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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00003115 ID=TCONS_00003115|Name=TCONS_00003115|organism=Clytia hemisphaerica|type=transcript|length=228bp
GACGCAAAGTGGTAACAAGTGATAGATCAACAGAGTGATCAGAAATCGCG
TGTTGGGATGGAGATAGACTACTGATAACCCagcataggcggttttagac
catgcCAAACATATCAGAGGAAGAgGTCTAATCAAACATATGGTGACTGA
TTACAATGCTATAGAAGCTATCATGAAGCAAGGGAATGAGCTAAGAACAA
CTGCTTCGACTAACATGAACGATACCAG Run BLAST on NCBI transcript from alignment at sc0000025:695978..696909+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00003115 ID=TCONS_00003115|Name=TCONS_00003115|organism=Clytia hemisphaerica|type=transcript|length=932bp|location=Sequence derived from alignment at sc0000025:695978..696909+ (Clytia hemisphaerica)
GACGCAAAGTGGTAACAAGTGATAGATCAACAGAGTGATCAGAAATCGCG
TGTTGGGATGGAGATAGACTACTGATAACCCagcataggcggttttagac
catgcCAAACATATCAGAGGAAGAggtttgtaattgtaatttcctTATCT
TTTAATGAGCGTTGCACTTCTTCGTATGATCCTgtcgtacttgctctatt
gtcttaatcTCAACACTTTACTATGCTCATGGATACTCTGTAAAGAGAGA
GCAATTTAAGTTTTGatataaataaaaatcatttAACCATACGTGCAAGG
TAAGAAGAGACAAAGGTGTCTAGAATTTTATCAtgtcaaaatttcattca
tttttgcgAGAACATCTGGAGATTTCCATGCTTGTTATTAGCACAGTTTT
ATGAATACAAATCACCCTCTACAAAACTAATCACTTTTCATAGGTCTAAT
CAAACATATGGTGACTGATTACAATGCTATAGAAGCTATCATGAAGCAAG
GGAATGAGCTAAGGTATGATAGCTTATAAACTAATTTAGTTTCGAATCTA
TGGAGCATTTAGAAATAATCTGCAACCTTTCTATGGAAAGTAGcgaaatt
ttcttcacttttttaagAAGCatcttaaaattcaaaagcAAAATATTGCA
TGAAAAGTTTGAAGGCATTATCactgtttttgatatttttgagaagaaaa
tatgctcaaaaaacaattataaagatttttgttttggtgGGGGCCAAGAC
TCTACACAATACCTGGAGATCTGACAAGATAATTTGCACGATTTTGTTAT
AAAGATTCAATCTAAAAATTGTGCTTTGTTGAAGGCTAGTTGTATTTAGT
AACTATTTGATGAGACATGATTCTCTTATCTCACATAACTCTCTAATAGA
ACAACTGCTTCGACTAACATGAACGATACCAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00003115-exon-sc0000025-1491911889:695978..696102 | TCONS_00003115-exon-sc0000025-1491911889:695978..696102 | Clytia hemisphaerica | exon |
| TCONS_00003115-exon-sc0000025-1510915933:695978..696102 | TCONS_00003115-exon-sc0000025-1510915933:695978..696102 | Clytia hemisphaerica | exon |
| TCONS_00003115-exon-sc0000025-1575043694:695978..696102 | TCONS_00003115-exon-sc0000025-1575043694:695978..696102 | Clytia hemisphaerica | exon |
| TCONS_00003115-exon-sc0000025-1491911889:696421..696490 | TCONS_00003115-exon-sc0000025-1491911889:696421..696490 | Clytia hemisphaerica | exon |
| TCONS_00003115-exon-sc0000025-1510915933:696421..696490 | TCONS_00003115-exon-sc0000025-1510915933:696421..696490 | Clytia hemisphaerica | exon |
| TCONS_00003115-exon-sc0000025-1575043694:696421..696490 | TCONS_00003115-exon-sc0000025-1575043694:696421..696490 | Clytia hemisphaerica | exon |
| TCONS_00003115-exon-sc0000025-1491911889:696877..696909 | TCONS_00003115-exon-sc0000025-1491911889:696877..696909 | Clytia hemisphaerica | exon |
| TCONS_00003115-exon-sc0000025-1510915933:696877..696909 | TCONS_00003115-exon-sc0000025-1510915933:696877..696909 | Clytia hemisphaerica | exon |
| TCONS_00003115-exon-sc0000025-1575043694:696877..696909 | TCONS_00003115-exon-sc0000025-1575043694:696877..696909 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000025 | supercontig | sc0000025:695978..696909 + |
Blast
The following BLAST results are available for this feature:
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