TCONS_00003107 (transcript) - C. hemisphaerica

Overview
NameTCONS_00003107
Unique NameTCONS_00003107
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length3176

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00003107 ID=TCONS_00003107|Name=TCONS_00003107|organism=Clytia hemisphaerica|type=transcript|length=3176bp
TCCCGAGACGACATCAAGTTGATTGATATATACAGTTTATACAGAGGGAA
GTTGAAGGGTCATTTTGAACTGAAAAACGAGGAGATAGAAGTGTGAGAAA
TTTGGCAGTGTTCAACGTACCATGTTTGAGTATTGGTTACGAGTGACCTC
AGCTTATCGATTATTTGTCAAAGATGCTTTACTTCATGTTCTGCATGATG
AAGATATCGGAGGATTTCCAAAAGATGAGGAACTAGTCTATGCTATATTG
CAAAAATTtcgagaagaagaagaaactaGGCTAAGTAATGTGATTACCAA
AACACAATGGGATACTATTTGTCACGTGTGCAATGCTGAATGCGAGGAGT
CGTGTCAACAACAAGGCGTGTGCCGAACAAAGACGTTAGACGTTCCTACT
ATTATAGCACTTATTATCGGTATGACGGAACTGGATCCTCCTAAAGGAAG
TCGAGGTTGGAGCCAGATGTTGCCGAAGCTAGGAGATGGGAGTCGAGGAG
CCGCTGTTTTGTTAGCTAAACAACTACACGCTAAAATGAAAGTAATGAGC
GTACGAGATATTAAAAACGAAGAACAGTTTGATGATTTATGGGATGAAAT
TGAGATTATTTTAAACGGCTTGAACTACAGGAATCTTCAGGTAttccaga
aaatgaaaacagGTCGTATTAGTAAATACTACAAAGTTGTTTTCCAAGTT
CTAGTCGATAAATACGAAAAAACTTGCaatgaaaaacagaagaaaatcTC
TCGGCTTGAATTTGAGACTTTGAAAGAAGGACTTGAGGCTTATTTAGAGT
CCATGGACCAATCATCCTTAGGAGAGTCCGCTTTTGGGGTCATATCCCAA
ATGGCCGAATATCAGAGCCAGATTGATGAACGACTGGAGGAGATAGAACA
GCAACAGATGCAAGAGAATCAGTCAGAATCGTTACCGGCAAATTTGAATG
AGGATAATGAGCAGTTATTAAGATGTGTCGTCGAGGGAATGAAATTacac
atctctgaaaatttagCCGACGAAAATAGTATCTTGCAACAATCGAAGGA
CCTGAAAGAAGCCAGCAAAGTGCGTTTCCAGATGGCTGTTGACACATGTG
GAAATGGTAGAATCAAAGCCACCACTATGAAACCTATCCTAACTATCGTC
ACTGAAGATTATTATGCCAAAACGTACAATGAAACGTCTAGTTTCCTACC
CAGTGTGCGGGATCTGGTGGCTCGACAAAAGAAGTTTATCCCGTTCGAAA
ATAAGATCATGACGTTAGAGAATCTGATTAAAACACCTTCAGAATGCTTG
ATTTTAATTGGACAAGAAGGTATTGGTAAATCGACCCTCATTGATACTAT
TTTATATCAATGGGGTTGTGATCAGCTCTGGGGAAGCTCGTCGAAGTTCG
agtttaattttgtatttgttTTACATTTCCGACAGTTGACTCGCTTTCAG
AACCAACCTGGCATCACAGCTGAGGAGATTCTAGAACATTTCTATCCCAA
TTTACCATTAGACTTGCTAATTACGATTCAATCAGAGATTAATTGTCTAT
TGGTTTTGGATGGATTCGATCAATATTCTTCTTTGGATGAGTTTAAAAAG
TCCAGTGAAGAACCTTCGTCATTCGTCAAAGCTGTTTTCGATTTACTGAA
TCCAAGAAGTGAGAAAATCCCTTTCACAAGGATCATCACAACACACCCAG
ATTATCTTCAAACGTTAGCTTCAGTCTCCTTAATACCAGCACAAGAAAAG
AATGATAAAATTTCCTTAAAAGTTGTGGAGTTGGGTGGATTGAGCTTCAA
ATCGGTTAACAATTATCTAACAGATTATTTAAAAGATGACACACCTCCTA
AAGAGGTGATCGATGCAGTAAAATCTAATAAGGTTTTGTATGACTTAATG
ATTGTACCATCAATCTGTCAAGGAATGTGTGAACTCATTGATAATAAACT
GTTAACGGATGAAAACCTTCCCCAAGATAATACGACCATGTTCACACTAA
TGTTCATATGCCGCCTCTGGAAACGCCAATTCAAAGAAGCGTCAACCCTG
AACGGGATGTTTATAAAACCATCATTCAAAGAGTCTTGCATTAACTTAGC
AACGGCTGTGTTTCACTTGGAAACTAGTAAGATGGTAGATTTTCAGCTGG
AAGACTTGCCAGTGGAATCGAACATTGAGACTTTATTGGAGGCTGGTTTT
ATCATTAAACTAAACAATAACATTGATAAACCTTATTCATTCAGTTATCA
ATTCTTACATcgtatttttaaagatttcctaTTGGCTTTATACGTTTTTT
CGAATGGATTCACGAAAGAATCTAAAACTATTATGAATAAGAACATACTG
GTTATTCTTGGAGCATTTGCCGGTGCTTCAGTACCAAATTCAACTTCTGA
CCCACACATGCAGAAATTCTGTCGACTTTTTAACAGTAATTTAACACTGG
ATGACATCTTACAATCATGTAATTGCCACGATTCAGAGAAAATTCAAACA
TTGCGCGGATTTTTGAAATCGATTAGAGACGATGATCATCATAAAAGCAA
ACAGTTAGGacaactgctgactcagcacaataaaaacaaaacagaatcaC
CGAAACGGAGTCCAAGAGATGAAAAGTATGACGTCACACCTGTAATAAAT
GCTTTGATTTTATATGAATTCGgatttcaaaactttaaagaAGTGACTCT
ATCGAAACCGGTGGCTATCGTGGGTTCCGCTCTTAAACCTTACATGGATA
ATGAACTTCGAGATATGTTGAAAGAATACATCAAACAGAAGAAAATTGTT
ATAAAGGGCAATAAGTAAATATCGAATAATTTATCTTGTCGGTCCTATTC
TAGCAAGATTCTTCGTTttattttcgttcgtcgtcgtgattttaccgatt
tacttaacttcGCTAATGTAAGCAAAATAACGCAACTAACAACCAGTTTT
CAAAAACCCTGTGAAAGGTAtcaattttggtaaaaaaaaggTTGATGTTG
ATGTTTATGGACTTAAACCTTAACTATAAATTTGATTTGGAATTCTAAAT
TACTAAGAAAACATGAACGTTAAACACGGCGAATGTCAATTTCTCACTTG
GAAACCATTTTGTTGAGTTAGTTACACAAaaacaaccccttctcacagcc
ccggtaggatttaaataacggaccaa
Run BLAST on NCBI

protein sequence of TCONS_00003107-protein

>TCONS_00003107-protein ID=TCONS_00003107-protein|Name=TCONS_00003107-protein|organism=Clytia hemisphaerica|type=polypeptide|length=898bp
MFEYWLRVTSAYRLFVKDALLHVLHDEDIGGFPKDEELVYAILQKFREEE
ETRLSNVITKTQWDTICHVCNAECEESCQQQGVCRTKTLDVPTIIALIIG
MTELDPPKGSRGWSQMLPKLGDGSRGAAVLLAKQLHAKMKVMSVRDIKNE
EQFDDLWDEIEIILNGLNYRNLQVFQKMKTGRISKYYKVVFQVLVDKYEK
TCNEKQKKISRLEFETLKEGLEAYLESMDQSSLGESAFGVISQMAEYQSQ
IDERLEEIEQQQMQENQSESLPANLNEDNEQLLRCVVEGMKLHISENLAD
ENSILQQSKDLKEASKVRFQMAVDTCGNGRIKATTMKPILTIVTEDYYAK
TYNETSSFLPSVRDLVARQKKFIPFENKIMTLENLIKTPSECLILIGQEG
IGKSTLIDTILYQWGCDQLWGSSSKFEFNFVFVLHFRQLTRFQNQPGITA
EEILEHFYPNLPLDLLITIQSEINCLLVLDGFDQYSSLDEFKKSSEEPSS
FVKAVFDLLNPRSEKIPFTRIITTHPDYLQTLASVSLIPAQEKNDKISLK
VVELGGLSFKSVNNYLTDYLKDDTPPKEVIDAVKSNKVLYDLMIVPSICQ
GMCELIDNKLLTDENLPQDNTTMFTLMFICRLWKRQFKEASTLNGMFIKP
SFKESCINLATAVFHLETSKMVDFQLEDLPVESNIETLLEAGFIIKLNNN
IDKPYSFSYQFLHRIFKDFLLALYVFSNGFTKESKTIMNKNILVILGAFA
GASVPNSTSDPHMQKFCRLFNSNLTLDDILQSCNCHDSEKIQTLRGFLKS
IRDDDHHKSKQLGQLLTQHNKNKTESPKRSPRDEKYDVTPVINALILYEF
GFQNFKEVTLSKPVAIVGSALKPYMDNELRDMLKEYIKQKKIVIKGNK
Run BLAST on NCBI

transcript from alignment at sc0000025:567476..571101+

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00003107 ID=TCONS_00003107|Name=TCONS_00003107|organism=Clytia hemisphaerica|type=transcript|length=3626bp|location=Sequence derived from alignment at sc0000025:567476..571101+ (Clytia hemisphaerica)
TCCCGAGACGACATCAAGTTGATTGATATATACAGTTTATACAGAGGGAA GTTGAAGGGTCATTTTGAACTGAAAAACGAGGAGATAGAAGTGTGAGAAA TTTGGCAGTGTTCAACGTACCATGTTTGAGTATTGGTTACGAGTGACCTC AGCTTATCGATTATTTGTCAAAGATGCTTTACTTCATGTTCTGCATGATG AAGATATCGGAGGATTTCCAAAAGATGAGGAACTAGTCTATGCTATATTG CAAAAATTtcgagaagaagaagaaactaGGCTAAGTAATGTGATTACCAA AACACAATGGGATACTATTTGTCACGTGTGCAATGCTGAATGCGAGGAGT CGTGTCAACAACAAGGCGTGTGCCGAACAAAGACGTTAGACGTTCCTACT ATTATAGCACTTATTATCGGTATGACGGAACTGGATCCTCCTAAAGGAAG TCGAGGTTGGAGCCAGATGTTGCCGAAGCTAGGAGATGGGAGTCGAGGAG CCGCTGTTTTGTTAGCTAAACAACTACACGCTAAAATGAAAGTAATGAGC GTACGAGATATTAAAAACGAAGAACAGTTTGATGATTTATGGGATGAAAT TGAGATTATTTTAAACGGCTTGAACTACAGGAATCTTCAGGTAttccaga aaatgaaaacagGTCGTATTAGTAAATACTACAAAGTTGTTTTCCAAGTT CTAGTCGATAAATACGAAAAAACTTGCaatgaaaaacagaagaaaatcTC TCGGCTTGAATTTGAGACTTTGAAAGAAGGACTTGAGGCTTATTTAGAGT CCATGGACCAATCATCCTTAGGAGAGTCCGCTTTTGGGGTCATATCCCAA ATGGCCGAATATCAGAGCCAGATTGATGAACGACTGGAGGAGATAGAACA GCAACAGATGCAAGAGAATCAGTCAGAATCGTTACCGGCAAATTTGAATG AGGATAATGAGCAGTTATTAAGATGTGTCGTCGAGGGAATGAAATTacac atctctgaaaatttagCCGACGAAAATAGTGagattctaattttttttaa aggaaattatGATCAGAATCAAGATAATAAACAAGGTTTAAACAACCTTT GCGGAAAAAATTCCCTCACATCTTTGCCAATTAATGCATTTGCGAAAAAt gtggtcaaaagaaaaatacaataaaaaaacacGCCATAGCATCTACGTAC ATGTGCCAAAATCCGAGCCAAAGTTGGAAAATACGTCCCTATAAGAGcct attttcccaattttcagcaaaaaaattcaaatattggTCCAAATTACAAG AATGACCTTTGAGAGACTTTAGAGAGTGTAAAACAGGGACCCTAGTGGCT CGCACATACGAAACGCCATTTTGGCTTTGTACCCCCTTCACACGCATGGT TAATTCTTTTTGATCAACAGACAGAGCTGTACGAATGGCATGTATATATT GCTTAACATTCCATCTTTTCATTCATAGGTATCTTGCAACAATCGAAGGA CCTGAAAGAAGCCAGCAAAGTGCGTTTCCAGATGGCTGTTGACACATGTG GAAATGGTAGAATCAAAGCCACCACTATGAAACCTATCCTAACTATCGTC ACTGAAGATTATTATGCCAAAACGTACAATGAAACGTCTAGTTTCCTACC CAGTGTGCGGGATCTGGTGGCTCGACAAAAGAAGTTTATCCCGTTCGAAA ATAAGATCATGACGTTAGAGAATCTGATTAAAACACCTTCAGAATGCTTG ATTTTAATTGGACAAGAAGGTATTGGTAAATCGACCCTCATTGATACTAT TTTATATCAATGGGGTTGTGATCAGCTCTGGGGAAGCTCGTCGAAGTTCG agtttaattttgtatttgttTTACATTTCCGACAGTTGACTCGCTTTCAG AACCAACCTGGCATCACAGCTGAGGAGATTCTAGAACATTTCTATCCCAA TTTACCATTAGACTTGCTAATTACGATTCAATCAGAGATTAATTGTCTAT TGGTTTTGGATGGATTCGATCAATATTCTTCTTTGGATGAGTTTAAAAAG TCCAGTGAAGAACCTTCGTCATTCGTCAAAGCTGTTTTCGATTTACTGAA TCCAAGAAGTGAGAAAATCCCTTTCACAAGGATCATCACAACACACCCAG ATTATCTTCAAACGTTAGCTTCAGTCTCCTTAATACCAGCACAAGAAAAG AATGATAAAATTTCCTTAAAAGTTGTGGAGTTGGGTGGATTGAGCTTCAA ATCGGTTAACAATTATCTAACAGATTATTTAAAAGATGACACACCTCCTA AAGAGGTGATCGATGCAGTAAAATCTAATAAGGTTTTGTATGACTTAATG ATTGTACCATCAATCTGTCAAGGAATGTGTGAACTCATTGATAATAAACT GTTAACGGATGAAAACCTTCCCCAAGATAATACGACCATGTTCACACTAA TGTTCATATGCCGCCTCTGGAAACGCCAATTCAAAGAAGCGTCAACCCTG AACGGGATGTTTATAAAACCATCATTCAAAGAGTCTTGCATTAACTTAGC AACGGCTGTGTTTCACTTGGAAACTAGTAAGATGGTAGATTTTCAGCTGG AAGACTTGCCAGTGGAATCGAACATTGAGACTTTATTGGAGGCTGGTTTT ATCATTAAACTAAACAATAACATTGATAAACCTTATTCATTCAGTTATCA ATTCTTACATcgtatttttaaagatttcctaTTGGCTTTATACGTTTTTT CGAATGGATTCACGAAAGAATCTAAAACTATTATGAATAAGAACATACTG GTTATTCTTGGAGCATTTGCCGGTGCTTCAGTACCAAATTCAACTTCTGA CCCACACATGCAGAAATTCTGTCGACTTTTTAACAGTAATTTAACACTGG ATGACATCTTACAATCATGTAATTGCCACGATTCAGAGAAAATTCAAACA TTGCGCGGATTTTTGAAATCGATTAGAGACGATGATCATCATAAAAGCAA ACAGTTAGGacaactgctgactcagcacaataaaaacaaaacagaatcaC CGAAACGGAGTCCAAGAGATGAAAAGTATGACGTCACACCTGTAATAAAT GCTTTGATTTTATATGAATTCGgatttcaaaactttaaagaAGTGACTCT ATCGAAACCGGTGGCTATCGTGGGTTCCGCTCTTAAACCTTACATGGATA ATGAACTTCGAGATATGTTGAAAGAATACATCAAACAGAAGAAAATTGTT ATAAAGGGCAATAAGTAAATATCGAATAATTTATCTTGTCGGTCCTATTC TAGCAAGATTCTTCGTTttattttcgttcgtcgtcgtgattttaccgatt tacttaacttcGCTAATGTAAGCAAAATAACGCAACTAACAACCAGTTTT CAAAAACCCTGTGAAAGGTAtcaattttggtaaaaaaaaggTTGATGTTG ATGTTTATGGACTTAAACCTTAACTATAAATTTGATTTGGAATTCTAAAT TACTAAGAAAACATGAACGTTAAACACGGCGAATGTCAATTTCTCACTTG GAAACCATTTTGTTGAGTTAGTTACACAAaaacaaccccttctcacagcc ccggtaggatttaaataacggaccaa

Coding sequence (CDS) from alignment at sc0000025:567476..571101+

>TCONS_00003107 ID=TCONS_00003107|Name=TCONS_00003107|organism=Clytia hemisphaerica|type=CDS|length=5394bp|location=Sequence derived from alignment at sc0000025:567476..571101+ (Clytia hemisphaerica)
ATGTTTGAGTATTGGTTACGAGTGACCTCAGCTTATCGATTATTTGTCAA
AGATGCTTTACTTCATGTTCTGCATGATGAAGATATCGGAGGATTTCCAA
AAGATGAGGAACTAGTCTATGCTATATTGCAAAAATTtcgagaagaagaa
gaaactaGGCTAAGTAATGTGATTACCAAAACACAATGGGATACTATTTG
TCACGTGTGCAATGCTGAATGCGAGGAGTCGTGTCAACAACAAGGCGTGT
GCCGAACAAAGACGTTAGACGTTCCTACTATTATAGCACTTATTATCGGT
ATGACGGAACTGGATCCTCCTAAAGGAAGTCGAGGTTGGAGCCAGATGTT
GCCGAAGCTAGGAGATGGGAGTCGAGGAGCCGCTGTTTTGTTAGCTAAAC
AACTACACGCTAAAATGAAAGTAATGAGCGTACGAGATATTAAAAACGAA
GAACAGTTTGATGATTTATGGGATGAAATTGAGATTATTTTAAACGGCTT
GAACTACAGGAATCTTCAGGTAttccagaaaatgaaaacagGTCGTATTA
GTAAATACTACAAAGTTGTTTTCCAAGTTCTAGTCGATAAATACGAAAAA
ACTTGCaatgaaaaacagaagaaaatcTCTCGGCTTGAATTTGAGACTTT
GAAAGAAGGACTTGAGGCTTATTTAGAGTCCATGGACCAATCATCCTTAG
GAGAGTCCGCTTTTGGGGTCATATCCCAAATGGCCGAATATCAGAGCCAG
ATTGATGAACGACTGGAGGAGATAGAACAGCAACAGATGCAAGAGAATCA
GTCAGAATCGTTACCGGCAAATTTGAATGAGGATAATGAGCAGTTATTAA
GATGTGTCGTCGAGGGAATGAAATTacacatctctgaaaatttagCCGAC
GAAAATAGTATCTTGCAACAATCGAAGGACCTGAAAGAAGCCAGCAAAGT
GCGTTTCCAGATGGCTGTTGACACATGTGGAAATGGTAGAATCAAAGCCA
CCACTATGAAACCTATCCTAACTATCGTCACTGAAGATTATTATGCCAAA
ACGTACAATGAAACGTCTAGTTTCCTACCCAGTGTGCGGGATCTGGTGGC
TCGACAAAAGAAGTTTATCCCGTTCGAAAATAAGATCATGACGTTAGAGA
ATCTGATTAAAACACCTTCAGAATGCTTGATTTTAATTGGACAAGAAGGT
ATTGGTAAATCGACCCTCATTGATACTATTTTATATCAATGGGGTTGTGA
TCAGCTCTGGGGAAGCTCGTCGAAGTTCGagtttaattttgtatttgttT
TACATTTCCGACAGTTGACTCGCTTTCAGAACCAACCTGGCATCACAGCT
GAGGAGATTCTAGAACATTTCTATCCCAATTTACCATTAGACTTGCTAAT
TACGATTCAATCAGAGATTAATTGTCTATTGGTTTTGGATGGATTCGATC
AATATTCTTCTTTGGATGAGTTTAAAAAGTCCAGTGAAGAACCTTCGTCA
TTCGTCAAAGCTGTTTTCGATTTACTGAATCCAAGAAGTGAGAAAATCCC
TTTCACAAGGATCATCACAACACACCCAGATTATCTTCAAACGTTAGCTT
CAGTCTCCTTAATACCAGCACAAGAAAAGAATGATAAAATTTCCTTAAAA
GTTGTGGAGTTGGGTGGATTGAGCTTCAAATCGGTTAACAATTATCTAAC
AGATTATTTAAAAGATGACACACCTCCTAAAGAGGTGATCGATGCAGTAA
AATCTAATAAGGTTTTGTATGACTTAATGATTGTACCATCAATCTGTCAA
GGAATGTGTGAACTCATTGATAATAAACTGTTAACGGATGAAAACCTTCC
CCAAGATAATACGACCATGTTCACACTAATGTTCATATGCCGCCTCTGGA
AACGCCAATTCAAAGAAGCGTCAACCCTGAACGGGATGTTTATAAAACCA
TCATTCAAAGAGTCTTGCATTAACTTAGCAACGGCTGTGTTTCACTTGGA
AACTAGTAAGATGGTAGATTTTCAGCTGGAAGACTTGCCAGTGGAATCGA
ACATTGAGACTTTATTGGAGGCTGGTTTTATCATTAAACTAAACAATAAC
ATTGATAAACCTTATTCATTCAGTTATCAATTCTTACATcgtatttttaa
agatttcctaTTGGCTTTATACGTTTTTTCGAATGGATTCACGAAAGAAT
CTAAAACTATTATGAATAAGAACATACTGGTTATTCTTGGAGCATTTGCC
GGTGCTTCAGTACCAAATTCAACTTCTGACCCACACATGCAGAAATTCTG
TCGACTTTTTAACAGTAATTTAACACTGGATGACATCTTACAATCATGTA
ATTGCCACGATTCAGAGAAAATTCAAACATTGCGCGGATTTTTGAAATCG
ATTAGAGACGATGATCATCATAAAAGCAAACAGTTAGGacaactgctgac
tcagcacaataaaaacaaaacagaatcaCCGAAACGGAGTCCAAGAGATG
AAAAGTATGACGTCACACCTGTAATAAATGCTTTGATTTTATATGAATTC
GgatttcaaaactttaaagaAGTGACTCTATCGAAACCGGTGGCTATCGT
GGGTTCCGCTCTTAAACCTTACATGGATAATGAACTTCGAGATATGTTGA
AAGAATACATCAAACAGAAGAAAATTGTTATAAAGGGCAATAAGTAAATG
TTTGAGTATTGGTTACGAGTGACCTCAGCTTATCGATTATTTGTCAAAGA
TGCTTTACTTCATGTTCTGCATGATGAAGATATCGGAGGATTTCCAAAAG
ATGAGGAACTAGTCTATGCTATATTGCAAAAATTtcgagaagaagaagaa
actaGGCTAAGTAATGTGATTACCAAAACACAATGGGATACTATTTGTCA
CGTGTGCAATGCTGAATGCGAGGAGTCGTGTCAACAACAAGGCGTGTGCC
GAACAAAGACGTTAGACGTTCCTACTATTATAGCACTTATTATCGGTATG
ACGGAACTGGATCCTCCTAAAGGAAGTCGAGGTTGGAGCCAGATGTTGCC
GAAGCTAGGAGATGGGAGTCGAGGAGCCGCTGTTTTGTTAGCTAAACAAC
TACACGCTAAAATGAAAGTAATGAGCGTACGAGATATTAAAAACGAAGAA
CAGTTTGATGATTTATGGGATGAAATTGAGATTATTTTAAACGGCTTGAA
CTACAGGAATCTTCAGGTAttccagaaaatgaaaacagGTCGTATTAGTA
AATACTACAAAGTTGTTTTCCAAGTTCTAGTCGATAAATACGAAAAAACT
TGCaatgaaaaacagaagaaaatcTCTCGGCTTGAATTTGAGACTTTGAA
AGAAGGACTTGAGGCTTATTTAGAGTCCATGGACCAATCATCCTTAGGAG
AGTCCGCTTTTGGGGTCATATCCCAAATGGCCGAATATCAGAGCCAGATT
GATGAACGACTGGAGGAGATAGAACAGCAACAGATGCAAGAGAATCAGTC
AGAATCGTTACCGGCAAATTTGAATGAGGATAATGAGCAGTTATTAAGAT
GTGTCGTCGAGGGAATGAAATTacacatctctgaaaatttagCCGACGAA
AATAGTATCTTGCAACAATCGAAGGACCTGAAAGAAGCCAGCAAAGTGCG
TTTCCAGATGGCTGTTGACACATGTGGAAATGGTAGAATCAAAGCCACCA
CTATGAAACCTATCCTAACTATCGTCACTGAAGATTATTATGCCAAAACG
TACAATGAAACGTCTAGTTTCCTACCCAGTGTGCGGGATCTGGTGGCTCG
ACAAAAGAAGTTTATCCCGTTCGAAAATAAGATCATGACGTTAGAGAATC
TGATTAAAACACCTTCAGAATGCTTGATTTTAATTGGACAAGAAGGTATT
GGTAAATCGACCCTCATTGATACTATTTTATATCAATGGGGTTGTGATCA
GCTCTGGGGAAGCTCGTCGAAGTTCGagtttaattttgtatttgttTTAC
ATTTCCGACAGTTGACTCGCTTTCAGAACCAACCTGGCATCACAGCTGAG
GAGATTCTAGAACATTTCTATCCCAATTTACCATTAGACTTGCTAATTAC
GATTCAATCAGAGATTAATTGTCTATTGGTTTTGGATGGATTCGATCAAT
ATTCTTCTTTGGATGAGTTTAAAAAGTCCAGTGAAGAACCTTCGTCATTC
GTCAAAGCTGTTTTCGATTTACTGAATCCAAGAAGTGAGAAAATCCCTTT
CACAAGGATCATCACAACACACCCAGATTATCTTCAAACGTTAGCTTCAG
TCTCCTTAATACCAGCACAAGAAAAGAATGATAAAATTTCCTTAAAAGTT
GTGGAGTTGGGTGGATTGAGCTTCAAATCGGTTAACAATTATCTAACAGA
TTATTTAAAAGATGACACACCTCCTAAAGAGGTGATCGATGCAGTAAAAT
CTAATAAGGTTTTGTATGACTTAATGATTGTACCATCAATCTGTCAAGGA
ATGTGTGAACTCATTGATAATAAACTGTTAACGGATGAAAACCTTCCCCA
AGATAATACGACCATGTTCACACTAATGTTCATATGCCGCCTCTGGAAAC
GCCAATTCAAAGAAGCGTCAACCCTGAACGGGATGTTTATAAAACCATCA
TTCAAAGAGTCTTGCATTAACTTAGCAACGGCTGTGTTTCACTTGGAAAC
TAGTAAGATGGTAGATTTTCAGCTGGAAGACTTGCCAGTGGAATCGAACA
TTGAGACTTTATTGGAGGCTGGTTTTATCATTAAACTAAACAATAACATT
GATAAACCTTATTCATTCAGTTATCAATTCTTACATcgtatttttaaaga
tttcctaTTGGCTTTATACGTTTTTTCGAATGGATTCACGAAAGAATCTA
AAACTATTATGAATAAGAACATACTGGTTATTCTTGGAGCATTTGCCGGT
GCTTCAGTACCAAATTCAACTTCTGACCCACACATGCAGAAATTCTGTCG
ACTTTTTAACAGTAATTTAACACTGGATGACATCTTACAATCATGTAATT
GCCACGATTCAGAGAAAATTCAAACATTGCGCGGATTTTTGAAATCGATT
AGAGACGATGATCATCATAAAAGCAAACAGTTAGGacaactgctgactca
gcacaataaaaacaaaacagaatcaCCGAAACGGAGTCCAAGAGATGAAA
AGTATGACGTCACACCTGTAATAAATGCTTTGATTTTATATGAATTCGga
tttcaaaactttaaagaAGTGACTCTATCGAAACCGGTGGCTATCGTGGG
TTCCGCTCTTAAACCTTACATGGATAATGAACTTCGAGATATGTTGAAAG
AATACATCAAACAGAAGAAAATTGTTATAAAGGGCAATAAGTAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_001727XLOC_001727Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00003107-proteinTCONS_00003107-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00003107-exon-sc0000025-1491911889:567476..568503TCONS_00003107-exon-sc0000025-1491911889:567476..568503Clytia hemisphaericaexon
TCONS_00003107-exon-sc0000025-1510915933:567476..568503TCONS_00003107-exon-sc0000025-1510915933:567476..568503Clytia hemisphaericaexon
TCONS_00003107-exon-sc0000025-1575043694:567476..568503TCONS_00003107-exon-sc0000025-1575043694:567476..568503Clytia hemisphaericaexon
TCONS_00003107-exon-sc0000025-1491911889:568954..571101TCONS_00003107-exon-sc0000025-1491911889:568954..571101Clytia hemisphaericaexon
TCONS_00003107-exon-sc0000025-1510915933:568954..571101TCONS_00003107-exon-sc0000025-1510915933:568954..571101Clytia hemisphaericaexon
TCONS_00003107-exon-sc0000025-1575043694:568954..571101TCONS_00003107-exon-sc0000025-1575043694:568954..571101Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000025supercontigsc0000025:567476..571101 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.251238 0.338151 0.58217 0.662963 0.0322506 0.0382272 0.33832 0.273821 0.352871 0.174782 0.242453 0.32671 1.09789 0.776978 0.353568 0.554102 0.22441 0.147208 1.07001 1.67614 0.254759 0.118833 0.891684 1.11014 1.60588 2.64869 0.229599 0.0525328 0.371756 0.378722
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR027417P-loop_NTPase
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00003107 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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