|
|
Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00003157 ID=TCONS_00003157|Name=TCONS_00003157|organism=Clytia hemisphaerica|type=transcript|length=828bp
AAAATATCTTTATAAAAGTATTAAAGGGATTCCTGATTCAGGATTCAAAG
ATTTAATATAAGTTAGAAAGTTGAGTAAGAACAGCAACATTTTCAGGTTT
TGCGAATATCATGTAAGCTTTTTTTTAGCGTTCCTTGAAATTGAATAGCG
TCAGGAACCCTCAAATTTAATCAACTCCTTTTTCAATGTATGTTGCTTTG
TATCATCTAGATTTGtctttaattcatgatatgcaccATGGCATTATAGG
GTTCTTTTTGGTGTAAGAACTTCACCTACTACATCAACATAAAAACAACC
ATTTGCGTGTGTCAGTTGTATATGCACATTTAATTTTTGTCACATATTGA
TATCGACTTGCAGAatcatttctttgaaattttcgcTGATGTTGCGTCAT
TTCcaattctttcaaattattcTCACCGACTTTTCCACTTACTGCTACTT
CATATAACTGCAAGTGAAGCATAAATAACATATCACAGAGTAATCCAGGG
ATCTAAAAACAATAGCATCCTGCTACATTTGCTGTTTTCTTTTCTAGATA
CCATGATATATACCAAATATCCTCACATCATTGAGGTATCTTTCGCAAAG
CAGTTGATGTTACACCATTCGAATACCATTTTTAGATTCTGATCCCCGAA
TCTACCGATTTCTTTTTCGATAGTTTGGATACTCTCATAAAGGAGATGAC
ACATAAGATAGCCGCTATGACATGGAACACTACTGTGATCCAGGCTACGT
AATATGTGGTACTTGGGCTAATGAtgtctgaaaatcctttggcTGTGTAG
ATGATCACTCCCAGTAGAAAGAAGAAAg Run BLAST on NCBI transcript from alignment at sc0000025:271991..272963- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00003157 ID=TCONS_00003157|Name=TCONS_00003157|organism=Clytia hemisphaerica|type=transcript|length=973bp|location=Sequence derived from alignment at sc0000025:271991..272963- (Clytia hemisphaerica)
AAAATATCTTTATAAAAGTATTAAAGGGATTCCTGATTCAGGATTCAAAG
ATTTAATATAAGTTAGAAAGTTGAGTAAGAACAGCAACATTTTCAGGTTT
TGCGAATATCATGTAAGCTTTTTTTTAGCGTTCCTTGAAATTGAATAGCG
TCAGGAACCCTCAAATTTAATCAACTCCTTTTTCAATGTATGTTGCTTTG
TATCATCTAGATTTGTCTTTAATTCATGATATGCACCATTGCGATGACTT
CTGGCATTACATCGCGGACCCAACAGCTGATTGGTTGCAGTTGACGTACA
ATCAGTCAATACGTCACTTACAACCAACCAGCTGTTGGGTTCGTGGAAGA
CATTGTAATGGTACATATCATGAAACCAGCACATGGCATTATAGGGTTCT
TTTTGGTGTAAGAACTTCACCTACTACATCAACATAAAAACAACCATTTG
CGTGTGTCAGTTGTATATGCACATTTAATTTTTGTCACATATTGATATCG
ACTTGCAGAATCATTTCTTTGAAATTTTCGCTGATGTTGCGTCATTTCCA
ATTCTTTCAAATTATTCTCACCGACTTTTCCACTTACTGCTACTTCATAT
AACTGCAAGTGAAGCATAAATAACATATCACAGAGTAATCCAGGGATCTA
AAAACAATAGCATCCTGCTACATTTGCTGTTTTCTTTTCTAGATACCATG
ATATATACCAAATATCCTCACATCATTGAGGTATCTTTCGCAAAGCAGTT
GATGTTACACCATTCGAATACCATTTTTAGATTCTGATCCCCGAATCTAC
CGATTTCTTTTTCGATAGTTTGGATACTCTCATAAAGGAGATGACACATA
AGATAGCCGCTATGACATGGAACACTACTGTGATCCAGGCTACGTAATAT
GTGGTACTTGGGCTAATGATGTCTGAAAATCCTTTGGCTGTGTAGATGAT
CACTCCCAGTAGAAAGAAGAAAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00003157-exon-sc0000025-1575043694:272727..272963 | TCONS_00003157-exon-sc0000025-1575043694:272727..272963 | Clytia hemisphaerica | exon |
| TCONS_00003157-exon-sc0000025-1575043694:271991..272581 | TCONS_00003157-exon-sc0000025-1575043694:271991..272581 | Clytia hemisphaerica | exon |
| TCONS_00003157-exon-sc0000025-1510915933:272727..272963 | TCONS_00003157-exon-sc0000025-1510915933:272727..272963 | Clytia hemisphaerica | exon |
| TCONS_00003157-exon-sc0000025-1510915933:271991..272581 | TCONS_00003157-exon-sc0000025-1510915933:271991..272581 | Clytia hemisphaerica | exon |
| TCONS_00003157-exon-sc0000025-1491911889:272727..272963 | TCONS_00003157-exon-sc0000025-1491911889:272727..272963 | Clytia hemisphaerica | exon |
| TCONS_00003157-exon-sc0000025-1491911889:271991..272581 | TCONS_00003157-exon-sc0000025-1491911889:271991..272581 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000025 | supercontig | sc0000025:271991..272963 - |
Blast
The following BLAST results are available for this feature:
|
