TCONS_00003193 (transcript) - C. hemisphaerica

Overview
NameTCONS_00003193
Unique NameTCONS_00003193
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2583

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00003193 ID=TCONS_00003193|Name=TCONS_00003193|organism=Clytia hemisphaerica|type=transcript|length=2583bp
taTCATTTTACACTTTTATTCGAACAACTGCTATAATAGTTAAGCGCTTG
TGGTGGACCTAACAACCTCTTTTTATtgggttttttggatttgattgTGG
TTTCCAGTCTTCTCGTGGATTGAGTTTTACTGTTGGAGTCTAAAGataat
attttgatgtttttctatTGATTTTAGCAGAAATTTTCATACTTGCAATA
TTAGAATATTAAATATCAAGTTGGATAAATTCTGGACGGGAAAAATGTTT
CGGAGCAAAGAACTAGTTGTGGTTTTAATTTCATTATTGACTATTACTTA
TGGTCAAGACGATATTTCGACGACGGTTTCAACTTCAGCAACAGAGATCA
CCAGTACAGTACAAACAGAATCTACTGAACAACCAGCATCAACTTCCACA
TCAAAACCAGTGGTAACTGAATCAACAGTCACCTATACGACAGATAGTGA
TGACACTACAACGCCTCAAACGGGGCCAACCATGGCGACAGAAACAACCG
AACAGCCACAAACGCAAGCAACTAAACAACCTTCAACCACTGGGAATCCA
AAGACAACACAATCTCAAGAAGATGAAACGACCACTCTGGCTCCAAGCGA
ATCTAACGTCTCTACCAAAGCTGAAATCACTTCTACGAAAGCTGAAATGA
CCTCTACCGAAACAATGACTGAGAAAACCTCAGAATCAAAAAATGTTGCA
CCAGAAGAGAAAGTGTCTTCGACCACAACGCCAGTAAAACCCACTACTAC
ACAATCAACACAATCACCAACAAAGGTAACATCAAAAACCAAAACTACAG
CCTCGGAGAAAGTGACCACAATGGCTCCACCAGCTACTCAGTCACCGGTA
AAACAAACTACCAAACCATCTGAACAaccaaaaccaacaacaatGTCTCC
AAAAACAGAATCCAAAGACGATAAAATGTCTTCAGTCACTTCGGGAGaca
accaaaaaaatcaaacaacaacaaaagggACAGTTGAAAATATGGCAACC
TCTACTAAAGCGACATCGTCAGAAACAACACCTAAAGTAGGAGAAAGTAC
AACAAAAGCAGCACCTGAAACAACCCAGAAGATCACTACAACAACAAAGA
TGTTTCCGCTAAAACCACAAGCCGCTGATTCACAAGCCACAAGACAATCT
AACTCTACAGATGCTGTGACAACAGAAGAAACAGTTAAGACGACAACAGT
CTCGAAACCTGTCGTGATAACATCAATGCCGGCAACCACGAAAAACATGA
CTACGTCTGAAGCTATggctacaacaacaacaacaacaacaacaacgacg
cAGCCACCTGCTGTGATATTAGCAGATACAACCACAACAACTACTAGCAC
TCCAACGACCACAACCACAACCAGCCAATCCCCAACTACAAGTACAACAA
CCACTCAATCTCCTGTCATAACGAAGAGCACAACCTCTgttccaacaaca
acaacagcaacaacaacaacaacaacaacaacaacaacaacaaaatcagT
CCCTGAAACCACTACAAAGATGATAAGCCATACAACAACAACACCTTTGC
AAACCACTCTTCCCGTAACTACAACAGAAGGAAAGACGGAACGATCTGGG
CCTTCAACTAGGATTAAAACAGAAACAAATGTACCAACACTTATTCCAAC
CGGTGCTGCATCTACCAAAGACAAAGGACAAGCAGTCGACATTGCCGTCA
TCGTGACGGTCATAGCTGCTCTACTTGTCGTTTTGCTTGTTGTCGGTTTC
TTTGTGTACCGACGACGTCTCGCAAGTAACCGTCGCGAAAGTGTAGTGAG
TAAAAGTTTGGTAGAAAATTCTGATAAAGACATTGAAATGAAAGGTGACG
GAAATGCTacaaaaaatggaaagaaaGATTCGACAAGTGACGGAGAACAT
TTAATCGATTAAACCTGCCGATTATATATAGTTATACGATTATTTTTAAT
GATTAAATTTGCGTACTAGTCTAGTAAATACGagtcaaaaacgttaaaaa
aaaaaatagaaaacgcGTTTTCTTAAtagctacatacactacacaatatt
gCTGAATGCCGGCAATTAATTGAagaggtgtccgcaatatattgccagct
tgatttgcaattttccaacaatatagggagattgtttacagaaaattcct
ttttatgaTAGAGCAACTGTTGTTTACTCCGTACGTACGTACGTACGGTC
CGAAAACTATATTGGCGACTATTGctcaccaatatattgtgtagtctaag
tagggCTAATCCTAAAgtctattccaaaaaaatggTAGTCCGCAAATTTT
TATACATTGCTCTTGAAGGAgaaattttttgccaattttctaagaacaga
ttttagattaaatttcgcgattaagTTTTAAAGGTGATTTTTGCACACAG
TACTATTTAGGAATTAATTATTATATCAGAAGGAAATGTATATTATAATA
AATCTCTCTTTGTAAATGTGAAATTATGTCATTTTTCAGTAGGTTTTCTA
AAATATCAACTTAATTAGAAGTTGTAGAAGAATTTATATACATAGTCGAT
TATATGTAAGAAAGATATTAATACAAACCAGTG
Run BLAST on NCBI

protein sequence of TCONS_00003193-protein

>TCONS_00003193-protein ID=TCONS_00003193-protein|Name=TCONS_00003193-protein|organism=Clytia hemisphaerica|type=polypeptide|length=555bp
MFRSKELVVVLISLLTITYGQDDISTTVSTSATEITSTVQTESTEQPAST
STSKPVVTESTVTYTTDSDDTTTPQTGPTMATETTEQPQTQATKQPSTTG
NPKTTQSQEDETTTLAPSESNVSTKAEITSTKAEMTSTETMTEKTSESKN
VAPEEKVSSTTTPVKPTTTQSTQSPTKVTSKTKTTASEKVTTMAPPATQS
PVKQTTKPSEQPKPTTMSPKTESKDDKMSSVTSGDNQKNQTTTKGTVENM
ATSTKATSSETTPKVGESTTKAAPETTQKITTTTKMFPLKPQAADSQATR
QSNSTDAVTTEETVKTTTVSKPVVITSMPATTKNMTTSEAMATTTTTTTT
TTQPPAVILADTTTTTTSTPTTTTTTSQSPTTSTTTTQSPVITKSTTSVP
TTTTATTTTTTTTTTTKSVPETTTKMISHTTTTPLQTTLPVTTTEGKTER
SGPSTRIKTETNVPTLIPTGAASTKDKGQAVDIAVIVTVIAALLVVLLVV
GFFVYRRRLASNRRESVVSKSLVENSDKDIEMKGDGNATKNGKKDSTSDG
EHLID
Run BLAST on NCBI

transcript from alignment at sc0000025:555075..563593-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00003193 ID=TCONS_00003193|Name=TCONS_00003193|organism=Clytia hemisphaerica|type=transcript|length=8519bp|location=Sequence derived from alignment at sc0000025:555075..563593- (Clytia hemisphaerica)
TATCATTTTACACTTTTATTCGAACAACTGCTATAATAGTTAAGCGCTTG
TGGTGGACCTAACAACCTCTTTTTATTGGGTTTTTTGGATTTGATTGTGG
TTTCCAGTCTTCTCGTGGATTGAGTTTTACTGTTGGAGTCTAAAGATAAT
ATTTTGATGTTTTTCTATTGATTTTAGCAGAAATTTTCATACTTGCAATA
TTAGAATATTAAATATCAAGTTGGATAAATTCTGGACGGGAAAAATGTTT
CGGAGCAAAGAACTAGTTGTGGTTTTAATTTCATTATTGACTATTACTTA
TGGTAAGTTTAATTAAGAATCAGTCAATTACTTAATTTCCTTTGATGCAT
TTACTTAAAATTTTTTGCGGTAGATTTTTATTTTGCATTTGAGTAAGAAT
AATGTTTAGGAGAAGCATGTTTTACAAGATGTTGCTTCGTCCAAAAATCT
ACTTTAATTGTGTCTAAACTGAAAGGTGGCACTTTAAAAAAAAATTGAAG
CACAAAATGTTATTCAAACGCCCATCTCACGTTCTAAATACAAGTAGTCT
CTTTAACTTGAACCTCTATAACTCGAATGTCTCCTCAACTCAAACAAGGT
TTGTTTCTAGTCCCTTCAGTTAACAAACGTTACTCCATAACTCGAAATTC
CTTTAACTCGAACAAATTTTTGTTTCTCGTGCGGGTTCGATTTATGGAGA
CTCCTCTGCAGCTCTAAACTCGCCTGGAAAACACTATCGTAGCATCGGTA
AAATGTCCGTTATTCAAAACGCTTTAAAATTTTGAAATTATCACTTCAAG
GCTAGCCCTTAAAGTAGACGACATTGTAATTTTGGTGAGACAACCGCTAG
TTAGTCATTTTTAACAGAATTTTAAGTTAACGCCTGCTTCAGAGATTCAT
TTACAAATGAATTTACGCGTCTGTGTAAATCCTAAAGTCAGTCAAGATGT
ATTGTTGTGAAATATTTTTAGACTGTTGCAGACGTTAAATCAATATTTGA
AGAAAATGTCATATCGCATGGATTGTTCACTCCTTTCAATTATGGAAAAA
ATTAAAATTGTCTACATTTCGTTTGACTGATAAGATCGAAAATTAATCAA
TTCCAAATTGTAAAGTTAAGAATTGAAAAGAAATTCCACTCCAAGAGTCA
TCCGTGAGAAATAATTGAAAACTAGATATTCAGCACGACTTGAAATGCCA
AACTATTGTACCTCCGACCCTTAGAGAGACAAATCGATTAAAAAGTGACT
CTTAAATATTTTTTGAGTTTAAATGCTTTTCGTGCTTCTTAAAGAGACCC
AAAAGGGGGGAATTCCAACCCTTAGAGAGACTTTTTTGACTTTTTGTTGT
TTTTATAACCCTTAGAGAGACTTGGGAATTTTCTAAGTAATCCCAACCCG
GGGTTTGTGCAAGGGTACTGTTTCATTGAACCGAAAAAGTTTTAGGCAAT
TGCTTAGAGGAGCTAAATTGAAGTTTCCGATCGGTTGGAAATCAATATAA
TGATATCGATTAGTATAAGGCAAAGCAAAAATTGAATTGTTTTTCATGTC
AAATCATGGTTTTTCTTGTATCATAACCCTTAAAAATATATCTTAAAAGA
GGGTTGTTAAGCTCTTGAATTGTTGACAATGTAAAGAATCTTTTGGGTCG
AAAGGATTTTTTTCTCAAATTAAGAGTAGGCACACCTATTAGTAAAAACA
CCCCCTTCTCAAAGACCCGGTAGGATTTTTTCAGCCAGTGGGGATAAAAA
TAACGTACTGAAATTCGATGGGGATTGATATTCCCTTATTTTTTATGACT
AAGGATTTCAATTCTTTTGTTTTCAAGTCAGAAAATTCAGTGAGGAATCC
TAAAACTCAGATTGGTCTAAATGGCCAACAAATCCAATCTCATGTTAAAA
TATCTGTGCCAGCTCTTAACGCAGATTAAGACTTAGGGAAGAATAAGTCT
TGTGGAAAAACATATGTAGCACAATATATGTATTTCTTAAGGGCGCATTT
CAAAAAAAAATCTTATGCTATGGTTGACGTGTGATATAAAAGTTAAGAAA
TAATTCGACTTTCTTTATCGATCGAAAGTTATTTTTATAAACTGCTGGAT
TAAGTAGTGATACATCACTTTTAAGTAAAGACTAAACTCAAAATTCTTTA
TGGTGGATTATAGTGACCCACATATAGATACATCAATCTCTAGAACAGTT
TTTATTTTTGATTTCATTCTTATGATAAGGTGAAGTTTCGATTAATCTAT
TGTTTTTAAAAGTAGTACAGTCGAACTGGATTTCTCCCTGTTTTACACCC
ATACACGTTTTTATATGAACAAAATATATAAGAACATAAGGCTTCGATGG
CCAAAATATTAAACGTTTTATTTTTACATAAGTGTTCCCGTTTCATATCA
GACACGTGTTTTATACAGCACCTGACCCCGAGAATGTAGGTGAAATTTGA
ATCAGACCTGAAAGATGTAGATTTGCATTTTAGAAAACATTGAATGTTTT
CAAGGAAATTTTGAACTCCCAAAATCCTTTCCCAGGGGTTAGTTTTATTA
CTTTTGATAGATAGGCTAATTGTTTTTGTCCTTGAAGTTGACTCCCATTT
TCGTTAACCCCCAGAATGTAGGTTTGGTTTTATGGCTTTAAATCTAGTAA
TAGTAAAATGTTGATATTTTTTCAATTGGATTAATTATAACAGCAAATTT
TAGAAATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
AGGGGATTTTGTTCGACAGAACTTAAGAAAAGCTAAAAAAAACAACTTAT
ATATATAACTTATATATACTTAAAGTATATGCAGTAGAAAATCTCAATTC
TAAAAGCATTCTCAATTTGCCCGAGCTCTACGCTTTTGTTTTGATTTGTC
ATTTCCGACCAGTTCCCTTAACATTTACCTTGATCCGTTTCAAACCAAAA
CTTTGGTGAAATTCAGACAAAAGGAGATGAGCATTTTACCTTAGCAAAGA
ATGACAGTTTAAAACTATTGTCAAGTTAAGTAATAATATGTATATGCATA
ATATTTTAGGAATTTTAAAACTAGCTATATCGCGCAAAACTGAAATTACT
ATGCACATTTCAAGAAAATTTTTGAAAATCTCATATGTGTATCAAGGCAC
AATTAGGGTGATTTCTCGAATTCATACATGAATACTAGTGAATCGAAAAA
AATGCGTGAATAGAAAATTGCGCGAACGTTAATTGAAAGTCAAAGAGCGA
ATCTCGAAAAGCGGCCGAAAAGTTAATGCATATCTGTCCGAGTTTTGCAT
ATTTTCCCAAAGATGATCGTGCGTTGATTTCGAAAAACATTTTTGGTCCT
CTGTGAGGTTCATCAACTGAGCCCAGGTATGAGTGGTATCAAGAGCCACT
AAGAGTAAACACTCTCTGGCGTACGCAAGGCACGTATCATCTCCACCAAA
GTCACTGATCACGAAGTTAATATATGCGCGAATAAGTTTACTTTACCATT
ACCGTGAGCATCATAGTTTAGCTTTCTCTCTGATTGAAACTTAACATTTT
AGGATAGACTATAAATATCTTATCGCGCATGTCTCAAGCACATTATTATT
GAAATAATCGAAGGTGGAGTGCCCACATCGTTATATCATGTATCTAGTTT
TTACAATTCTTCTGGGATTCTGAGAATATCAGTGAAATGAGTGTTGTTTT
AAGATGACTTTCCTTCATTAACTATTTTCTACGTTTTTTACTTGTGATTT
GATTTGTACCTGAATGGTTGTCATGGTTACTTATGCATTCACTGAATGCG
CACTGAATAGAATCGCAATCGGTCTTCACAGTGTATATTCACACAATACT
TTTGCAATAGAATCTGTCCCTTTCAAACAGAAATCAAAGAACTGAGTACT
CTTCAGCACAAAACATATTACCGTCTATCCGAGATAGAGTTTTATTACAG
AAAGTCTAAATTTTCTATTTTTTAAATACTTTTTGCAGGTCAAGACGATA
TTTCGACGACGGTTTCAACTTCAGCAACAGAGATCACCAGTACAGTACAA
ACAGAATCTACTGAACAACCAGCATCAACTTCCACATCAAAACCAGTGGT
AACTGAATCAACAGTCACCTATACGACAGATAGTGATGACACTACAACGC
CTCAAACGGGGCCAACCATGGCGACAGAAACAACCGAACAGCCACAAACG
CAAGCAACTAAACAACCTTCAACCACTGGGAATCCAAAGACAACACAATC
TCAAGAAGATGAAACGACCACTCTGGCTCCAAGCGAATCTAACGTCTCTA
CCAAAGCTGAAATCACTTCTACGAAAGCTGAAATGACCTCTACCGAAACA
ATGACTGAGAAAACCTCAGAATCAAAAAATGTTGCACCAGAAGAGAAAGT
GTCTTCGACCACAACGCCAGTAAAACCCACTACTACACAATCAACACAAT
CACCAACAAAGGTAACATCAAAAACCAAAACTACAGCCTCGGAGAAAGTG
ACCACAATGGCTCCACCAGCTACTCAGTCACCGGTAAAACAAACTACCAA
ACCATCTGAACAACCAAAACCAACAACAATGTCTCCAAAAACAGAATCCA
AAGACGATAAAATGTCTTCAGTCACTTCGGGAGACAACCAAAAAAATCAA
ACAACAACAAAAGGGACAGTTGAAAATATGGCAACCTCTACTAAAGCGAC
ATCGTCAGAAACAACACCTAAAGTAGGAGAAAGTACAACAAAAGCAGCAC
CTGAAACAACCCAGAAGATCACTACAACAACAAAGATGTTTCCGCTAAAA
CCACAAGCCGCTGATTCACAAGCCACAAGACAATCTAACTCTACAGATGC
TGTGACAACAGAAGAAACAGTTAAGACGACAACAGTCTCGAAACCTGTCG
TGATAACATCAATGCCGGCAACCACGAAAAACATGACTACGTCTGAAGCT
ATGGCTACAACAACAACAACAACAACAACAACGACGCAGCCACCTGCTGT
GATATTAGCAGATACAACCACAACAACTACTAGCACTCCAACGACCACAA
CCACAACCAGCCAATCCCCAACTACAAGTACAACAACCACTCAATCTCCT
GTCATAACGAAGAGCACAACCTCTGTTCCAACAACAACAACAGCAACAAC
AACAACAACAACAACAACAACAACAACAAAATCAGTCCCTGAAACCACTA
CAAAGATGATAAGCCATACAACAACAACACCTTTGCAAACCACTCTTCCC
GTAACTACAACAGAAGGAAAGACGGAACGATCTGGGCCTTCAACTAGGAT
TAAAACAGAAACAAATGTACCAACACTTATTCCAACCGGTGCTGCATCTA
CCAAAGACAAAGGACAAGCAGTCGACATTGCCGTCATCGTGACGGTCATA
GCTGCTCTACTTGTCGTTTTGCTTGTTGTCGGTTTCTTTGTGTACCGACG
ACGTCTCGCAAGTAACCGTCGCGAAAGTGTAGTGAGTAAAAGTTTGGTAG
AAAATTCTGATAAAGACATTGAAATGAAAGGTGACGGAAATGCTACAAAA
AATGGAAAGAAAGATTCGACAAGTGACGGAGAACATTTAATCGATTAAAC
CTGCCGATTATATATAGTTATACGATTATTTTTAATGATTAAATTTGCGT
ACTAGTCTAGTAAATACGAGTCAAAAACGTTAAAAAAAAAAATAGAAAAC
GCGTTTTCTTAATAGCTACATACACTACACAATATTGCTGAATGCCGGCA
ATTAATTGAAGAGGTGTCCGCAATATATTGCCAGCTTGATTTGCAATTTT
CCAACAATATAGGGAGATTGTTTACAGAAAATTCCTTTTTATGATAGAGC
AACTGTTGTTTACTCCGTACGTACGTACGTACGGTCCGAAAACTATATTG
GCGACTATTGCTCACCAATATATTGTGTAGTCTAAGTAGGGCTAATCCTA
AAGTCTATTCCAAAAAAATGGTAGTCCGCAAATTTTTATACATTGCTCTT
GAAGGAGAAATTTTTTGCCAATTTTCTAAGAACAGATTTTAGATTAAATT
TCGCGATTAAGTTTTAAAGGTGATTTTTGCACACAGTACTATTTAGGAAT
TAATTATTATATCAGAAGGAAATGTATATTATAATAAATCTCTCTTTGTA
AATGTGAAATTATGTCATTTTTCAGTAGGTTTTCTAAAATATCAACTTAA
TTAGAAGTTGTAGAAGAATTTATATACATAGTCGATTATATGTAAGAAAG
ATATTAATACAAACCAGTG

Coding sequence (CDS) from alignment at sc0000025:555075..563593-

>TCONS_00003193 ID=TCONS_00003193|Name=TCONS_00003193|organism=Clytia hemisphaerica|type=CDS|length=3336bp|location=Sequence derived from alignment at sc0000025:555075..563593- (Clytia hemisphaerica)
GTCAAGACGATATTTCGACGACGGTTTCAACTTCAGCAACAGAGATCACC
AGTACAGTACAAACAGAATCTACTGAACAACCAGCATCAACTTCCACATC
AAAACCAGTGGTAACTGAATCAACAGTCACCTATACGACAGATAGTGATG
ACACTACAACGCCTCAAACGGGGCCAACCATGGCGACAGAAACAACCGAA
CAGCCACAAACGCAAGCAACTAAACAACCTTCAACCACTGGGAATCCAAA
GACAACACAATCTCAAGAAGATGAAACGACCACTCTGGCTCCAAGCGAAT
CTAACGTCTCTACCAAAGCTGAAATCACTTCTACGAAAGCTGAAATGACC
TCTACCGAAACAATGACTGAGAAAACCTCAGAATCAAAAAATGTTGCACC
AGAAGAGAAAGTGTCTTCGACCACAACGCCAGTAAAACCCACTACTACAC
AATCAACACAATCACCAACAAAGGTAACATCAAAAACCAAAACTACAGCC
TCGGAGAAAGTGACCACAATGGCTCCACCAGCTACTCAGTCACCGGTAAA
ACAAACTACCAAACCATCTGAACAACCAAAACCAACAACAATGTCTCCAA
AAACAGAATCCAAAGACGATAAAATGTCTTCAGTCACTTCGGGAGACAAC
CAAAAAAATCAAACAACAACAAAAGGGACAGTTGAAAATATGGCAACCTC
TACTAAAGCGACATCGTCAGAAACAACACCTAAAGTAGGAGAAAGTACAA
CAAAAGCAGCACCTGAAACAACCCAGAAGATCACTACAACAACAAAGATG
TTTCCGCTAAAACCACAAGCCGCTGATTCACAAGCCACAAGACAATCTAA
CTCTACAGATGCTGTGACAACAGAAGAAACAGTTAAGACGACAACAGTCT
CGAAACCTGTCGTGATAACATCAATGCCGGCAACCACGAAAAACATGACT
ACGTCTGAAGCTATGGCTACAACAACAACAACAACAACAACAACGACGCA
GCCACCTGCTGTGATATTAGCAGATACAACCACAACAACTACTAGCACTC
CAACGACCACAACCACAACCAGCCAATCCCCAACTACAAGTACAACAACC
ACTCAATCTCCTGTCATAACGAAGAGCACAACCTCTGTTCCAACAACAAC
AACAGCAACAACAACAACAACAACAACAACAACAACAACAAAATCAGTCC
CTGAAACCACTACAAAGATGATAAGCCATACAACAACAACACCTTTGCAA
ACCACTCTTCCCGTAACTACAACAGAAGGAAAGACGGAACGATCTGGGCC
TTCAACTAGGATTAAAACAGAAACAAATGTACCAACACTTATTCCAACCG
GTGCTGCATCTACCAAAGACAAAGGACAAGCAGTCGACATTGCCGTCATC
GTGACGGTCATAGCTGCTCTACTTGTCGTTTTGCTTGTTGTCGGTTTCTT
TGTGTACCGACGACGTCTCGCAAGTAACCGTCGCGAAAGTGTAGTGAGTA
AAAGTTTGGTAGAAAATTCTGATAAAGACATTGAAATGAAAGGTGACGGA
AATGCTACAAAAAATGGAAAGAAAGATTCGACAAGTGACGGAGAACATTT
AATCGATTAAATGTTTCGGAGCAAAGAACTAGTTGTGGTTTTAATTTCAT
TATTGACTATTACTTATGGTCAAGACGATATTTCGACGACGGTTTCAACT
TCAGCAACAGAGATCACCAGTACAGTACAAACAGAATCTACTGAACAACC
AGCATCAACTTCCACATCAAAACCAGTGGTAACTGAATCAACAGTCACCT
ATACGACAGATAGTGATGACACTACAACGCCTCAAACGGGGCCAACCATG
GCGACAGAAACAACCGAACAGCCACAAACGCAAGCAACTAAACAACCTTC
AACCACTGGGAATCCAAAGACAACACAATCTCAAGAAGATGAAACGACCA
CTCTGGCTCCAAGCGAATCTAACGTCTCTACCAAAGCTGAAATCACTTCT
ACGAAAGCTGAAATGACCTCTACCGAAACAATGACTGAGAAAACCTCAGA
ATCAAAAAATGTTGCACCAGAAGAGAAAGTGTCTTCGACCACAACGCCAG
TAAAACCCACTACTACACAATCAACACAATCACCAACAAAGGTAACATCA
AAAACCAAAACTACAGCCTCGGAGAAAGTGACCACAATGGCTCCACCAGC
TACTCAGTCACCGGTAAAACAAACTACCAAACCATCTGAACAACCAAAAC
CAACAACAATGTCTCCAAAAACAGAATCCAAAGACGATAAAATGTCTTCA
GTCACTTCGGGAGACAACCAAAAAAATCAAACAACAACAAAAGGGACAGT
TGAAAATATGGCAACCTCTACTAAAGCGACATCGTCAGAAACAACACCTA
AAGTAGGAGAAAGTACAACAAAAGCAGCACCTGAAACAACCCAGAAGATC
ACTACAACAACAAAGATGTTTCCGCTAAAACCACAAGCCGCTGATTCACA
AGCCACAAGACAATCTAACTCTACAGATGCTGTGACAACAGAAGAAACAG
TTAAGACGACAACAGTCTCGAAACCTGTCGTGATAACATCAATGCCGGCA
ACCACGAAAAACATGACTACGTCTGAAGCTATGGCTACAACAACAACAAC
AACAACAACAACGACGCAGCCACCTGCTGTGATATTAGCAGATACAACCA
CAACAACTACTAGCACTCCAACGACCACAACCACAACCAGCCAATCCCCA
ACTACAAGTACAACAACCACTCAATCTCCTGTCATAACGAAGAGCACAAC
CTCTGTTCCAACAACAACAACAGCAACAACAACAACAACAACAACAACAA
CAACAACAAAATCAGTCCCTGAAACCACTACAAAGATGATAAGCCATACA
ACAACAACACCTTTGCAAACCACTCTTCCCGTAACTACAACAGAAGGAAA
GACGGAACGATCTGGGCCTTCAACTAGGATTAAAACAGAAACAAATGTAC
CAACACTTATTCCAACCGGTGCTGCATCTACCAAAGACAAAGGACAAGCA
GTCGACATTGCCGTCATCGTGACGGTCATAGCTGCTCTACTTGTCGTTTT
GCTTGTTGTCGGTTTCTTTGTGTACCGACGACGTCTCGCAAGTAACCGTC
GCGAAAGTGTAGTGAGTAAAAGTTTGGTAGAAAATTCTGATAAAGACATT
GAAATGAAAGGTGACGGAAATGCTACAAAAAATGGAAAGAAAGATTCGAC
AAGTGACGGAGAACATTTAATCGATTAAATGTTTCGGAGCAAAGAACTAG
TTGTGGTTTTAATTTCATTATTGACTATTACTTATG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_001762XLOC_001762Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00003193-proteinTCONS_00003193-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00003193-exon-sc0000025-1575043694:563292..563593TCONS_00003193-exon-sc0000025-1575043694:563292..563593Clytia hemisphaericaexon
TCONS_00003193-exon-sc0000025-1575043694:555075..557355TCONS_00003193-exon-sc0000025-1575043694:555075..557355Clytia hemisphaericaexon
TCONS_00003193-exon-sc0000025-1510915933:563292..563593TCONS_00003193-exon-sc0000025-1510915933:563292..563593Clytia hemisphaericaexon
TCONS_00003193-exon-sc0000025-1510915933:555075..557355TCONS_00003193-exon-sc0000025-1510915933:555075..557355Clytia hemisphaericaexon
TCONS_00003193-exon-sc0000025-1491911889:563292..563593TCONS_00003193-exon-sc0000025-1491911889:563292..563593Clytia hemisphaericaexon
TCONS_00003193-exon-sc0000025-1491911889:555075..557355TCONS_00003193-exon-sc0000025-1491911889:555075..557355Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000025supercontigsc0000025:555075..563593 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.0531866	0.0353742	0.0261278	0.0222465	0.304285	0.33626	1.32668	1.74487	0.391328	0.658934	0.213598	0.249695	0.433022	0.27061	0.294657	0.707753	43.3593	17.0219	0.367057	0.716543	48.8807	49.3497	23.4027	34.257	66.0888	55.9488	10.3102	2.55973	0.237182	0.211705
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00003193 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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