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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00003250 ID=TCONS_00003250|Name=TCONS_00003250|organism=Clytia hemisphaerica|type=transcript|length=1431bp
GTACAGGTCAAAGAAAGGAATATCTTGTTAGTCATTTCTCTTGAAAAAGG
AAAGCTAGCGTTAAAGATGTGTAGAGACGCTAAAAACCTAAAACTAAGTA
TAGTGGAGAAAGCTGCGTGATAGCAAGACTCAGCCTGAGATTGATTGAAT
TTGACATGTCCTAAATGTTTAATATATTAGACAAGAAGGCTCAACATCAA
TCCCTACTTCTGATAAATGATTCTTTTTTTCTGACTGGTTGATATTTCCC
ACTCTTTGTTTttttagaggtatcatatgtcaTTTTCAAAGGTTACTTAG
AGGACTTTAAGGAGATTATGCTTGACTGACAAATACTTTACCACTTTGTG
ATAAATACCGAAATTGTTCACAGGAATTTTTTTGACCCGCATCCGGCGCA
AAGAgtgatcttataaaaaataaaatcatcatCAATATTATAGGAGTTAT
ATTCAAAAGAATAAGCATTGATTTTCGTTTTAAATTTggatagttttttt
ttaaaagacttATGACATTCAATTTCAGTTAGTTGGCATTTTATTCCAGA
TTTTCACAGCCTGGTGTGAAAAGGATTTCAGTCCTGTTTCGCACACAACA
GAAAGTTGTTGTTTTCTAGAGGTTAATTGATCATTTTCACAAGCGAACAT
TGATCCGAAGCCCTCATCAATCTATTGATGGTAAACTCTGTGCATCATAC
ACAGTATTCTCCTTAATACCTTCATTTCTTGTTCTAcaccataaattttt
tttgttaagtttttgaaattttgatgatcACCAACTTTTTCGAAttacct
ttttctttttcttttttagaatttttaaactaataaactatttattcaat
atatttttttactattttactatttattcttcttcctttttatatttttt
tatttttataaacaagtttttgttaaatatttgcgaTGTTAGCAgatgtt
agcttttttaggcttatgcaaataaatggatagaaatagaaatagaaatc
gaCGTTTGTATATGTATGAGATCGGCATCCAACTTGCTTTTTTCAATGTT
TCGAAGCTGGACAGGTTTTACCAAACGGTGTATCACCGTTTAGCAGCTTT
AACATGGATTTCCTCCAGAGATTTTACAGCCGTGCAAGGCACTAAGAGGC
CACGTGGGTGCCAAatttcattggtggaaatttgataaaaagcAGTGAAG
GAGCTCCGGGAAGTAATCAGTAGAaaagaccactttcgtttttgatgcag
atttcgatataaactttTCTCACAGGCATTACTTGTCAATGCGTTGTGTC
AACTTACTTGTCAGCAATGTATTGTTGTAaaaggaaagataaaagaggta
agactagcctagttcctaatcctgatataggagtttaagcttagactgaC
CGTAAGTtagtctaatatcgacatccctctt Run BLAST on NCBI transcript from alignment at sc0000025:959078..960508 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00003250 ID=TCONS_00003250|Name=TCONS_00003250|organism=Clytia hemisphaerica|type=transcript|length=1431bp|location=Sequence derived from alignment at sc0000025:959078..960508 (Clytia hemisphaerica)
aagagggatgtcgatattagactaACTTACGGtcagtctaagcttaaact
cctatatcaggattaggaactaggctagtcttacctcttttatctttcct
ttTACAACAATACATTGCTGACAAGTAAGTTGACACAACGCATTGACAAG
TAATGCCTGTGAGAaaagtttatatcgaaatctgcatcaaaaacgaaagt
ggtctttTCTACTGATTACTTCCCGGAGCTCCTTCACTgctttttatcaa
atttccaccaatgaaatTTGGCACCCACGTGGCCTCTTAGTGCCTTGCAC
GGCTGTAAAATCTCTGGAGGAAATCCATGTTAAAGCTGCTAAACGGTGAT
ACACCGTTTGGTAAAACCTGTCCAGCTTCGAAACATTGAAAAAAGCAAGT
TGGATGCCGATCTCATACATATACAAACGtcgatttctatttctatttct
atccatttatttgcataagcctaaaaaagctaacatcTGCTAACAtcgca
aatatttaacaaaaacttgtttataaaaataaaaaaatataaaaaggaag
aagaataaatagtaaaatagtaaaaaaatatattgaataaatagtttatt
agtttaaaaattctaaaaaagaaaaagaaaaaggtaaTTCGAAAAAGTTG
GTgatcatcaaaatttcaaaaacttaacaaaaaaaatttatggtgTAGAA
CAAGAAATGAAGGTATTAAGGAGAATACTGTGTATGATGCACAGAGTTTA
CCATCAATAGATTGATGAGGGCTTCGGATCAATGTTCGCTTGTGAAAATG
ATCAATTAACCTCTAGAAAACAACAACTTTCTGTTGTGTGCGAAACAGGA
CTGAAATCCTTTTCACACCAGGCTGTGAAAATCTGGAATAAAATGCCAAC
TAACTGAAATTGAATGTCATaagtcttttaaaaaaaaactatccAAATTT
AAAACGAAAATCAATGCTTATTCTTTTGAATATAACTCCTATAATATTGa
tgatgattttattttttataagatcacTCTTTGCGCCGGATGCGGGTCAA
AAAAATTCCTGTGAACAATTTCGGTATTTATCACAAAGTGGTAAAGTATT
TGTCAGTCAAGCATAATCTCCTTAAAGTCCTCTAAGTAACCTTTGAAAAt
gacatatgatacctctaaaaAAACAAAGAGTGGGAAATATCAACCAGTCA
GAAAAAAAGAATCATTTATCAGAAGTAGGGATTGATGTTGAGCCTTCTTG
TCTAATATATTAAACATTTAGGACATGTCAAATTCAATCAATCTCAGGCT
GAGTCTTGCTATCACGCAGCTTTCTCCACTATACTTAGTTTTAGGTTTTT
AGCGTCTCTACACATCTTTAACGCTAGCTTTCCTTTTTCAAGAGAAATGA
CTAACAAGATATTCCTTTCTTTGACCTGTAC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00003250-exon-sc0000025-1491911889:959078..960508 | TCONS_00003250-exon-sc0000025-1491911889:959078..960508 | Clytia hemisphaerica | exon |
| TCONS_00003250-exon-sc0000025-1510915933:959078..960508 | TCONS_00003250-exon-sc0000025-1510915933:959078..960508 | Clytia hemisphaerica | exon |
| TCONS_00003250-exon-sc0000025-1575043694:959078..960508 | TCONS_00003250-exon-sc0000025-1575043694:959078..960508 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000025 | supercontig | sc0000025:959078..960508 . |
Blast
The following BLAST results are available for this feature:
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