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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00003159 ID=TCONS_00003159|Name=TCONS_00003159|organism=Clytia hemisphaerica|type=transcript|length=220bp
TTCAGCCATGGATATTTCAAATCTAAAGTTTGCCCAAGAGCTTTGTTCGC
TCTTCTATCATCACCAAAGTCACCTTGATATTTGCCATCTTTTACTTCTT
CGCTCACATACTTACCAATGTTTTGATAACATTCTTCTTTGATTTCATAT
AGATTCTTTCTCAAAGCGTAAATCAacttcaaccatttttgaatcTCAAC
AACTGTGCTTGTTTTTGAAC Run BLAST on NCBI transcript from alignment at sc0000025:275650..277132- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00003159 ID=TCONS_00003159|Name=TCONS_00003159|organism=Clytia hemisphaerica|type=transcript|length=1483bp|location=Sequence derived from alignment at sc0000025:275650..277132- (Clytia hemisphaerica)
TTCAGCCATGGATATTTCAAATCTAAAGTTTGCCCAAGAGCTTTGTTCGC
TCTTCTATCATCACCAAAGTCACCTTGATATTTGCCATCTTTTACTTCTT
CGCTCACATACTTACCAATGTTTTGATAACATTCTTCTTTGATTTCATAT
AGATTCTTTCTCAAAGCGTAAATCAACTTCAACCATTTTTGAATCTCGAC
AACTGTGCTTGTTTTTGAACCTACACATTTTTTAAGCATAATCAAATAAA
AACGTAAGATTTTGATGGCAAAAATATTAAGAACAACTTAGGAACATTTT
AAGGCTTCCCAGACTCTAAAACCTCTTAGAACATCACATGAAAATAAGGC
CAATAAGGGGAGAGTAAAAACATTTTAAGAACGTTACCAGACTTAAAACT
AAAATAAAAATTAAGAACATCCGAAGGCTTCAAACTTTTGGAGGTTGTTT
TAAAAAATGTGTTAAATTACTGAGGGATGTAGGTGTCAATCCAAGGTCAA
CATTTAAAATCCCAGGATAGGGAGATCACTGCGCTTAACTAGAATAGAAT
ACCGTATTACTTTGAATAGGCACCCCTTTCTTTTAGAGGCCCCTTCGTTT
ATTCGAAGTAATACGATATGTTGTTTATCAACCTTGAGCGTATCGCCTAG
GGCTAGAGGCAAATCACCAATCTTTCCCAGGCAATAGGAGGGATTTCAGA
TTTCGGATTGATTTTAGCGCTTTCTTTGTTTATGCTACATTCGAAGCGAA
AAACGAAATGTAGCGGTATATGCAATCCAGCGTTTGTATGAAAAATGAAT
GGCTTAAATCCTACATAGGAGATTCGTTCCCAGCTTTTTGCTATAACATC
CCCTTTTCACAGACCTGGTAGGATTTTTTCAGCCAGTGGGGATAAAAATG
ACGGGTGGAACTTGATGGGAATACACTCTTCTCGAGATGCATAAAGTTAT
TGTTGTCCTTGTTTTCAAAAAGATTTCATTGCTATAAAATTACATATTCA
CAATGATAATTGTGTTGTTTACACCTCATGAGACATTTTGAATTTCAAGT
GCTTTTGTTTTAGAGTTAATGTTTGTCTTTTGGGAATTTAAATTGGTTTA
AATGAATAATTTCATAGCAATGAAATCTGTTTGAAAACGAGGACAACAAT
ACATTTATGCATCTCGAGAAAAGTGTATTGGTATTTCCATATCTTTTATG
GCTGAGGATCTCAATGCTTTTGTTTTCAAGAAAATTCAACAGGGATGGGA
AAAATAGCATAATGTTTTGCAGTGGGGATTGGTTTATTTGATTATTTTCA
GTGGGGACAAAAATTAGAGTATAATTTTCCATTTCTTACCTGTCANACCA
TCTTTTACTTCCCCTCTCACATATTTACCAATGTTTTGATAACATTCTTC
TTTGATTTCATATAGATTCTTTCTCAAAGCGTAAATCAACTTCAACCATT
TTTGAATCTCAACAACTGTGCTTGTTTTTGAAC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00003159-exon-sc0000025-1575043694:277003..277132 | TCONS_00003159-exon-sc0000025-1575043694:277003..277132 | Clytia hemisphaerica | exon |
| TCONS_00003159-exon-sc0000025-1575043694:275650..275739 | TCONS_00003159-exon-sc0000025-1575043694:275650..275739 | Clytia hemisphaerica | exon |
| TCONS_00003159-exon-sc0000025-1510915933:277003..277132 | TCONS_00003159-exon-sc0000025-1510915933:277003..277132 | Clytia hemisphaerica | exon |
| TCONS_00003159-exon-sc0000025-1510915933:275650..275739 | TCONS_00003159-exon-sc0000025-1510915933:275650..275739 | Clytia hemisphaerica | exon |
| TCONS_00003159-exon-sc0000025-1491911889:277003..277132 | TCONS_00003159-exon-sc0000025-1491911889:277003..277132 | Clytia hemisphaerica | exon |
| TCONS_00003159-exon-sc0000025-1491911889:275650..275739 | TCONS_00003159-exon-sc0000025-1491911889:275650..275739 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000025 | supercontig | sc0000025:275650..277132 - |
Blast
The following BLAST results are available for this feature:
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