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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00003231 ID=TCONS_00003231|Name=TCONS_00003231|organism=Clytia hemisphaerica|type=transcript|length=883bp
CCTGGCTCTTTTCGTCGCCGCTCGGCTATTGTGGGGTCCGCACTTAGGCC
TTTGGAGGCAAGACCGCTTTCTAACATCGGATAGGCCCCGATGGCAAGAT
CGGTCTCTCCTCCATAGAGCATAGCGGATATCCCGTTCTTCTTAAATTTC
AGTGCCCTATATCATTTCGTATATTACTGttgcttttatttttaatcaaa
aacgaaagtgtaAATTTTGTTATATAGCCTAAAGTAGAGGATATTGTTTA
GTTATATATACTGATATATACCANCTGTCAGCATTTTTCTTAGAAATATT
CTTAAACAataaatttgggaaaacacaCGTAAATGTCGAAAGATCGTTGA
CAAAAATGTGCTATGTTTAAACAATAAACAATAATATTACTTCCTAGTGG
GCACAAGACGTCAAAATGACGTCTATCAAACGTCCAAAAGAAACCATGAT
ACAGTCCCCATAACTCGAAACTCTGTTTCTCAGATACCTTAATTCGAACA
AGATTTCTGTTATGTACTGTAAACAAACCCTCAGAAAAAAAGTCCCTAGA
ACTCAAATGTTCCATATTTCGAACAAATCTTCGCTGAAGATTTCGATAGA
CAAAATCTTCCTGGTTTGAACACAAGAATATATCACGATCTAGAACTTCA
ACTATTCaagataattttgaaaaccTCTGATTTTAACCCGACTGGATTGC
ATCCGGAATACAACATTGTTACAAATACGACATTATTGGAAAAGTCATTA
GTATGTTCGCCAGATTTTATGTgtttttgcaaagtaaaaaaagattgaaa
caagttctttatttgaaaataaaggaTACAAAACTggaattttaacattt
tctttcaaaatagcGACCTTGttaaatgctcct Run BLAST on NCBI transcript from alignment at sc0000025:590053..590935 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00003231 ID=TCONS_00003231|Name=TCONS_00003231|organism=Clytia hemisphaerica|type=transcript|length=883bp|location=Sequence derived from alignment at sc0000025:590053..590935 (Clytia hemisphaerica)
aggagcatttaaCAAGGTCgctattttgaaagaaaatgttaaaattccAG
TTTTGTAtcctttattttcaaataaagaacttgtttcaatctttttttac
tttgcaaaaacACATAAAATCTGGCGAACATACTAATGACTTTTCCAATA
ATGTCGTATTTGTAACAATGTTGTATTCCGGATGCAATCCAGTCGGGTTA
AAATCAGAggttttcaaaattatcttGAATAGTTGAAGTTCTAGATCGTG
ATATATTCTTGTGTTCAAACCAGGAAGATTTTGTCTATCGAAATCTTCAG
CGAAGATTTGTTCGAAATATGGAACATTTGAGTTCTAGGGACTTTTTTTC
TGAGGGTTTGTTTACAGTACATAACAGAAATCTTGTTCGAATTAAGGTAT
CTGAGAAACAGAGTTTCGAGTTATGGGGACTGTATCATGGTTTCTTTTGG
ACGTTTGATAGACGTCATTTTGACGTCTTGTGCCCACTAGGAAGTAATAT
TATTGTTTATTGTTTAAACATAGCACATTTTTGTCAACGATCTTTCGACA
TTTACGtgtgttttcccaaatttatTGTTTAAGAATATTTCTAAGAAAAA
TGCTGACAGNTGGTATATATCAGTATATATAACTAAACAATATCCTCTAC
TTTAGGCTATATAACAAAATTtacactttcgtttttgattaaaaataaaa
gcaaCAGTAATATACGAAATGATATAGGGCACTGAAATTTAAGAAGAACG
GGATATCCGCTATGCTCTATGGAGGAGAGACCGATCTTGCCATCGGGGCC
TATCCGATGTTAGAAAGCGGTCTTGCCTCCAAAGGCCTAAGTGCGGACCC
CACAATAGCCGAGCGGCGACGAAAAGAGCCAGG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00003231-exon-sc0000025-1491911889:590053..590935 | TCONS_00003231-exon-sc0000025-1491911889:590053..590935 | Clytia hemisphaerica | exon |
| TCONS_00003231-exon-sc0000025-1510915933:590053..590935 | TCONS_00003231-exon-sc0000025-1510915933:590053..590935 | Clytia hemisphaerica | exon |
| TCONS_00003231-exon-sc0000025-1575043694:590053..590935 | TCONS_00003231-exon-sc0000025-1575043694:590053..590935 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000025 | supercontig | sc0000025:590053..590935 . |
Blast
The following BLAST results are available for this feature:
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