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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00003246 ID=TCONS_00003246|Name=TCONS_00003246|organism=Clytia hemisphaerica|type=transcript|length=1088bp
tctaaTATGAAGCAgctcttaacattttcttttcttctgtTCTTAAAAAT
TGGGGTATAAGATCCCAAAAAAGACTTGtatataaaaattataattaatc
TATATTAACAGATAATCAATTTTATGAATTGTCTattaaaaaatactttc
aatttattaatttttattttttttagaattttgattACTCTTAAGTTTTT
TTCTGTTGCTGCCTCTTTATCTAAAGACTCTCCGAAACATGACACATtgg
aaaatgttgaaatatgtTTTGTCAACAAAAGGACACTTGTTGATTTATAT
ACATTTTCTCATAAACGAATTTCTTGAAAAGTAGGTGAAGCTTAATATAA
ATACATGCATATACATTCGAAAACACAATAGCCATGCCTCTTAATCGAGT
TGTTGttagtatttttttgaaaagaatatgtcagtattattttttgttaa
tgTTTTTATTCTTTAGATGCGATATATCCTTTACAATACCAAAGGTTTGT
TTAGTGTAGAATATGTACCTAAGTAGCCTAGAACTCTTCATATTAAAACA
GTTTGCTGTGCTGTGATAACTAAAAAAGTTCCTCCTATTTTATGGCCCTC
TTTTCTCTGATGTACCAAATGTTCGAGCAAGAACTTGGTTCGACTGACTC
AAAGACGCCCaatgaatttttcaatttctaactGTAAAGTTTCGAGAAAA
AGGAATTCATTTAATAGCAAAATGCATTTCTATGTGTACGTATTTTCCTA
AGGATATGTCTACATTAGTGTTTTGCACGATAAAGCTTTGTTTACATTGG
ACCTGATCAGGGTTGATCTGAACGAATCCACACAGTCTAAATTATTATTG
CTTGGAAATTATCAGCATGTAGTTATACCCTTATACACTTAATGTAGCAC
TCGCACAGAATTGAGTGTAAATAATGCTTTATTGacaatagaaaattttc
cacacggtatgacttttttatattaaagaaaaaaatcaatgtctTTTATT
AAAGATTATATCATTAGCCTTTTCCAGGCATTTCTCCTTTCATTATTTCA
AATCAAGGCATCACCTCTTAACAtaccttttctttttt Run BLAST on NCBI transcript from alignment at sc0000025:886393..887480 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00003246 ID=TCONS_00003246|Name=TCONS_00003246|organism=Clytia hemisphaerica|type=transcript|length=1088bp|location=Sequence derived from alignment at sc0000025:886393..887480 (Clytia hemisphaerica)
aaaaaagaaaaggtaTGTTAAGAGGTGATGCCTTGATTTGAAATAATGAA
AGGAGAAATGCCTGGAAAAGGCTAATGATATAATCTTTAATAAAagacat
tgatttttttctttaatataaaaaagtcataccgtgtggaaaattttcta
ttgtCAATAAAGCATTATTTACACTCAATTCTGTGCGAGTGCTACATTAA
GTGTATAAGGGTATAACTACATGCTGATAATTTCCAAGCAATAATAATTT
AGACTGTGTGGATTCGTTCAGATCAACCCTGATCAGGTCCAATGTAAACA
AAGCTTTATCGTGCAAAACACTAATGTAGACATATCCTTAGGAAAATACG
TACACATAGAAATGCATTTTGCTATTAAATGAATTCCTTTTTCTCGAAAC
TTTACagttagaaattgaaaaattcattGGGCGTCTTTGAGTCAGTCGAA
CCAAGTTCTTGCTCGAACATTTGGTACATCAGAGAAAAGAGGGCCATAAA
ATAGGAGGAACTTTTTTAGTTATCACAGCACAGCAAACTGTTTTAATATG
AAGAGTTCTAGGCTACTTAGGTACATATTCTACACTAAACAAACCTTTGG
TATTGTAAAGGATATATCGCATCTAAAGAATAAAAAcattaacaaaaaat
aatactgacatattcttttcaaaaaaatactaaCAACAACTCGATTAAGA
GGCATGGCTATTGTGTTTTCGAATGTATATGCATGTATTTATATTAAGCT
TCACCTACTTTTCAAGAAATTCGTTTATGAGAAAATGTATATAAATCAAC
AAGTGTCCTTTTGTTGACAAAacatatttcaacattttccaATGTGTCAT
GTTTCGGAGAGTCTTTAGATAAAGAGGCAGCAACAGAAAAAAACTTAAGA
GTaatcaaaattctaaaaaaaataaaaattaataaattgaaagtattttt
taatAGACAATTCATAAAATTGATTATCTGTTAATATAgattaattataa
tttttatataCAAGTCTTTTTTGGGATCTTATACCCCAATTTTTAAGAac
agaagaaaagaaaatgttaagagcTGCTTCATAttaga
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00003246-exon-sc0000025-1491911889:886393..887480 | TCONS_00003246-exon-sc0000025-1491911889:886393..887480 | Clytia hemisphaerica | exon |
| TCONS_00003246-exon-sc0000025-1510915933:886393..887480 | TCONS_00003246-exon-sc0000025-1510915933:886393..887480 | Clytia hemisphaerica | exon |
| TCONS_00003246-exon-sc0000025-1575043694:886393..887480 | TCONS_00003246-exon-sc0000025-1575043694:886393..887480 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000025 | supercontig | sc0000025:886393..887480 . |
Blast
The following BLAST results are available for this feature:
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