TCONS_00003191 (transcript) - C. hemisphaerica

Overview
NameTCONS_00003191
Unique NameTCONS_00003191
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1160

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00003191 ID=TCONS_00003191|Name=TCONS_00003191|organism=Clytia hemisphaerica|type=transcript|length=1160bp
AGTGAAGATTGAGATACAGAGACTGGGACGGAAAGATGCGGCCATCTTTT
TTAAAGGGTTTGGCATGTGCTCTTCTTCTGTTCATGATGCTTGTTGTATG
CTCTGAGTCAAAGAAAGGACGAAAGNTTTTAAAGGGTTTGGCATGTGCTC
TTCTTCTGTTCATGATGCTTGTTGTATGCTCTGAGTCAAAGAAAGGACGA
AAGGGTAAATGTAGAGCATGTGAAAAAATGGAGAAGGAAAAAGAGAAAGC
CGAGAAAAATATCAATGTATTAATGGAATCGTGCAAGCCCGTGCCCAAAC
AAATACAACAACTGTTTTCCACAAACATAAAGCGCAAATGGAGTAGCCGA
CAGATTAAAAATGatTTGATGGAAATTGAGAGAAGACTCAAAAGAATAGT
TGGTAAAAAATGCATGAAAGAAATTCGAAAGGTGGTTATGAAGTTTTATA
CCAAAATGATCGTGACAAAGACGACGAAGACGAAGATAAAGagaatcatt
tttaaaaagacAGTGATGAGATTTATTAGTGTCAAAAAGAGGACGATCAT
TCGGAAGACCACAAATCGAATCATGAGAATCAAAAAAGATGTCACCAAGA
ATAAGAAATTGGGAAGAACTATGAGAAATATTAACAATGCCAGAAAACAG
TGTGCTTTGATACccccaaaatgtgaaaaaagagCTGAAAGAGTTATTAG
AAGGGCAGCAGGAAAAGTCCTTCAAAATTCAGGCCAGGGCCAAGTGCCAA
AAATAACAAGAAAGCAAAAAGAGCCAATCGTAAAAGAAGCTCAAAATATT
CTAGAAAATGAACCACAAACGTTAGAGGACGAAGACGAAGAAGATGAACC
AGAACCAGAACAACAAAAAACACCAAACAAAATTCTCGCTATCTCGGAAC
CTCAGAGCTTACAAAGACCACCAGCACCTCCTATTCCTATTCCGGTATGT
TTATCGCCCAAGCTGACACACTGACAGTAGTTCCAACGGGAGGCCTCGAT
AGTTGGTACTTAATCTGAAAACTACGCTCCAAAAATTACGGACAAGAATT
CGGGCATCAAAATTTAATACAGTAAAGAGAAAATTTAACCatatttgagc
aaattttgGCAATAAATTGACCCTACCGATGCatctttgaaagtttttgt
ccATTCTAAg
Run BLAST on NCBI

protein sequence of TCONS_00003191-protein

>TCONS_00003191-protein ID=TCONS_00003191-protein|Name=TCONS_00003191-protein|organism=Clytia hemisphaerica|type=polypeptide|length=312bp
MRPSFLKGLACALLLFMMLVVCSESKKGRKXLKGLACALLLFMMLVVCSE
SKKGRKGKCRACEKMEKEKEKAEKNINVLMESCKPVPKQIQQLFSTNIKR
KWSSRQIKNDLMEIERRLKRIVGKKCMKEIRKVVMKFYTKMIVTKTTKTK
IKRIIFKKTVMRFISVKKRTIIRKTTNRIMRIKKDVTKNKKLGRTMRNIN
NARKQCALIPPKCEKRAERVIRRAAGKVLQNSGQGQVPKITRKQKEPIVK
EAQNILENEPQTLEDEDEEDEPEPEQQKTPNKILAISEPQSLQRPPAPPI
PIPVCLSPKLTH
Run BLAST on NCBI

transcript from alignment at sc0000025:537568..547590-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00003191 ID=TCONS_00003191|Name=TCONS_00003191|organism=Clytia hemisphaerica|type=transcript|length=10023bp|location=Sequence derived from alignment at sc0000025:537568..547590- (Clytia hemisphaerica)
AGTGAAGATTGAGATACAGAGACTGGGACGGAAAGATGCGGCCATCTTTT
TTAAAGGGTTTGGCATGTGCTCTTCTTCTGTTCATGATGCTTGTTGTATG
CTCTGAGTCAAAGAAAGGACGAAAGNTTTTAAAGGGTTTGGCATGTGCTC
TTCTTCTGTTCATGATGCTTGTTGTATGCTCTGAGTCAAAGAAAGGACGA
AAGGGTAAATGTAGAGCATGTGAAAAAATGGAGAAGGAAAAAGAGAAAGC
CGAGAAAAATATCAATGTATTAATGGAATCGTGCAAGCCCGTGCCCAAAC
AAATACAACAACTGTTTTCCACAAACATAAAGCGCAAATGGAGTAGCCGA
CAGATTAAAAATGGTTTGTTAAACTTTCTTTTTTATAATACACGTTTTTT
TTAATAAGAATATCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNTTTTTTATTTTAATGTACAGTTT
TGAAAATATTTAGATACCAATGATCGAATTGTAACATTAGTAACTTTGCA
GTGAATCACTATTCAAAATTTGAGAACCAAAAGGACTATTTTATAAAAAG
TTATTCGTGAAAAACTGAAAACCGGTTTCTACAAAACATTCACTGCTAGG
GAAGAAAACCATAGACAGCGTACTTTCAACACAAAAAGTTTAAGCCTCAA
ATTCCACCTAAATTTTCAGATAGAGGGTACCTCTATTCTTTGTAGGTTTT
AAGGGGTATCCACCGGTAACAACAAATCTAGGATCAAAATACTAAATTAT
AAAAAATGAGTGTTATTGTGTATTGTTAACCGGTTACTTTTTCAAAGCGG
GCTACACGGCTTTTTGCGCAATGCTATTGGTTCTTTTTGCATGACGACGG
GCCTACACTGTCCAAAGTTGCCCGTCGTTAGGAAAATTCATTGTGACGTC
ACTTTTTTAAAGGAAAATGAACAATGCATTGACATCATTTCTCTCATTTT
TTATTTCTGATATCAGAAATAATAACAATTTTTGATCTCTTTTCGCTTGT
TTTTTTCGCTTTATTTCGCTATTTTTCCTGGACAAAGCGCTGAAAATCAA
TCCAATGAAGGAAACGGTTAACAAATACAATAATGACCGGTTTTTTTCGG
GATGTACTGAAAATATTGTCTTCGGTCAACGCAACAGCCTCGCAAGCTGG
GTTGTTACTTGACCTCGGGCAATATTTCTCAGTACAGCCCTCACTAACCG
GTCATTATTGTATTAATTCAGGTTAACAAATTACCAGTTGGTCTAAAAAT
TATAAATTTGAGAAACTATTTGACAATCACATAAGTGGTTGATAATAAAG
TGCTCAGACAGGCTGGAATCAATTTCAGTATACAGTAGTGTCTCCGGAAA
AAAAGCCGAACAACATTTAAATACCCAAAATAAATAATCCTCGTAATTTT
TATGACCTTGTAAAACTGAATTAATGCCCGTTTTATTACTTCGGAAATTG
ATTCTCTATTGAACGAACAAAGAAAATTTTAATTACATCTTGCATAGTTC
TAATACGCAATCTACTGGCAGATTTAACAAAAAAGAGCAAGTACGTCGGA
AACACGCGAAGGAGTGCAAAACGTTTGTTAAAAGAAAATGGAATTACAAT
TGAAAATCTCGACATGGTCTAAAACCATGGCAATGGCAATCTACTTATTT
TTTTCCATTTTAGATTTGATGGAAATTGAGAGAAGACTCAAAAGAATAGT
TGGTAAAAAATGCATGAAAGAAATTCGAAAGGTGGTTATGAAGTTTTATA
CCAAAATGATCGTGACAAAGACGACGAAGACGAAGATAAAGAGAATCATT
TTTAAAAAGACAGTGATGAGATTTATTAGGTAAGCATATCCAATACGCAA
TGTGTCTGCTGAAGAGAATTTTTTTTCATAATGTAAATGAAAATTTTATG
ATATGACACTTTAAGGGCTCTGACCATATGTAGTGAATTTTGATATTTGT
CACGTACAAAATATAAATTTCTGCCTGATGTAGCTAACAAAACTTTGACA
TGATANAGCAAAAATAGGGTCGGTCGTGCCCGTAGAACAACAAACTAAAT
TGGTCTAGCCTAAGCACGTTTTTCTGTTGATGTGTTTCATGTTTGATCTC
GTATTGGTTTTATTATACAGTCAATATCCAAGATCAATTCTGCCGTATTT
TACCAAAATTTATGAGTCTGCCAATTTGCTGGGACAAGTTGGAGTTTTTG
CAAATACTTATTTGATTTGGTTATGGTCGTTAACCCTTAATACAGTGAAC
CAATTGTTACTTTTTATAAAGAACGCGTCATCTATATTACATCAAATGAC
CAATGAGTGAAGTATCTTGTAAATACTCCAGATCATTCCAATTTTCTACA
TGTTCGGAAAAAAAGCGGAACAGATTCTACAGCACCTGACCCCGAGAATG
TAGGTGAAATTTGAATCAGACCTGAGAGATGTAGATTTGCATTTAAAAAA
ATATTGAATGTTTTAAATGAAATTTTGAACTCCCAAAATCCTTTCCCAGG
GGTTAGTTTCATTACTTTTGATAGCTAGGCTAATTTTTTTGGTCCTTGAA
GTTGACTCCCATTTTCGTTATAACCCCCAGAATGTAGGTTTGGTTTTATG
GCATTAAATCTAGTAATAGTAAAATGTTGATATTTTTTCGATTGAATTAA
TTATAACAGGAAATTTTAGAAATATTTTATGCCAAAACAATANGAATTAA
TTATAACAGGAAATTTTAGAAATATTTTATGCCAAAACAATATTCTAAAG
AGCTTTTGTTATTCTGAAAATTGGATTTTTTCGCATTTTAACCCCCAGAA
TGTAGGTGAAAAGATTCGGTTGCTGAGAGCGAAATTTCAGTATTCATCGG
AAATTTTTGTTCTCTAAGTGATATTCATACTTTAGAAATATACTCTGACA
AAAAATTAACAAAGATATTAATTTTATTGTGCTACAAATGATGAAAAGTA
AAAGAAAGGACGAAAATAAGAGACAAGAAAGTTGTTTTTATTTTGTAGGT
TGAAGATTCTGTGTTAAAATATGTGAATAATGTAACCCGGTGGAACTTTT
CCCACATAGGGTCAAACATTTCTACTAAATTCCCAATGGGGATAGAAATT
CTATTGTTCCAAACAAAGGCAAATTTTCCGATTGGACTGGGGTCCCAGCG
GGTCTGGGACACGTCGTAAAAGCTTAAAATGCCAACATTAATCATCTCTC
AGGTAATACTTTCATGTTATGAAAGTACAACAAAAAAGTTTTGTAATAGA
CTATTTTCCACATTTCCTTAGTTCATTAGGAATAAGAAAATACCGTATCA
TCATAACTTAATTCCAATAGATTTCGATTTAGAGAGGATTTATTTAAAAA
ATGTCTCAATTCGAGTAGTATCCAATCAACNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNTTTAAAACAGTTCAATTTTTTGCGATCAGTTTG
AAAAAAATTCGAAACGGAAAGGTTAATTATCCATTTAAACTTATCACTTT
TTATAAAAAGAGGGTAATGCAACATATTATAACGTCTTTTTTAAAGTTCA
TAACGTCATTTACTGTATTGTAATTAAATTCTTAATTTAAATGCAATATT
CTTTGTTAAAAGTGTAAAGGAACCTACCTGAAACATAACTTTTATGCTCA
AATACCAAAATCAATTTTTTTACTATGGTCAGAGCCCTTAAGCGCTATTT
CCACCAGTGCGATTTTTTTCATCGCCTTATTTTTTGATTGGAAAAATCAG
TAGGAGTGGATTATCATACTGTAAAGTGCTTTTGAGGGGAGAGGATAAAA
TACACTTTTTATTTGCAAGTTTTAATGTTAAAGATTTTCCCCAGCGTTGT
CCGAGATATTACCATGATAGTTAAACTGGCTTCGCTCACTATTGAGAAAT
TAAATGTATTTCTTGCTTATGAGAGAAATGTAAATGATTTCTTGTATTTT
CCAAGGAAAATGAACAACAAAATTTTCTTGTATATTGAATTAGAACCTTG
ATTAAAACATTTTCCTAAATTTTCCAAGGAAAATTATGCAGATAAAATGT
CTCGTATTTTCAAAGGAAATTTACCGTAAATAATTTGTGTATTCTCCAAG
GAAAATTAAATAAAACAGATGGTAAGGGAAATAATTTAAACAGATTCTTT
TATTTTTTGAGGCAAATCGACCGATAAACAATTTCTTGTATTTTCCAAGG
AAAAAATTAAGATAATTTTAATATGTTTCAAGAAAATTATCTAAAGCAAT
TTTTTGCTACTTTCATTAAGCTGACTTTTCAAGTAAAGTAAAAAATAGTA
GGGTTATTTTGAAAGGAAATCGAATCGAAAATGCCTTTTTTTTCAATCTA
GTGGCAAGGACAAAAGATCTTGCATTGCTAAAATCAACCAAAATCAAGAG
TATCTCTTGAGTAAAACTATTCTTATTCTAGAAGTAGTTCAGCCATCGTG
GCTAGCCATCGTTGGCGGACATTCGAGGGTGATTCTGAAAGACTTTGAAT
GAATAGCTTTGAAAAATGAGTGTTCGTATTTCAAAGCGCTCTTCATAGTT
CACATGGGTAGAAACGTGGGGGTGGAAAGGGAGAAGTTTTCAAAAGGGGG
AGGGTTCATCTAGAAGTTTCTAGTTTTGCAGTCTTGGAGTGAGTAAAAAT
CCTAAAAAAATTCTATTATAACCCTTTTAGTGCTACGGTCTTTTTTTCTA
AGTTTTCTTTTTAAATCTTCTAAAATTTTCTAGGTAATTTTTTTAATGAA
CTAACGTTCAAACTTTAAAGGCGATGAAAAGGTGCCTAGTTCAAATCAAT
TCGNCTTCTAAAATTTTCTAAGTAATTTTTTTAATGAACTAACGTTCAAA
CTTTAAAGGCGATGAAAAGGTGCCTAGTTCAAATCAAACCACTAGAGGAT
AGAATAAAGTAAAATAGGGTCTAAATTTGGAGGTTCTTTGATCACTCGTT
GACCAAAAATGGTCAAAAAAGGTCAAAATCTCAAAAAAGTGAGCTTTTTT
GCTTAAAATCCCACAAGAAAGACTCACTTTTGAATTTTTTTAATCGAACT
TCATCGTTCGATGGATCTCGATTAGTTCGGTTGTCCGATCGGTTTGAAAA
GTTCGATCGGGTCTGGACTATATCATGTTGAATAAATCAAAAAATTCAGC
ATCAAAATAAAATTTTAAAAATTGTGATTGTCTTTGGTTGAGTGCGAATC
AATTTTTCTTTTCGATTGGGTTAGGCAAGACAAATTTTATCTATTGTTCT
ATGGGAATAAATGATAAATAAATAAATTGTACCATCCCCTAAGGGGAATT
GGCCTAAAAATTTTTAGACATTAAAAAACTAGCACATTTAGAATATTCAT
TGCGCTAGCTTCTATGGGAAGACCTTCAGAAAATATTGGTCGGACGGCCG
AAGGTCAAAATCTGNCGGCCGATATGATAGAAGAAAAATGTCTTAAAAGC
TAGGGTTGGAAGGTCAAAATCAAAAAGATTTGTGACATTTTTCTTCTTCG
ATGAGCGATTTTCGTGACATGTCCATTGTAATATTTTACGAGAAATCAAT
CATAACTTGATGAAATCAAAAGAAATCATGTCATTCATTGTATTTTCTAA
ATCGATTCTTTCTCAACCTGTTTCAATTCCATTCAGTCCATGTTCATACG
TTACCGTTCCGTTTTGCTACGGATCGAGTGAGTTCATATTGGAACGTTTC
GGAGCAAGAAAACGGAGCAGTTCCGTTCTGATGAAAAAAGTGGAGCGAAA
TCGTTTCGATCTGTTTTGCTTTGTAACGTCTTCTTTTTAGACGTTTCGAA
TTATTTGACGTTCACACAGTGTTTCGGAACGGTTTCGGAACGGAACCGTA
ACGTCTGAACATGGTCTCAGTCCTATTATTTTTGGTAATGAAGTTGTAGT
AATAACATTCTTTATTTGTTTCGTTTGTACACAGTGTCAAAAAGAGGACG
ATCATTCGGAAGACCACAAATCGAATCATGAGAATCAAAAAAGATGTCAC
CAAGAATAAGAAATTGGGAAGAACTATGAGAAATATTAACAATGCCAGAA
AACAGTGTGCTTTGATACCCCCAAAATGTGAAAAAAGAGCTGAAAGAGTT
ATTAGAAGGGCAGCAGGAAAAGTCCTTCAAAATTCAGTAAGTAACTAAAT
AAAAGGACTAGAAGGCTCCTCTTTCGATAATAGCTATCTATCCAAATGTA
GGGGAGAAACAACTCTTTCTCGCTCCCTGGATTGCTCAATATGACCCTTT
ACTTTGATTGCTGAGCATTCAGCAGGGAGTCCTAAGTACTACTCTGTTAT
CTTTGATATTGCGGCTCACATTAAAAAGGTTTACATTTTTTATTACTTGA
CAAAAAGAAATAACTAGACGGTTCCCTTCGTCGCAAACGCCGGTTTAGCA
TGCGTGGGGGAGGATATTTTTATTCCAACCCCCCCCCNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAT
TGATAGAACTTATCAAGGGTCCCCCCTTTACTAACGGTTTTTTCGAAGTC
TGAAAATCAAATATCTGAGGCTACCAACGGATTCAGCGTGAAAAGTAGAA
AGAGAAAATGGGGTTATTTGTTAAGTTTCGACCACCTGTTACCGAGAAAT
GGCATTTTTTAGGCGAAAAATCGACGCTTTTAGCGTTTTCCGATGACGTT
TTTCTAGAGGGATTTTCAGAAAAAATCTTTATCACGGCTGGATAGCCCTG
AATTAATAGTATCCAAAAATGGTATGGTTTGTCAGTTTTCGATGTCTAGA
TCTCGAGATATTTTGGTTTAAATATTGAAAATGATCGATATTTTTTCCTG
AGTCAGCAGTTTTTCAGCTTATTTACCCACCTTACAAAATGAAATATCTC
AAGATCGGAACATCGAAAGTTGACAAACCATACCGTTTTCGGCTGTTCTT
ATATCTAGGGCAAAGTTGAGACATTTTAGGCTTTAAATCCAGTTTTTAAT
ACTTTGACCATTAAATGTTCTCGAATTGCGTTCTTATTTTTCGATGATTT
TGAGCCTTATATTGTTCTTATAAAATTATTCTTACTAAAAAGAGTTTATG
ATTCATCAAAATAATCATTTATTTCTTGTTAATTGATGATAGAAATACAA
ACGATTCTGTGGTTAATATGTTTTGGCTGAGTTGCCTTCTCCTCAGTTTC
GGTTTTTTCTCTTTTATAAAGGGCCAGGGCCAAGTGCCAAAAATAACAAG
AAAGCAAAAAGAGCCAATCGTAAAAGAAGCTCAAAATATTCTAGAAAATG
AACCACAAACGTTAGAGGGTATGTATGTTGTATTATTATTTCTTTTAACT
TAAAGTTCGTAGCATTTTCTAGGGGACACGGAAACAAATCTTCTCGGGAC
ACAAGTCGCATGGATATGTTTCATTGTGTCCCCACATCAGATATCGCTTT
TTTGCAACATTTTCCTCTAGATGTTTTTGTTGCTGAAAGAAAAAGAAAAA
ATCAAACCAGTTAGTTAATATCAAACAAATTCATTTTTATTGCAATCGCA
CAAAAAATGTTTCTGTGTCCCCAAAGCTTTAGCCTATTCCGTAATGGAAA
GCTGACATTGTCCATAAATTTGTTCTTAGTTTATCGCAAAAGAACCTCCT
GTTCTCAAAAAAAATATGCACTATTTTCTTTCATTATGAAGACGAAGACG
AAGAAGATGAACCAGAACCAGAACAACAAAAAACACCAAACAAAATTCTC
GCTATCTCGGAACCTCAGAGCTTACAAAGACCACCAGCACCTCCTATTCC
TATTCCGGTATGTTTATCGCCCAAGCTGACACACTGACAGTAGTTCCAAC
GGGAGGCCTCGATAGTTGGTACTTAATCTGAAAACTACGCTCCAAAAATT
ACGGACAAGAATTCGGGCATCAAAATTTAATACAGTAAAGAGAAAATTTA
ACCATATTTGAGCAAATTTTGGCAATAAATTGACCCTACCGATGCATCTT
TGAAAGTTTTTGTCCATTCTAAG

Coding sequence (CDS) from alignment at sc0000025:537568..547590-

>TCONS_00003191 ID=TCONS_00003191|Name=TCONS_00003191|organism=Clytia hemisphaerica|type=CDS|length=4695bp|location=Sequence derived from alignment at sc0000025:537568..547590- (Clytia hemisphaerica)
ACGAAGACGAAGAAGATGAACCAGAACCAGAACAACAAAAAACACCAAAC
AAAATTCTCGCTATCTCGGAACCTCAGAGCTTACAAAGACCACCAGCACC
TCCTATTCCTATTCCGGTATGTTTATCGCCCAAGCTGACACACTGAGGCC
AGGGCCAAGTGCCAAAAATAACAAGAAAGCAAAAAGAGCCAATCGTAAAA
GAAGCTCAAAATATTCTAGAAAATGAACCACAAACGTTAGAGGTGTCAAA
AAGAGGACGATCATTCGGAAGACCACAAATCGAATCATGAGAATCAAAAA
AGATGTCACCAAGAATAAGAAATTGGGAAGAACTATGAGAAATATTAACA
ATGCCAGAAAACAGTGTGCTTTGATACCCCCAAAATGTGAAAAAAGAGCT
GAAAGAGTTATTAGAAGGGCAGCAGGAAAAGTCCTTCAAAATTCAATTTG
ATGGAAATTGAGAGAAGACTCAAAAGAATAGTTGGTAAAAAATGCATGAA
AGAAATTCGAAAGGTGGTTATGAAGTTTTATACCAAAATGATCGTGACAA
AGACGACGAAGACGAAGATAAAGAGAATCATTTTTAAAAAGACAGTGATG
AGATTTATTAGATGCGGCCATCTTTTTTAAAGGGTTTGGCATGTGCTCTT
CTTCTGTTCATGATGCTTGTTGTATGCTCTGAGTCAAAGAAAGGACGAAA
GNTTTTAAAGGGTTTGGCATGTGCTCTTCTTCTGTTCATGATGCTTGTTG
TATGCTCTGAGTCAAAGAAAGGACGAAAGGGTAAATGTAGAGCATGTGAA
AAAATGGAGAAGGAAAAAGAGAAAGCCGAGAAAAATATCAATGTATTAAT
GGAATCGTGCAAGCCCGTGCCCAAACAAATACAACAACTGTTTTCCACAA
ACATAAAGCGCAAATGGAGTAGCCGACAGATTAAAAATGACGAAGACGAA
GAAGATGAACCAGAACCAGAACAACAAAAAACACCAAACAAAATTCTCGC
TATCTCGGAACCTCAGAGCTTACAAAGACCACCAGCACCTCCTATTCCTA
TTCCGGTATGTTTATCGCCCAAGCTGACACACTGAGGCCAGGGCCAAGTG
CCAAAAATAACAAGAAAGCAAAAAGAGCCAATCGTAAAAGAAGCTCAAAA
TATTCTAGAAAATGAACCACAAACGTTAGAGGTGTCAAAAAGAGGACGAT
CATTCGGAAGACCACAAATCGAATCATGAGAATCAAAAAAGATGTCACCA
AGAATAAGAAATTGGGAAGAACTATGAGAAATATTAACAATGCCAGAAAA
CAGTGTGCTTTGATACCCCCAAAATGTGAAAAAAGAGCTGAAAGAGTTAT
TAGAAGGGCAGCAGGAAAAGTCCTTCAAAATTCAATTTGATGGAAATTGA
GAGAAGACTCAAAAGAATAGTTGGTAAAAAATGCATGAAAGAAATTCGAA
AGGTGGTTATGAAGTTTTATACCAAAATGATCGTGACAAAGACGACGAAG
ACGAAGATAAAGAGAATCATTTTTAAAAAGACAGTGATGAGATTTATTAG
ATGCGGCCATCTTTTTTAAAGGGTTTGGCATGTGCTCTTCTTCTGTTCAT
GATGCTTGTTGTATGCTCTGAGTCAAAGAAAGGACGAAAGNTTTTAAAGG
GTTTGGCATGTGCTCTTCTTCTGTTCATGATGCTTGTTGTATGCTCTGAG
TCAAAGAAAGGACGAAAGGGTAAATGTAGAGCATGTGAAAAAATGGAGAA
GGAAAAAGAGAAAGCCGAGAAAAATATCAATGTATTAATGGAATCGTGCA
AGCCCGTGCCCAAACAAATACAACAACTGTTTTCCACAAACATAAAGCGC
AAATGGAGTAGCCGACAGATTAAAAATGACGAAGACGAAGAAGATGAACC
AGAACCAGAACAACAAAAAACACCAAACAAAATTCTCGCTATCTCGGAAC
CTCAGAGCTTACAAAGACCACCAGCACCTCCTATTCCTATTCCGGTATGT
TTATCGCCCAAGCTGACACACTGAGGCCAGGGCCAAGTGCCAAAAATAAC
AAGAAAGCAAAAAGAGCCAATCGTAAAAGAAGCTCAAAATATTCTAGAAA
ATGAACCACAAACGTTAGAGGTGTCAAAAAGAGGACGATCATTCGGAAGA
CCACAAATCGAATCATGAGAATCAAAAAAGATGTCACCAAGAATAAGAAA
TTGGGAAGAACTATGAGAAATATTAACAATGCCAGAAAACAGTGTGCTTT
GATACCCCCAAAATGTGAAAAAAGAGCTGAAAGAGTTATTAGAAGGGCAG
CAGGAAAAGTCCTTCAAAATTCAATTTGATGGAAATTGAGAGAAGACTCA
AAAGAATAGTTGGTAAAAAATGCATGAAAGAAATTCGAAAGGTGGTTATG
AAGTTTTATACCAAAATGATCGTGACAAAGACGACGAAGACGAAGATAAA
GAGAATCATTTTTAAAAAGACAGTGATGAGATTTATTAGATGCGGCCATC
TTTTTTAAAGGGTTTGGCATGTGCTCTTCTTCTGTTCATGATGCTTGTTG
TATGCTCTGAGTCAAAGAAAGGACGAAAGNTTTTAAAGGGTTTGGCATGT
GCTCTTCTTCTGTTCATGATGCTTGTTGTATGCTCTGAGTCAAAGAAAGG
ACGAAAGGGTAAATGTAGAGCATGTGAAAAAATGGAGAAGGAAAAAGAGA
AAGCCGAGAAAAATATCAATGTATTAATGGAATCGTGCAAGCCCGTGCCC
AAACAAATACAACAACTGTTTTCCACAAACATAAAGCGCAAATGGAGTAG
CCGACAGATTAAAAATGACGAAGACGAAGAAGATGAACCAGAACCAGAAC
AACAAAAAACACCAAACAAAATTCTCGCTATCTCGGAACCTCAGAGCTTA
CAAAGACCACCAGCACCTCCTATTCCTATTCCGGTATGTTTATCGCCCAA
GCTGACACACTGAGGCCAGGGCCAAGTGCCAAAAATAACAAGAAAGCAAA
AAGAGCCAATCGTAAAAGAAGCTCAAAATATTCTAGAAAATGAACCACAA
ACGTTAGAGGTGTCAAAAAGAGGACGATCATTCGGAAGACCACAAATCGA
ATCATGAGAATCAAAAAAGATGTCACCAAGAATAAGAAATTGGGAAGAAC
TATGAGAAATATTAACAATGCCAGAAAACAGTGTGCTTTGATACCCCCAA
AATGTGAAAAAAGAGCTGAAAGAGTTATTAGAAGGGCAGCAGGAAAAGTC
CTTCAAAATTCAATTTGATGGAAATTGAGAGAAGACTCAAAAGAATAGTT
GGTAAAAAATGCATGAAAGAAATTCGAAAGGTGGTTATGAAGTTTTATAC
CAAAATGATCGTGACAAAGACGACGAAGACGAAGATAAAGAGAATCATTT
TTAAAAAGACAGTGATGAGATTTATTAGATGCGGCCATCTTTTTTAAAGG
GTTTGGCATGTGCTCTTCTTCTGTTCATGATGCTTGTTGTATGCTCTGAG
TCAAAGAAAGGACGAAAGNTTTTAAAGGGTTTGGCATGTGCTCTTCTTCT
GTTCATGATGCTTGTTGTATGCTCTGAGTCAAAGAAAGGACGAAAGGGTA
AATGTAGAGCATGTGAAAAAATGGAGAAGGAAAAAGAGAAAGCCGAGAAA
AATATCAATGTATTAATGGAATCGTGCAAGCCCGTGCCCAAACAAATACA
ACAACTGTTTTCCACAAACATAAAGCGCAAATGGAGTAGCCGACAGATTA
AAAATGACGAAGACGAAGAAGATGAACCAGAACCAGAACAACAAAAAACA
CCAAACAAAATTCTCGCTATCTCGGAACCTCAGAGCTTACAAAGACCACC
AGCACCTCCTATTCCTATTCCGGTATGTTTATCGCCCAAGCTGACACACT
GAGGCCAGGGCCAAGTGCCAAAAATAACAAGAAAGCAAAAAGAGCCAATC
GTAAAAGAAGCTCAAAATATTCTAGAAAATGAACCACAAACGTTAGAGGT
GTCAAAAAGAGGACGATCATTCGGAAGACCACAAATCGAATCATGAGAAT
CAAAAAAGATGTCACCAAGAATAAGAAATTGGGAAGAACTATGAGAAATA
TTAACAATGCCAGAAAACAGTGTGCTTTGATACCCCCAAAATGTGAAAAA
AGAGCTGAAAGAGTTATTAGAAGGGCAGCAGGAAAAGTCCTTCAAAATTC
AATTTGATGGAAATTGAGAGAAGACTCAAAAGAATAGTTGGTAAAAAATG
CATGAAAGAAATTCGAAAGGTGGTTATGAAGTTTTATACCAAAATGATCG
TGACAAAGACGACGAAGACGAAGATAAAGAGAATCATTTTTAAAAAGACA
GTGATGAGATTTATTAGATGCGGCCATCTTTTTTAAAGGGTTTGGCATGT
GCTCTTCTTCTGTTCATGATGCTTGTTGTATGCTCTGAGTCAAAGAAAGG
ACGAAAGNTTTTAAAGGGTTTGGCATGTGCTCTTCTTCTGTTCATGATGC
TTGTTGTATGCTCTGAGTCAAAGAAAGGACGAAAGGGTAAATGTAGAGCA
TGTGAAAAAATGGAGAAGGAAAAAGAGAAAGCCGAGAAAAATATCAATGT
ATTAATGGAATCGTGCAAGCCCGTGCCCAAACAAATACAACAACTGTTTT
CCACAAACATAAAGCGCAAATGGAGTAGCCGACAGATTAAAAATG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_001760XLOC_001760Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00003191-exon-sc0000025-1575043694:547228..547590TCONS_00003191-exon-sc0000025-1575043694:547228..547590Clytia hemisphaericaexon
TCONS_00003191-exon-sc0000025-1575043694:544012..544177TCONS_00003191-exon-sc0000025-1575043694:544012..544177Clytia hemisphaericaexon
TCONS_00003191-exon-sc0000025-1575043694:539655..539856TCONS_00003191-exon-sc0000025-1575043694:539655..539856Clytia hemisphaericaexon
TCONS_00003191-exon-sc0000025-1575043694:538273..538369TCONS_00003191-exon-sc0000025-1575043694:538273..538369Clytia hemisphaericaexon
TCONS_00003191-exon-sc0000025-1575043694:537568..537899TCONS_00003191-exon-sc0000025-1575043694:537568..537899Clytia hemisphaericaexon
TCONS_00003191-exon-sc0000025-1510915933:547228..547590TCONS_00003191-exon-sc0000025-1510915933:547228..547590Clytia hemisphaericaexon
TCONS_00003191-exon-sc0000025-1510915933:544012..544177TCONS_00003191-exon-sc0000025-1510915933:544012..544177Clytia hemisphaericaexon
TCONS_00003191-exon-sc0000025-1510915933:539655..539856TCONS_00003191-exon-sc0000025-1510915933:539655..539856Clytia hemisphaericaexon
TCONS_00003191-exon-sc0000025-1510915933:538273..538369TCONS_00003191-exon-sc0000025-1510915933:538273..538369Clytia hemisphaericaexon
TCONS_00003191-exon-sc0000025-1510915933:537568..537899TCONS_00003191-exon-sc0000025-1510915933:537568..537899Clytia hemisphaericaexon
TCONS_00003191-exon-sc0000025-1491911889:547228..547590TCONS_00003191-exon-sc0000025-1491911889:547228..547590Clytia hemisphaericaexon
TCONS_00003191-exon-sc0000025-1491911889:544012..544177TCONS_00003191-exon-sc0000025-1491911889:544012..544177Clytia hemisphaericaexon
TCONS_00003191-exon-sc0000025-1491911889:539655..539856TCONS_00003191-exon-sc0000025-1491911889:539655..539856Clytia hemisphaericaexon
TCONS_00003191-exon-sc0000025-1491911889:538273..538369TCONS_00003191-exon-sc0000025-1491911889:538273..538369Clytia hemisphaericaexon
TCONS_00003191-exon-sc0000025-1491911889:537568..537899TCONS_00003191-exon-sc0000025-1491911889:537568..537899Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00003191-proteinTCONS_00003191-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000025supercontigsc0000025:537568..547590 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.0373057	0	0	0	0.100618	0	0.322363	0.134705	0	0.0778791	0.340161	0	0.198487	0.154598	0	0	31.9046	32.0581	0.0793136	0.373482	13.6163	13.4211	2.06035	1.39398	20.7737	14.8961	0	0	0	0
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00003191 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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