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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00003165 ID=TCONS_00003165|Name=TCONS_00003165|organism=Clytia hemisphaerica|type=transcript|length=919bp
GATTGgaattaaggccggtctccacttgcgcatgCTGCAACTctgaaaca
aatccaatcaagtAAACAGGAAACATTGGGAGAAAATCAGTGTACCAATT
TGTATAGCTTAACCAGCCTTGACTTGAAGGTCTCGGTCCAGCTTGGACCT
GGCAAATTAGGCCAAATATACATGGGAATTCACTgggtttgtgtgttttt
accactgaaattagtacaatgtacttacttctcagtgtgtatcaattcag
aacaccaccctttttagtacagtgtaccaactttttcattgtatttttct
cagaggaccacccttttagtacactgtactaactttttcattgtattttt
ctcagaggaccacccttttagtacactgtactaactttttcattgtattt
ttctcagaggaccacccttttagtacactgtactaactcaatttaatcta
aaaaatacaccaccccaccagctatgggccagtacactgactcgATACCC
CCCTCTGATTGATACTTGTTCGATTGGCTTTCTCCTTCTTTCTTTTCGTT
TGTTTCAATCGAACGGACACGCATTTTTACGACGTGATTAACTGTCGCAT
TGATaattaagaaaatatttaaaagtttagtTTCACATTCTACATTCACA
GATAAAATTGTATTACTTTATTCTAGGTTATGGTCGTACCGTGGCGAAAT
CAATGCTTGGAAAATGTCTGGTCATGACCTATGCTACGTTTAGTATTCCC
ATCACAACGGCATCAGTGGTATTTTGTGGAAGATTCATCACAGCTGTCAT
CAAATATTTCGTCATCTCTTTCGAATCAAGAGTATTGAAACACAACAAAA
TCACAAAGTTTCAACGCAAAGTTACTTCAATCATAGTCATGTTGAATACG
TTGGTGATTCTGATGTTAG Run BLAST on NCBI transcript from alignment at sc0000025:362152..363070- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00003165 ID=TCONS_00003165|Name=TCONS_00003165|organism=Clytia hemisphaerica|type=transcript|length=919bp|location=Sequence derived from alignment at sc0000025:362152..363070- (Clytia hemisphaerica)
GATTGGAATTAAGGCCGGTCTCCACTTGCGCATGCTGCAACTCTGAAACA
AATCCAATCAAGTAAACAGGAAACATTGGGAGAAAATCAGTGTACCAATT
TGTATAGCTTAACCAGCCTTGACTTGAAGGTCTCGGTCCAGCTTGGACCT
GGCAAATTAGGCCAAATATACATGGGAATTCACTGGGTTTGTGTGTTTTT
ACCACTGAAATTAGTACAATGTACTTACTTCTCAGTGTGTATCAATTCAG
AACACCACCCTTTTTAGTACAGTGTACCAACTTTTTCATTGTATTTTTCT
CAGAGGACCACCCTTTTAGTACACTGTACTAACTTTTTCATTGTATTTTT
CTCAGAGGACCACCCTTTTAGTACACTGTACTAACTTTTTCATTGTATTT
TTCTCAGAGGACCACCCTTTTAGTACACTGTACTAACTCAATTTAATCTA
AAAAATACACCACCCCACCAGCTATGGGCCAGTACACTGACTCGATACCC
CCCTCTGATTGATACTTGTTCGATTGGCTTTCTCCTTCTTTCTTTTCGTT
TGTTTCAATCGAACGGACACGCATTTTTACGACGTGATTAACTGTCGCAT
TGATAATTAAGAAAATATTTAAAAGTTTAGTTTCACATTCTACATTCACA
GATAAAATTGTATTACTTTATTCTAGGTTATGGTCGTACCGTGGCGAAAT
CAATGCTTGGAAAATGTCTGGTCATGACCTATGCTACGTTTAGTATTCCC
ATCACAACGGCATCAGTGGTATTTTGTGGAAGATTCATCACAGCTGTCAT
CAAATATTTCGTCATCTCTTTCGAATCAAGAGTATTGAAACACAACAAAA
TCACAAAGTTTCAACGCAAAGTTACTTCAATCATAGTCATGTTGAATACG
TTGGTGATTCTGATGTTAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00003165-exon-sc0000025-1575043694:362152..363070 | TCONS_00003165-exon-sc0000025-1575043694:362152..363070 | Clytia hemisphaerica | exon |
| TCONS_00003165-exon-sc0000025-1510915933:362152..363070 | TCONS_00003165-exon-sc0000025-1510915933:362152..363070 | Clytia hemisphaerica | exon |
| TCONS_00003165-exon-sc0000025-1491911889:362152..363070 | TCONS_00003165-exon-sc0000025-1491911889:362152..363070 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000025 | supercontig | sc0000025:362152..363070 - |
Blast
The following BLAST results are available for this feature:
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