TCONS_00003124 (transcript) - C. hemisphaerica

Overview
NameTCONS_00003124
Unique NameTCONS_00003124
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1247

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00003124 ID=TCONS_00003124|Name=TCONS_00003124|organism=Clytia hemisphaerica|type=transcript|length=1247bp
CTTAGAGCTAACAGTGTGCGTTCAAAATGAAGAAGTTTCTAGGTGTCTAT
AATCATAAAGACAAACGCAAAACAGTTAAAATAGGCCACGAACAATACTC
CGAGTACACGACCACGCATACTACgacaaaaaagaagaacagtTTCAAGC
TATCCATGCCAAATATACAATGCCCGCAGGATACAAGTGAAGCCATCCGA
CAAAGACCAGCATTAAATCGAACGAAATCGGAAGATAGTCAAACGAGTGG
TATTGATATGCGAATCTCAGAACAAGATCTCGGCTCGGATGCCGAAAGTT
TACCGTCTTGCGAAGAAAGCTTAACGAATTCCGAAAATAGTCCACCGAAC
AGCCCCGAACTTTTTAAACAGAAACAAGAAGTTAGCCGACGTGAATCTGC
TCCTGCGAGTTTCAATATCAAGATTTTAGACGACATACAAGGTTTGAATG
AAATTAATGAGGAAAGATCGAGAGAATTTCATCGACGATATAGTTCAGTC
GAGGAACGAACAAGTCGTGTTCGATTTAATCTCGAGGAATCTtttaaaga
agaagaagaccATTATAGTAAacaatttgatgaaaatgaagagCAGCCAA
AATTTTCGGACATTGAAGGGTATAAGGTTGCTCCTTTAACTCAATATCCA
CGCAAAGTTTCAAGTCCTCCTTGTTTGTCATGTGATATCGAGGAAGTGCG
ACAAGAATATCAACAGAACCAGCAAGTACCGACAGCACAACGAAAAGACT
CGTCGGACCGTTCTCGTAAATGTTCGGTATACTCTGATAATTCAGGATCT
ATTCAGATTCTTCCAGGACAATCTGTACGAAAAGTTTCGTCGCAAGAAAA
TTTAATTCGCGAAGAAGAAGAGTCGACGCCTATTGCACCTTTACGAAATA
AATATGATCGTAAAATAAGTTTACAGGAACCTAAATTACGGAAAGACTCA
CGTGTTGATAATCGTAAGTTGAGTCTCCAAGAGAACTCTAGCCGACGAAA
ATCGGTATGTATTGACGAGAAATCTACAAACGAAAACTCACGAAAATTTA
GTTTACAAATACCTCGAAGACGCCCCAGTTTTTCAGATCGTAAATTAAGC
TTACAAGAACGTAAAAACTCAACACACGAGCGTAAAATGTCATCGCACNT
TGTCTCTTAAgcttttggtttgtttttgtggaatttaaTCTGTATTGATG
GGGTattaagatttttgtaaggGCCCAGTCATAGTTTTCGGATATTC
Run BLAST on NCBI

transcript from alignment at sc0000025:761912..772675+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00003124 ID=TCONS_00003124|Name=TCONS_00003124|organism=Clytia hemisphaerica|type=transcript|length=10764bp|location=Sequence derived from alignment at sc0000025:761912..772675+ (Clytia hemisphaerica)
CTTAGAGCTAACAGTGTGCGTTCAAAATGAAGAAGTTTCTAGGTGTCTAT
AATCATAAAGACAAACGCAAAACAGTTAAAATAGGTAAGACCGTTCATCA
ttgagtttgttttttaatataCCATCCATCTTGGATTTTTTTGGCTTGTA
TAGGAGGGCTATCAATGTACAACTGAAGAGAAGTTTAGAATATATGCTAT
TAGAATAAGCATCCTAGTTGCTACGTGCGCAGTAACAAATACTGATCTAT
AACCATCGCCAGTTTCTGCTGAGAAAACTCGCATTAATTGGTCAAGATTG
ACAAGATTGTTAGATAGTACTTGCTAATTCTTCAAAAGAAGTGGTCTCTT
CACCTGTTTTGACGCTTTCACGAAGAAATGCTAATCTTTGGAAAGCATCA
GGTGGTATTTGACTTGAagttgaaaaacttttcaaacgCAAAACTGTAGT
TTTGAGATTCCATTGTGGTTTATAGTGCAGTacatgattttgtttttttg
aaattcaaaatatcttaTTTGTAGTGACTATTTAAATACCGTTATTTTCG
GATGTCTAATTAAAAGTATTTTCCAGACTGTCCGTGACTGGAGACAGAAG
GCTTTGAGTTTCGATCCTGACAAAGGTTGGGAGAGACAAAGGGAAGATTA
TACTTTACAATAAAAGATCTTCCATCATCTTCATGTTAAACTTCCCCATC
ACTGATATTTAACAAAGTTGAATGAATCTGTTTTTTTCGCATGAGGATGT
TGTAAAAAGAATCTGAAGAAATCTGTCCATTCTTTTTGTTGTAGATAAGG
ATGTTTACGGTTTGTCGGGAATCGTTGCCGTTGACGTTTGTCGGTCTTGC
AAAAAACCTTTCGCTGACTTATTGTATTAAAAGTAGTATCAGCATAATTT
GTCTACATTTGTCTCGTGTANTTATTGTATTAAAAGTAGTATCAGCATAA
TTTGTCTACGTTTGTCTCGTGTATCAATATCCTAACAACGAGCTCATCCA
ATCAAATCTAACACGTTTCTACCCAAAATAGCATAATTCTACTGACTGCA
TTTTGCTGTGTCAACAATTCTGGGTTCTAGCTTTTCCCATACCCATAGCC
TTATACAGAAGACAGTTTTGACAGCTAAGATGAAAAATACAGAACTAATA
GCACAACTACAGACAAGCTATCACTGTGGTTTACAAGTTCACCGTTAAAG
TTAACGAGTTCTAAAACACATTTATGGTGAGACCTTTCAAATTTGACAAT
GCAGCCGCAGTCTAAAAAAGCCATTACCTAAGACAacttaaaatagaaaa
tgacctATAGCAAGTCTTGACACATTTACAGTTAAATTTAGTTAAAGTGT
TTCACTGTCGCCAATGTAAGGTCGATTTTATCTAGATTCtttgcgaaaat
tagtttccaaTTATCCATTTTCTGACACAGTTTATCaattaaaactttgt
tttaaaaaCCACTTTAATGTCATCTGAAAGTGTCACGTACATTTTTAAGC
GGCTCTTGCGGATTTTTTCCCTCTCTCATTCGCTTCACTtgtatttcttc
tttttgtgaAACGTTTAGGATATGATATGTTTCTTCCCAATGACTAATCA
GTTTGATGGACCAGATTAAGTTTTGATTTCCTTGATATGTGTCCGTTTAA
GCTTCGATCAAATCATTCTTGGCATTTACGCACGGGTTTTTTAGTTATAG
TGTCTGTAGTAAGAAAATCCTCTCGCTTTAGCCTTCTTCTGGGCTGATGT
AGATGCCCTTTCCTCGATATTTTATTGTTGAATGGCCTGAAGAAATTATA
TACTTTATTTTGTAACCTAACTTAGTTGGATGAAAGGTGTCAGACAATGG
AATTAGTTTCAACTCTCATCTGAAAGAGAAACATATActtcgtccccgtg
tatcccagaaTTTATTTACGTTAGTGATGGACGTCAGAATAAGCATCAAA
AAACCGAAATGCTTCGAACGAGGTTTAGGTTTTGCATTattggtttcaaa
aaaatattctttctaACAACGCATGAAGTAAAGGAAATAGCGTATCCTGA
AAACGCGCGTCCAAGTTTTCTGATATTTTTAGTTTCATGATTTGTTGTTT
AAAGGAGGTAATATATTGTGATCATAGCATCATTCAATTACATGAgaaag
agaaatatttttttcatatgaAACGGAATCATACTATTTTTCCGGCTCTT
TTATCCGGCCATTGGTTGGCAAACCAGAAATCATCATAACTTTAATGACT
TACCAACATATACGGTATGTGAAGAAAGGTAGGAGAAGGATTGTTGGGTT
Tctaaattataagaactttcttgttttaaaaaactatgagaatcaaaaaa
tattatttttgtccTATCACAATTATGACTTTAGTTTGGTAAactctttt
taaaatttatctacCGTCCAATGATTCAAAATAATCAGTTGGTCCGAAAT
TGTACTGTAAAAGAACGTTTTTAGTCATAGCATTACATAGAGGACCCTAA
TTCCAAGATCATAGTTTTGCTACGAATAAATAACCACTCATTgccttaaa
aatgttttactttGGTGTTTGCCAGGTAAAATTTTATATAAGAAatgtac
tttttttaaaaagaaatccatAAGTTTCTTATAACGAATGTTTGCAAAAC
GCGAACAAAAGAACCGGTAACGGCGATAATGAAACGAGAAGTTCACAAAC
AAAAGTCAGTTATTGTTTTCATTGTTCGACGAATGCCAAATATGGTATTT
GTTTATATTGACGTCaacaaaaaagtcttttttaattgGCTGACGAGTCT
TTGTGTTGTTTTTTCGTTTCATTCGGTCATTTGATATACTTTGTACCTGA
GTTGAGTGATTCTTAATCAGCGCTAGTTTGTGggttaattttgtttttcc
agCAAAGACAAAAGAACTCACTTATACTTTGTAAAAGCAGCAAACACTTA
TTTGAAACTCATGTAATAAAAGTTCAAACCAGTTGAATTTGGATGAACTG
AAAAATTAGAGAAACTATTcgtaatttgaaatttaaagacaagttgaaaa
atgaagatgcgaaatttagtttttctttgCACCCATGGAACGGGTGGTGG
CGGTGGCGGAAATGGTCTGGATGATAAAAATTCAAGCTTAGGTAAATATG
GTTGGTCAGTTTTTTCAAACCTGTCATtagaattaatgaaaatttgttaC
CGGGGATAATAGTGGCAGTCTAGGGTCCAAGTATTTTCGTTCTTTATGGG
CAAAAGCAATGATAGTTTTGGAATAATGCTTTATAATATTATTCATAATA
TTAAAATTTACACTATATTTTTGTGCCGTTGCGGAGGTGTCGAAGCCTAT
AAATAGGGGTGACATTAACCACTTGTAcctttttattttgcttcaagtaC
TGTCTTTCTTACGTCTTCAACGATTATGTATATGCTTGTAGCAAAATATC
AATGTCATAATTTCTACCTTCTCATAAACAACTTGCGGTCAAAAGTGTGG
CGTCCCATTCGCAGAGGAGGGTCACCTTTCGTTTGTAGAACAATAATaaa
actgcaaaaaaaaaacgaaatcaCAAAAAGCGCTAAGATAAACATGAGAC
TACCTTATGTAAAAACAGTCCTCGTTACATTCtgacaaaaaatttgattt
tgtgtgtttttgttttgttgttagtATTAGCGTCGAGACCAGTAAAGGGC
TTCCCTGGTAGAAAATCTTGATAAGATCTTACCAAGATCTTTTAAAGAAA
CTTGGCAAGAACTTTGTAGGTTTCTTCTCAAGATCTGTGCAAAGAACTTT
AAAGATCTTGACAAGATCTTGACACAATCGTTTaggatctttaaagatct
ttaagGATTCTTGAAGGTTTAAGATCTTTCAAGAATCGTATTCAAAAATA
TACACACCCAAAAGATAAATCTGCTAAATTTTCTCCTTTCAACTAATAAA
GAAATCATAAGATTCTTAGACCTGAATATTAATGGTTCCTAAATTTTAGA
ACATTTGCCTCGACTTTGACGATTACAAGATCTCAAAACAGATACACATG
AGATTTTTTAACTTCAAATCAGTCtaactgacgagttaggctCACTGTCT
AGATCGCTATTTATCCGGGCATACAGGAAAACTGGgagccgggaggcggg
aggctgaaccgggagccgggagNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNggcgggag
gcgggaggctgaaaacgaaagtgggaggcgggaggctaaaatcgaaagtg
ggaggcgggaggctgaaaatgaaagtgggaggcgggaggctaaaatcgaa
aggGGGAaacgggaggctgaaaacgaaagtgggaggcgggatgctaaaat
tgaaagtgggaggcgggaggctgaaaacaaaagtgggaggcgggaggctg
aaaacaaaagtgagagGCTCATTTATGAGGCCACGCACAAACGTTTTTGG
TAACGTAACTATTATATACTATTGTAACTATTCAAGGGATAGGTAACAAA
GAGCTAAGAAAAATcagatcatttattttttataaacacacacaatccat
caaaaaaactatttcaaatagTATGTTAATTGAAACCAATTGTTTTCCTA
GGAAGCGtttctctttataaaaataattttacataaaaatataGCAAGCT
TTGTTTCGAAACTGCTGATGCaagatttaattacaaaaaaatataacatg
acAGTTTTCGAGTGTTATATATATTTAGTGCAATCGGCTCTTGCATGttg
gaaataatctaaaatcatttctttaaAAAGTCAATAATTATACAAGTCAT
GGTGAAATAAAGGTTGAATTATAATCATTGTTCACTTCAATTGATATCAC
CTGAGTGGCCGAGTGGATAAGTCGATGAAACGGCAACTCATCTTTGGTGG
TTTTAgagagttcgaatcctatacggtgtgacgaaaattgtgttattttg
tctgttttgtcaaCATTGATCAAACATTTcctggttttatgagctcttgt
tgatatttttgaaacttttNattttgtctgttttgtcaacattgatcaaa
ctttttctggttttatgagctcttgttgatatttttgaaactttttgtta
aaattttaagaaacaaattggggggagggggcagtcaggcaaattgaccg
acgccgCGACGGGTTACCTGCgacggttaagggtatgttttccaatttat
cagaaatgcactgtaagggtggaaatttcagcaaatctatgGGAATAATT
ATTGCTCAAAAAATCTTGATTgctcgaaaatcttgattttttttgctcta
aaagatttgaaaaaatgcattgaaagggtatgaatttttttctgcactat
aagggtgcgattctaaatgCCAATTTTTTTGCCGCACATACTGTCAATTG
GTAAACCCCCACCCCCGGGAGTGTCACCTCAGCTTAATGCAGTTTGATTC
AAGTatagtatttcaaaatggatcaggttggttggcgggtggagagtcaa
gagtcaagagttatgactttcccttctcttgaaaatccaatgttccaaaa
ctttcaactaaaaaaaatgcaaaaaaatcggcttttatctttttttatta
tcttataaacacttttttcagaaccacaagtgaaaagaaaagccAAACTG
ACTGAATATGCTGCCAAAAaagtgattgacaggtctagaaaatgattgac
aggcccGGGTTAGATATTTCCGTNgtgagcaatctcgttatatttataaa
taaaccagctgtgctggaaggtcagcccgaaATTATAAGAAAGATTAGAA
GATAAGAAGATTAAGATATTTAATTCAAGGAAAActagttgaaaaaaaat
tagttatcgcgtattttccaaggaaaattagttatcgcgtattatccaag
gaaaattagttattgcgtattatccaaggaaaattagttgttgcgtatta
tccaaggaaaattagttatcgcgtattatccaaggaaaattagttattgc
gtattctccaaggaagatcactagaccgtattttccaaggaaaatcacta
tGGTCcttattttctgaggaaaattagttcttgcgtattttccaaggaaa
atcctttgttccgttctttccaaggaaaatcaattttcacgtatttttca
agaaaaattaatCATTACATACTTTCCAAGGAAAGTCAATTGCTATAGCT
AATTTCCAAAGGAAATCATTTGTGTCGTATtgtccaaggaaaatcacagc
acTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNaaagt
ctctcaaagggtcccaaaatcatcaaaattttatctCTCAAAGgggcgat
tttcgatttttgctttggacatacctgtcacctcgcaaacctagtactgT
TTGACACtctgtttttatctttttgaagGCGTTTTCAAGCTCAGAAAATT
ATGGTCGGTACCTCAAGACTTGAGGACCGTTATAAAGCCAGGgagtgctt
gaaaaatcaattNNNNNTTGACAttctgtttttatctttttgaagGCGTT
TTCAAGCTCAGAAAATTATGGTCGGTACCTCAAGACTTGAGGACCGTTAT
AAAGCCAGGgagtgcttgaaaaatcaatttttttgattaggtctgaaata
tttttgatccctgtggatagatgcgtttagaaaagaaaaaaaatacacat
GGGGGAATGGAACCCTGGACTATCTGGCTTTGAAACTGTTGCTCTACCTA
CTGAGTTAATTGGACGAATGTGCAACGTTTTTGAACGGAAACGGATGATG
GAAAGAGCCGATTTGAAAGCTCAGCGGGCTGACCAAAAAGTAATATACTT
GTGGAAAGCCCAATTATTCTACTTTTTCGAATGCTGTgtcatggaatttt
tttaaacaattaaaTAGAACGGGGTCTCCTCTGATGTAAACAAACCTCGA
GTCCTATCCTGAAAATTGACATTGagcgtagaaaaaaagacaaatgaaag
tattttcctttttaattcatATTTCCAATAATTAAAGACTAACTTGAAAA
CACCAAGAGTGAAATGTAGCTAAATAATTGGAACGCCTTgcgacttagaa
tttttttgcaaaactgaaaatttgaccccggctcgaactaCTACCAAAGT
CTCTTGACTCTGATTCTGAGTCCGACACGCTAGCAATGTACTATCGAGCC
GATATAAAATTACGCAATTtaaaattccttataaaaaacactactgcaTA
TACGGGTGAACTGACCTCATGGGCTAGGCTAACTGTTTAGATCAATTACA
TACTCCAGGCTCCGTAAGGTTCCTTATTATNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNgcctcccactttcgttttc
agcctcccgcctcccactttcaatttcagcctcccgcctcccactttcgt
tttcagcctccccgcctcccgcctcccactttcgatttcagcctcccgac
tcccggctcccggttcagcctcccgcctcccggctcCCAGTTTTCCTGTA
TGCCTTTATCCGGTATTATACTCCACCCCATTGTATTCTTCGCCCTTACT
TGTCAGCGCTAAATTACTCATTGTGGTGTATACAATATAGGCTCTGTTGT
GTAGCAATCTACTAATttgccgtaattctacagatgtctgtagaaatatg
aaatctacatattttgtagaataatAATTCGACCCTATATACCCTATTTG
TATGGTTGTatgtaaatttgatatttaaattctttaaaaaaagtcaaaat
cgaAGATTTTATCATAACCACAAATTTACGTGTTATTGTGTTTATTCAAC
AAGATTCTTAACCcgaactttataagaaacactaAGAATCTTAAAGTTTC
TTTGCATATTTGTCTattaagatttggaaagtctctttataagaacttga
taagaaacgctaagaatcttaaaatattttatggTTGCAAGATTTCATAA
GATTTCATAAGATTCTTCTANNTAAGATCTTACAAAGATCTCTTAAGATT
CTTACTtgttaaagatctttaaagatctttaacgatcttttcagatctta
tcaagaatttttaccagggtTTGAGGGTGAATTCTTTGTTCGTACGAGTT
TTAACTTGGTAATTGTCCCTTGTCCGATTTTGCTGGCTTTAGTGTGTCTA
TGcttgctttttttatttttggacaatttcaaaatttctcttcaacaatt
tatTCATTTTGCATTAAGCTTGTTAACATGCAATTTTCAAAATGCTGTTA
CTTTTATTGTTGATTAGCAGTGTTAAGAGAATTGACAGCAATTTATCATT
GCCAAAGTTAATTAACTGAATGTACAACAacgaaaaattaatgaaatgaG
TTTGTTAGTATTGCGGTATTAAACCAATAGGTGGTTGATTTAATTAATTC
CACTTTGATTTGATTGCGTTATCTTTATTCATTTGAATTGAGTCAAtctt
gtattttcattttctgatcTATATCGCAATTTGTTGAAATCTAATATATG
CGGTCTGTTTAGCCGAGTATTTGATTTGTGTCTGCTTGGGATGTCGTAGA
TTTATTCATGCAGCATTTTTGTAACTTTATAAATTTACTTTTCTTTGTCA
GGCCACGAACAATACTCCGAGTACACGACCACGCATACTACgacaaaaaa
gaagaacagtTTCAAGCTATCCATGCCAAATATACAATGCCCGCAGGATA
CAAGTGAAGCCATCCGACAAAGACCAGCATTAAATCGAACGAAATCGGAA
GATAGTCAAACGAGTGGTATTGATATGCGAATCTCAGAACAAGATCTCGG
CTCGGATGCCGAAAGTTTACCGTCTTGCGAAGAAAGCTTAACGAATTCCG
AAAATAGTCCACCGAACAGCCCCGAACTTTTTAAACAGAAACAAGAAGTT
AGCCGACGTGAATCTGCTCCTGCGAGTTTCAATATCAAGATTTTAGACGA
CATACAAGGTTTGAATGAAATTAATGAGGAAAGATCGAGAGAATTTCATC
GACGATATAGTTCAGTCGAGGAACGAACAAGTCGTGTTCGATTTAATCTC
GAGGAATCTtttaaagaagaagaagaccATTATAGTAAacaatttgatga
aaatgaagagCAGCCAAAATTTTCGGACATTGAAGGGTATAAGGTTGCTC
CTTTAACTCAATATCCACGCAAAGTTTCAAGTCCTCCTTGTTTGTCATGT
GATATCGAGGAAGTGCGACAAGAATATCAACAGAACCAGCAAGTACCGAC
AGCACAACGAAAAGACTCGTCGGACCGTTCTCGTAAATGTTCGGTATACT
CTGATAATTCAGGATCTATTCAGATTCTTCCAGGACAATCTGTACGAAAA
GTTTCGTCGCAAGAAAATTTAATTCGCGAAGAAGAAGAGTCGACGCCTAT
TGCACCTTTACGAAATAAATATGATCGTAAAATAAGTTTACAGGAACCTA
AATTACGGAAAGACTCACGTGTTGATAATCGTAAGTTGAGTCTCCAAGAG
AACTCTAGCCGACGAAAATCGGTATGTATTGACGAGAAATCTACAAACGA
AAACTCACGAAAATTTAGTTTACAAATACCTCGAAGACGCCCCAGTTTTT
CAGATCGTAAATTAAGCTTACAAGAACGTAAAAACTCAACACACGAGCGT
AAAATGTCATCGCACNTTGTCTCTTAAgcttttggtttgtttttgtggaa
tttaaTCTGTATTGATGGGGTattaagatttttgtaaggGCCCAGTCATA
GTTTTCGGATATTC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_001734XLOC_001734Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00003124-exon-sc0000025-1491911889:761912..761995TCONS_00003124-exon-sc0000025-1491911889:761912..761995Clytia hemisphaericaexon
TCONS_00003124-exon-sc0000025-1510915933:761912..761995TCONS_00003124-exon-sc0000025-1510915933:761912..761995Clytia hemisphaericaexon
TCONS_00003124-exon-sc0000025-1575043694:761912..761995TCONS_00003124-exon-sc0000025-1575043694:761912..761995Clytia hemisphaericaexon
TCONS_00003124-exon-sc0000025-1491911889:771513..772675TCONS_00003124-exon-sc0000025-1491911889:771513..772675Clytia hemisphaericaexon
TCONS_00003124-exon-sc0000025-1510915933:771513..772675TCONS_00003124-exon-sc0000025-1510915933:771513..772675Clytia hemisphaericaexon
TCONS_00003124-exon-sc0000025-1575043694:771513..772675TCONS_00003124-exon-sc0000025-1575043694:771513..772675Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000025supercontigsc0000025:761912..772675 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.203112	0	0	0	5.49605	0.910336	6.51441	0.00113639	0	0.00029639	9.55598e-10	0	0	0	4.62943e-05	0	0.703233	0	0	0	2.1912	0	0.677795	0	0	2.71906e-08	0.764445	0	0.877171	1.84023e-08
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00003124 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
back to top