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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00002922 ID=TCONS_00002922|Name=TCONS_00002922|organism=Clytia hemisphaerica|type=transcript|length=1218bp
tttcgaaGGTTTTCATTTCTCACAACATTGATACAACATCAATGAAATGT
TTTAATCTAATTTTCATCTTTTACAAATATCTTCTTTTATCATTTCTATA
AGATCGTTaaaattttcgaatgttttcattttcacaacATTGATACAACA
TTAATGAAATGTTTTAAtctaatttttgtattttacaaatatcttcgttC
ATCATTTCTATAAGATCATCCATTGattcaaatgttttcattttcacagc
ATTTAGACAAAATAGGGGGTTCAAAGATGCAAATCGGTAATATAATGTTT
GATGTTAGGTTCTGAAAGTAATTTACAATCTTCATCGCTTGGTCTCCAGT
CCTCATCTTGGATATGGAGAGAAACAGCATCACTGTCTATTGGTTTTCTA
ACATTCGTCATCAAATCAGGGCCAAACAtttcatttatcatttttttaac
aaaatgtgAATAACTGTCAAATGGCGTGATGATGATCCTCAACggttgtt
tctttttaatttcacgTAAAGCGTTCACTTTTTTAAATAAGGCAACAAAA
TATGGAAAATAAACATCCTGAGGGAAGTGTGTGTAGATATTGATCATATT
TATTCCAGTCATGCAAGTTTCATTAAACAGGGCATCTCTTGAAAGAAGGT
ATTGGTGCATGTATTCATATCGGTCGAAATCTGGCTCTTTTATCACATCA
AGTAGATTTTTAAGCAAGATATTCTTTGTCTCTACAGTATACTTAAAATT
ATCGGGaagaaaaaatgagaataaaAACCGATTGATCGGCAACCAATTTG
GAAGATCACAGAAACTTTGACAGTAAAGAATGATATTCCAAAACTGATCA
TCTTGAAGTCCTTGCAACATTTGAAACTCTTCTTCAGAATCATAATCTGC
ATATGAATAGACCAATGTTTGTTTGACAGTGTTGTTCCCCATCACTTGTT
CATAATAAAGACGcttcaagaaatttttcaaatcgttGTAAGGAATACTC
TTTGAAACAGAGCGGTTTGTTAGAGGGAAATTCCATTCGAATTGATTGAC
ATTGAAGTTTGGCCGCCATTGGACAACAAATCTATCACTCGGGAGGTATA
CATTGATGGTGAAGCAATCTTCGTTCCGTGTCAAAGGCTCTAAACGATGC
AAGAGGTCatccaaaaatttcatttcaatccaATCTGCAATAATGGTTAT
ATTATTTGTTTGTGGGCA Run BLAST on NCBI protein sequence of TCONS_00002922-protein >TCONS_00002922-protein ID=TCONS_00002922-protein|Name=TCONS_00002922-protein|organism=Clytia hemisphaerica|type=polypeptide|length=315bp
CPQTNNITIIADWIEMKFLDDLLHRLEPLTRNEDCFTINVYLPSDRFVVQ
WRPNFNVNQFEWNFPLTNRSVSKSIPYNDLKNFLKRLYYEQVMGNNTVKQ
TLVYSYADYDSEEEFQMLQGLQDDQFWNIILYCQSFCDLPNWLPINRFLF
SFFLPDNFKYTVETKNILLKNLLDVIKEPDFDRYEYMHQYLLSRDALFNE
TCMTGINMINIYTHFPQDVYFPYFVALFKKVNALREIKKKQPLRIIITPF
DSYSHFVKKMINEMFGPDLMTNVRKPIDSDAVSLHIQDEDWRPSDEDCKL
LSEPNIKHYITDLHL Run BLAST on NCBI transcript from alignment at sc0000023:474939..476156 Legend: exonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00002922 ID=TCONS_00002922|Name=TCONS_00002922|organism=Clytia hemisphaerica|type=transcript|length=1218bp|location=Sequence derived from alignment at sc0000023:474939..476156 (Clytia hemisphaerica)
TGCCCACAAACAAATAATATAACCATTATTGCAGATtggattgaaatgaa
atttttggatGACCTCTTGCATCGTTTAGAGCCTTTGACACGGAACGAAG
ATTGCTTCACCATCAATGTATACCTCCCGAGTGATAGATTTGTTGTCCAA
TGGCGGCCAAACTTCAATGTCAATCAATTCGAATGGAATTTCCCTCTAAC
AAACCGCTCTGTTTCAAAGAGTATTCCTTACaacgatttgaaaaatttct
tgaagCGTCTTTATTATGAACAAGTGATGGGGAACAACACTGTCAAACAA
ACATTGGTCTATTCATATGCAGATTATGATTCTGAAGAAGAGTTTCAAAT
GTTGCAAGGACTTCAAGATGATCAGTTTTGGAATATCATTCTTTACTGTC
AAAGTTTCTGTGATCTTCCAAATTGGTTGCCGATCAATCGGTTtttattc
tcattttttcttCCCGATAATTTTAAGTATACTGTAGAGACAAAGAATAT
CTTGCTTAAAAATCTACTTGATGTGATAAAAGAGCCAGATTTCGACCGAT
ATGAATACATGCACCAATACCTTCTTTCAAGAGATGCCCTGTTTAATGAA
ACTTGCATGACTGGAATAAATATGATCAATATCTACACACACTTCCCTCA
GGATGTTTATTTTCCATATTTTGTTGCCTTATTTAAAAAAGTGAACGCTT
TAcgtgaaattaaaaagaaacaaccGTTGAGGATCATCATCACGCCATTT
GACAGTTATTcacattttgttaaaaaaatgataaatgaaaTGTTTGGCCC
TGATTTGATGACGAATGTTAGAAAACCAATAGACAGTGATGCTGTTTCTC
TCCATATCCAAGATGAGGACTGGAGACCAAGCGATGAAGATTGTAAATTA
CTTTCAGAACCTAACATCAAACATTATATTACCGATTTGCATCTTTGAAC
CCCCTATTTTGTCTAAATgctgtgaaaatgaaaacatttgaatCAATGGA
TGATCTTATAGAAATGATGaacgaagatatttgtaaaatacaaaaattag
aTTAAAACATTTCATTAATGTTGTATCAATgttgtgaaaatgaaaacatt
cgaaaattttAACGATCTTATAGAAATGATAAAAGAAGATATTTGTAAAA
GATGAAAATTAGATTAAAACATTTCATTGATGTTGTATCAATGTTGTGAG
AAATGAAAACCttcgaaa Coding sequence (CDS) from alignment at sc0000023:474939..476156 >TCONS_00002922 ID=TCONS_00002922|Name=TCONS_00002922|organism=Clytia hemisphaerica|type=CDS|length=948bp|location=Sequence derived from alignment at sc0000023:474939..476156 (Clytia hemisphaerica)
TGCCCACAAACAAATAATATAACCATTATTGCAGATtggattgaaatgaa
atttttggatGACCTCTTGCATCGTTTAGAGCCTTTGACACGGAACGAAG
ATTGCTTCACCATCAATGTATACCTCCCGAGTGATAGATTTGTTGTCCAA
TGGCGGCCAAACTTCAATGTCAATCAATTCGAATGGAATTTCCCTCTAAC
AAACCGCTCTGTTTCAAAGAGTATTCCTTACaacgatttgaaaaatttct
tgaagCGTCTTTATTATGAACAAGTGATGGGGAACAACACTGTCAAACAA
ACATTGGTCTATTCATATGCAGATTATGATTCTGAAGAAGAGTTTCAAAT
GTTGCAAGGACTTCAAGATGATCAGTTTTGGAATATCATTCTTTACTGTC
AAAGTTTCTGTGATCTTCCAAATTGGTTGCCGATCAATCGGTTtttattc
tcattttttcttCCCGATAATTTTAAGTATACTGTAGAGACAAAGAATAT
CTTGCTTAAAAATCTACTTGATGTGATAAAAGAGCCAGATTTCGACCGAT
ATGAATACATGCACCAATACCTTCTTTCAAGAGATGCCCTGTTTAATGAA
ACTTGCATGACTGGAATAAATATGATCAATATCTACACACACTTCCCTCA
GGATGTTTATTTTCCATATTTTGTTGCCTTATTTAAAAAAGTGAACGCTT
TAcgtgaaattaaaaagaaacaaccGTTGAGGATCATCATCACGCCATTT
GACAGTTATTcacattttgttaaaaaaatgataaatgaaaTGTTTGGCCC
TGATTTGATGACGAATGTTAGAAAACCAATAGACAGTGATGCTGTTTCTC
TCCATATCCAAGATGAGGACTGGAGACCAAGCGATGAAGATTGTAAATTA
CTTTCAGAACCTAACATCAAACATTATATTACCGATTTGCATCTTTGA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00002922-exon-sc0000023-1491911889:474939..476156 | TCONS_00002922-exon-sc0000023-1491911889:474939..476156 | Clytia hemisphaerica | exon |
| TCONS_00002922-exon-sc0000023-1510915933:474939..476156 | TCONS_00002922-exon-sc0000023-1510915933:474939..476156 | Clytia hemisphaerica | exon |
| TCONS_00002922-exon-sc0000023-1575043694:474939..476156 | TCONS_00002922-exon-sc0000023-1575043694:474939..476156 | Clytia hemisphaerica | exon |
The following polypeptide feature(s) derives from this transcript:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000023 | supercontig | sc0000023:474939..476156 . |
Blast
The following BLAST results are available for this feature:
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