TCONS_00003264 (transcript) - C. hemisphaerica

Overview
NameTCONS_00003264
Unique NameTCONS_00003264
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length3249

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00003264 ID=TCONS_00003264|Name=TCONS_00003264|organism=Clytia hemisphaerica|type=transcript|length=3249bp
AAAAATGCGAAGTTGGAAATCTGATGAAAATGGCGTTTGATTTTATGAAC
TTTAATTAATGTTAATTATATGagttgatttttgattgaaaatgtataaa
atcttttgtttattGGgattgttcATCCTAGCCTTGCTCCCTCCCACACT
TCACGCAGCGTCTTTAACGGACGAAAATGCCGTCAGCCGAAGTTACGTAA
CCAAGCATTCCCCATCATGGCGTTATTTCAAACTCGCTAACGACGTCAAC
AAAcgtgaaaagttaaaaaaagctTTACGTGATGCTTTGAAATCCGTCGT
AACGGATGAACGTAAAAGCGAAGTTACGACACCGGACGTAGAACGTGGCT
CCGTAAGCCGCATCACGCATGCTGCCATGCTTTTAAAAGAATTCAAGGAG
ATTCACCAACTGTCAGAAACTGTTAAACGCACGCTAACCGATTATAATTC
AGCAAAAAGTAATTTATCACAGACAATAAATGATGACAGGATTGGTCTCT
TGAAGCGATTCCTGGTTGGACGCACCAAGAGAACATTTGTACCTCACGCC
AACGATCCTCTTAAGGATGTGAGTCCACCACAAGTTCGAGACATGGTGCT
TGATAAACCACATTTTTTGAAACATACAGATAAAATATCGGTCATTGCCA
CACCTCTTGAGCAGAAAGGGAAGGTTGGTTTAGAGTTTATTTCCGTTGAC
CCAAAAACTTCAACCGTGGACCGCGCAAGGAAAGCTTTCAAAGCAGCAGA
TATACTTCTTAATTTCGTTGGTAGTCAACAGAAAATAAAAGGAGGTCACG
TGGACGGGCTAATCGAGACATTACGTAAAGATATTGATGGTTTGTATGGG
AAAGAGAGAACAAATTCGGATGACGAAttgaaaaagaagtcattgcttGC
CAGCAGATCCAATAATTTGTTTATTGATAAATCTAACGGTCCGACAAAAT
CAGCGTCCAATCAACGACAAGTGACTGGAACTAAGAAACGTGTGATTGGT
TCAAACGAAAGCGAGGCTATTCAAAATGGTACCACAAGTAGTGAGACGGG
TGAGAAACTTGTCAAGAAAAGTGAATCGGTTattgaacttgaaaaagaaa
aagaggacGAAGTGAAGATAAAATCGGATTTGAAAGTCGGAAAGAAAGAT
GAAGAGATATCGAGTAATGCTGCAGAGCTATTACAGAATCAACTCAAACA
ACAACAGACCTTAAAAACACTAAAAGAAGCCAAATTAGCTCGACGTAAAT
ACGAACTGGCTAGACATGAGTTGGCAGAGAAAGTTAAACAGTTGTATAAA
ATGGCCAACGATTATGAGAAGGAAGAAACAGCCAACCAAGTGTTAGAAGT
GAAAAATGATCATATTCCAAAAGCTCAAAATATTGAACGAAAAACAGATG
ATATTACGCATGCGCCAAATACGAAGCGAGATGACGCGCATCCGGGACTG
GCCCTTTCCGGCGTCACTAACCGTGCGGTCAAGAGGATCTCAACATCTAC
TGAGTCAGATAATGGGGAACATAAAGGCTTTACTATGGGAGCTATCGATA
AGAAGCAACATCTGATTGATTTAGATAAAGCTGTTGAGAAACCTTCCAGT
TCTGTCGAAGCTAAAGCATTTAAAGCTGTTCCTACTAAACGAAAATCTAC
TGACGATAGTCTACCAACAAACTTGAAGCTTGATGAGCTTAAAGATGAAG
TAGGGAAGACCATGAAAAGTCAAGAGGAATCTTTAAAAGTCATTGCACAG
GCTATTAAAGAGGATATGAAGGATATTGCTGACGTtaacaaaaagaagaa
gatggtAGCTGAAGCTATGGGTGgagcaaaaaaagataaacagtCGACTG
ATAAATTGGATGAGTATCTGACCAAAGCATTGACAGATATCATGGGAACA
GATTCTGTCCCTGGGAACGAGGCAGGGAAGGAAGcggaagaaaaacaaaa
agagaaatcGGCCAACATGAAAAACACTAAAgaggaaaatatgaaaatag
tTGCTGAAGCAATGAAGTCTTCAAATAATGATTTACCCTTACCGTTACTC
TCCACTAAAGGCGATAAAATTGTtccaatgaaaaattcaaattccgAAAC
GGGGAAATCTTCACAACGGGATACAAATGATGTCCTACAGCACGTTTCCG
ATCGGAATAAGGGAACCTTGGACATGGCCGATCCTGCAAATAAAGCGCTT
TTAGAAAAAGCGAGTCATTTAGAGGAGCAAGTAGCTGCACAGCAAGATCA
ATTATACAATTCAAAAGGTGGAGATAATGGTCCGGCGCCGGCAAAACCGA
ACGTTGAGTTTACACCCAGTGAACCAAAATCGAATGCAGATACGGTGAAA
ACGGAGGCGACGGCGGTTGCTGGCGGTGGTGGCGGGGAAAAGAAAGACGC
TTATGGTTCGATTAAAGAAACGATTGATAATCCAGCGGAGAAGGAGCGAG
CGACGAATGAAAATGACGAAGAGGAAGATAGAGACGATGATGACGACGAC
CGAGAAGATGACGATGATGACGAAAGAAATTACCATCATCCACGACATCA
CTATGACGATGACGAGGACGATCgtgatgatgatgaagaagacGACCGTT
ACGATAAACGACATCACGTGCGTCATCATCGGTCTCGTTTCCATGATGAG
GTTGCTAAAAAACGATCATTCAACGATCGACCCAATGAAGCGCCAAATAA
ACCAAAAGATGAACTAGAAGACGTGAAAGTGGAAAGACATTTTGATGATT
TGGAAGATAATTGACAGAAATGGTGATGAGTTGAATATGTTAGTCGGTTC
ATAATCCGTAGCATAGCGACATGCTCACGTCACCTAACTAGCTGAAACGT
CCGTTTATCTTTCATAATGTCCAAAGCAAGATGAACGTTTGAATATGTAA
CACTGTTTCCGACGACGTTGGCAAATCAAAGGAAGGTTTAACAAGAAGAA
TTAAGACTCATTCCGAACTTAGCATAACGAGCGATGTTTGGAGCATGATT
TTCTTTAATGAAAGTTAGCACTTAATGTAATCTTAATGTAGAGATAAAGA
AGAATTTACATCCAATGGATGGCGATAGTGTCGATATTGCTCTTTTGAAA
GTGATTCTTCAGGTTACGAAGTGAAGAACCTCTGACGATAAGTGCTTCGT
GGGGGCCCCCactagtagagggcattttgtaaaatcgctcgactgttttg
ttagaagcacttgttatacatttttggaaagctaaggggtaggggaatc
Run BLAST on NCBI

protein sequence of TCONS_00003264-protein

>TCONS_00003264-protein ID=TCONS_00003264-protein|Name=TCONS_00003264-protein|organism=Clytia hemisphaerica|type=polypeptide|length=890bp
MYKIFCLLGLFILALLPPTLHAASLTDENAVSRSYVTKHSPSWRYFKLAN
DVNKREKLKKALRDALKSVVTDERKSEVTTPDVERGSVSRITHAAMLLKE
FKEIHQLSETVKRTLTDYNSAKSNLSQTINDDRIGLLKRFLVGRTKRTFV
PHANDPLKDVSPPQVRDMVLDKPHFLKHTDKISVIATPLEQKGKVGLEFI
SVDPKTSTVDRARKAFKAADILLNFVGSQQKIKGGHVDGLIETLRKDIDG
LYGKERTNSDDELKKKSLLASRSNNLFIDKSNGPTKSASNQRQVTGTKKR
VIGSNESEAIQNGTTSSETGEKLVKKSESVIELEKEKEDEVKIKSDLKVG
KKDEEISSNAAELLQNQLKQQQTLKTLKEAKLARRKYELARHELAEKVKQ
LYKMANDYEKEETANQVLEVKNDHIPKAQNIERKTDDITHAPNTKRDDAH
PGLALSGVTNRAVKRISTSTESDNGEHKGFTMGAIDKKQHLIDLDKAVEK
PSSSVEAKAFKAVPTKRKSTDDSLPTNLKLDELKDEVGKTMKSQEESLKV
IAQAIKEDMKDIADVNKKKKMVAEAMGGAKKDKQSTDKLDEYLTKALTDI
MGTDSVPGNEAGKEAEEKQKEKSANMKNTKEENMKIVAEAMKSSNNDLPL
PLLSTKGDKIVPMKNSNSETGKSSQRDTNDVLQHVSDRNKGTLDMADPAN
KALLEKASHLEEQVAAQQDQLYNSKGGDNGPAPAKPNVEFTPSEPKSNAD
TVKTEATAVAGGGGGEKKDAYGSIKETIDNPAEKERATNENDEEEDRDDD
DDDREDDDDDERNYHHPRHHYDDDEDDRDDDEEDDRYDKRHHVRHHRSRF
HDEVAKKRSFNDRPNEAPNKPKDELEDVKVERHFDDLEDN
Run BLAST on NCBI

transcript from alignment at sc0000026:227826..232899+

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00003264 ID=TCONS_00003264|Name=TCONS_00003264|organism=Clytia hemisphaerica|type=transcript|length=5074bp|location=Sequence derived from alignment at sc0000026:227826..232899+ (Clytia hemisphaerica)
AAAAATGCGAAGTTGGAAATCTGATGAAAATGGCGTTTGATTTTATGAAC TTTAATTAATGTTAATTATATGagttgatttttgattgaaaatgtataaa atcttttgtttattGGGTGAGTCtttgtaaaattgttcttataaagaaat gaaaTGGGATGCTAATGAATAATGGTTCGGGCTGCCAGGAAGGAAATTAC GGGGAGACATTTTTCTGAAGTAGCTCTAAAGATTTTATCGACTTATGTAT CGTTTATCTCAATCAAGTGATTTCCCTTAGCCATTGTTTTTAAGACCTAA TGCTAGGCCTCGATAGGATACAcattgttttataagaacaaactatataa gaacataaggcttcgatgacatGTTAAGACAtattgttaagaatattttt aagcttaaaactctaaaggttaagaacatccgaaggcttcaaaattttta gaagtTCTTGAAACGTGTATTGAGTTTAAGTTCgtgtatttttctttctt tttcaggattgttcATCCTAGCCTTGCTCCCTCCCACACTTCACGCAGCG TCTTTAACGGACGAAAATGCCGTCAGCCGAAGTTACGTAACCAAGCATTC CCCATCATGGCGTTATTTCAAACTCGCTAACGACGTCAACAAAcgtgaaa agttaaaaaaagctTTACGTGATGCTTTGAAATCCGTCGTAACGGATGAA CGTAAAAGCGAAGTTACGACACCGGACGTAGAACGTGGCTCCGTAAGCCG CATCACGCATGCTGCCATGCTTTTAAAAGAATTCAAGGAGATTCACCAAC TGTCAGAAACTGTTAAACGCACGCTAACCGATTATAATTCAGCAAAAAGT AATTTATCACAGACAATAAATGATGACAGGATTGGTCTCTTGAAGCGATT CCTGGTTGGACGCACCAAGAGAACATTTGTACCTCACGCCAACGATCCTC TTAAGGATGTGAGTCCACCACAAGTTCGAGACATGGTGCTTGATAAACCA CATTTTTTGAAACATACAGATAAAATATCGGTCATTGCCACACCTCTTGA GCAGAAAGGGAAGGTTGGTTTAGAGTTTATTTCCGTTGACCCAAAAACTT CAACCGTGGACCGCGCAAGGAAAGCTTTCAAAGCAGCAGATATACTTCTT AATTTCGTTGGTAGTCAACAGAAAATAAAAGGAGGTCACGTGGACGGGCT AATCGAGACATTACGTAAAGATATTGATGGTTTGTATGGGAAAGAGAGAA CAAATTCGGATGACGAAttgaaaaagaagtcattgcttGCCAGCAGATCC AATAATTTGTTTATTGATAAATCTAACGGTCCGACAAAATCAGCGTCCAA TCAACGACAAGTGACTGGAACTAAGAAACGTGTGATTGGTTCAAACGAAA GCGAGGCTATTCAAAATGGTACCACAAGTAGTGAGACGGGTGAGAAACTT GTCAAGAAAAGTGAATCGGTTattgaacttgaaaaagaaaaagaggacGA AGTGAAGATAAAATCGGATTTGAAAGTCGGAAAGAAAGATGAAGAGATAT CGAGTAATGCTGCAGAGCTATTACAGAATCAACTCAAACAACAACAGACC TTAAAAACACTAAAAGAAGCCAAATTAGCTCGACGTAAATACGAACTGGC TAGACATGAGTTGGCAGAGAAAGTTAAACAGTTGTATAAAATGGCCAACG ATTATGAGAAGGAAGAAACAGCCAACCAAGTGTTAGAAGTGAAAAATGAT CATATTCCAAAAGCTCAAAATATTGAACGAAAAACAGATGATATTACGCA TGCGCCAAATACGAAGCGAGATGACGCGCATCCGGGACTGGCCCTTTCCG GCGTCACTAACCGTGCGGTCAAGAGGATCTCAACATCTACTGAGTCAGAT AATGGGGAACATAAAGGCTTTACTATGGGAGCTATCGATAAGAAGCAACA TCTGATTGATTTAGATAAAGCTGTTGAGAAACCTTCCAGTTCTGTCGAAG CTAAAGCATTTAAAGCTGTTCCTACTAAACGAAAATCTACTGACGATAGT CTACCAACAAACTTGAAGCTTGATGAGCTTAAAGATGAAGTAGGGAAGAC CATGAAAAGTCAAGAGGAATCTTTAAAAGTCATTGCACAGGCTATTAAAG AGGATATGAAGGATATTGCTGACGTtaacaaaaagaagaagatggtAGCT GAAGCTATGGGTGgagcaaaaaaagataaacagtCGACTGATAAATTGGA TGAGTATCTGACCAAAGCATTGACAGATATCATGGGAACAGATTCTGTCC CTGGGAACGAGGCAGGGAAGGAAGcggaagaaaaacaaaaagagaaatcG GCCAACATGAAAAACACTAAAgaggaaaatatgaaaatagtTGCTGAAGC AATGAAGTCTTCAAATAATGATTTACCCTTACCGTTACTCTCCACTAAAG GCGATAAAATTGTtccaatgaaaaattcaaattccgAAACGGGGAAATCT TCACAACGGGATACAAATGATGTCCTACAGCACGTTTCCGATCGGAATAA GGGAACCTTGGACATGGCCGATCCTGCAAATAAAGCGCTTTTAGAAAAAG CGAGTCATTTAGAGGAGCAAGTAGCTGCACAGCAAGATCAATTATACAAT TCAAAAGGTGGAGATAATGGTCCGGCGCCGGCAAAACCGAACGTTGAGTT TACACCCAGTGAACCAAAATCGAATGCAGATACGGTGAAAACGGAGGCGA CGGCGGTTGCTGGCGGTGGTGGCGGGGAAAAGAAAGACGCTTATGGTTCG ATTAAAGAAACGATTGATAATCCAGCGGAGAAGGAGCGAGCGACGAATGA AAATGACGAAGAGGAAGATAGAGACGATGGTGAGTGAACgatttgtgtga aaaaaaattagacttCCCATTGCCCGAGTCTCAGTCTACAGCCCAAATGA ATGAGTTTTATCGTCCCTTGTGAaccaatcttgttaaaaatgtaCCCTCT CTTTTTTTTGTAGTAGACTTTCCATTGCTAGAGCTCCAGTCTACATCCCA AATATCTTGTTAAGTTTTATCGAAGAGCAAGTCTATATCATTCGAATTTT CCATCACTTGAACAAATTTTAATTTCCCGGGTGTGGAAAACTGTGGAGAC TGTGAATGTGTTCTGTTTGGGTCAGAGAGACCAGGAACCCTCTTACGGAA TTCAGTGCATTTCTTGAGATTCTTCACGTAcgaccccttttatgttgaat tttccaAATCGATTTTTTGTCATCTCACCATGGTCCAGTGGGCCAAAAAA AACCTCAGACACCAAGATTTTGAGCCCACTGTTTTGACATGGATAATAAA AAATCGAACAGTTGAAATTGACAACTgtcataccttatcggggaaaaaaa tgtcgggggaaagtgacgaaaatttgagggggtgacgaaattttcccccg acgaatttcttccccgatattttatcacccgatttttcaaaccccaacca aaattaaaattaaaatttttcacacctttattaaccgaaattagtgcttt aaacgtcgaattacaagatcttttttcgagctagtgaaggaaacgatttc atttggacaatttattCGGTTtgaagtgactaaattgtaaatttcgtcgg ggaaaagtgacgaatttgaaattttggtcgggggaaagtgacgaaaatgc ctctaggtgacaaaatttttccccgacgaaaagaAACCCCGACTAAGTAA AACTCCGATATTTTTTCTCCGATAAGGTATACTACCGGttcacttaatcg cgccatccagtttATCAAAAAGCTTAAAGTGGACCCTGGGTTAATGAAAG GCCCAGGAAATGTATTTTTTCTCCTCCATTATGCAGATGACGACGACCGA GAAGATGACGATGATGACGAAAGAAATTACCATCATCCACGACATCACTA TGACGATGACGAGGTTTGTCGAGTTTTCTAACGTCAATTATTTACGTGAC TTGTAAAAATCACGCCCTTATTGTTCACTTGTTCGACTCTGAATGACATA TGCTTAAAATTTGGTTCTTGATATgccaaatatttgaaaaatctgtgTCA AATGTTTAGTCAATAGGAAAATGCTAAGAATCATTCAGCCTCAGGTAGAC CTGTTAGGGTCTTCGAGGAATCAATGTCAGTATTTCTCTTTCTCATATGT ACTATGATTCACTCTAAAGgccatggctccgtaagagaatctgcccaggt tggcgcattgctttgatttttttcatccacATTTGGGATGAATATTAAGT GATCTTTCGAGCGCAGTGGTTGgttaaagcaaaacaatcgaacattgcac caaaatcaaaacataaacaaaacatAAATTCTTCTTTTCAGGACGATCgt gatgatgatgaagaagacGACCGTTACGATAAACGACATCACGTGCGTCA TCATCGGTCTCGTTTCCATGATGAGGTTGCTAAAAAACGATCATTCAACG ATCGACCCAATGAAGCGCCAAATAAACCAAAAGATGAACTAGAAGACGTG AAAGTGGAAAGACATTTTGATGATTTGGAAGATAATTGACAGAAATGGTG ATGAGTTGAATATGTTAGTCGGTTCATAATCCGTAGCATAGCGACATGCT CACGTCACCTAACTAGCTGAAACGTCCGTTTATCTTTCATAATGTCCAAA GCAAGATGAACGTTTGAATATGTAACACTGTTTCCGACGACGTTGGCAAA TCAAAGGAAGGTTTAACAAGAAGAATTAAGACTCATTCCGAACTTAGCAT AACGAGCGATGTTTGGAGCATGATTTTCTTTAATGAAAGTTAGCACTTAA TGTAATCTTAATGTAGAGATAAAGAAGAATTTACATCCAATGGATGGCGA TAGTGTCGATATTGCTCTTTTGAAAGTGATTCTTCAGGTTACGAAGTGAA GAACCTCTGACGATAAGTGCTTCGTGGGGGCCCCCactagtagagggcat tttgtaaaatcgctcgactgttttgttagaagcacttgttatacattttt ggaaagctaaggggtaggggaatc

Coding sequence (CDS) from alignment at sc0000026:227826..232899+

>TCONS_00003264 ID=TCONS_00003264|Name=TCONS_00003264|organism=Clytia hemisphaerica|type=CDS|length=10692bp|location=Sequence derived from alignment at sc0000026:227826..232899+ (Clytia hemisphaerica)
atgtataaaatcttttgtttattGGgattgttcATCCTAGCCTTGCTCCC
TCCCACACTTCACGCAGCGTCTTTAACGGACGAAAATGCCGTCAGCCGAA
GTTACGTAACCAAGCATTCCCCATCATGGCGTTATTTCAAACTCGCTAAC
GACGTCAACAAAcgtgaaaagttaaaaaaagctTTACGTGATGCTTTGAA
ATCCGTCGTAACGGATGAACGTAAAAGCGAAGTTACGACACCGGACGTAG
AACGTGGCTCCGTAAGCCGCATCACGCATGCTGCCATGCTTTTAAAAGAA
TTCAAGGAGATTCACCAACTGTCAGAAACTGTTAAACGCACGCTAACCGA
TTATAATTCAGCAAAAAGTAATTTATCACAGACAATAAATGATGACAGGA
TTGGTCTCTTGAAGCGATTCCTGGTTGGACGCACCAAGAGAACATTTGTA
CCTCACGCCAACGATCCTCTTAAGGATGTGAGTCCACCACAAGTTCGAGA
CATGGTGCTTGATAAACCACATTTTTTGAAACATACAGATAAAATATCGG
TCATTGCCACACCTCTTGAGCAGAAAGGGAAGGTTGGTTTAGAGTTTATT
TCCGTTGACCCAAAAACTTCAACCGTGGACCGCGCAAGGAAAGCTTTCAA
AGCAGCAGATATACTTCTTAATTTCGTTGGTAGTCAACAGAAAATAAAAG
GAGGTCACGTGGACGGGCTAATCGAGACATTACGTAAAGATATTGATGGT
TTGTATGGGAAAGAGAGAACAAATTCGGATGACGAAttgaaaaagaagtc
attgcttGCCAGCAGATCCAATAATTTGTTTATTGATAAATCTAACGGTC
CGACAAAATCAGCGTCCAATCAACGACAAGTGACTGGAACTAAGAAACGT
GTGATTGGTTCAAACGAAAGCGAGGCTATTCAAAATGGTACCACAAGTAG
TGAGACGGGTGAGAAACTTGTCAAGAAAAGTGAATCGGTTattgaacttg
aaaaagaaaaagaggacGAAGTGAAGATAAAATCGGATTTGAAAGTCGGA
AAGAAAGATGAAGAGATATCGAGTAATGCTGCAGAGCTATTACAGAATCA
ACTCAAACAACAACAGACCTTAAAAACACTAAAAGAAGCCAAATTAGCTC
GACGTAAATACGAACTGGCTAGACATGAGTTGGCAGAGAAAGTTAAACAG
TTGTATAAAATGGCCAACGATTATGAGAAGGAAGAAACAGCCAACCAAGT
GTTAGAAGTGAAAAATGATCATATTCCAAAAGCTCAAAATATTGAACGAA
AAACAGATGATATTACGCATGCGCCAAATACGAAGCGAGATGACGCGCAT
CCGGGACTGGCCCTTTCCGGCGTCACTAACCGTGCGGTCAAGAGGATCTC
AACATCTACTGAGTCAGATAATGGGGAACATAAAGGCTTTACTATGGGAG
CTATCGATAAGAAGCAACATCTGATTGATTTAGATAAAGCTGTTGAGAAA
CCTTCCAGTTCTGTCGAAGCTAAAGCATTTAAAGCTGTTCCTACTAAACG
AAAATCTACTGACGATAGTCTACCAACAAACTTGAAGCTTGATGAGCTTA
AAGATGAAGTAGGGAAGACCATGAAAAGTCAAGAGGAATCTTTAAAAGTC
ATTGCACAGGCTATTAAAGAGGATATGAAGGATATTGCTGACGTtaacaa
aaagaagaagatggtAGCTGAAGCTATGGGTGgagcaaaaaaagataaac
agtCGACTGATAAATTGGATGAGTATCTGACCAAAGCATTGACAGATATC
ATGGGAACAGATTCTGTCCCTGGGAACGAGGCAGGGAAGGAAGcggaaga
aaaacaaaaagagaaatcGGCCAACATGAAAAACACTAAAgaggaaaata
tgaaaatagtTGCTGAAGCAATGAAGTCTTCAAATAATGATTTACCCTTA
CCGTTACTCTCCACTAAAGGCGATAAAATTGTtccaatgaaaaattcaaa
ttccgAAACGGGGAAATCTTCACAACGGGATACAAATGATGTCCTACAGC
ACGTTTCCGATCGGAATAAGGGAACCTTGGACATGGCCGATCCTGCAAAT
AAAGCGCTTTTAGAAAAAGCGAGTCATTTAGAGGAGCAAGTAGCTGCACA
GCAAGATCAATTATACAATTCAAAAGGTGGAGATAATGGTCCGGCGCCGG
CAAAACCGAACGTTGAGTTTACACCCAGTGAACCAAAATCGAATGCAGAT
ACGGTGAAAACGGAGGCGACGGCGGTTGCTGGCGGTGGTGGCGGGGAAAA
GAAAGACGCTTATGGTTCGATTAAAGAAACGATTGATAATCCAGCGGAGA
AGGAGCGAGCGACGAATGAAAATGACGAAGAGGAAGATAGAGACGATGAT
GACGACGACCGAGAAGATGACGATGATGACGAAAGAAATTACCATCATCC
ACGACATCACTATGACGATGACGAGGACGATCgtgatgatgatgaagaag
acGACCGTTACGATAAACGACATCACGTGCGTCATCATCGGTCTCGTTTC
CATGATGAGGTTGCTAAAAAACGATCATTCAACGATCGACCCAATGAAGC
GCCAAATAAACCAAAAGATGAACTAGAAGACGTGAAAGTGGAAAGACATT
TTGATGATTTGGAAGATAATTGAatgtataaaatcttttgtttattGGga
ttgttcATCCTAGCCTTGCTCCCTCCCACACTTCACGCAGCGTCTTTAAC
GGACGAAAATGCCGTCAGCCGAAGTTACGTAACCAAGCATTCCCCATCAT
GGCGTTATTTCAAACTCGCTAACGACGTCAACAAAcgtgaaaagttaaaa
aaagctTTACGTGATGCTTTGAAATCCGTCGTAACGGATGAACGTAAAAG
CGAAGTTACGACACCGGACGTAGAACGTGGCTCCGTAAGCCGCATCACGC
ATGCTGCCATGCTTTTAAAAGAATTCAAGGAGATTCACCAACTGTCAGAA
ACTGTTAAACGCACGCTAACCGATTATAATTCAGCAAAAAGTAATTTATC
ACAGACAATAAATGATGACAGGATTGGTCTCTTGAAGCGATTCCTGGTTG
GACGCACCAAGAGAACATTTGTACCTCACGCCAACGATCCTCTTAAGGAT
GTGAGTCCACCACAAGTTCGAGACATGGTGCTTGATAAACCACATTTTTT
GAAACATACAGATAAAATATCGGTCATTGCCACACCTCTTGAGCAGAAAG
GGAAGGTTGGTTTAGAGTTTATTTCCGTTGACCCAAAAACTTCAACCGTG
GACCGCGCAAGGAAAGCTTTCAAAGCAGCAGATATACTTCTTAATTTCGT
TGGTAGTCAACAGAAAATAAAAGGAGGTCACGTGGACGGGCTAATCGAGA
CATTACGTAAAGATATTGATGGTTTGTATGGGAAAGAGAGAACAAATTCG
GATGACGAAttgaaaaagaagtcattgcttGCCAGCAGATCCAATAATTT
GTTTATTGATAAATCTAACGGTCCGACAAAATCAGCGTCCAATCAACGAC
AAGTGACTGGAACTAAGAAACGTGTGATTGGTTCAAACGAAAGCGAGGCT
ATTCAAAATGGTACCACAAGTAGTGAGACGGGTGAGAAACTTGTCAAGAA
AAGTGAATCGGTTattgaacttgaaaaagaaaaagaggacGAAGTGAAGA
TAAAATCGGATTTGAAAGTCGGAAAGAAAGATGAAGAGATATCGAGTAAT
GCTGCAGAGCTATTACAGAATCAACTCAAACAACAACAGACCTTAAAAAC
ACTAAAAGAAGCCAAATTAGCTCGACGTAAATACGAACTGGCTAGACATG
AGTTGGCAGAGAAAGTTAAACAGTTGTATAAAATGGCCAACGATTATGAG
AAGGAAGAAACAGCCAACCAAGTGTTAGAAGTGAAAAATGATCATATTCC
AAAAGCTCAAAATATTGAACGAAAAACAGATGATATTACGCATGCGCCAA
ATACGAAGCGAGATGACGCGCATCCGGGACTGGCCCTTTCCGGCGTCACT
AACCGTGCGGTCAAGAGGATCTCAACATCTACTGAGTCAGATAATGGGGA
ACATAAAGGCTTTACTATGGGAGCTATCGATAAGAAGCAACATCTGATTG
ATTTAGATAAAGCTGTTGAGAAACCTTCCAGTTCTGTCGAAGCTAAAGCA
TTTAAAGCTGTTCCTACTAAACGAAAATCTACTGACGATAGTCTACCAAC
AAACTTGAAGCTTGATGAGCTTAAAGATGAAGTAGGGAAGACCATGAAAA
GTCAAGAGGAATCTTTAAAAGTCATTGCACAGGCTATTAAAGAGGATATG
AAGGATATTGCTGACGTtaacaaaaagaagaagatggtAGCTGAAGCTAT
GGGTGgagcaaaaaaagataaacagtCGACTGATAAATTGGATGAGTATC
TGACCAAAGCATTGACAGATATCATGGGAACAGATTCTGTCCCTGGGAAC
GAGGCAGGGAAGGAAGcggaagaaaaacaaaaagagaaatcGGCCAACAT
GAAAAACACTAAAgaggaaaatatgaaaatagtTGCTGAAGCAATGAAGT
CTTCAAATAATGATTTACCCTTACCGTTACTCTCCACTAAAGGCGATAAA
ATTGTtccaatgaaaaattcaaattccgAAACGGGGAAATCTTCACAACG
GGATACAAATGATGTCCTACAGCACGTTTCCGATCGGAATAAGGGAACCT
TGGACATGGCCGATCCTGCAAATAAAGCGCTTTTAGAAAAAGCGAGTCAT
TTAGAGGAGCAAGTAGCTGCACAGCAAGATCAATTATACAATTCAAAAGG
TGGAGATAATGGTCCGGCGCCGGCAAAACCGAACGTTGAGTTTACACCCA
GTGAACCAAAATCGAATGCAGATACGGTGAAAACGGAGGCGACGGCGGTT
GCTGGCGGTGGTGGCGGGGAAAAGAAAGACGCTTATGGTTCGATTAAAGA
AACGATTGATAATCCAGCGGAGAAGGAGCGAGCGACGAATGAAAATGACG
AAGAGGAAGATAGAGACGATGATGACGACGACCGAGAAGATGACGATGAT
GACGAAAGAAATTACCATCATCCACGACATCACTATGACGATGACGAGGA
CGATCgtgatgatgatgaagaagacGACCGTTACGATAAACGACATCACG
TGCGTCATCATCGGTCTCGTTTCCATGATGAGGTTGCTAAAAAACGATCA
TTCAACGATCGACCCAATGAAGCGCCAAATAAACCAAAAGATGAACTAGA
AGACGTGAAAGTGGAAAGACATTTTGATGATTTGGAAGATAATTGAatgt
ataaaatcttttgtttattGGgattgttcATCCTAGCCTTGCTCCCTCCC
ACACTTCACGCAGCGTCTTTAACGGACGAAAATGCCGTCAGCCGAAGTTA
CGTAACCAAGCATTCCCCATCATGGCGTTATTTCAAACTCGCTAACGACG
TCAACAAAcgtgaaaagttaaaaaaagctTTACGTGATGCTTTGAAATCC
GTCGTAACGGATGAACGTAAAAGCGAAGTTACGACACCGGACGTAGAACG
TGGCTCCGTAAGCCGCATCACGCATGCTGCCATGCTTTTAAAAGAATTCA
AGGAGATTCACCAACTGTCAGAAACTGTTAAACGCACGCTAACCGATTAT
AATTCAGCAAAAAGTAATTTATCACAGACAATAAATGATGACAGGATTGG
TCTCTTGAAGCGATTCCTGGTTGGACGCACCAAGAGAACATTTGTACCTC
ACGCCAACGATCCTCTTAAGGATGTGAGTCCACCACAAGTTCGAGACATG
GTGCTTGATAAACCACATTTTTTGAAACATACAGATAAAATATCGGTCAT
TGCCACACCTCTTGAGCAGAAAGGGAAGGTTGGTTTAGAGTTTATTTCCG
TTGACCCAAAAACTTCAACCGTGGACCGCGCAAGGAAAGCTTTCAAAGCA
GCAGATATACTTCTTAATTTCGTTGGTAGTCAACAGAAAATAAAAGGAGG
TCACGTGGACGGGCTAATCGAGACATTACGTAAAGATATTGATGGTTTGT
ATGGGAAAGAGAGAACAAATTCGGATGACGAAttgaaaaagaagtcattg
cttGCCAGCAGATCCAATAATTTGTTTATTGATAAATCTAACGGTCCGAC
AAAATCAGCGTCCAATCAACGACAAGTGACTGGAACTAAGAAACGTGTGA
TTGGTTCAAACGAAAGCGAGGCTATTCAAAATGGTACCACAAGTAGTGAG
ACGGGTGAGAAACTTGTCAAGAAAAGTGAATCGGTTattgaacttgaaaa
agaaaaagaggacGAAGTGAAGATAAAATCGGATTTGAAAGTCGGAAAGA
AAGATGAAGAGATATCGAGTAATGCTGCAGAGCTATTACAGAATCAACTC
AAACAACAACAGACCTTAAAAACACTAAAAGAAGCCAAATTAGCTCGACG
TAAATACGAACTGGCTAGACATGAGTTGGCAGAGAAAGTTAAACAGTTGT
ATAAAATGGCCAACGATTATGAGAAGGAAGAAACAGCCAACCAAGTGTTA
GAAGTGAAAAATGATCATATTCCAAAAGCTCAAAATATTGAACGAAAAAC
AGATGATATTACGCATGCGCCAAATACGAAGCGAGATGACGCGCATCCGG
GACTGGCCCTTTCCGGCGTCACTAACCGTGCGGTCAAGAGGATCTCAACA
TCTACTGAGTCAGATAATGGGGAACATAAAGGCTTTACTATGGGAGCTAT
CGATAAGAAGCAACATCTGATTGATTTAGATAAAGCTGTTGAGAAACCTT
CCAGTTCTGTCGAAGCTAAAGCATTTAAAGCTGTTCCTACTAAACGAAAA
TCTACTGACGATAGTCTACCAACAAACTTGAAGCTTGATGAGCTTAAAGA
TGAAGTAGGGAAGACCATGAAAAGTCAAGAGGAATCTTTAAAAGTCATTG
CACAGGCTATTAAAGAGGATATGAAGGATATTGCTGACGTtaacaaaaag
aagaagatggtAGCTGAAGCTATGGGTGgagcaaaaaaagataaacagtC
GACTGATAAATTGGATGAGTATCTGACCAAAGCATTGACAGATATCATGG
GAACAGATTCTGTCCCTGGGAACGAGGCAGGGAAGGAAGcggaagaaaaa
caaaaagagaaatcGGCCAACATGAAAAACACTAAAgaggaaaatatgaa
aatagtTGCTGAAGCAATGAAGTCTTCAAATAATGATTTACCCTTACCGT
TACTCTCCACTAAAGGCGATAAAATTGTtccaatgaaaaattcaaattcc
gAAACGGGGAAATCTTCACAACGGGATACAAATGATGTCCTACAGCACGT
TTCCGATCGGAATAAGGGAACCTTGGACATGGCCGATCCTGCAAATAAAG
CGCTTTTAGAAAAAGCGAGTCATTTAGAGGAGCAAGTAGCTGCACAGCAA
GATCAATTATACAATTCAAAAGGTGGAGATAATGGTCCGGCGCCGGCAAA
ACCGAACGTTGAGTTTACACCCAGTGAACCAAAATCGAATGCAGATACGG
TGAAAACGGAGGCGACGGCGGTTGCTGGCGGTGGTGGCGGGGAAAAGAAA
GACGCTTATGGTTCGATTAAAGAAACGATTGATAATCCAGCGGAGAAGGA
GCGAGCGACGAATGAAAATGACGAAGAGGAAGATAGAGACGATGATGACG
ACGACCGAGAAGATGACGATGATGACGAAAGAAATTACCATCATCCACGA
CATCACTATGACGATGACGAGGACGATCgtgatgatgatgaagaagacGA
CCGTTACGATAAACGACATCACGTGCGTCATCATCGGTCTCGTTTCCATG
ATGAGGTTGCTAAAAAACGATCATTCAACGATCGACCCAATGAAGCGCCA
AATAAACCAAAAGATGAACTAGAAGACGTGAAAGTGGAAAGACATTTTGA
TGATTTGGAAGATAATTGAatgtataaaatcttttgtttattGGgattgt
tcATCCTAGCCTTGCTCCCTCCCACACTTCACGCAGCGTCTTTAACGGAC
GAAAATGCCGTCAGCCGAAGTTACGTAACCAAGCATTCCCCATCATGGCG
TTATTTCAAACTCGCTAACGACGTCAACAAAcgtgaaaagttaaaaaaag
ctTTACGTGATGCTTTGAAATCCGTCGTAACGGATGAACGTAAAAGCGAA
GTTACGACACCGGACGTAGAACGTGGCTCCGTAAGCCGCATCACGCATGC
TGCCATGCTTTTAAAAGAATTCAAGGAGATTCACCAACTGTCAGAAACTG
TTAAACGCACGCTAACCGATTATAATTCAGCAAAAAGTAATTTATCACAG
ACAATAAATGATGACAGGATTGGTCTCTTGAAGCGATTCCTGGTTGGACG
CACCAAGAGAACATTTGTACCTCACGCCAACGATCCTCTTAAGGATGTGA
GTCCACCACAAGTTCGAGACATGGTGCTTGATAAACCACATTTTTTGAAA
CATACAGATAAAATATCGGTCATTGCCACACCTCTTGAGCAGAAAGGGAA
GGTTGGTTTAGAGTTTATTTCCGTTGACCCAAAAACTTCAACCGTGGACC
GCGCAAGGAAAGCTTTCAAAGCAGCAGATATACTTCTTAATTTCGTTGGT
AGTCAACAGAAAATAAAAGGAGGTCACGTGGACGGGCTAATCGAGACATT
ACGTAAAGATATTGATGGTTTGTATGGGAAAGAGAGAACAAATTCGGATG
ACGAAttgaaaaagaagtcattgcttGCCAGCAGATCCAATAATTTGTTT
ATTGATAAATCTAACGGTCCGACAAAATCAGCGTCCAATCAACGACAAGT
GACTGGAACTAAGAAACGTGTGATTGGTTCAAACGAAAGCGAGGCTATTC
AAAATGGTACCACAAGTAGTGAGACGGGTGAGAAACTTGTCAAGAAAAGT
GAATCGGTTattgaacttgaaaaagaaaaagaggacGAAGTGAAGATAAA
ATCGGATTTGAAAGTCGGAAAGAAAGATGAAGAGATATCGAGTAATGCTG
CAGAGCTATTACAGAATCAACTCAAACAACAACAGACCTTAAAAACACTA
AAAGAAGCCAAATTAGCTCGACGTAAATACGAACTGGCTAGACATGAGTT
GGCAGAGAAAGTTAAACAGTTGTATAAAATGGCCAACGATTATGAGAAGG
AAGAAACAGCCAACCAAGTGTTAGAAGTGAAAAATGATCATATTCCAAAA
GCTCAAAATATTGAACGAAAAACAGATGATATTACGCATGCGCCAAATAC
GAAGCGAGATGACGCGCATCCGGGACTGGCCCTTTCCGGCGTCACTAACC
GTGCGGTCAAGAGGATCTCAACATCTACTGAGTCAGATAATGGGGAACAT
AAAGGCTTTACTATGGGAGCTATCGATAAGAAGCAACATCTGATTGATTT
AGATAAAGCTGTTGAGAAACCTTCCAGTTCTGTCGAAGCTAAAGCATTTA
AAGCTGTTCCTACTAAACGAAAATCTACTGACGATAGTCTACCAACAAAC
TTGAAGCTTGATGAGCTTAAAGATGAAGTAGGGAAGACCATGAAAAGTCA
AGAGGAATCTTTAAAAGTCATTGCACAGGCTATTAAAGAGGATATGAAGG
ATATTGCTGACGTtaacaaaaagaagaagatggtAGCTGAAGCTATGGGT
GgagcaaaaaaagataaacagtCGACTGATAAATTGGATGAGTATCTGAC
CAAAGCATTGACAGATATCATGGGAACAGATTCTGTCCCTGGGAACGAGG
CAGGGAAGGAAGcggaagaaaaacaaaaagagaaatcGGCCAACATGAAA
AACACTAAAgaggaaaatatgaaaatagtTGCTGAAGCAATGAAGTCTTC
AAATAATGATTTACCCTTACCGTTACTCTCCACTAAAGGCGATAAAATTG
TtccaatgaaaaattcaaattccgAAACGGGGAAATCTTCACAACGGGAT
ACAAATGATGTCCTACAGCACGTTTCCGATCGGAATAAGGGAACCTTGGA
CATGGCCGATCCTGCAAATAAAGCGCTTTTAGAAAAAGCGAGTCATTTAG
AGGAGCAAGTAGCTGCACAGCAAGATCAATTATACAATTCAAAAGGTGGA
GATAATGGTCCGGCGCCGGCAAAACCGAACGTTGAGTTTACACCCAGTGA
ACCAAAATCGAATGCAGATACGGTGAAAACGGAGGCGACGGCGGTTGCTG
GCGGTGGTGGCGGGGAAAAGAAAGACGCTTATGGTTCGATTAAAGAAACG
ATTGATAATCCAGCGGAGAAGGAGCGAGCGACGAATGAAAATGACGAAGA
GGAAGATAGAGACGATGATGACGACGACCGAGAAGATGACGATGATGACG
AAAGAAATTACCATCATCCACGACATCACTATGACGATGACGAGGACGAT
CgtgatgatgatgaagaagacGACCGTTACGATAAACGACATCACGTGCG
TCATCATCGGTCTCGTTTCCATGATGAGGTTGCTAAAAAACGATCATTCA
ACGATCGACCCAATGAAGCGCCAAATAAACCAAAAGATGAACTAGAAGAC
GTGAAAGTGGAAAGACATTTTGATGATTTGGAAGATAATTGA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_001817XLOC_001817Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00003264-exon-sc0000026-1491911889:227826..227941TCONS_00003264-exon-sc0000026-1491911889:227826..227941Clytia hemisphaericaexon
TCONS_00003264-exon-sc0000026-1510915933:227826..227941TCONS_00003264-exon-sc0000026-1510915933:227826..227941Clytia hemisphaericaexon
TCONS_00003264-exon-sc0000026-1575043694:227826..227941TCONS_00003264-exon-sc0000026-1575043694:227826..227941Clytia hemisphaericaexon
TCONS_00003264-exon-sc0000026-1491911889:228332..230704TCONS_00003264-exon-sc0000026-1491911889:228332..230704Clytia hemisphaericaexon
TCONS_00003264-exon-sc0000026-1510915933:228332..230704TCONS_00003264-exon-sc0000026-1510915933:228332..230704Clytia hemisphaericaexon
TCONS_00003264-exon-sc0000026-1575043694:228332..230704TCONS_00003264-exon-sc0000026-1575043694:228332..230704Clytia hemisphaericaexon
TCONS_00003264-exon-sc0000026-1491911889:231712..231788TCONS_00003264-exon-sc0000026-1491911889:231712..231788Clytia hemisphaericaexon
TCONS_00003264-exon-sc0000026-1510915933:231712..231788TCONS_00003264-exon-sc0000026-1510915933:231712..231788Clytia hemisphaericaexon
TCONS_00003264-exon-sc0000026-1575043694:231712..231788TCONS_00003264-exon-sc0000026-1575043694:231712..231788Clytia hemisphaericaexon
TCONS_00003264-exon-sc0000026-1491911889:232217..232899TCONS_00003264-exon-sc0000026-1491911889:232217..232899Clytia hemisphaericaexon
TCONS_00003264-exon-sc0000026-1510915933:232217..232899TCONS_00003264-exon-sc0000026-1510915933:232217..232899Clytia hemisphaericaexon
TCONS_00003264-exon-sc0000026-1575043694:232217..232899TCONS_00003264-exon-sc0000026-1575043694:232217..232899Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00003264-proteinTCONS_00003264-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000026supercontigsc0000026:227826..232899 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.293126 0.438433 0.397035 0 1.21468 1.42731 21.9557 23.9395 2.249 4.32432 10.4752 6.83102 12.6934 10.8183 7.67902 23.6178 10.8944 10.9993 0 0 8.4511 7.33995 3.80804 5.24639 10.9116 12.7712 3.56557 5.40342 0 0.488649
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00003264 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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