TCONS_00003160 (transcript) - C. hemisphaerica

Overview
NameTCONS_00003160
Unique NameTCONS_00003160
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2778

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00003160 ID=TCONS_00003160|Name=TCONS_00003160|organism=Clytia hemisphaerica|type=transcript|length=2778bp
cggagtttttggtttttctagaacagcgatgcattgtgggattgtttcgg
gggtacaatagaattccctcgatgaattcaaaagagatttctattgtaat
acccctgaaacaatcccacaatgcatcgcttttttagaaaaatcaaaaac
tccgataagatctatttatACATTTAAACTCCCTGCACAAGCTGGCGATT
TTAATAAGTGTCTACTACCCCTATATGAGGCTCGCATTAGTAAGACAGTG
TTATGCTTATTGAAATTTATGtggtatttttgaataaaaaagcgTTAGGT
TATCTTGATGAAAGTACTTTTAATCAATATCTGTAAATCATTTTTACATT
TAAACTCCCTACACAAGCTGCACAATTTCATATCAATCAGATACAGTGTA
AGAAGCGCATGTTGTAAAAGATAAAATATGAAGTTGACATTGTTTTTTGT
TGCAGCACTCATCTTTGCAGTCCAATGTGAGGCGAGATGGTCTGATAACT
TTGATGATGAATACCAAGAGAGAATGGACATGATGAACCAAAGAAGAATT
GAAGGAATTGAAAATTATCGCAAAGCATTTTTGGATGAAAGACGAAGAGA
ATTGCGaatgaaaaagttcaaaaaattcAACGATGACATCCGCTCGGAAA
TGGAAAGAAAGAACGCTGAAAGTCTTGAAGATGTGTACGAAGATAAATAT
TTCTCCTTAAACCCCAATGTCAGAAGTTTAgtttcaaaaaatgataaacC
CGAGGAAAACAAAAAGCCCGAGGAAAACGAAAAACCCAAGGAAGACGAAA
ATCCCGAGGAAAAGgaaaaaccaaaagaaaacgaaaagcccgaggaaaag
gaaaaacccaaggaaaacaaaaagcccgaggaaaaggaaaaaccaaaaga
aaacgaaaagcccgaggaaaaggaaaaacccaaggaaaacaaaaagcccg
aggaaaaggaaaaacacaaagaaaagaaaaagccCGAGGAGAAGGAAAAA
AccgaaaaaagtgaaaagcCTGAGGAAAAGGAAAAGCCCGAGGAGAAGGA
AAAAACCGAAGAAAGTGAAAAGCCCGAAGAAAAGGAAAAACCCGAAGAAA
GTGAAAAGCCCGAAGAAAAGGAAAAACCCGAGGAAAACAAGAAACCAGAA
GAGACGGAGAAGCCTGAGGAAAAGGAAAAGCCGTTTGTTTTCCCATTCGA
ACCGCAAATGGTGGAAATCAAGTTTAAAACTGAACATGTATCTCGTACTC
AAAAGATGACAGCAggtggtttgaaaaagtttgcTTGTAAAACAGTTGGA
TACCTCCGTTGTTTAGATTTCGGTAAAGGCCCAAAGGATTGCTTTTTACA
TCGTCAAGAAGATGAATGCCAAGAAGTTCGTGCAATCCCGCTACCACCAG
CTTTTGCTTTCAAAGATGAGTCAAAAAGATATGTGTAAACGTTTAAATGA
TCAAAATTTAATACATATATACCCAGCATCCATTTTTGCcgaagtacccc
ccccccccccggggcacCATACTgatcatatttcttttttcgGGCTCTGA
ACAGATCTGATAGATATAAGATTTCGTTGTTATTTTTGTTAGGAATTTAT
CTCAAGCAGGGTTTTTGGAACTTTATGGAATACTAAAAGCACGCCCCAAT
CAGCATTCAAGTGTATTATATcttacaccccttctcacaggccCACTGTG
ACCCCTTGCAACtggaaaaatcggccaaaatatcgtcccggtggaaaatt
acccTCCAATATTtgttcccactgaaaataatcaaacaaaccaatcctca
ctgcgaAATATGATATGCTATAATAGGAGTGTGATAAATTGCGTAGGTTG
CGTGCCTTCATGGgtcggaaaaaaattcgtgggtctcgtaaaaaaattcg
tgggtcgcGTAAAAAgattcgtgggtccagaaaaaaattcgtgggtccat
gaaaaaaactCGTGggtctatgaaaaaaattcgtgggttcagaAATAAAA
TTCGTGGGTCCTGAGAAAAATttgtgggtccatgaaaaaaattcgtaaaa
aataAACCCGTAATTTGAGCCCATgggaagaaatctttttttttttcaat
tgcatGAAATAAGTTTGTTAGTAAAAATTgcactatttttgaaaaaaaaa
atatttctctctTTATAGCTAGGATTTCGTAATAAATCttttgaatacac
gttttttttttattagaacgtcTTAATTTTAGCTGAGGCTGGATGTGCCt
attttctcatcaattttcagcctgaaatgttcttattgcCGTTCTTGAAA
TCGATTCGCTTAAAGTCCAATAAAACCTTTGAATGTCGATATTGGGTTAA
AAATCGAGTAAATTTGCTATTATTTTTAGATGAGAGGAATAATTACAGTA
ATAATTGCACAAAATTCCTTtagaaatctaaagatttttaaacgaaTTTC
GTCAAACTATTCGATTCTCAGGCTGGACAtgttcttataatgttcttaaa
tttttgccaaatttcagcctaaatgttcttacaaactgggttctaatgaa
aaaaaaaaacgtgtagagccAAGTTTCTGTTCTATTGTATTAAATTTAAA
GTGTAAATTGTAAGATTAATATTCTGACACCTTATGGCTCGTGTCTTGTC
GTGTATGTCATTTCcgtaaaatttcttcttttgataatttttaacggttc
taggaaaattgcccccgagaaaactgccccccggaaaactgcccccggaa
aattgccccccggaaaattgccccctag
Run BLAST on NCBI

protein sequence of TCONS_00003160-protein

>TCONS_00003160-protein ID=TCONS_00003160-protein|Name=TCONS_00003160-protein|organism=Clytia hemisphaerica|type=polypeptide|length=336bp
MKLTLFFVAALIFAVQCEARWSDNFDDEYQERMDMMNQRRIEGIENYRKA
FLDERRRELRMKKFKKFNDDIRSEMERKNAESLEDVYEDKYFSLNPNVRS
LVSKNDKPEENKKPEENEKPKEDENPEEKEKPKENEKPEEKEKPKENKKP
EEKEKPKENEKPEEKEKPKENKKPEEKEKHKEKKKPEEKEKTEKSEKPEE
KEKPEEKEKTEESEKPEEKEKPEESEKPEEKEKPEENKKPEETEKPEEKE
KPFVFPFEPQMVEIKFKTEHVSRTQKMTAGGLKKFACKTVGYLRCLDFGK
GPKDCFLHRQEDECQEVRAIPLPPAFAFKDESKRYV
Run BLAST on NCBI

transcript from alignment at sc0000025:296540..303329-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00003160 ID=TCONS_00003160|Name=TCONS_00003160|organism=Clytia hemisphaerica|type=transcript|length=6790bp|location=Sequence derived from alignment at sc0000025:296540..303329- (Clytia hemisphaerica)
CGGAGTTTTTGGTTTTTCTAGAACAGCGATGCATTGTGGGATTGTTTCGG GGGTACAATAGAATTCCCTCGATGAATTCAAAAGAGATTTCTATTGTAAT ACCCCTGAAACAATCCCACAATGCATCGCTTTTTTAGAAAAATCAAAAAC TCCGATAAGATCTATTTATACATTTAAACTCCCTGCACAAGCTGGCGATT TTAATAAGTGTCTACTACCCCTATATGAGGCTCGCATTAGTAAGACAGTG TTATGCTTATTGAAATTTATGTGGTATTTTTGAATAAAAAAGCGTTAGGT TATCTTGATGAAAGTACTTTTAATCAATATCTGTAAATCATTTTTACATT TAAACTCCCTACACAAGCTGCACAATTTCATATCAATCAGATACAGTGTA AGAAGCGCATGTTGTAAAAGATAAAATATGAAGTTGACATTGTTTTTTGT TGCAGCACTCATCTTTGCAGTCCAATGTACGTATATGTTTTTACCTGTAT GTAATATAGTGTTTGTTTCGAATGATTGACACACTTTTGAGATATTTACC TTTGGGGTAAAATTTTTAATTCTATCCTCTTTAAATTGACTTTTAGACTT TCTGGAAAATCTAATTTCGCATCGACCTGTTTTTTTTTTGTAAAATCATG TTTTTCGAAGGTAAAATCATGTTTTTCGAAGGTAAAATCATGTTTTTCGA ATGTAAAAATATGTTTTTCGAAGTTAAAATCATATTTTTCAACGACCCAA TCGGCTTACACATAATTACCGTGAACACCATAACTTAGTTTCCTCCTAAA ATTAAGCTGTGAAAGACAAACTGTAAGGATTTTACTGCGCACGTCTGAAT CACATTACTATCCAAAGAATCGAAGATGAAGAACACATAGTTAAAGCTCA AGTAGATTTTTATAATTTTCGATTTCCAGCTACCTTAAGAGAGGAAATTT TGGCAAATGAGCCCATTCGCCAATTTTGGTGCAATTTGGTGGAATTTATT TTGACGATTTAATAAAATTTCTAAATTTGGCGAGAATTAATTTTTGCGAA CGACCCGATTTTGTTCAATATTTTAGCAGAAAAAAAGGTTTTTAGGAAAA ATAGAGACTAAATTGAAGGAAAATTAAATTTGGCGAGAATTTATTTTGGC GAATGACCTATAAATTTAAATTTCTTTCCGCCAAAATTTCTTCCCTTACC GTATTTAAAACTCTTCTGAGACTTTAATGAAAAATTAATGGAACGTGTTT CCTTCAAAAGAAACCGAGAATGCGCGAGTTGAAGGTCCGGGGTCTCGCCG TATGTTACGTTTTGAGATTTCACTCTTTCATCGCATCAAATCTTTTCTAC GTTTCTTATTCGTTATTTGATTTACACCCCTGTCTCACAGCCCCGATGGA ACTTTTTTCCTCAGTGGGGCTGAAATTTCAGGGTATTTTCCCACCGGGGA CGAAGTTTTTGTTAAGTTTTCCAGTAAGGCTGGGGTTCCAGCGGGTCTGT GACACAGAGGTGTGGATTTCATTCAAGATCCTGGAGGATTGTCATGGTTA CTTTTGTTCTCACCGAATGCGCATCGAATGAAATCATAAAACATAATTTC ATAATTTTCATTTGTTGCTTTTGTTATCGATATATCAGGTGAGGCGAGAT GGTCTGATAACTTTGATGATGAATACCAAGAGAGAATGGACATGATGAAC CAAAGAAGAATTGAAGGAATTGAAAATTATCGCAAAGCATTTTTGGATGA AAGACGAAGAGAATTGCGAATGAAAAAGTTCAAAAAATTCAACGGTAAAC CATTTCTTTCATATTTAAATGTTTTTCAACTCACTCAATATAACTTCTTC GACCGTAGTCGCACGGTCAGGTGCGTGCCACTTTATTATTTAANAACTCA CTCAATACAACTTCTTCGACCGTAGTCGCACGGTCAGGTGCGTGCCACTT TATTATTTAATTATACCCCTAAACTCAATCCAATCCTCTTTTTACACCTT TTTCTATTGTCTATAGGTGCGAAAGAAAGACTGGGACGGTTTTAGGGAGG TGAAATGGCCAAAAAAATGCCCGCGCGGCAATTGGCGGCTACGGTCGAAA AGGTGTATACTGCGGTTTTTTCTATCACGCAAGATTTTCCTTATTTTCTT TGCTCGTTATGATTTTCAAAGCTCTTTCAAGAGAAGAGGAGTTATGGTAA CACTTTCCTTCTCATGACACCCCCTTGGCTGATTCTGAGTAATTGATTTT GAGATTTCCTTAATTTCTTTTTTTTAAATTTATAATATATATGCTGTAAT ATTTGTTTATTTAAGATGACATCCGCTCGGAAATGGAAAGAAAGAACGCT GAAAGTCTTGAAGATGTGTACGAAGATAAATATTTCTCCTTAAACCCCAA TGTCAGAAGTTTAGTTTCAAAAAATGATAAACCCGAGGAAAACAAAAAGC CCGAGGAAAACGAAAAACCCAAGGAAGACGAAAATCCCGAGGAAAAGGAA AAACCAAAAGAAAACGAAAAGCCCGAGGAAAAGGAAAAACCCAAGGAAAA CAAAAAGCCCGAGGAAAAGGAAAAACCAAAAGAAAACGAAAAGCCCGAGG AAAAGGAAAAACCCAAGGAAAACAAAAAGCCCGAGGAAAAGGAAAAACAC AAAGAAAAGAAAAAGCCCGAGGAGAAGGAAAAAACCGAAAAAAGTGAAAA GCCTGAGGAAAAGGAAAAGCCCGAGGAGAAGGAAAAAACCGAAGAAAGTG AAAAGCCCGAAGAAAAGGAAAAACCCGAAGAAAGTGAAAAGCCCGAAGAA AAGGAAAAACCCGAGGAAAACAAGAAACCAGAAGAGACGGAGAAGCCTGA GGAAAAGGAAAAGCCGTTTGTTTTCCCATTCGGTAGGTTTTATATCATCA TTGAAATTAAAGCGCCCACGGGAATTTACACGACAGCAAATTATTCTTTT TTCCATGTTACATGATAGACAGGGTGCGTTTACACTGAAAGGCTTCCTTA ATTAAATTGTTATTATACAGGGTGTCCCTAATAAAAGTATCGAGTTTGAA CATGCGATTGAGTAAAAAAGTTTGTGTGTGTTATCGCTAAAATATAAGAA CGTTCTCCATCACANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNCCCCCCCCCCCCCCGTTTATTTGGAACCTAAGAGTAAGCTAA CAGGATTAATGTAATTTTTGATAAAACGATGAATAGCCCAAACTATTCAT ATAATTTTTGGATGAAAAAAGATGGTTGCACGTTAACTTTTTCTTTTCAG AAAATATTCTATTTCCCAAAACACAGGAGAAAAGCCGTTAAATCTTTTGT ACGCATATTTTCCGATTTTTCCTGTGTTGCTGTGGGAAATGAAATTCTTT TTTTCAAAATTAAACATAAAAATGGCCGTCAGTGGAAAAAACCATTGCTG TCACTTTTAATCGATCCTCCTTGATTAAGAGTCGTTAGCTCTATTGTCTT ATGGTAGGAGCACCCTTTAAAACAAAAGAAGCATAAACAAAGGATGCGTG CAATGAACAAGTTTTGCGATTTCAAACTCAAATGACTTGGAGAAAAAGGA TGTATCATCACAGTGGCTGCGTTTAGACCAGCCTGGCATTTGTAATTGCT TGCAGTATTCTTTTGAATTCTATTGTTCCGCGCAATTGTTCGGTTTGTCA AATGCCTAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNTGCTTTTCATTGTTTGATCTGTCAAA GTTGAACTTGAGGGAATCACCTTTTCAGTAATGACTCTAAAAAGACGATT CCTTAAATGCCATGACAGAAAATACAAAGGAAAAGATATTAAAATCGAAT CCCTCATGAGCAAATGCCAAATTACAAATGCCAGTTGGTCTAAACGCAGC CAGTGTTGCTTGAAAATTGCTTGTAAAATGGGAACAAAGAAGTGCACGAT TTTCTCCTTTTGTCTCTTATTAAATAACTTTGCACCCGGGGGGAGGCACT GGGTTTGCGGACTGACGGTATGTGCGGGCCAAAAATTGGCTTTTAAAATT GCCCCCCTACGGTGCAGCAAAAATCAGTGAAAATCACACCCTTAGAGTAA ATTTTTCCCCATATTTTCGATCCCTTTCGTGCAAAAAATGGTCAAAATTC TAGCATTTTTCGTCAAAATATCTAGATTTTTCAAGAATTTTCTGAAATTT CTCTAATTTTTCCGACCCTTACAGTGCATTTTAAACATATTGGAAAAGGT ACCCTTAGGACCCGCACATACCCGTCGGTCCTTTTGCCCAGCTGCCCCCC CCCCGGGACTTTGCACGATCGCATGATCATATCTCAAGCAACCAGTGTAT TCATCCATCATAAATCTCTTTGTTAAGGAAATTTAAGGAAATTACTAATC AAGGAAACCTTTTAGTGTAAACGCGCCCACAATAACGTTATTGAACATCA GGCGTGAAAAATAAAAGTCTTAATAGCTTAATATCTTTTTAAAAATATCT TTCACGTTTAGAACCGCAAATGGTGGAAATCAAGTTTAAAACTGAACATG TATCTCGTACTCAAAAGATGACAGCAGGTGGTTTGAAAAAGTTTGCTTGT AAAACAGTTGGATACCTCCGTTGTTTAGATTTCGGTAAAGGCCCAAAGGA TTGCTTTTTACATCGTCAAGAAGATGAATGCCAAGAAGTTCGTGCAATCC CGCTACCACCAGCTTTTGCTTTCAAAGATGAGTCAAAAAGATATGTGTAA ACGTTTAAATGATCAAAATTTAATACATATATACCCAGCATCCATTTTTG CCGAAGTACCCCCCCCCCCCCCGGGGCACCATACTGATCATATTTCTTTT TTCGGGCTCTGAACAGATCTGATAGATATAAGATTTCGTTGTTATTTTTG TTAGGAATTTATCTCAAGCAGGGTTTTTGGAACTTTATGGAATACTAAAA GCACGCCCCAATCAGCATTCAAGTGTATTATATCTTACACCCCTTCTCAC AGGCCCACTGTGACCCCTTGCAACTGGAAAAATCGGCCAAAATATCGTCC CGGTGGAAAATTACCCTCCAATATTTGTTCCCACTGAAAATAATCAAACA AACCAATCCTCACTGCGAAATATGATATGCTATAATAGGAGTGTGATAAA TTGCGTAGGTTGCGTGCCTTCATGGGTCGGAAAAAAATTCGTGGGTCTCG TAAAAAAATTCGTGGGTCGCGTAAAAAGATTCGTGGGTCCAGAAAAAAAT TCGTGGGTCCATGAAAAAAACTCGTGGGTCTATGAAAAAAATTCGTGGGT TCAGAAATAAAATTCGTGGGTCCTGAGAAAAATTTGTGGGTCCATGAAAA AAATTCGTAAAAAATAAACCCGTAATTTGAGCCCATGGGAAGAAATCTTT TTTTTTTTCAATTGCATGAAATAAGTTTGTTAGTAAAAATTGCACTATTT TTGAAAAAAAAAATATTTCTCTCTTTATAGCTAGGATTTCGTAATAAATC TTTTGAATACACGTTTTTTTTTTATTAGAACGTCTTAATTTTAGCTGAGG CTGGATGTGCCTATTTTCTCATCAATTTTCAGCCTGAAATGTTCTTATTG CCGTTCTTGAAATCGATTCGCTTAAAGTCCAATAAAACCTTTGAATGTCG ATATTGGGTTAAAAATCGAGTAAATTTGCTATTATTTTTAGATGAGAGGA ATAATTACAGTAATAATTGCACAAAATTCCTTTAGAAATCTAAAGATTTT TAAACGAATTTCGTCAAACTATTCGATTCTCAGGCTGGACATGTTCTTAT AATGTTCTTAAATTTTTGCCAAATTTCAGCCTAAATGTTCTTACAAACTG GGTTCTAATGAAAAAAAAAAACGTGTAGAGCCAAGTTTCTGTTCTATTGT ATTAAATTTAAAGTGTAAATTGTAAGATTAATATTCTGACACCTTATGGC TCGTGTCTTGTCGTGTATGTCATTTCCGTAAAATTTCTTCTTTTGATAAT TTTTAACGGTTCTAGGAAAATTGCCCCCGAGAAAACTGCCCCCCGGAAAA CTGCCCCCGGAAAATTGCCCCCCGGAAAATTGCCCCCTAG

Coding sequence (CDS) from alignment at sc0000025:296540..303329-

>TCONS_00003160 ID=TCONS_00003160|Name=TCONS_00003160|organism=Clytia hemisphaerica|type=CDS|length=4044bp|location=Sequence derived from alignment at sc0000025:296540..303329- (Clytia hemisphaerica)
AACCGCAAATGGTGGAAATCAAGTTTAAAACTGAACATGTATCTCGTACT
CAAAAGATGACAGCAGGTGGTTTGAAAAAGTTTGCTTGTAAAACAGTTGG
ATACCTCCGTTGTTTAGATTTCGGTAAAGGCCCAAAGGATTGCTTTTTAC
ATCGTCAAGAAGATGAATGCCAAGAAGTTCGTGCAATCCCGCTACCACCA
GCTTTTGCTTTCAAAGATGAGTCAAAAAGATATGTGTAAATGACATCCGC
TCGGAAATGGAAAGAAAGAACGCTGAAAGTCTTGAAGATGTGTACGAAGA
TAAATATTTCTCCTTAAACCCCAATGTCAGAAGTTTAGTTTCAAAAAATG
ATAAACCCGAGGAAAACAAAAAGCCCGAGGAAAACGAAAAACCCAAGGAA
GACGAAAATCCCGAGGAAAAGGAAAAACCAAAAGAAAACGAAAAGCCCGA
GGAAAAGGAAAAACCCAAGGAAAACAAAAAGCCCGAGGAAAAGGAAAAAC
CAAAAGAAAACGAAAAGCCCGAGGAAAAGGAAAAACCCAAGGAAAACAAA
AAGCCCGAGGAAAAGGAAAAACACAAAGAAAAGAAAAAGCCCGAGGAGAA
GGAAAAAACCGAAAAAAGTGAAAAGCCTGAGGAAAAGGAAAAGCCCGAGG
AGAAGGAAAAAACCGAAGAAAGTGAAAAGCCCGAAGAAAAGGAAAAACCC
GAAGAAAGTGAAAAGCCCGAAGAAAAGGAAAAACCCGAGGAAAACAAGAA
ACCAGAAGAGACGGAGAAGCCTGAGGAAAAGGAAAAGCCGTTTGTTTTCC
CATTCGGTGAGGCGAGATGGTCTGATAACTTTGATGATGAATACCAAGAG
AGAATGGACATGATGAACCAAAGAAGAATTGAAGGAATTGAAAATTATCG
CAAAGCATTTTTGGATGAAAGACGAAGAGAATTGCGAATGAAAAAGTTCA
AAAAATTCAACGATGAAGTTGACATTGTTTTTTGTTGCAGCACTCATCTT
TGCAGTCCAATAACCGCAAATGGTGGAAATCAAGTTTAAAACTGAACATG
TATCTCGTACTCAAAAGATGACAGCAGGTGGTTTGAAAAAGTTTGCTTGT
AAAACAGTTGGATACCTCCGTTGTTTAGATTTCGGTAAAGGCCCAAAGGA
TTGCTTTTTACATCGTCAAGAAGATGAATGCCAAGAAGTTCGTGCAATCC
CGCTACCACCAGCTTTTGCTTTCAAAGATGAGTCAAAAAGATATGTGTAA
ATGACATCCGCTCGGAAATGGAAAGAAAGAACGCTGAAAGTCTTGAAGAT
GTGTACGAAGATAAATATTTCTCCTTAAACCCCAATGTCAGAAGTTTAGT
TTCAAAAAATGATAAACCCGAGGAAAACAAAAAGCCCGAGGAAAACGAAA
AACCCAAGGAAGACGAAAATCCCGAGGAAAAGGAAAAACCAAAAGAAAAC
GAAAAGCCCGAGGAAAAGGAAAAACCCAAGGAAAACAAAAAGCCCGAGGA
AAAGGAAAAACCAAAAGAAAACGAAAAGCCCGAGGAAAAGGAAAAACCCA
AGGAAAACAAAAAGCCCGAGGAAAAGGAAAAACACAAAGAAAAGAAAAAG
CCCGAGGAGAAGGAAAAAACCGAAAAAAGTGAAAAGCCTGAGGAAAAGGA
AAAGCCCGAGGAGAAGGAAAAAACCGAAGAAAGTGAAAAGCCCGAAGAAA
AGGAAAAACCCGAAGAAAGTGAAAAGCCCGAAGAAAAGGAAAAACCCGAG
GAAAACAAGAAACCAGAAGAGACGGAGAAGCCTGAGGAAAAGGAAAAGCC
GTTTGTTTTCCCATTCGGTGAGGCGAGATGGTCTGATAACTTTGATGATG
AATACCAAGAGAGAATGGACATGATGAACCAAAGAAGAATTGAAGGAATT
GAAAATTATCGCAAAGCATTTTTGGATGAAAGACGAAGAGAATTGCGAAT
GAAAAAGTTCAAAAAATTCAACGATGAAGTTGACATTGTTTTTTGTTGCA
GCACTCATCTTTGCAGTCCAATAACCGCAAATGGTGGAAATCAAGTTTAA
AACTGAACATGTATCTCGTACTCAAAAGATGACAGCAGGTGGTTTGAAAA
AGTTTGCTTGTAAAACAGTTGGATACCTCCGTTGTTTAGATTTCGGTAAA
GGCCCAAAGGATTGCTTTTTACATCGTCAAGAAGATGAATGCCAAGAAGT
TCGTGCAATCCCGCTACCACCAGCTTTTGCTTTCAAAGATGAGTCAAAAA
GATATGTGTAAATGACATCCGCTCGGAAATGGAAAGAAAGAACGCTGAAA
GTCTTGAAGATGTGTACGAAGATAAATATTTCTCCTTAAACCCCAATGTC
AGAAGTTTAGTTTCAAAAAATGATAAACCCGAGGAAAACAAAAAGCCCGA
GGAAAACGAAAAACCCAAGGAAGACGAAAATCCCGAGGAAAAGGAAAAAC
CAAAAGAAAACGAAAAGCCCGAGGAAAAGGAAAAACCCAAGGAAAACAAA
AAGCCCGAGGAAAAGGAAAAACCAAAAGAAAACGAAAAGCCCGAGGAAAA
GGAAAAACCCAAGGAAAACAAAAAGCCCGAGGAAAAGGAAAAACACAAAG
AAAAGAAAAAGCCCGAGGAGAAGGAAAAAACCGAAAAAAGTGAAAAGCCT
GAGGAAAAGGAAAAGCCCGAGGAGAAGGAAAAAACCGAAGAAAGTGAAAA
GCCCGAAGAAAAGGAAAAACCCGAAGAAAGTGAAAAGCCCGAAGAAAAGG
AAAAACCCGAGGAAAACAAGAAACCAGAAGAGACGGAGAAGCCTGAGGAA
AAGGAAAAGCCGTTTGTTTTCCCATTCGGTGAGGCGAGATGGTCTGATAA
CTTTGATGATGAATACCAAGAGAGAATGGACATGATGAACCAAAGAAGAA
TTGAAGGAATTGAAAATTATCGCAAAGCATTTTTGGATGAAAGACGAAGA
GAATTGCGAATGAAAAAGTTCAAAAAATTCAACGATGAAGTTGACATTGT
TTTTTGTTGCAGCACTCATCTTTGCAGTCCAATAACCGCAAATGGTGGAA
ATCAAGTTTAAAACTGAACATGTATCTCGTACTCAAAAGATGACAGCAGG
TGGTTTGAAAAAGTTTGCTTGTAAAACAGTTGGATACCTCCGTTGTTTAG
ATTTCGGTAAAGGCCCAAAGGATTGCTTTTTACATCGTCAAGAAGATGAA
TGCCAAGAAGTTCGTGCAATCCCGCTACCACCAGCTTTTGCTTTCAAAGA
TGAGTCAAAAAGATATGTGTAAATGACATCCGCTCGGAAATGGAAAGAAA
GAACGCTGAAAGTCTTGAAGATGTGTACGAAGATAAATATTTCTCCTTAA
ACCCCAATGTCAGAAGTTTAGTTTCAAAAAATGATAAACCCGAGGAAAAC
AAAAAGCCCGAGGAAAACGAAAAACCCAAGGAAGACGAAAATCCCGAGGA
AAAGGAAAAACCAAAAGAAAACGAAAAGCCCGAGGAAAAGGAAAAACCCA
AGGAAAACAAAAAGCCCGAGGAAAAGGAAAAACCAAAAGAAAACGAAAAG
CCCGAGGAAAAGGAAAAACCCAAGGAAAACAAAAAGCCCGAGGAAAAGGA
AAAACACAAAGAAAAGAAAAAGCCCGAGGAGAAGGAAAAAACCGAAAAAA
GTGAAAAGCCTGAGGAAAAGGAAAAGCCCGAGGAGAAGGAAAAAACCGAA
GAAAGTGAAAAGCCCGAAGAAAAGGAAAAACCCGAAGAAAGTGAAAAGCC
CGAAGAAAAGGAAAAACCCGAGGAAAACAAGAAACCAGAAGAGACGGAGA
AGCCTGAGGAAAAGGAAAAGCCGTTTGTTTTCCCATTCGGTGAGGCGAGA
TGGTCTGATAACTTTGATGATGAATACCAAGAGAGAATGGACATGATGAA
CCAAAGAAGAATTGAAGGAATTGAAAATTATCGCAAAGCATTTTTGGATG
AAAGACGAAGAGAATTGCGAATGAAAAAGTTCAAAAAATTCAACGATGAA
GTTGACATTGTTTTTTGTTGCAGCACTCATCTTTGCAGTCCAAT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_001749XLOC_001749Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00003160-exon-sc0000025-1575043694:302854..303329TCONS_00003160-exon-sc0000025-1575043694:302854..303329Clytia hemisphaericaexon
TCONS_00003160-exon-sc0000025-1575043694:301536..301691TCONS_00003160-exon-sc0000025-1575043694:301536..301691Clytia hemisphaericaexon
TCONS_00003160-exon-sc0000025-1575043694:300448..301014TCONS_00003160-exon-sc0000025-1575043694:300448..301014Clytia hemisphaericaexon
TCONS_00003160-exon-sc0000025-1575043694:296540..298118TCONS_00003160-exon-sc0000025-1575043694:296540..298118Clytia hemisphaericaexon
TCONS_00003160-exon-sc0000025-1510915933:302854..303329TCONS_00003160-exon-sc0000025-1510915933:302854..303329Clytia hemisphaericaexon
TCONS_00003160-exon-sc0000025-1510915933:301536..301691TCONS_00003160-exon-sc0000025-1510915933:301536..301691Clytia hemisphaericaexon
TCONS_00003160-exon-sc0000025-1510915933:300448..301014TCONS_00003160-exon-sc0000025-1510915933:300448..301014Clytia hemisphaericaexon
TCONS_00003160-exon-sc0000025-1510915933:296540..298118TCONS_00003160-exon-sc0000025-1510915933:296540..298118Clytia hemisphaericaexon
TCONS_00003160-exon-sc0000025-1491911889:302854..303329TCONS_00003160-exon-sc0000025-1491911889:302854..303329Clytia hemisphaericaexon
TCONS_00003160-exon-sc0000025-1491911889:301536..301691TCONS_00003160-exon-sc0000025-1491911889:301536..301691Clytia hemisphaericaexon
TCONS_00003160-exon-sc0000025-1491911889:300448..301014TCONS_00003160-exon-sc0000025-1491911889:300448..301014Clytia hemisphaericaexon
TCONS_00003160-exon-sc0000025-1491911889:296540..298118TCONS_00003160-exon-sc0000025-1491911889:296540..298118Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00003160-proteinTCONS_00003160-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000025supercontigsc0000025:296540..303329 -
Expression

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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.646334 0.644032 0.421784 0.403538 0.163323 0.0263552 0.290276 0.466089 0.171742 0.139436 0.0783965 0.145501 0.164784 0.306129 0.130148 0.0854526 0.165624 0.49252 0.114922 0.0193081 53.494 47.8618 85.9153 109.817 230.293 110.548 19.5341 5.6284 0.246475 0.387778
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00003160 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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