCACCACTGCAATG
TCTTCTGACATTACATCATAGACCCAATAGCTGATTGGTCTTAAGTGACG
TCAAATCAATCAAAACGTCACTTTGAACCAATCAGCTATTGGGTGGAATG
GAAGACATTGTAATGGTGCATATCATGAATTCGGCTTTAATTAAGGCTTT
CTGGGGTTCTTTCTATATGATAAGGAATTTTGATGATTTTTGAGACCTTT
AGAAAATACAGATGAGGTGACTTTTTGTTATAAATAACCCTTAATTAAAC
TTTTTCTTGATAATCATTATTTTTCTATTGATAGAGAAACAAAGCAAATG
AATTTGGTGCGAAAAATGGAGCTTGAACAATCCATTAACAGTGGAGATAT
GCCATCAGAAGAGAAAACTGAAAACAATAATTTCTTCATTAATTTTGAGG
ACCCAAATACAAGTCCTGTCGGGCTCCGCGGGGCCGACAGTATCGAAAAC
TTTGATTCGTATGTTGATTTCACTGCGCATAGGACGGAAGGTCGTTCGAC
TTCATTCCTTACTGACTGGGCGTTCATGTCTCATGGGATTTTCCAATCGA
ATGAAATTAACAATCAAAATACTGTCTTTTCATTGAAACACGTCCCTTCG
AATGATCGAAAATCGAACGCATTCCTCATGGGAGTAAACCTTCAAAGCAT
GATTCTGGGTACCAGTGTTCTTGGTTTCCCTTTCTGCGTCAAAATTGCTG
GAGTCTGGGCTCTACTTGCTATTGTTTTGGTTGGTTTAGCTTCAAGTGCA
ACGTCAGCAATAATTGGTGATTGTCAATATCAAAAATCGTTATCAAAACC
TGGAGAATTGAAACGAGTTCATATTTCTTTTGTACAAATGTCTAAAATTT
GTATGGGGAAATTTGGTGCATTTATAATGAAGGTGTTGGTGTATATGAGT
TTGCTGAGGAATGTCATTGTTGTCATCTTGCTGACAGATCTGACCAAAAA
CATCTTAACTGAAGTCGGGATAACAGGCTATGATAAGCGATATTTAACGA
TAGCTTGGACGCTAGCTACCATCCCTCTCCTGTTCATCACTAAAGTTTCT
TATCTAGCTTGGGTAAGTTTTATTGGATTGAAACTTTATTTATGCGCGTT
ATTATCAATGCTTGTAATATTTTGTTTGAATTACGACATTTGGAATTTTG
CAGATATTTCATGGAGTTTCGATTTGGAAGGTTTTGGTATTGCCCTTGGC
ATTATCATAAACTCATACTCCGTCCACATGAATTTACCCTCGTTAGAAGG
GAGCCTTAAAAAACCGTCACACTATAAGGCTGCATCACACGTCACATTTC
TCTTCAACAATATTGTAAAAGTCTCATTTGCTTTGTTTGGCTATTTGACA
TACACTGACACCACAAAACAAGAAATCATTAGTAACGTGACGTCATTCAA
ACCCTTACCAGTTGTTCTACAAATCGCCATCATTTTTTTCACTTATTTCA
CGGTACCGATGCAAAGTTTTGTCGCGTTCGAATTAATTGATAGTTCTTTT
CGTCGCCACTTTCCACTTCTTGGTAGAAAATCATGGCTGGTTTTAACAAG
ATTAGTTTTCATGACTTTAGCTTTGTTAATCGCGATTTTGATTCCACATT
TTGGTTTGGTGGTCAGTTTAATTGGAAGTGTCCGAGGGAGCATGATCACG
TTGATTCTACCGGCTGCTTATTACGTTATGTTACGGACACACGAAATACA
AACACATAAAGTGGTGGTTAGTTTTGGTATTATCGTTTTTGGTGCAGTTG
CTGGCTTGCTAGGACTCTATTCTTCTATAAAAGCTCTAATTGTAGGCGTC
AATTTTTGAATTTTTTTGTTTTCATTTCCAATTTTTTAAGTTAGGAAAGT
TTATGAGGGCTATTTCCTACCCTGTAAATTCAGGTCGGTTTCGTTTCTGT
TTACGTACATTACTAACAACATTCAGAGAGGATGCAGCGTATGTGTAGTG
TATAACCATATGGAGCATTCAGCACGCAGTTTTTATTGCAGTCTACAATC
GTGGACAAAACATTTGAGACAAACAGGATTTCCAGGTGAAATTTAAACAC
CGCAAATGATTTTTAAGCGCGTTAAACTACAGTTGGAAAGTAGAGTTTTA
ACATGAAAATTCAAAAGCTC

Coding sequence (CDS) from alignment at sc0000026:125936..131655-

>TCONS_00003300 ID=TCONS_00003300|Name=TCONS_00003300|organism=Clytia hemisphaerica|type=CDS|length=1644bp|location=Sequence derived from alignment at sc0000026:125936..131655- (Clytia hemisphaerica)
ATATTTCATGGAGTTTCGATTTGGAAGGTTTTGGTATTGCCCTTGGCATT
ATCATAAATGAATTTGGTGCGAAAAATGGAGCTTGAACAATCCATTAACA
GTGGAGATATGCCATCAGAAGAGAAAACTGAAAACAATAATTTCTTCATT
AATTTTGAGGACCCAAATACAAGTCCTGTCGGGCTCCGCGGGGCCGACAG
TATCGAAAACTTTGATTCGTATGTTGATTTCACTGCGCATAGGACGGAAG
GTCGTTCGACTTCATTCCTTACTGACTGGGCGTTCATGTCTCATGGGATT
TTCCAATCGAATGAAATTAACAATCAAAATACTGTCTTTTCATTGAAACA
CGTCCCTTCGAATGATCGAAAATCGAACGCATTCCTCATGGGAGTAAACC
TTCAAAGCATGATTCTGGGTACCAGTGTTCTTGGTTTCCCTTTCTGCGTC
AAAATTGCTGGAGTCTGGGCTCTACTTGCTATTGTTTTGGTTGGTTTAGC
TTCAAGTGCAACGTCAGCAATAATTGGTGATTGTCAATATCAAAAATCGT
TATCAAAACCTGGAGAATTGAAACGAGTTCATATTTCTTTTGTACAAATG
TCTAAAATTTGTATGGGGAAATTTGGTGCATTTATAATGAAGGTGTTGGT
GTATATGAGTTTGCTGAGGAATGTCATTGTTGTCATCTTGCTGACAGATC
TGACCAAAAACATCTTAACTGAAGTCGGGATAACAGGCTATGATAAGCGA
TATTTAACGATAGCTTGGACGCTAGCTACCATCCCTCTCCTGTTCATCAC
TAAAGTTTCTTATCTAGCTTGGATATTTCATGGAGTTTCGATTTGGAAGG
TTTTGGTATTGCCCTTGGCATTATCATAAATGAATTTGGTGCGAAAAATG
GAGCTTGAACAATCCATTAACAGTGGAGATATGCCATCAGAAGAGAAAAC
TGAAAACAATAATTTCTTCATTAATTTTGAGGACCCAAATACAAGTCCTG
TCGGGCTCCGCGGGGCCGACAGTATCGAAAACTTTGATTCGTATGTTGAT
TTCACTGCGCATAGGACGGAAGGTCGTTCGACTTCATTCCTTACTGACTG
GGCGTTCATGTCTCATGGGATTTTCCAATCGAATGAAATTAACAATCAAA
ATACTGTCTTTTCATTGAAACACGTCCCTTCGAATGATCGAAAATCGAAC
GCATTCCTCATGGGAGTAAACCTTCAAAGCATGATTCTGGGTACCAGTGT
TCTTGGTTTCCCTTTCTGCGTCAAAATTGCTGGAGTCTGGGCTCTACTTG
CTATTGTTTTGGTTGGTTTAGCTTCAAGTGCAACGTCAGCAATAATTGGT
GATTGTCAATATCAAAAATCGTTATCAAAACCTGGAGAATTGAAACGAGT
TCATATTTCTTTTGTACAAATGTCTAAAATTTGTATGGGGAAATTTGGTG
CATTTATAATGAAGGTGTTGGTGTATATGAGTTTGCTGAGGAATGTCATT
GTTGTCATCTTGCTGACAGATCTGACCAAAAACATCTTAACTGAAGTCGG
GATAACAGGCTATGATAAGCGATATTTAACGATAGCTTGGACGCTAGCTA
CCATCCCTCTCCTGTTCATCACTAAAGTTTCTTATCTAGCTTGG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_001836XLOC_001836Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00003300-proteinTCONS_00003300-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00003300-exon-sc0000026-1575043694:131489..131655TCONS_00003300-exon-sc0000026-1575043694:131489..131655Clytia hemisphaericaexon
TCONS_00003300-exon-sc0000026-1575043694:126994..127771TCONS_00003300-exon-sc0000026-1575043694:126994..127771Clytia hemisphaericaexon
TCONS_00003300-exon-sc0000026-1575043694:125936..126902TCONS_00003300-exon-sc0000026-1575043694:125936..126902Clytia hemisphaericaexon
TCONS_00003300-exon-sc0000026-1510915933:131489..131655TCONS_00003300-exon-sc0000026-1510915933:131489..131655Clytia hemisphaericaexon
TCONS_00003300-exon-sc0000026-1510915933:126994..127771TCONS_00003300-exon-sc0000026-1510915933:126994..127771Clytia hemisphaericaexon
TCONS_00003300-exon-sc0000026-1510915933:125936..126902TCONS_00003300-exon-sc0000026-1510915933:125936..126902Clytia hemisphaericaexon
TCONS_00003300-exon-sc0000026-1491911889:131489..131655TCONS_00003300-exon-sc0000026-1491911889:131489..131655Clytia hemisphaericaexon
TCONS_00003300-exon-sc0000026-1491911889:126994..127771TCONS_00003300-exon-sc0000026-1491911889:126994..127771Clytia hemisphaericaexon
TCONS_00003300-exon-sc0000026-1491911889:125936..126902TCONS_00003300-exon-sc0000026-1491911889:125936..126902Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000026supercontigsc0000026:125936..131655 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
17.8118	15.8254	3.46738	2.03076	0.0281016	0	0.321619	0.300892	0.193107	0.522057	0.75982	0.235897	1.20539	1.70852	2.72076	5.26832	0.469166	0.49251	0.155018	0.278083	0.704971	0.94316	24.4116	21.6074	0.223669	0.469417	2.02619	1.7963	18.6597	18.7523
Blast
[Close]
BLAST of TCONS_00003300 vs. Swiss-Prot (Human)
Match: VIAAT (Vesicular inhibitory amino acid transporter OS=Homo sapiens GN=SLC32A1 PE=2 SV=2)

HSP 1 Score: 110.153 bits (274), Expect = 2.608e-25
Identity = 71/228 (31.14%), Postives = 121/228 (53.07%), Query Frame = 3 
Query:  945 DISWS-----FDLEGFGIALGIIINSYSVHMNLPSLEGSLKKPSHYKAASHVTFLFNNIVKVSFALFGYLTYTDTTKQEIISNVTSFKPLPVVLQIAIIFFTYFTVPMQSFVAFELIDSSF-----RRHFPLL----GR-KSWLVLTRLVFMTLALLIAILIPHFGLVVSLIGSVRGSMITLILPAAYYVMLRTHEIQTHKVVVSFGIIVFGAVAGLLGLYSSIKALI 1583
            D +W       D++ F I++GII+ SY+  + LPSLEG++++PS +    + T +   ++K  FAL  YLT+ D TK+ I  N+     +  V+ I ++     + P+  F A E+++ S      R  FP      GR KSW +  R   +   LL+AI +PHF L++ L GS+ G+ +  +LP+ +++ L   ++  H+V     I V G +  + G   S++ LI
Sbjct:  291 DWAWEKVKFYIDVKKFPISIGIIVFSYTSQIFLPSLEGNMQQPSEFHCMMNWTHIAACVLKGLFALVAYLTWADETKEVITDNLPG--SIRAVVNIFLVAKALLSYPLPFFAAVEVLEKSLFQEGSRAFFPACYSGDGRLKSWGLTLRCALVVFTLLMAIYVPHFALLMGLTGSLTGAGLCFLLPSLFHLRLLWRKLLWHQVFFDVAIFVIGGICSVSGFVHSLEGLI 516
The following BLAST results are available for this feature:
BLAST of TCONS_00003300 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
VIAAT2.608e-2531.14Vesicular inhibitory amino acid transporter OS=Hom... [more]
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