TCONS_00002926 (transcript) - C. hemisphaerica

Overview
NameTCONS_00002926
Unique NameTCONS_00002926
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length765

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00002926 ID=TCONS_00002926|Name=TCONS_00002926|organism=Clytia hemisphaerica|type=transcript|length=765bp
attttaggtgttctaataaaaaaaaatgtgtatgtcGTGGCAGATGCATG
ACCTTGGAGTGactgaatgttttgaaataattattaaaTTTACTTTTACG
TACCTTTTTTTTTATGGATCTGCTTTCTGAAAGAAGTTTAAATGGCACTT
TAGTGTCAGGGTTGAATGGTATTGTTGTTGCTTCACAGAATGTGTATTGG
GAgtgatagaatttttttttaattattgttTTACTTGATGAAGTACTAAG
TACAAAGATGTGTATGGCtcttttttgtatattttatcaaaagttttaat
GTTCTGTCACTTAAGGGTTAGTGATTTGAATTCAGCAATAATGTCGatta
gttttttatttcttaagATAGCGAAACAGTTACAAATGTCCAGACGGTCG
TAATCAATAAAATCGATCATCGATTAGAATCGATAAGCTCATTGATATTT
ATCGATGAATTagatactgtcaactgctctaacttcgGACGATTGGTCAA
TCacgggactggttgatatctggcctgtattttcacttactgtttatttt
gataaccaagtttatcaatcatatatACTTCTTCGTTCCCCTTAAAGTGC
ACAGTTTAgcttttttttatgttttcaatTATTTGTTCGTTGTAACATCC
CTTTTTGACGTGGGTTTGATTGATATGCAGGGCTAATTTGTCCTTTCTTC
TTGGCTGATTTTAACTTTAACTTCAATCATGGGGACTGAGCCTTTACTAG
AACCTTTATGCCATA
Run BLAST on NCBI

transcript from alignment at sc0000023:524014..524778

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00002926 ID=TCONS_00002926|Name=TCONS_00002926|organism=Clytia hemisphaerica|type=transcript|length=765bp|location=Sequence derived from alignment at sc0000023:524014..524778 (Clytia hemisphaerica)
TATGGCATAAAGGTTCTAGTAAAGGCTCAGTCCCCATGATTGAAGTTAAA
GTTAAAATCAGCCAAGAAGAAAGGACAAATTAGCCCTGCATATCAATCAA
ACCCACGTCAAAAAGGGATGTTACAACGAACAAATAattgaaaacataaa
aaaaagcTAAACTGTGCACTTTAAGGGGAACGAAGAAGTatatatgattg
ataaacttggttatcaaaataaacagtaagtgaaaatacaggccagatat
caaccagtcccgtGATTGACCAATCGTCcgaagttagagcagttgacagt
atctAATTCATCGATAAATATCAATGAGCTTATCGATTCTAATCGATGAT
CGATTTTATTGATTACGACCGTCTGGACATTTGTAACTGTTTCGCTATct
taagaaataaaaaactaatCGACATTATTGCTGAATTCAAATCACTAACC
CTTAAGTGACAGAACattaaaacttttgataaaatatacaaaaaagaGCC
ATACACATCTTTGTACTTAGTACTTCATCAAGTAAaacaataattaaaaa
aaaattctatcacTCCCAATACACATTCTGTGAAGCAACAACAATACCAT
TCAACCCTGACACTAAAGTGCCATTTAAACTTCTTTCAGAAAGCAGATCC
ATAAAAAAAAAGGTACGTAAAAGTAAAtttaataattatttcaaaacatt
cagtCACTCCAAGGTCATGCATCTGCCACgacatacacatttttttttat
tagaacacctaaaat
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_001599XLOC_001599Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00002926-exon-sc0000023-1491911889:524014..524778TCONS_00002926-exon-sc0000023-1491911889:524014..524778Clytia hemisphaericaexon
TCONS_00002926-exon-sc0000023-1510915933:524014..524778TCONS_00002926-exon-sc0000023-1510915933:524014..524778Clytia hemisphaericaexon
TCONS_00002926-exon-sc0000023-1575043694:524014..524778TCONS_00002926-exon-sc0000023-1575043694:524014..524778Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000023supercontigsc0000023:524014..524778 .
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
1.8857	1.92894	1.85643	1.21113	0.0860499	0.34185	0	0.231313	0.162451	0.0666035	0.517176	0.343991	0.381936	0.220358	0.0724656	0.116871	0	0.0490971	0	0	0	0.0910235	0	0.200038	0.0685088	0.48914	0.0896924	0.191147	0	0.217586
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00002926 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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