TCONS_00003017 (transcript) - C. hemisphaerica

Overview
NameTCONS_00003017
Unique NameTCONS_00003017
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length909

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00003017 ID=TCONS_00003017|Name=TCONS_00003017|organism=Clytia hemisphaerica|type=transcript|length=909bp
agaaaaaaaaacatgatgtCAAGTTGGATAAAGTCATTTATCATTTCTGC
GGTGGCATTTTTGATAGTTGAAGGAAAATTACGTTTCGTTGATTTGTCGT
TAAAATATGATGAGAAAAATACACCTTACTATGGTATCTATAAAAGCCAT
TTCAAGTTTCTTCAACAGGTTTCAGAACCATATCCAAAGTTTCAACTTGG
TTACAATGTTTTTAGTACGAATGAGCACGTGGGAACACACATTGATGCTC
CATTACACTTCGTTAAAGATGGACAGACTGTTGATCAGATACCTCTAGAA
AAATTAGTTGGTCCGCCGTATATAATTGACGTAGAGGCTGAGGTTGAAAA
GAATCGAAGTATGTACATTACAACCCAACATATAATGGATGCTGAGCAGA
AGCAGGGCAAAATTGAAAGTGGATCTATCTTATTGATACACACAGgtttt
agcAAGAGAGTTTCAAATTTTACTGACTATTATGGTGGCAACCATTCCGA
CCCATCAACTTATGATTTTCCTGGCATGACTGGGGAGGCTGCTCAATGGA
TCGTTGACAATCGAGAGATTGCCTCCTTTGGCGTCGACACGCCATCTTTC
GATCACGCCAAGGGCGCCGATGACTGGTATCCAGTGCATCGAGTTTTTCT
GAACAAAAACATCTCTGGATTCGAAAATATGGATTTGTCCAAAATCAATG
AATTTCGTGATAAGAAGGGCGTCTTGATTATCGCTCTTCCGATGAAAATT
GCGGGCGGAACGGGTGGACCCACCCGTATTGTTGCTATGTATGATGACTC
GGTGACAGTATCAGCCTCGTTTTCGTACTGCTATGTTGCTATGGTATCAA
TCATAGTCCCAGTCCTGGTTGCATTGGTTAATATGCTGTATTAAATGAAA
GATTCAAAT
Run BLAST on NCBI

protein sequence of TCONS_00003017-protein

>TCONS_00003017-protein ID=TCONS_00003017-protein|Name=TCONS_00003017-protein|organism=Clytia hemisphaerica|type=polypeptide|length=297bp
RKKNMMSSWIKSFIISAVAFLIVEGKLRFVDLSLKYDEKNTPYYGIYKSH
FKFLQQVSEPYPKFQLGYNVFSTNEHVGTHIDAPLHFVKDGQTVDQIPLE
KLVGPPYIIDVEAEVEKNRSMYITTQHIMDAEQKQGKIESGSILLIHTGF
SKRVSNFTDYYGGNHSDPSTYDFPGMTGEAAQWIVDNREIASFGVDTPSF
DHAKGADDWYPVHRVFLNKNISGFENMDLSKINEFRDKKGVLIIALPMKI
AGGTGGPTRIVAMYDDSVTVSASFSYCYVAMVSIIVPVLVALVNMLY
Run BLAST on NCBI

transcript from alignment at sc0000024:806339..811697-

Legend: exonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00003017 ID=TCONS_00003017|Name=TCONS_00003017|organism=Clytia hemisphaerica|type=transcript|length=5359bp|location=Sequence derived from alignment at sc0000024:806339..811697- (Clytia hemisphaerica)
AGAAAAAAAAACATGATGTCAAGTTGGATAAAGTCATTTATCATTTCTGC
GGTGGCATTTTTGATAGTTGAAGGAAAATTACGTTTCGTTGATTTGTCGT
TAAAATATGATGAGAAAAATACACCTTACTATGGTATCTATAAAAGCCAT
TTCAAGTTTCTTCAACAGGTAAAGGTCCATTTATCTAGAATGTGATTGCC
CTTCTCTTATCTGAGCCGCTCTTGTTGCCTGTGGGAGAGGGGCAACCATT
TTAGTGTCAACTATTTACATTCGACTGTCTTTAACTCGAAATTCTGTTAT
TCCAATCTTTCTGTAATTTGTACTAAAATATGTGGTCCCCTTAGCTAAAG
ACTATAGTAAATTACTCTCTGTAATTCGAATCTTTCTCTTATTCGAATAA
AATTTTTGGTTCCTTTAAGATCAAATTAAAAAGAGTGACTTATATATCCA
ATATGATAACTTTTATTTATCAATCTGACAGGTTTCAGAACCATATCCAA
AGTTTCAACTTGGTTACAATGTTTTTAGTACGAATGAGCACGTGGGAACA
CACATTGATGCTCCATTACACTTCGTTAAAGATGGACAGACTGTTGATCA
GATACCTCTAGAAAAATTAGTAAGTATACTTAATTACACATCTAAAAGAA
ATTTGCATTTTTGTTCAACTATACTCACTTCCCCTTCTCATAGAATCAGT
AGGATTTTCCCAGCTGATAATGGGAAAACTAACGGACTGAAACCCGGGAT
TGATAAATGCTTTTTATGGCTGGGATTTGAATTCCATTGTTTTCAAGTCA
CGAAATCTAGTTGGAATCGAAAATAGCATAATACTTTGCAGTGAGGATTT
GTATANCCTTAAAATCTTCTCTTTTTTAGTGATAAGCCATATAGACTACA
TCTGCTAAGACTTCGATCGAGCAACATCTCTAAATGCCAAGCAAACTGCA
GGAGAAGAATTCAGCCATGTGATGAATCGGTTGTCCCATCGTTCTGAGCC
AGTAGGTTTTTCAATTCATGTGGAAAAGAAAGGGAAGTGAAAGGTGGGGT
CTTATTCAAATGAAGATTGTTTAAAATAATTTGATTCCAGAAGATACGCT
TCTGTTGAGAGTTTTGATAACACTAGAATTGAAATTGACACAAAATCAAA
ATGGACCCATTACGCAATTCAGAATTTTATATTCCTGAAACTATATCCGG
GGGGCGGTATGTGCCGCCCTTAAGGGTACCTTTTTGAATTACTAAATTCC
CAGTAAGAGACAGAGAAGAGAAATAGGAAAATTTCAACTTTTTACTCCAG
GAAAGATCAAAATTTGGTCAAAGTTGTCTCAATAAGGGTCCTAAAATTCA
CAAAATGTTCCTTTGTTTTCTCCTTTTTAGTCCCGGTAAGGGTCCAAGGG
TCGAAAGTCAGGCGGCAACCCCCCGTCAGCTTGCAACCCAAGTACCCCTT
CCCCTGGAGCTATATAGAAGTTTCTCAATTTGTGAAGACCTTCTTTTCTC
GTTGTAAATGGCTATTTTTTAATATCTGAAGAAACTATGAATCAAAGTTT
TTATTTCTTTATTGCAACAAAGACACGTGTACACTACGAACATATATTAC
AAAACATTACTTAAACATAAGATAGAGTCCCTCCCCCGCTAGGAACTAAC
GTTATAGGTACTATACTATGTAAAAGAAAAGAAAAAAATAAATGAGTAAA
TTAAAAACAAAATCTTGGAGAAGGAAGCTACAATTGTTAGGTAAAAGCCT
AAAATAAAGCACCGCTAAACCTTCCAGCTTCGTTAAGAAATTCAACAACA
GAACAAAGAATAGATTTATTTAGATTTGAATTCAAACTTTCATCCCCATA
TAATAAAAGCCGACAGAAAAAAGGAGGGTTAAGCGGCGGATGAAAAATAA
TGCCTAGGGTCTGAAGTTTGTCGAACAAAGNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTATTTCTTA
CTTCCTATGTTTGGATCATTTAAAGAGTTGCCAAGACGAGAAAAATAACT
ATCCTTGGCAGTCTTGATGGCCAATCTGCACCTGTCAACCATGTTATCAA
GTGTCTGACCATCTAAAGGATTTCCCCATTTTCTCCAACGACGATTTACA
ACTGGGGACAACTGCTCATTCAGGAGATTTGAGTTGCAGTGCAGATGTAT
TCGCTGAGTACTGTAAACTGGCTGTGAATATAGAGACAGGGTAAGGCTGT
ATATGGACTGAAGGGAGATTAATTATCTTGATATGCTATTATTCAGGTTG
GTCCGCCGTATATAATTGACGTAGAGGCTGAGGTTGAAAAGAATCGAAGT
ATGTACATTACAACCCAACATATAATGGATGCTGAGCAGAAGCAGGGCAA
AATTGAAAGTGGATCTATCTTATTGATACACACAGGTTTGGATACAATTG
TTATAACTTTTCTCGTGGGTACTGGTAAAGTCGAAAATTCTACAGATATA
TCACCACGTTACTAACCGGCAAGTTGTCTAGCTTGACCCCCCTGCATCAA
TAGTTGTTTTTTAGCCTTTTTCACAAAATTTTATCTTCTAAGAGGTTCTA
CCCCAGATTTCCAGGGCAGGGCAGTATAATTTGTTCATCAAAATTTCCAG
GGAGAGTTGGTGTCGGTACTCCTGTTTGAATGTTGTTTTTTTTTGGAATA
ACCCATTAAACGAAGTCCAAAACTACATATTCTTAATGAGGTGGAGATCG
CCTACAATAAAGGTCATAATATTTTGATAATTTTGGTTATTTTAACGTTC
TTCAAGATTTAAAGTTCCGGCGAGAAAGTCGATTTTGGGCTATCTCTTTA
ATTTAATCGAATATTTCAATTCGGAAGGGGTTGGCAGACTTACAGGCTAT
ATTCTGAGCCTTATTGGACTATTTTTGAACTTTTGGATCCTCAGATCTTA
AGTTTCATATTAAAATTCAGAGTTAAAACTCTACCCTTCCAACCTACTTT
AGAGCATTTACAAATCGCTTGTGGTTCAAAAACTTCCCGGTGTATTTCCC
TCTTTTCTCAAATATTATGACCTTGATTGTAGCAAGAATTCAAATTTGTT
CGGCGTAATGGTTTGCTAAAATTTACTGTATTCTTGCTAGTCTAGCAGGA
CAGGCTATGCGTGATTAGGGCTATTAAAGGTTTTGTTTTGAATAAGACTG
ATATCGTTTGCTGGCTCATTAATTTTATAGTACAAGCTTTTTTATATTGA
ATTGACACGGATGTGGATCAGGATTGGTCAGAAAGAGAAAAAGAAAAACA
TTTTTCGCTTATATCAGCATAATATAACAATAGGCAGTCACTGTCCTGAT
ATGAAATATGTGTGTGATATCAGACGGAAACACTTATTCTAAAAATAAAA
CCTTAGATAAAACTTAAAAGTTTACTATTTGTGTCCTAATTTTCAGGTTT
TAGCAAGAGAGTTTCAAATTTTACTGACTATTATGGTGGCAACCATTCCG
ACCCATCAACTTATGATTTTCCTGGCATGACTGGGGAGGCTGCTCAATGG
ATCGTTGACAATCGAGAGGTATAACAGAGAACTTAGATATTCGTAATCTT
TGAACCCTAACCCAAGTGTTAACACAAATGCAAGGTCTTGACAGATCTCA
CTACAACCTCGCAAAAACATTGCGCAATGAGTATCATAGATTAACAAACT
TTCTCTCATATTTATAGATTGCCTCCTTTGGCGTCGACACGCCATCTTTC
GATCACGCCAAGGGCGCCGATGACTGGTATCCAGTGCATCGAGTTTTTCT
GAACAAAAACATCTCTGGATTCGAAAATATGGATTTGTCCAAAATCAATG
AATTTCGTGATAAGAAGGGCGTCTTGATTATCGCTCTTCCGATGAAAATT
GCGGGCGGAACGGGTGGACCCACCCGTATTGTTGCTATGTATGATGACTC
GGTGACAGTATCAGCCTCGTTTTCGTACTGCTATGTTGCTATGGTATCAA
TCATAGTCCCAGTCCTGGTTGCATTGGTTAATATGCTGTATTAAATGAAA
GATTCAAAT

Coding sequence (CDS) from alignment at sc0000024:806339..811697-

>TCONS_00003017 ID=TCONS_00003017|Name=TCONS_00003017|organism=Clytia hemisphaerica|type=CDS|length=4470bp|location=Sequence derived from alignment at sc0000024:806339..811697- (Clytia hemisphaerica)
ATTGCCTCCTTTGGCGTCGACACGCCATCTTTCGATCACGCCAAGGGCGC
CGATGACTGGTATCCAGTGCATCGAGTTTTTCTGAACAAAAACATCTCTG
GATTCGAAAATATGGATTTGTCCAAAATCAATGAATTTCGTGATAAGAAG
GGCGTCTTGATTATCGCTCTTCCGATGAAAATTGCGGGCGGAACGGGTGG
ACCCACCCGTATTGTTGCTATGTATGATGACTCGGTGACAGTATCAGCCT
CGTTTTCGTACTGCTATGTTGCTATGGTATCAATCATAGTCCCAGTCCTG
GTTGCATTGGTTAATATGCTGTATTAAGTTTTAGCAAGAGAGTTTCAAAT
TTTACTGACTATTATGGTGGCAACCATTCCGACCCATCAACTTATGATTT
TCCTGGCATGACTGGGGAGGCTGCTCAATGGATCGTTGACAATCGAGAGG
TTGGTCCGCCGTATATAATTGACGTAGAGGCTGAGGTTGAAAAGAATCGA
AGTATGTACATTACAACCCAACATATAATGGATGCTGAGCAGAAGCAGGG
CAAAATTGAAAGTGGATCTATCTTATTGATACACACAGGTTTCAGAACCA
TATCCAAAGTTTCAACTTGGTTACAATGTTTTTAGTACGAATGAGCACGT
GGGAACACACATTGATGCTCCATTACACTTCGTTAAAGATGGACAGACTG
TTGATCAGATACCTCTAGAAAAATTAAGAAAAAAAAACATGATGTCAAGT
TGGATAAAGTCATTTATCATTTCTGCGGTGGCATTTTTGATAGTTGAAGG
AAAATTACGTTTCGTTGATTTGTCGTTAAAATATGATGAGAAAAATACAC
CTTACTATGGTATCTATAAAAGCCATTTCAAGTTTCTTCAACAGATTGCC
TCCTTTGGCGTCGACACGCCATCTTTCGATCACGCCAAGGGCGCCGATGA
CTGGTATCCAGTGCATCGAGTTTTTCTGAACAAAAACATCTCTGGATTCG
AAAATATGGATTTGTCCAAAATCAATGAATTTCGTGATAAGAAGGGCGTC
TTGATTATCGCTCTTCCGATGAAAATTGCGGGCGGAACGGGTGGACCCAC
CCGTATTGTTGCTATGTATGATGACTCGGTGACAGTATCAGCCTCGTTTT
CGTACTGCTATGTTGCTATGGTATCAATCATAGTCCCAGTCCTGGTTGCA
TTGGTTAATATGCTGTATTAAGTTTTAGCAAGAGAGTTTCAAATTTTACT
GACTATTATGGTGGCAACCATTCCGACCCATCAACTTATGATTTTCCTGG
CATGACTGGGGAGGCTGCTCAATGGATCGTTGACAATCGAGAGGTTGGTC
CGCCGTATATAATTGACGTAGAGGCTGAGGTTGAAAAGAATCGAAGTATG
TACATTACAACCCAACATATAATGGATGCTGAGCAGAAGCAGGGCAAAAT
TGAAAGTGGATCTATCTTATTGATACACACAGGTTTCAGAACCATATCCA
AAGTTTCAACTTGGTTACAATGTTTTTAGTACGAATGAGCACGTGGGAAC
ACACATTGATGCTCCATTACACTTCGTTAAAGATGGACAGACTGTTGATC
AGATACCTCTAGAAAAATTAAGAAAAAAAAACATGATGTCAAGTTGGATA
AAGTCATTTATCATTTCTGCGGTGGCATTTTTGATAGTTGAAGGAAAATT
ACGTTTCGTTGATTTGTCGTTAAAATATGATGAGAAAAATACACCTTACT
ATGGTATCTATAAAAGCCATTTCAAGTTTCTTCAACAGATTGCCTCCTTT
GGCGTCGACACGCCATCTTTCGATCACGCCAAGGGCGCCGATGACTGGTA
TCCAGTGCATCGAGTTTTTCTGAACAAAAACATCTCTGGATTCGAAAATA
TGGATTTGTCCAAAATCAATGAATTTCGTGATAAGAAGGGCGTCTTGATT
ATCGCTCTTCCGATGAAAATTGCGGGCGGAACGGGTGGACCCACCCGTAT
TGTTGCTATGTATGATGACTCGGTGACAGTATCAGCCTCGTTTTCGTACT
GCTATGTTGCTATGGTATCAATCATAGTCCCAGTCCTGGTTGCATTGGTT
AATATGCTGTATTAAGTTTTAGCAAGAGAGTTTCAAATTTTACTGACTAT
TATGGTGGCAACCATTCCGACCCATCAACTTATGATTTTCCTGGCATGAC
TGGGGAGGCTGCTCAATGGATCGTTGACAATCGAGAGGTTGGTCCGCCGT
ATATAATTGACGTAGAGGCTGAGGTTGAAAAGAATCGAAGTATGTACATT
ACAACCCAACATATAATGGATGCTGAGCAGAAGCAGGGCAAAATTGAAAG
TGGATCTATCTTATTGATACACACAGGTTTCAGAACCATATCCAAAGTTT
CAACTTGGTTACAATGTTTTTAGTACGAATGAGCACGTGGGAACACACAT
TGATGCTCCATTACACTTCGTTAAAGATGGACAGACTGTTGATCAGATAC
CTCTAGAAAAATTAAGAAAAAAAAACATGATGTCAAGTTGGATAAAGTCA
TTTATCATTTCTGCGGTGGCATTTTTGATAGTTGAAGGAAAATTACGTTT
CGTTGATTTGTCGTTAAAATATGATGAGAAAAATACACCTTACTATGGTA
TCTATAAAAGCCATTTCAAGTTTCTTCAACAGATTGCCTCCTTTGGCGTC
GACACGCCATCTTTCGATCACGCCAAGGGCGCCGATGACTGGTATCCAGT
GCATCGAGTTTTTCTGAACAAAAACATCTCTGGATTCGAAAATATGGATT
TGTCCAAAATCAATGAATTTCGTGATAAGAAGGGCGTCTTGATTATCGCT
CTTCCGATGAAAATTGCGGGCGGAACGGGTGGACCCACCCGTATTGTTGC
TATGTATGATGACTCGGTGACAGTATCAGCCTCGTTTTCGTACTGCTATG
TTGCTATGGTATCAATCATAGTCCCAGTCCTGGTTGCATTGGTTAATATG
CTGTATTAAGTTTTAGCAAGAGAGTTTCAAATTTTACTGACTATTATGGT
GGCAACCATTCCGACCCATCAACTTATGATTTTCCTGGCATGACTGGGGA
GGCTGCTCAATGGATCGTTGACAATCGAGAGGTTGGTCCGCCGTATATAA
TTGACGTAGAGGCTGAGGTTGAAAAGAATCGAAGTATGTACATTACAACC
CAACATATAATGGATGCTGAGCAGAAGCAGGGCAAAATTGAAAGTGGATC
TATCTTATTGATACACACAGGTTTCAGAACCATATCCAAAGTTTCAACTT
GGTTACAATGTTTTTAGTACGAATGAGCACGTGGGAACACACATTGATGC
TCCATTACACTTCGTTAAAGATGGACAGACTGTTGATCAGATACCTCTAG
AAAAATTAAGAAAAAAAAACATGATGTCAAGTTGGATAAAGTCATTTATC
ATTTCTGCGGTGGCATTTTTGATAGTTGAAGGAAAATTACGTTTCGTTGA
TTTGTCGTTAAAATATGATGAGAAAAATACACCTTACTATGGTATCTATA
AAAGCCATTTCAAGTTTCTTCAACAGATTGCCTCCTTTGGCGTCGACACG
CCATCTTTCGATCACGCCAAGGGCGCCGATGACTGGTATCCAGTGCATCG
AGTTTTTCTGAACAAAAACATCTCTGGATTCGAAAATATGGATTTGTCCA
AAATCAATGAATTTCGTGATAAGAAGGGCGTCTTGATTATCGCTCTTCCG
ATGAAAATTGCGGGCGGAACGGGTGGACCCACCCGTATTGTTGCTATGTA
TGATGACTCGGTGACAGTATCAGCCTCGTTTTCGTACTGCTATGTTGCTA
TGGTATCAATCATAGTCCCAGTCCTGGTTGCATTGGTTAATATGCTGTAT
TAAGTTTTAGCAAGAGAGTTTCAAATTTTACTGACTATTATGGTGGCAAC
CATTCCGACCCATCAACTTATGATTTTCCTGGCATGACTGGGGAGGCTGC
TCAATGGATCGTTGACAATCGAGAGGTTGGTCCGCCGTATATAATTGACG
TAGAGGCTGAGGTTGAAAAGAATCGAAGTATGTACATTACAACCCAACAT
ATAATGGATGCTGAGCAGAAGCAGGGCAAAATTGAAAGTGGATCTATCTT
ATTGATACACACAGGTTTCAGAACCATATCCAAAGTTTCAACTTGGTTAC
AATGTTTTTAGTACGAATGAGCACGTGGGAACACACATTGATGCTCCATT
ACACTTCGTTAAAGATGGACAGACTGTTGATCAGATACCTCTAGAAAAAT
TAAGAAAAAAAAACATGATGTCAAGTTGGATAAAGTCATTTATCATTTCT
GCGGTGGCATTTTTGATAGTTGAAGGAAAATTACGTTTCGTTGATTTGTC
GTTAAAATATGATGAGAAAAATACACCTTACTATGGTATCTATAAAAGCC
ATTTCAAGTTTCTTCAACAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_001650XLOC_001650Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00003017-proteinTCONS_00003017-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00003017-exon-sc0000024-1575043694:811530..811697TCONS_00003017-exon-sc0000024-1575043694:811530..811697Clytia hemisphaericaexon
TCONS_00003017-exon-sc0000024-1575043694:811079..811216TCONS_00003017-exon-sc0000024-1575043694:811079..811216Clytia hemisphaericaexon
TCONS_00003017-exon-sc0000024-1575043694:807963..808101TCONS_00003017-exon-sc0000024-1575043694:807963..808101Clytia hemisphaericaexon
TCONS_00003017-exon-sc0000024-1575043694:806830..806951TCONS_00003017-exon-sc0000024-1575043694:806830..806951Clytia hemisphaericaexon
TCONS_00003017-exon-sc0000024-1575043694:806339..806680TCONS_00003017-exon-sc0000024-1575043694:806339..806680Clytia hemisphaericaexon
TCONS_00003017-exon-sc0000024-1510915933:811530..811697TCONS_00003017-exon-sc0000024-1510915933:811530..811697Clytia hemisphaericaexon
TCONS_00003017-exon-sc0000024-1510915933:811079..811216TCONS_00003017-exon-sc0000024-1510915933:811079..811216Clytia hemisphaericaexon
TCONS_00003017-exon-sc0000024-1510915933:807963..808101TCONS_00003017-exon-sc0000024-1510915933:807963..808101Clytia hemisphaericaexon
TCONS_00003017-exon-sc0000024-1510915933:806830..806951TCONS_00003017-exon-sc0000024-1510915933:806830..806951Clytia hemisphaericaexon
TCONS_00003017-exon-sc0000024-1510915933:806339..806680TCONS_00003017-exon-sc0000024-1510915933:806339..806680Clytia hemisphaericaexon
TCONS_00003017-exon-sc0000024-1491911889:811530..811697TCONS_00003017-exon-sc0000024-1491911889:811530..811697Clytia hemisphaericaexon
TCONS_00003017-exon-sc0000024-1491911889:811079..811216TCONS_00003017-exon-sc0000024-1491911889:811079..811216Clytia hemisphaericaexon
TCONS_00003017-exon-sc0000024-1491911889:807963..808101TCONS_00003017-exon-sc0000024-1491911889:807963..808101Clytia hemisphaericaexon
TCONS_00003017-exon-sc0000024-1491911889:806830..806951TCONS_00003017-exon-sc0000024-1491911889:806830..806951Clytia hemisphaericaexon
TCONS_00003017-exon-sc0000024-1491911889:806339..806680TCONS_00003017-exon-sc0000024-1491911889:806339..806680Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000024supercontigsc0000024:806339..811697 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
7.14623	7.85832	3.78743	1.67233	0	1.40425	1.82449	1.81708	1.27219	0.787905	0.76476	2.59908	6.40439	9.17141	28.6397	10.5152	22.7902	42.6945	1.99343	2.31147	1.91111	2.12022	0.865491	2.98388	8.91489	7.18756	0	0	1.67563	0.853606
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR007325KFase
Vocabulary: Biological Process
TermDefinition
GO:0019441tryptophan catabolic process to kynurenine
Vocabulary: Molecular Function
TermDefinition
GO:0004061arylformamidase activity
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0019441 tryptophan catabolic process to kynurenine
molecular_function GO:0004061 arylformamidase activity
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00003017 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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