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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00003297 ID=TCONS_00003297|Name=TCONS_00003297|organism=Clytia hemisphaerica|type=transcript|length=1933bp
GAATTTTGAAATAGAATACAAATATCCGATGATCATCAACACACGACAGT
CACACGCACCTGCAGTACAGCGTCAAGTACCAATTGTATATTTCCTTAGC
TTTTCATAAACCAAACGCAGCTGTGGGATACAGAAGAAAGATTTTGGACA
GGCAACTATGGATGTTTAAATTGGAATACCtctcttaaaacaaaagaaga
ggaactttttttgtttattgtgTAGTTTTTAAAGCATTGTTTGTTTCGTT
TTGTTGGGTTCAATACTTATGCAACTGAAGAGATCATCTTTGACCTCCAT
GAAAAAGAGGTCTTGTACATTGCTACAAGAGAAATGGTCAATCGATtcca
ttttgaaattattgaaatCTTTTGCTGATTCTTTGAAGAACTGCGTGAAA
GATCAGAAGTATGAAGAAGCGATCGCTCACTACCAAGAAGCCAGACAACT
CGTCCAACAAGTCAAAATGAGCagccaaactgtccaaaataaAGTCGTCC
TCAACATCGTTGACCAGCTTGGTCATCTGGCGTATGAATTAGGCAACTGG
GCGGAGGCTGAAATCTTACTCAACCAAACATTACATATTATGAAACAATG
TGGTACGACTGAGGAAGAAGACGTGTACATAGAAATTGTTCTTCGACTCG
CTAAAATCGATACCGTATACGAACGAAAAGACGATGCAATCGAGAAATTC
GAATTCTGTATCGCAAACCTGGAATCGAAAATCTCCGTGGTCGATATTTA
CTCGGAAGAATGCTCGGAAcgCATAACTTTATACGGTCTGGTGTTGACCG
AATACGGGACATATACACGGGAAATCGGATTGCTGGACGAATCCGAGAAA
GcattttcaaaagctttaaACATTTGTCGAAACGTTCTTGGCCCTACACA
CGAACAGACTTCAGTTCTGGCGAACGACTTGGCCACAGTGTACGACGAAA
AAGGGCGCTACAACAAAGCTATACGATTGGCCGAGAAAGCTATACGAATC
GCTAGCGAAACTTCACCCGAAAATTTAGCAACTTATAAATACAACCTCGG
ACATATTCTGCTACACAAAGGTGACTTGAAACGTGCACGTAAAGCGTTAC
GCGAAGCTCTTCAAATTGCCGAAGAAAACGACGATCAAGACACTAAAGCG
ATAATCGAGTCCAGCATCATGAAACTCGATCTACCATCTTCCTAGCATTC
GTCTCGATCATTCATCAACTTtgttatataataataatagaGAGAGAACT
TTGTCTCGCTTATTCTTTCTCCTTGTGTAAATACTGCTACTTGATACGAC
GAACGATGAAAGATGCTGGCTGCGTTGCTACAGATTTGAGACCGGAAATG
ATCCAATGCTGTGATGGAAATCTATCACGTGATCGAAATTTCTTGGTAGA
ACTTTTGACCTAACTGAAAGACATGACATTTCATTCTTTTTGGATATATT
CAATCTTTACCAATACCTCGTACAACTACATTTCAGTGTCAATAAATGTG
TATAGTTTTCTACATTGATGCATTCAATATTGTGTGGCTATCTTGATAGA
AAGAATGAGTATTTTTTATCCTGAATTCAAGAAAAGATGACGAAAAAAGA
CACTGTGATAGAGTGCTCAAATATGTGGAGATCATCTCTGCCTTCAGCGc
tctcttgtttttttttcaaagtagaattttcaaatttttattaacaCATA
AATTCGtccttatttttttgtttattattaaatgacattttaattaaaat
gcctttatgaatttccaaaattttatttttcacctGATTTTTAATTGGGT
AGATTCATTCTAATCCAAACActtgaaaaatagaaagttctttTAAAAAC
GACGTAAATGAGATCTTGACAGTAAAACCTTTGGGAAATGCTTTATCCTT
CTATCTTtatgaaagatttcattaaaaCTACCA Run BLAST on NCBI transcript from alignment at sc0000026:955572..966080+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00003297 ID=TCONS_00003297|Name=TCONS_00003297|organism=Clytia hemisphaerica|type=transcript|length=10509bp|location=Sequence derived from alignment at sc0000026:955572..966080+ (Clytia hemisphaerica)
GAATTTTGAAATAGAATACAAATATCCGATGATCATCAACACACGACAGT
CACACGCACCTGCAGTACAGCGTCAAGTACCAATTGTATATTTCCTTAGC
TTTTCATAAACCAAACGCAGCTGTGGGATACAGAAGAAAGATTTTGGACA
GGCAACTATGGATGTTTAAATTGGAATACCtctcttaaaacaaaagaaga
ggaactttttttgtttattgtgTAGTTTTTAAAGCATTGTTTGTTTCGTT
TTGTTGGGTTCAATACTTATGCAACTGAAGAGATCATCTTTGACCTCCAT
GAAAAAGAGGTCTTGTACATTGCTACAAGAGAAATGGTCAATCGATtcca
ttttgaaattattgaaatCTTTTGCTGATTCTTTGAAGGTAAGATAATGA
GTAACCAATAAAGTCCTTGCATGCTGATGTTAGAATAGTTccattgattt
gaaaattatgTGCATTAAAATATTGGTCTCTCGTGAGAACAAAATTCGAG
GTCGAACTTAAATGTTTAATCTTTTTACTGGTTATGAAAGTTTCGACGAA
ATTTCTTAAGACACTGAAGTCCACTTTATGAGCTTGTTGTATTTGGATTA
AGTGAAAACACAGGTTTGAAGAAAGAAAGACAGACACACGACACAGTTCA
ACAGActgatcaaaaacaaaaaaaatcattttgctAAGTTGACGAGAATT
AAACTTGTTTAGCCTGCTTCATCGAATGCTTTGAAACTGTCTGTCCACGC
CACTTCCTGTGTGGAAAAGCTCATTTGTGGTGAGAAATGTTCGTTAAAAC
CGACAGTTCATTAGAATGACGTCAGATGTCTAGTCCAGACAACAGGTTTC
CATAACGAGATACTTATTGCATATATCGGCATATATTAATAACTTAATGA
CGAATTCAATTTCGCCTGGACTACTATGATTTAGCGAATTCGGCCTTTGA
GTTTGGGTTTGAAGCTAAGAGAGGCTCTTCCGCTCAAACTGATGTCCGGA
TTCTAATCTTCCGGATCGTTCATCTGCTTGACAATCgcgtttgtttttct
ttcaaaataccGACCATACCAAATGCTCCTGGTCTACTTCATTGGACCCA
ACGAAGTTCCAACGAAGTTGTAGACTCTGGTCTCCCCTGACATTCTTGCC
CTGAGGAATATTCGGTCCCGAACCCTTTTGCCAAGATGATTGTCCGAACA
GAGCTTGTTTTGCTGATCAATATTATATTATTGACATTTGTTATGAACCT
CCGAATGCTAAAATTTTTGTGTTAAATGATATATGCTTTTGTAGAGAATG
TCAGCTGCACAAATATtcgtactagtaatctcatggttatgagggaaatt
cgggataaatttcccgaggtaaattttgaaattttttgaaatttcccgag
tgcaacgagggaaatttaaaacatttcgaaatttgaccgagggtaattta
tccagaatttcacgaaaacaagcatgagattcctggttaatctcatggtt
tggattgaaactCTAACAATTCTGcaagacgtcaatttaacactggaaat
caatctgaaactttaaaaagaggtctcaaaaaagtcatagaaatgcgaat
cgagttttaattggatagtattccatttNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAagaatttccaaa
cgatggaaatttcacttttgcgggaaattacaaaatctaggagggaaatt
acaaaagctaggagggaaattacaagttcgcgggaaattgcaaattaacg
taagcaaaaacgtcaatcgaatttcaatcaaccatgagattaatcCAGTA
ACATCCTTACAGTGATTTTTCCCGGGGGGCACTCAAGATAAATAAcctac
catacgtgcggcccttaagggtatattttctgagcttcccaaagtgcatg
taagggtcgaaatcagaaaaaaaatgagaaaaatgcactctaagggtgta
aaatttggaaattttgacaaaattttgcctgaaaatggtcaaaaatgttc
aagaaaataCACCATAGGGGTcggtttttcggcaaaattttctctgcact
gtaagggtccgatttcaaaagcctaattttgggccgcacgtatggttgtt
tttgaatcgagtggcCCTCCCCCGGAATTTTTCTCTATGTTTCTAGGTGT
TTGATTTAGTGCCAGTCGTCCTTTATTCTGCATTTGTTTTTGCGCTTGGT
TTGATCAGAATTATGTTACGAACTGCCAGCTATAGATACATCCTGCGTAA
CTTTCTTCTCATCTTTTTTCACCAGAACTGCGTGNATAGATACATCCTGC
ATatcatttttaactttcttCTCATCTTTTTTCACCAGAACTGCGTGAAA
GATCAGAAGTATGAAGAAGCGATCGCTCACTACCAAGAAGCCAGACAACT
CGTCCAACAAGTCAAAATGAGCagccaaactgtccaaaataaAGTCGTCC
TCAACATCGTTGACCAGGTCTGTGCATATATTATAGCTTCCTCTTTTAAA
AGTTCTTTAGAGCATCAAGGGAAGGTATGGAAAATTGCTAACTGTGTGGC
TCAATTGGGTAGCATTTCATTTCACTGCTTTTGTTTGACTTCTACGGGCT
TTCAAACATCACACAATGAAAAGAGACACTCTCtgtgaaaaacaaaaatg
aaccGTCCCCTGTATGACTGAGTGACTCTATAATTTCACCTCATTTTTTT
TCAGCTTGGTCATCTGGCGTATGAATTAGGCAACTGGGCGGAGGTAGGAA
CATACGATTTTGTTTTTCTCCTTGAATGTTGAGATTTTTATACCTCTAAA
TCCTCTTACTTTAACACTTCCTAAAAACTACTGTATTGATAATTagtcct
acacgtttttttataagaacatctagaatttttaaagccttcagatgttc
ttaacttagtCCTAGCCTCTTCAGGTACCGAAATATAGATAGGCAGGTTG
TAtaagtcaaagaaaaaagaaagtaaaactaTCAATCTCTCACACCTTCA
TTTATCTTTATTTATTGTGTGTAGGCTGAAATCTTACTCAACCAAACATT
ACATATTATGAAACAATGTGGTACGACTGAGGTAAGCGAGACaaagtttt
ttatgttttaaagcAAGCGCTGtccattttttcatcttttaaacAGTGAA
AACCAGGCATAAAACTAGCACGCCGGTTTTGTAAATCTGTTCCCACGCCC
GCGTATACTTGGGTTAAACTTCAATTTCATTGAACGAATGATTTTGAATG
ATTTGTACATAGTAAATactattagaaagtaaacatcGCCACATTTCATA
AACATTTAACGGCTTTTAATATAGCCCTAAACGATGATCGCAAATTTTCA
CCCGTGCCGATTCCGTATCAATCCGTAAATCACTTCCTTATCGTTTAaag
aattaaattaaaatgaaatgataAGCAAATAATGAATGAAAACACACTGT
CCCGAAATCTCGTCTATTAAATCTCGACTAATCTTTTCCTTCACAATCCT
CAGTGCGTTTTCGTGAGCTCTCAACCCGTTTCAGGaaaaaatcatacttt
tttggaaagaaaagaaatcataGACGTCCTAGATGTTCCATCCTTAGATA
ACGGTACATATGGAAAGTTAGCCTTGATACACCCATTAAAAACTTCCTGT
ATGGATTAACATTTTGGTATCATGAAAACCAAGCCCCTTACAAATGCTCT
CTCTTTTTCATCACCTTAGGAAGAAGACGTGTACATAGAAATTGTTCTTC
GACTCGCTAAAATCGATACCGTATACGAACGAAAAGACGATGCAATCGAG
AAATTCGAATTCTGTATCGCAAACCTGGAATCGAAAATCTCCGTGGTCGA
TATTTACTCGGAAGAATGCTCGGAAcggtaaaaaacatttttttttactc
GGTATTTACAGCAGAGACGCCCTGATtcgaaaaaagtggattttccgTTT
gcgttcgaattagcgagagacAAAATGCGCTGTCTGAtgattgaaataaa
tttatacTCATTATGTTCTTGTTAATATAACAACATATCTACGAAGGATT
TTCCCAAAATAAGGATATGGGTGCAAAATTTTAAGTATTGACAAGTGAGA
AAAATAATGATCTTGTTAAAGTGTTATGACGAttactaccttaagtggat
aaattttcgcatggataaatttagtccacgcgaaaGTTTTGAAGACcttt
gattcgcgaaaattagtccacgcgaaattatttggaattttacaaTTGCG
AAAAAAAAAGTTCGCGAAATCTAGATAACATGTTACAATCAAAACATATT
ACGAGTTCAACTCATCATTTCAATTATAAACTCTAGTAACCtcctaaaaa
tactttctttgaagttttttgaaagcttttgagtGACTTTGTCTGCCTTA
GTTCGATTAAAAACACACATCTCTTTTCTAGTTACAATTATAGAGTCGCG
AAATTAAGTAAAgaaggccattttcgcgaaatttattccacgcgaaaatt
ttgaagacccttgattcgcgaaatttagtccacgtgaaatctttaaattc
tcgTCTCGCGATAAttagtacacgcgaaaatttatccacttaatgAAGTA
GTAGTTATCAACACATTGCTTTCTTAATTAGCAATTTTTTAAACTTCTTC
GTTCTTTATTTCCAGCATAACTTTATACGGTCTGGTGTTGACCGAATACG
GGACATATACACGGGAAATCGGATTGCTGGACGAATCCGAGAAAGcattt
tcaaaagctttaaACATTTGTCGAAACGTTCTTGGCCCTACACACGAACA
GGTAGGTTAGAAAATAATTTCTCTGTCGTCTTATGTCGGGAACGACAGCG
ATTCATAGAATAAGAACATCTTTTGCGTAGTCTGCAGGCTTAAAAAAACG
GTTCGATTTAACTGAAATGTGGCAAGCCTGATCCTCGGGCGAATTCCTCA
GGTTTTTTTccgtttttcgaatttttttcttccattttttgtGCTTAGGG
AGTAAATTTGGATCCAAAACGAAAAGTATAATCTTAGCCTGACTGCTTAA
GATATTCTCTCAATACTTTAGAATTGTGCTTGAATTAAAAGACATTTTTC
GGGAATTTTTTTGCATGCTTTTGATGTTTCTGTTTCTATCTAAGTTAATT
TTTGAAGTTATTCGATTGATTTCTgctgttctcaacttcagttctcaact
tcagttgagctataatctgagaatgtctgtatgtatgtatgtatgtatgt
atgtatgtatgtatgtatgtatgtatgtatgtccgNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNaggataattacaaggtctcaaaggAAGGTCGACTTTTTCTT
TCTGCCTATCTTCTCTGAGGCTTCTTTctgaccccctggtgacttttcTA
ACTTATTTACTAAGTTTTCTGACTATTCTGAAGTGTTTTAGCTTACCTTG
Aattatcgacccgaccggggttcgaacccactaaatgaaagagtttctga
tcagaaacccagcgcgctatccgttgagccacactcgcacagcagaacac
aaaatttggaNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNaattccaaacaacaaaacccccggaaa
atttttaccttcttttgagaccttgtaattatcctttcCCATTCTAACGC
acataacaaaatgaaaaaattaagataaaaacacccccaggtattcaccc
aaggaacaagtgtaccaaatttcagccaaaacggacaaagtatatttgct
acctaatactaaaTATTTGAAATGTTACAATTGGGCCTTCTAATAACGGG
AAAATCTGAAGTTGAGCCCAGTGCGGTGCACACGTTCGACTATTgagcta
taatctgagaatgtctgtatgtatgtatgtatgtatgtctgtctgtatgt
ccgtccgaaaactttagggcaggctggacacttcaaaaaaggtcggattt
ggctgaaatttggcacacttgctccttgggtgaatatctgggggtgtttt
tttNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNtccgatttgac
tgaaatttggcacacttgttccttgggtgaatatctgggggtgttttttt
cattttttgaaaattttgatttttggggcctggggacgagttgaaatgtt
acaattgggccttctaataacgggaaaatctgaagttgagcccagtgcgg
tgcgcacgttcgactattattGGAAGAGACTCACAATCATAAACGACAGT
CCCGCTGAGGTTTCTTGGATTTAATGATACTAAACACGAGATCGGGAAGT
TTCCAATTCGTGTGATTTAGCACGTAGGAATCGAAACTATTGCTTCCCAT
TCACAAAGTAAATTTCACAAGACACGTGTCTTTTACACCTAGATTTTACT
GATGACTTGATTAGTAATTTGTCTCCTCTCACCACAATCTTGCCCATATT
TTCCATCATTTGAATTATCTTCTTGAATAGCAAACGCAACAATACTCTTC
AAATAATTGATTACAAATAGATTATAAGATATTTGGTCTATCAACCATCT
gaccaaatattttaaaatttttttttgtttcattgttGGATTTAGACTTC
AGTTCTGGCGAACGACTTGGCCACAGTGTACGACGAAAAAGGGCGCTACA
ACAAAGCTATACGATTGGCCGAGAAAGCTATACGAATCGCTAGCGAAACT
TCACCCGAAAATTTAGCAACTTATAAATACAACCTCGGACATATTCTGCT
ACACAAAGGTAATAAgtgatttcaatattttcatctcTTGTTTGGGAAAT
CTTTTAGATGTGATGTTCAAAGCGGCCAgcgaagaaaaatttgaaaaaaa
atgacgaGATTCTACctatactttgatggaaaatatgaaaaagcgTACAC
CAGTCGAAATTGATCATCGGTAATCATGACTGATTGCGCTCCCATAACGG
CTTCCCGTTAGTCTTGAAAGTTTTTAACTAATAGGAAGAGTTATTGGGCC
AGGTAACCCATCATTCATAATCGTAATCATGAAATggctagcgagtttat
gtaagGAATGACTGAAATAGTTGGAACTAACCGCCGTTTTAAACTAAAAG
ATTGCGAACGGTAAAAATGCCAAACTACCGCAGtcttcagtcagtcagga
tttaggcaaataaaaaaactaaatgcCATTGACTACTGTTGATGGAGTGT
TACATTGTAACATAGTAACGTAGTATTTTACCTATTTGAGCACGACTGTA
AATGGGGTGGGGAATTGTTCCATCGCGTGATGTACAGTTCTCGCACCCCT
CTGTTCTTCATGTAATAATTTGTGTTCACTTTTTCTCTGCCTCCAGGTGA
CTTGAAACGTGCACGTAAAGCGTTACGCGAAGCTCTTCAAATTGCCGAAG
AAAACGACGATCAAGACACTAAAGCGATAATCGAGTCCAGCATCATGAAA
CTCGATCTACCATCTTCCTAGCATTCGTCTCGATCATTCATCAACTTtgt
tatataataataatagaGAGAGAACTTTGTCTCGCTTATTCTTTCTCCTT
GTGTAAATACTGCTACTTGATACGACGAACGATGAAAGATGCTGGCTGCG
TTGCTACAGATTTGAGACCGGAAATGATCCAATGCTGTGATGGAAATCTA
TCACGTGATCGAAATTTCTTGGTAGAACTTTTGACCTAACTGAAAGACAT
GACATTTCATTCTTTTTGGATATATTCAATCTTTACCAATACCTCGTACA
ACTACATTTCAGTGTCAATAAATGTGTATAGTTTTCTACATTGATGCATT
CAATATTGTGTGGCTATCTTGATAGAAAGAATGAGTATTTTTTATCCTGA
ATTCAAGAAAAGATGACGAAAAAAGACACTGTGATAGAGTGCTCAAATAT
GTGGAGATCATCTCTGCCTTCAGCGctctcttgtttttttttcaaagtag
aattttcaaatttttattaacaCATAAATTCGtccttatttttttgttta
ttattaaatgacattttaattaaaatgcctttatgaatttccaaaatttt
atttttcacctGATTTTTAATTGGGTAGATTCATTCTAATCCAAACActt
gaaaaatagaaagttctttTAAAAACGACGTAAATGAGATCTTGACAGTA
AAACCTTTGGGAAATGCTTTATCCTTCTATCTTtatgaaagatttcatta
aaaCTACCA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00003297-exon-sc0000026-1491911889:955572..955959 | TCONS_00003297-exon-sc0000026-1491911889:955572..955959 | Clytia hemisphaerica | exon |
| TCONS_00003297-exon-sc0000026-1510915933:955572..955959 | TCONS_00003297-exon-sc0000026-1510915933:955572..955959 | Clytia hemisphaerica | exon |
| TCONS_00003297-exon-sc0000026-1575043694:955572..955959 | TCONS_00003297-exon-sc0000026-1575043694:955572..955959 | Clytia hemisphaerica | exon |
| TCONS_00003297-exon-sc0000026-1491911889:958060..958188 | TCONS_00003297-exon-sc0000026-1491911889:958060..958188 | Clytia hemisphaerica | exon |
| TCONS_00003297-exon-sc0000026-1510915933:958060..958188 | TCONS_00003297-exon-sc0000026-1510915933:958060..958188 | Clytia hemisphaerica | exon |
| TCONS_00003297-exon-sc0000026-1575043694:958060..958188 | TCONS_00003297-exon-sc0000026-1575043694:958060..958188 | Clytia hemisphaerica | exon |
| TCONS_00003297-exon-sc0000026-1491911889:958426..958464 | TCONS_00003297-exon-sc0000026-1491911889:958426..958464 | Clytia hemisphaerica | exon |
| TCONS_00003297-exon-sc0000026-1510915933:958426..958464 | TCONS_00003297-exon-sc0000026-1510915933:958426..958464 | Clytia hemisphaerica | exon |
| TCONS_00003297-exon-sc0000026-1575043694:958426..958464 | TCONS_00003297-exon-sc0000026-1575043694:958426..958464 | Clytia hemisphaerica | exon |
| TCONS_00003297-exon-sc0000026-1491911889:958746..958802 | TCONS_00003297-exon-sc0000026-1491911889:958746..958802 | Clytia hemisphaerica | exon |
| TCONS_00003297-exon-sc0000026-1510915933:958746..958802 | TCONS_00003297-exon-sc0000026-1510915933:958746..958802 | Clytia hemisphaerica | exon |
| TCONS_00003297-exon-sc0000026-1575043694:958746..958802 | TCONS_00003297-exon-sc0000026-1575043694:958746..958802 | Clytia hemisphaerica | exon |
| TCONS_00003297-exon-sc0000026-1491911889:959441..959598 | TCONS_00003297-exon-sc0000026-1491911889:959441..959598 | Clytia hemisphaerica | exon |
| TCONS_00003297-exon-sc0000026-1510915933:959441..959598 | TCONS_00003297-exon-sc0000026-1510915933:959441..959598 | Clytia hemisphaerica | exon |
| TCONS_00003297-exon-sc0000026-1575043694:959441..959598 | TCONS_00003297-exon-sc0000026-1575043694:959441..959598 | Clytia hemisphaerica | exon |
| TCONS_00003297-exon-sc0000026-1491911889:960387..960522 | TCONS_00003297-exon-sc0000026-1491911889:960387..960522 | Clytia hemisphaerica | exon |
| TCONS_00003297-exon-sc0000026-1510915933:960387..960522 | TCONS_00003297-exon-sc0000026-1510915933:960387..960522 | Clytia hemisphaerica | exon |
| TCONS_00003297-exon-sc0000026-1575043694:960387..960522 | TCONS_00003297-exon-sc0000026-1575043694:960387..960522 | Clytia hemisphaerica | exon |
| TCONS_00003297-exon-sc0000026-1491911889:964467..964629 | TCONS_00003297-exon-sc0000026-1491911889:964467..964629 | Clytia hemisphaerica | exon |
| TCONS_00003297-exon-sc0000026-1510915933:964467..964629 | TCONS_00003297-exon-sc0000026-1510915933:964467..964629 | Clytia hemisphaerica | exon |
| TCONS_00003297-exon-sc0000026-1575043694:964467..964629 | TCONS_00003297-exon-sc0000026-1575043694:964467..964629 | Clytia hemisphaerica | exon |
| TCONS_00003297-exon-sc0000026-1491911889:965218..966080 | TCONS_00003297-exon-sc0000026-1491911889:965218..966080 | Clytia hemisphaerica | exon |
| TCONS_00003297-exon-sc0000026-1510915933:965218..966080 | TCONS_00003297-exon-sc0000026-1510915933:965218..966080 | Clytia hemisphaerica | exon |
| TCONS_00003297-exon-sc0000026-1575043694:965218..966080 | TCONS_00003297-exon-sc0000026-1575043694:965218..966080 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000026 | supercontig | sc0000026:955572..966080 + |
Blast
BLAST of TCONS_00003297 vs. Swiss-Prot (Human)
Match: TTC19 (Tetratricopeptide repeat protein 19, mitochondrial OS=Homo sapiens GN=TTC19 PE=1 SV=4) HSP 1 Score: 98.9821 bits (245), Expect = 3.067e-22 Identity = 70/232 (30.17%), Postives = 117/232 (50.43%), Query Frame = 2
Query: 461 VKMSSQTVQNKVVLNIVDQLGHLAYELGNWAEAEILLNQTLHIMKQCGTTEEEDVYIEIVLRLAKIDTVYERKDDAIEKFEFCIANLESKIS-----VVDIYS-EECSERITLYGLVLTEYGTYTREIGLLDESEKAFSKALNICRNVLGPTHEQTSVLANDLATVYDEKGRYNKAIRLAEKAIRIASETSPENLATYKYNLGHILLHKGDLKRARKALREALQIAEENDDQ 1138
++++ QT K + D + +LA+ G AE L T+ + G +E++ IEI L+LA I R++ A+ +EFCI+ LE KI DI S EE + L G+ L Y ++++ + KAL I + G H QT VL +DLAT D +GR+++A ++A +A + + L NL +L+H+ +A++ +EAL+ A+ D+
Sbjct: 123 LRLAYQTDNKKAITYTYDLMANLAFIRGQLENAEQLFKATMSYLLGGGMKQEDNAIIEISLKLASIYAAQNRQEFAVAGYEFCISTLEEKIEREKELAEDIMSVEEKANTHLLLGMCLDACARYLLFSKQPSQAQRMYEKALQISEEIQGERHPQTIVLMSDLATTLDAQGRFDEAYIYMQRASDLARQINHPELHMVLSNLAAVLMHRERYTQAKEIYQEALKQAKLKKDE 354
The following BLAST results are available for this feature:
|
